CmaCh19G003830 (gene) Cucurbita maxima (Rimu)

Overview
NameCmaCh19G003830
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu))
DescriptionCytochrome c oxidase subunit 3
LocationCma_Chr19 : 4374686 .. 4377479 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTTATCGTATCGGAGGTTATGTTCCTTTTTGCTTTTTTTCGGGCTTCTTCTCATTCTTCTTTGGCACCCACGGTAGAGATCGGAGGTATTTGGCCCCCAAAAGGGATTGGGGTTTTAGATCCTAGGGAAATCCCTTTTCTTAATACCCCTATTCTCCTTTCATCCGGAGCTGCCGTAACTTGGGCTCATCATGCTATACTCGCGGGGAAGGAAAAACGAGCTGTTTACGCTTTAGTAGCTACCGTTTCACTGGCTCTAGTATTCACAGGCTTTCAAGGAATGGAATATTATCAAGCACCCTTCACTATTTTGGATAGTATTTATGGTTCTACCTTTTTCTCAGCAACGGGCTTTCATGGTTTTCATGTGATTATAGGTACTCTTTTCTTGATCATATGTGGTATTCGCCAATATCTTGGTCATCTGACTAAGGAGCATCACGTTGGCTTTGAAGCAGCTGCATGGTACTGGCATTTTGTAGACGTGGTTCGGTTATTCCTATTTATCTCTATCTATTGGTGGGGAGGTATATGAAAGAACAAAACAGTGCATTGAGGAATTCAAGCTTGAAGACAAAAAGAACCGGGCTTTTCCAAAGAATTACAGCAGCTTTCCTTCTTCCTTTAATTATTATATACAAAAAAGTCTCTTCCACTTTCCTACCAAATCTTTCTGTAGTCTGGCACATAAATTCAGGGATCGAAGAGATTATGGCAGATCATGTTCACCAAGAAATGACCCGAAATTGGATCTTAGTCTATTTGAGATTGTTCCTTTTAATCGTAATCAAAGATGTTTTCTTCTCTCTCATTTCTTTTCCGAATAAATCGAAGAACCTAATGGATCGAACTCATCCTTCCTTGGCTGCTATGAAATATATTGCCCTTGCGTTGCGGAAGGAACGTTCTCTTCTCTTTTGAGTTTCAGGCAAGAGCTCTTTCTTCAATAAAGGGTTGGAACTCTCATCTTTCCCCGGGAAGAATATGGTATGGGCTTGTTGAAGCTATGAAGCATCTTAGAGTATTCCATTCCGTTTTTCAGCTGGATCCGGGCTTGGTTTGACCTGAAAAAACGGCGATTTAGTAGAGAGAGAGAGAGGTTTGCGAAAGAAAGGCAATCAACGTAGTAGTATATAGATAGAGTGAGTGTGCAGGGTGTAGGTATACCACTTACGAGAAAGAACCCCAAGTAAGTAAAGTAGTTAACCAAAGACAAGTAAGTAGTTCGTCAGTCCTCCGACGCCTCCCGTTCATTTTCATTCTTTCTTTCTTTCATGTTTTTTGTTTTGTTTCTTCATAGGTCCCAAGCCCTTCTTATCAAGCCCTCCTTAAGTCAAAAAAAAAAAAAATGCTGCTTTATTTGAACGAACATTGTAAGAACCTTTCTAACTGACATCCCAGTCATAATGCCACCCACGTCTTTTTTAACAAAGACTTTTTTGTCTTTTTGATTTGAGTTAATAATAAATAAATAACTGGCAGGTTTCATTAATGAAAAGAAAAGCGGAGGCCCGCCATCTGCTAGCATTGTGGTTTGGAATCGATTCTTTATCAATGTCCCACCCTTTCTTTGAACCTTGTCAATGATCGAACTTAAAGATATGAACTGAGTGCCATTTGATGAGTAACTGAGAACAAGGGAGAGGGATATGGAAAGGATGAAGTAATGAAAGAGGAAATCATTGCTAGTAGTAACGACTTGTCACGATCCATTGGTTCATATAGAATCCATGTCCTAGGTGTATCAAAAAACATGATTTTCCCTAAGCGTATATAATAAAATAGAGTGAAAGGGTACACCCCGAAACCAAGGGCGTACTAACTAAGAGCTGAGTCCTCTCCGAACCGCAAGAGATAGTTTCCCATCATACGGCTCACCAACTTCACTTGCCTCTATGGGAAGCTCGCTCCGGGCAGGTTCGGATCACTTACAATACACGGCTCTACGAAGGAAGGGCTTGGTGGGTTAGTAACGCGTTTTCAATATGATGATTTTTCCGTATTTGTTTGATGAGAAATGCGAGACGAAAAAGGAACTCATCTTTTCGACTGGGAAATGCAAGTCTGTTTTGTCCACTTTCTCCATCCCCCTCTATCAAAATAAAAAAAAAGGCGAGCTTGCTTCTTATTCCCGTGTTCGATCTCTTCCATCTCTGCCTCGCTCATTGTCACTTATGTTGAAGAAAGGTTTGGAACCCTGTAGAGAATGAAGAGGGGCCAAGCATCTTCCTCTCAACAGTGCTTCTTGAGGCTCCACTCTCCCCGTAAGGCCCCGTTAGCCTGGGCGAGGGGATAAGGAATAAGGATTGAATGAAGCCCCCTTCCTTAGCTCTACCAGGGACTGTACAGGGGTTAGCTTTGTAAATGTGTAGAGCCAAGTGTAGTGTGGTGTAGTAGTAAGCACTTCTAGGCCCCTTCCCGGCTACATGATGACTCTAGTGCTTTGACTCTAGTGCTTTGACTCCAGTGCTTGGGTTGTCCTTGGCAAATCCTTAGAGCATTATAAGCGAGCTTCCATCTCTCCTAGCCAAAGACGCCTTATTCTCTTTGACTTTGCTTTCTCAATTCTAGCTTTGAGCCCTTCCCTTTGACTTCCTTATTTAACTTAATGCTTTAAAAGGCCAACCATTGAGCCTAGCGCTAAAGCCCTATTGCACCTAACCACGAAAGTCTCCCATATTTCAGCGGAGCCAACACTCCGCCTGGAGGACAACCACCAACTTCCTACAGTACACCCTTATCTGTCCGGGGCACGCACCTACATTCAGCCATGTGAGCGCGTCACCAGATAG

mRNA sequence

ATGTTTATCGTATCGGAGGTTATGTTCCTTTTTGCTTTTTTTCGGGCTTCTTCTCATTCTTCTTTGGCACCCACGGTAGAGATCGGAGGTATTTGGCCCCCAAAAGGGATTGGGGTTTTAGATCCTAGGGAAATCCCTTTTCTTAATACCCCTATTCTCCTTTCATCCGGAGCTGCCGTAACTTGGGCTCATCATGCTATACTCGCGGGGAAGGAAAAACGAGCTGTTTACGCTTTAGTAGCTACCGTTTCACTGGCTCTAGTATTCACAGGCTTTCAAGGAATGGAATATTATCAAGCACCCTTCACTATTTTGGATAGTATTTATGGTTCTACCTTTTTCTCAGCAACGGGCTTTCATGGTTTTCATGTGATTATAGGTACTCTTTTCTTGATCATATGTGGTATTCGCCAATATCTTGGTCATCTGACTAAGGAGCATCACGTTGGCTTTGAAGCAGCTGCATGGTACTGGCATTTTGTAGACGTGGTTCGGTTATTCCTATTTATCTCTATCTATTGGTGGGGAGGGATCGAAGAGATTATGGCAGATCATGTTCACCAAGAAATGACCCGAAATTGGATCTTAGTCTATTTGAGATTGCCAACCATTGAGCCTAGCGCTAAAGCCCTATTGCACCTAACCACGAAAGTCTCCCATATTTCAGCGGAGCCAACACTCCGCCTGGAGGACAACCACCAACTTCCTACAGTACACCCTTATCTGTCCGGGGCACGCACCTACATTCAGCCATGTGAGCGCGTCACCAGATAG

Coding sequence (CDS)

ATGTTTATCGTATCGGAGGTTATGTTCCTTTTTGCTTTTTTTCGGGCTTCTTCTCATTCTTCTTTGGCACCCACGGTAGAGATCGGAGGTATTTGGCCCCCAAAAGGGATTGGGGTTTTAGATCCTAGGGAAATCCCTTTTCTTAATACCCCTATTCTCCTTTCATCCGGAGCTGCCGTAACTTGGGCTCATCATGCTATACTCGCGGGGAAGGAAAAACGAGCTGTTTACGCTTTAGTAGCTACCGTTTCACTGGCTCTAGTATTCACAGGCTTTCAAGGAATGGAATATTATCAAGCACCCTTCACTATTTTGGATAGTATTTATGGTTCTACCTTTTTCTCAGCAACGGGCTTTCATGGTTTTCATGTGATTATAGGTACTCTTTTCTTGATCATATGTGGTATTCGCCAATATCTTGGTCATCTGACTAAGGAGCATCACGTTGGCTTTGAAGCAGCTGCATGGTACTGGCATTTTGTAGACGTGGTTCGGTTATTCCTATTTATCTCTATCTATTGGTGGGGAGGGATCGAAGAGATTATGGCAGATCATGTTCACCAAGAAATGACCCGAAATTGGATCTTAGTCTATTTGAGATTGCCAACCATTGAGCCTAGCGCTAAAGCCCTATTGCACCTAACCACGAAAGTCTCCCATATTTCAGCGGAGCCAACACTCCGCCTGGAGGACAACCACCAACTTCCTACAGTACACCCTTATCTGTCCGGGGCACGCACCTACATTCAGCCATGTGAGCGCGTCACCAGATAG

Protein sequence

MFIVSEVMFLFAFFRASSHSSLAPTVEIGGIWPPKGIGVLDPREIPFLNTPILLSSGAAVTWAHHAILAGKEKRAVYALVATVSLALVFTGFQGMEYYQAPFTILDSIYGSTFFSATGFHGFHVIIGTLFLIICGIRQYLGHLTKEHHVGFEAAAWYWHFVDVVRLFLFISIYWWGGIEEIMADHVHQEMTRNWILVYLRLPTIEPSAKALLHLTTKVSHISAEPTLRLEDNHQLPTVHPYLSGARTYIQPCERVTR
Homology
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BLAST of CmaCh19G003830 vs. Swiss-Prot
Match: COX3_VICFA (Cytochrome c oxidase subunit 3 OS=Vicia faba GN=COX3 PE=3 SV=1)

HSP 1 Score: 349.7 bits (896), Expect = 2.6e-95
Identity = 171/177 (96.61%), Postives = 173/177 (97.74%), Query Frame = 1 

Query: 2   FIVSEVMFLFAFFRASSHSSLAPTVEIGGIWPPKGIGVLDPREIPFLNTPILLSSGAAVT 61
           FIVSEVMFLFAFFRASSHSSLAPTVEIGGIWPPKGIGVLDPREIPFLNTPILLSSGAAVT
Sbjct: 89  FIVSEVMFLFAFFRASSHSSLAPTVEIGGIWPPKGIGVLDPREIPFLNTPILLSSGAAVT 148

Query: 62  WAHHAILAGKEKRAVYALVATVSLALVFTGFQGMEYYQAPFTILDSIYGSTFFSATGFHG 121
           WAHHAILAGKEKRAVYALVATVSLALVFTGFQGMEYYQAPFTI DSIYGSTFF ATGFHG
Sbjct: 149 WAHHAILAGKEKRAVYALVATVSLALVFTGFQGMEYYQAPFTISDSIYGSTFFLATGFHG 208

Query: 122 FHVIIGTLFLIICGIRQYLGHLTKEHHVGFEAAAWYWHFVDVVRLFLFISIYWWGGI 179
           FHVIIGTLFLIICGIRQYLG +TKEHHVGFEAAAWYWHFVDVVRLF F+SIYWWGGI
Sbjct: 209 FHVIIGTLFLIICGIRQYLGQMTKEHHVGFEAAAWYWHFVDVVRLFPFVSIYWWGGI 265

[Close]
BLAST of CmaCh19G003830 vs. Swiss-Prot
Match: COX3_OENBE (Cytochrome c oxidase subunit 3 OS=Oenothera berteroana GN=COX3 PE=3 SV=2)

HSP 1 Score: 342.8 bits (878), Expect = 3.2e-93
Identity = 168/178 (94.38%), Postives = 172/178 (96.63%), Query Frame = 1 

Query: 1   MFIVSEVMFLFAFFRASSHSSLAPTVEIGGIWPPKGIGVLDPREIPFLNTPILLSSGAAV 60
           +FIVSEVMFLFAFF ASSHSSLAPTVEIGGIWPPKGIGVLDP EIPFLNTPILLSSGAAV
Sbjct: 88  LFIVSEVMFLFAFFWASSHSSLAPTVEIGGIWPPKGIGVLDPWEIPFLNTPILLSSGAAV 147

Query: 61  TWAHHAILAGKEKRAVYALVATVSLALVFTGFQGMEYYQAPFTILDSIYGSTFFSATGFH 120
           TWAHHAILAGKEKRAVYALVATVSLA+VFTGFQGMEYYQAP TI DSIYGSTF+ ATGFH
Sbjct: 148 TWAHHAILAGKEKRAVYALVATVSLAIVFTGFQGMEYYQAPPTISDSIYGSTFYLATGFH 207

Query: 121 GFHVIIGTLFLIICGIRQYLGHLTKEHHVGFEAAAWYWHFVDVVRLFLFISIYWWGGI 179
           GFHVIIGTLF IICGIRQYLGHLTKEHHVGFEAAAWYWHFVDVVRLFLF+SIYWWGGI
Sbjct: 208 GFHVIIGTLFSIICGIRQYLGHLTKEHHVGFEAAAWYWHFVDVVRLFLFVSIYWWGGI 265

[Close]
BLAST of CmaCh19G003830 vs. Swiss-Prot
Match: COX3_SOYBN (Cytochrome c oxidase subunit 3 OS=Glycine max GN=COX3 PE=2 SV=1)

HSP 1 Score: 341.3 bits (874), Expect = 9.4e-93
Identity = 169/177 (95.48%), Postives = 170/177 (96.05%), Query Frame = 1 

Query: 2   FIVSEVMFLFAFFRASSHSSLAPTVEIGGIWPPKGIGVLDPREIPFLNTPILLSSGAAVT 61
           FIVSEVMFLFAFF ASSHSSLAPTVEIGGIWPP GI VLDP EIPFLNTPILLSSGAAVT
Sbjct: 89  FIVSEVMFLFAFFWASSHSSLAPTVEIGGIWPPLGIWVLDPWEIPFLNTPILLSSGAAVT 148

Query: 62  WAHHAILAGKEKRAVYALVATVSLALVFTGFQGMEYYQAPFTILDSIYGSTFFSATGFHG 121
           WAHHAILAGKEKRAVYALVATVSLALVFTGFQGMEYYQAPFTI DSIYGSTFF ATGFHG
Sbjct: 149 WAHHAILAGKEKRAVYALVATVSLALVFTGFQGMEYYQAPFTISDSIYGSTFFLATGFHG 208

Query: 122 FHVIIGTLFLIICGIRQYLGHLTKEHHVGFEAAAWYWHFVDVVRLFLFISIYWWGGI 179
           FHVIIGTLFLIICGIRQYLGHLTKEHHVGFEAAAWYWHFVDVV LFLF+SIYWWGGI
Sbjct: 209 FHVIIGTLFLIICGIRQYLGHLTKEHHVGFEAAAWYWHFVDVVWLFLFVSIYWWGGI 265

[Close]
BLAST of CmaCh19G003830 vs. Swiss-Prot
Match: COX3_HELAN (Cytochrome c oxidase subunit 3 OS=Helianthus annuus GN=COX3 PE=3 SV=1)

HSP 1 Score: 339.0 bits (868), Expect = 4.6e-92
Identity = 166/178 (93.26%), Postives = 169/178 (94.94%), Query Frame = 1 

Query: 1   MFIVSEVMFLFAFFRASSHSSLAPTVEIGGIWPPKGIGVLDPREIPFLNTPILLSSGAAV 60
           +FIVSEVMFLFA FRASSHSSLAPTVEIGGIWPPKGI VLDPREIPFLNTPI LSSGAAV
Sbjct: 88  LFIVSEVMFLFALFRASSHSSLAPTVEIGGIWPPKGIAVLDPREIPFLNTPIPLSSGAAV 147

Query: 61  TWAHHAILAGKEKRAVYALVATVSLALVFTGFQGMEYYQAPFTILDSIYGSTFFSATGFH 120
           TWAHHAILAGKEKRAVYALVATVSLALVFT FQGMEYYQAP TI DSIYGSTFF ATGFH
Sbjct: 148 TWAHHAILAGKEKRAVYALVATVSLALVFTAFQGMEYYQAPSTISDSIYGSTFFLATGFH 207

Query: 121 GFHVIIGTLFLIICGIRQYLGHLTKEHHVGFEAAAWYWHFVDVVRLFLFISIYWWGGI 179
           GFHVIIGTLF I+CGIRQYLGHLTKEHHVGFEAAAWYWHFVDVVRLF F+SIYWWGGI
Sbjct: 208 GFHVIIGTLFSIVCGIRQYLGHLTKEHHVGFEAAAWYWHFVDVVRLFPFVSIYWWGGI 265

[Close]
BLAST of CmaCh19G003830 vs. Swiss-Prot
Match: COX3_ORYSI (Cytochrome c oxidase subunit 3 OS=Oryza sativa subsp. indica GN=COX3 PE=3 SV=2)

HSP 1 Score: 332.8 bits (852), Expect = 3.3e-90
Identity = 164/178 (92.13%), Postives = 168/178 (94.38%), Query Frame = 1 

Query: 1   MFIVSEVMFLFAFFRASSHSSLAPTVEIGGIWPPKGIGVLDPREIPFLNTPILLSSGAAV 60
           +FIVSEVMFLFAFF ASSHSSLAPTVEIGGIWPPKGIGVLDP EIP LNTPIL SSGAAV
Sbjct: 88  LFIVSEVMFLFAFFWASSHSSLAPTVEIGGIWPPKGIGVLDPWEIPLLNTPILPSSGAAV 147

Query: 61  TWAHHAILAGKEKRAVYALVATVSLALVFTGFQGMEYYQAPFTILDSIYGSTFFSATGFH 120
           TWAHHAILAGKEKRAVYALVATV LALV TGFQGMEYYQAP TI DSIYGSTFF ATGFH
Sbjct: 148 TWAHHAILAGKEKRAVYALVATVLLALVSTGFQGMEYYQAPSTISDSIYGSTFFLATGFH 207

Query: 121 GFHVIIGTLFLIICGIRQYLGHLTKEHHVGFEAAAWYWHFVDVVRLFLFISIYWWGGI 179
           GFHVIIGTLFLI+CGIRQYLGHLTK+HHVGFEAAAWYWHFVDVVRLF F+SIYWWGGI
Sbjct: 208 GFHVIIGTLFLIVCGIRQYLGHLTKKHHVGFEAAAWYWHFVDVVRLFPFVSIYWWGGI 265

[Close]
BLAST of CmaCh19G003830 vs. TrEMBL
Match: G3EU17_CUCME (Cytochrome c oxidase subunit 3 OS=Cucumis melo subsp. melo GN=cox3 PE=3 SV=1)

HSP 1 Score: 356.7 bits (914), Expect = 2.4e-95
Identity = 173/178 (97.19%), Postives = 176/178 (98.88%), Query Frame = 1 

Query: 1   MFIVSEVMFLFAFFRASSHSSLAPTVEIGGIWPPKGIGVLDPREIPFLNTPILLSSGAAV 60
           +FIVSEVMFLFAFFRASSHSSLAPTVEIGGIWPPKGIGVLDPREIPFLNTPILLSSGAAV
Sbjct: 88  LFIVSEVMFLFAFFRASSHSSLAPTVEIGGIWPPKGIGVLDPREIPFLNTPILLSSGAAV 147

Query: 61  TWAHHAILAGKEKRAVYALVATVSLALVFTGFQGMEYYQAPFTILDSIYGSTFFSATGFH 120
           TWAHHAILAGKEKRAVYALVATVSLALVFTGFQGMEYYQAPFTI DSIYGSTFF ATGFH
Sbjct: 148 TWAHHAILAGKEKRAVYALVATVSLALVFTGFQGMEYYQAPFTISDSIYGSTFFLATGFH 207

Query: 121 GFHVIIGTLFLIICGIRQYLGHLTKEHHVGFEAAAWYWHFVDVVRLFLFISIYWWGGI 179
           GFHVIIGTLFLI+CGIRQYLGHLTKEHHVGFEAAAWYWHFVDVVRLFLF+SIYWWGGI
Sbjct: 208 GFHVIIGTLFLIVCGIRQYLGHLTKEHHVGFEAAAWYWHFVDVVRLFLFVSIYWWGGI 265

[Close]
BLAST of CmaCh19G003830 vs. TrEMBL
Match: G3EJ02_CUCSA (Cytochrome c oxidase subunit 3 OS=Cucumis sativus GN=cox3 PE=3 SV=1)

HSP 1 Score: 356.7 bits (914), Expect = 2.4e-95
Identity = 173/178 (97.19%), Postives = 176/178 (98.88%), Query Frame = 1 

Query: 1   MFIVSEVMFLFAFFRASSHSSLAPTVEIGGIWPPKGIGVLDPREIPFLNTPILLSSGAAV 60
           +FIVSEVMFLFAFFRASSHSSLAPTVEIGGIWPPKGIGVLDPREIPFLNTPILLSSGAAV
Sbjct: 88  LFIVSEVMFLFAFFRASSHSSLAPTVEIGGIWPPKGIGVLDPREIPFLNTPILLSSGAAV 147

Query: 61  TWAHHAILAGKEKRAVYALVATVSLALVFTGFQGMEYYQAPFTILDSIYGSTFFSATGFH 120
           TWAHHAILAGKEKRAVYALVATVSLALVFTGFQGMEYYQAPFTI DSIYGSTFF ATGFH
Sbjct: 148 TWAHHAILAGKEKRAVYALVATVSLALVFTGFQGMEYYQAPFTISDSIYGSTFFLATGFH 207

Query: 121 GFHVIIGTLFLIICGIRQYLGHLTKEHHVGFEAAAWYWHFVDVVRLFLFISIYWWGGI 179
           GFHVIIGTLFLI+CGIRQYLGHLTKEHHVGFEAAAWYWHFVDVVRLFLF+SIYWWGGI
Sbjct: 208 GFHVIIGTLFLIVCGIRQYLGHLTKEHHVGFEAAAWYWHFVDVVRLFLFVSIYWWGGI 265

[Close]
BLAST of CmaCh19G003830 vs. TrEMBL
Match: A0A0X8GII5_9FABA (Cytochrome c oxidase subunit 3 OS=Lathyrus decaphyllus PE=3 SV=1)

HSP 1 Score: 353.6 bits (906), Expect = 2.0e-94
Identity = 173/177 (97.74%), Postives = 174/177 (98.31%), Query Frame = 1 

Query: 2   FIVSEVMFLFAFFRASSHSSLAPTVEIGGIWPPKGIGVLDPREIPFLNTPILLSSGAAVT 61
           FIVSEVMFLFAFFRASSHSSLAPTVEIGGIWPPKGIGVLDPREIPFLNTPILLSSGAAVT
Sbjct: 89  FIVSEVMFLFAFFRASSHSSLAPTVEIGGIWPPKGIGVLDPREIPFLNTPILLSSGAAVT 148

Query: 62  WAHHAILAGKEKRAVYALVATVSLALVFTGFQGMEYYQAPFTILDSIYGSTFFSATGFHG 121
           WAHHAILAGKEKRAVYALVATVSLALVFTGFQGMEYYQAPFTI DSIYGSTFF ATGFHG
Sbjct: 149 WAHHAILAGKEKRAVYALVATVSLALVFTGFQGMEYYQAPFTISDSIYGSTFFLATGFHG 208

Query: 122 FHVIIGTLFLIICGIRQYLGHLTKEHHVGFEAAAWYWHFVDVVRLFLFISIYWWGGI 179
           FHVIIGTLFLIICGIRQYLGHLTKEHHVGFEAAAWYWHFVDVVRLF F+SIYWWGGI
Sbjct: 209 FHVIIGTLFLIICGIRQYLGHLTKEHHVGFEAAAWYWHFVDVVRLFPFVSIYWWGGI 265

[Close]
BLAST of CmaCh19G003830 vs. TrEMBL
Match: A0A0X8GIU3_9FABA (Cytochrome c oxidase subunit 3 OS=Glycyrrhiza lepidota PE=3 SV=1)

HSP 1 Score: 353.6 bits (906), Expect = 2.0e-94
Identity = 173/177 (97.74%), Postives = 174/177 (98.31%), Query Frame = 1 

Query: 2   FIVSEVMFLFAFFRASSHSSLAPTVEIGGIWPPKGIGVLDPREIPFLNTPILLSSGAAVT 61
           FIVSEVMFLFAFFRASSHSSLAPTVEIGGIWPPKGIGVLDPREIPFLNTPILLSSGAAVT
Sbjct: 89  FIVSEVMFLFAFFRASSHSSLAPTVEIGGIWPPKGIGVLDPREIPFLNTPILLSSGAAVT 148

Query: 62  WAHHAILAGKEKRAVYALVATVSLALVFTGFQGMEYYQAPFTILDSIYGSTFFSATGFHG 121
           WAHHAILAGKEKRAVYALVATVSLALVFTGFQGMEYYQAPFTI DSIYGSTFF ATGFHG
Sbjct: 149 WAHHAILAGKEKRAVYALVATVSLALVFTGFQGMEYYQAPFTISDSIYGSTFFLATGFHG 208

Query: 122 FHVIIGTLFLIICGIRQYLGHLTKEHHVGFEAAAWYWHFVDVVRLFLFISIYWWGGI 179
           FHVIIGTLFLIICGIRQYLGHLTKEHHVGFEAAAWYWHFVDVVRLF F+SIYWWGGI
Sbjct: 209 FHVIIGTLFLIICGIRQYLGHLTKEHHVGFEAAAWYWHFVDVVRLFPFVSIYWWGGI 265

[Close]
BLAST of CmaCh19G003830 vs. TrEMBL
Match: A0A0X8GK83_9FABA (Cytochrome c oxidase subunit 3 OS=Oxytropis lambertii PE=3 SV=1)

HSP 1 Score: 353.6 bits (906), Expect = 2.0e-94
Identity = 173/177 (97.74%), Postives = 174/177 (98.31%), Query Frame = 1 

Query: 2   FIVSEVMFLFAFFRASSHSSLAPTVEIGGIWPPKGIGVLDPREIPFLNTPILLSSGAAVT 61
           FIVSEVMFLFAFFRASSHSSLAPTVEIGGIWPPKGIGVLDPREIPFLNTPILLSSGAAVT
Sbjct: 89  FIVSEVMFLFAFFRASSHSSLAPTVEIGGIWPPKGIGVLDPREIPFLNTPILLSSGAAVT 148

Query: 62  WAHHAILAGKEKRAVYALVATVSLALVFTGFQGMEYYQAPFTILDSIYGSTFFSATGFHG 121
           WAHHAILAGKEKRAVYALVATVSLALVFTGFQGMEYYQAPFTI DSIYGSTFF ATGFHG
Sbjct: 149 WAHHAILAGKEKRAVYALVATVSLALVFTGFQGMEYYQAPFTISDSIYGSTFFLATGFHG 208

Query: 122 FHVIIGTLFLIICGIRQYLGHLTKEHHVGFEAAAWYWHFVDVVRLFLFISIYWWGGI 179
           FHVIIGTLFLIICGIRQYLGHLTKEHHVGFEAAAWYWHFVDVVRLF F+SIYWWGGI
Sbjct: 209 FHVIIGTLFLIICGIRQYLGHLTKEHHVGFEAAAWYWHFVDVVRLFPFVSIYWWGGI 265

[Close]
BLAST of CmaCh19G003830 vs. TAIR10
Match: AT2G07687.1 (AT2G07687.1 Cytochrome c oxidase, subunit III)

HSP 1 Score: 336.3 bits (861), Expect = 1.7e-92
Identity = 166/178 (93.26%), Postives = 168/178 (94.38%), Query Frame = 1 

Query: 1   MFIVSEVMFLFAFFRASSHSSLAPTVEIGGIWPPKGIGVLDPREIPFLNTPILLSSGAAV 60
           +FIVSEVMF FAFF ASSHSSLAP VEIGGIWPPKGI VLDP EIPFLNTPIL SSGAAV
Sbjct: 88  LFIVSEVMFFFAFFWASSHSSLAPAVEIGGIWPPKGIEVLDPWEIPFLNTPILPSSGAAV 147

Query: 61  TWAHHAILAGKEKRAVYALVATVSLALVFTGFQGMEYYQAPFTILDSIYGSTFFSATGFH 120
           TWAHHAILAGKEKRAVYALVATV LALVFTGFQGMEYYQAPFTI DSIYGSTFF ATGFH
Sbjct: 148 TWAHHAILAGKEKRAVYALVATVLLALVFTGFQGMEYYQAPFTISDSIYGSTFFLATGFH 207

Query: 121 GFHVIIGTLFLIICGIRQYLGHLTKEHHVGFEAAAWYWHFVDVVRLFLFISIYWWGGI 179
           GFHVIIGTLFLIICGIRQYLGHLTKEHHVGFEAAAWYWHFVDVV LFLF+SIYWWGGI
Sbjct: 208 GFHVIIGTLFLIICGIRQYLGHLTKEHHVGFEAAAWYWHFVDVVWLFLFVSIYWWGGI 265

[Close]
BLAST of CmaCh19G003830 vs. TAIR10
Match: ATMG00730.1 (ATMG00730.1 cytochrome c oxidase subunit 3)

HSP 1 Score: 336.3 bits (861), Expect = 1.7e-92
Identity = 166/178 (93.26%), Postives = 168/178 (94.38%), Query Frame = 1 

Query: 1   MFIVSEVMFLFAFFRASSHSSLAPTVEIGGIWPPKGIGVLDPREIPFLNTPILLSSGAAV 60
           +FIVSEVMF FAFF ASSHSSLAP VEIGGIWPPKGI VLDP EIPFLNTPIL SSGAAV
Sbjct: 88  LFIVSEVMFFFAFFWASSHSSLAPAVEIGGIWPPKGIEVLDPWEIPFLNTPILPSSGAAV 147

Query: 61  TWAHHAILAGKEKRAVYALVATVSLALVFTGFQGMEYYQAPFTILDSIYGSTFFSATGFH 120
           TWAHHAILAGKEKRAVYALVATV LALVFTGFQGMEYYQAPFTI DSIYGSTFF ATGFH
Sbjct: 148 TWAHHAILAGKEKRAVYALVATVLLALVFTGFQGMEYYQAPFTISDSIYGSTFFLATGFH 207

Query: 121 GFHVIIGTLFLIICGIRQYLGHLTKEHHVGFEAAAWYWHFVDVVRLFLFISIYWWGGI 179
           GFHVIIGTLFLIICGIRQYLGHLTKEHHVGFEAAAWYWHFVDVV LFLF+SIYWWGGI
Sbjct: 208 GFHVIIGTLFLIICGIRQYLGHLTKEHHVGFEAAAWYWHFVDVVWLFLFVSIYWWGGI 265

[Close]
BLAST of CmaCh19G003830 vs. NCBI nr
Match: gi|345034414|gb|AEN56100.1| (cytochrome c oxidase subunit 3 [Cucumis melo subsp. melo])

HSP 1 Score: 356.7 bits (914), Expect = 3.4e-95
Identity = 173/178 (97.19%), Postives = 176/178 (98.88%), Query Frame = 1 

Query: 1   MFIVSEVMFLFAFFRASSHSSLAPTVEIGGIWPPKGIGVLDPREIPFLNTPILLSSGAAV 60
           +FIVSEVMFLFAFFRASSHSSLAPTVEIGGIWPPKGIGVLDPREIPFLNTPILLSSGAAV
Sbjct: 88  LFIVSEVMFLFAFFRASSHSSLAPTVEIGGIWPPKGIGVLDPREIPFLNTPILLSSGAAV 147

Query: 61  TWAHHAILAGKEKRAVYALVATVSLALVFTGFQGMEYYQAPFTILDSIYGSTFFSATGFH 120
           TWAHHAILAGKEKRAVYALVATVSLALVFTGFQGMEYYQAPFTI DSIYGSTFF ATGFH
Sbjct: 148 TWAHHAILAGKEKRAVYALVATVSLALVFTGFQGMEYYQAPFTISDSIYGSTFFLATGFH 207

Query: 121 GFHVIIGTLFLIICGIRQYLGHLTKEHHVGFEAAAWYWHFVDVVRLFLFISIYWWGGI 179
           GFHVIIGTLFLI+CGIRQYLGHLTKEHHVGFEAAAWYWHFVDVVRLFLF+SIYWWGGI
Sbjct: 208 GFHVIIGTLFLIVCGIRQYLGHLTKEHHVGFEAAAWYWHFVDVVRLFLFVSIYWWGGI 265

[Close]
BLAST of CmaCh19G003830 vs. NCBI nr
Match: gi|346683388|ref|YP_004849350.1| (cytochrome c oxidase subunit 3 [Cucumis sativus])

HSP 1 Score: 356.7 bits (914), Expect = 3.4e-95
Identity = 173/178 (97.19%), Postives = 176/178 (98.88%), Query Frame = 1 

Query: 1   MFIVSEVMFLFAFFRASSHSSLAPTVEIGGIWPPKGIGVLDPREIPFLNTPILLSSGAAV 60
           +FIVSEVMFLFAFFRASSHSSLAPTVEIGGIWPPKGIGVLDPREIPFLNTPILLSSGAAV
Sbjct: 88  LFIVSEVMFLFAFFRASSHSSLAPTVEIGGIWPPKGIGVLDPREIPFLNTPILLSSGAAV 147

Query: 61  TWAHHAILAGKEKRAVYALVATVSLALVFTGFQGMEYYQAPFTILDSIYGSTFFSATGFH 120
           TWAHHAILAGKEKRAVYALVATVSLALVFTGFQGMEYYQAPFTI DSIYGSTFF ATGFH
Sbjct: 148 TWAHHAILAGKEKRAVYALVATVSLALVFTGFQGMEYYQAPFTISDSIYGSTFFLATGFH 207

Query: 121 GFHVIIGTLFLIICGIRQYLGHLTKEHHVGFEAAAWYWHFVDVVRLFLFISIYWWGGI 179
           GFHVIIGTLFLI+CGIRQYLGHLTKEHHVGFEAAAWYWHFVDVVRLFLF+SIYWWGGI
Sbjct: 208 GFHVIIGTLFLIVCGIRQYLGHLTKEHHVGFEAAAWYWHFVDVVRLFLFVSIYWWGGI 265

[Close]
BLAST of CmaCh19G003830 vs. NCBI nr
Match: gi|404481703|ref|YP_006666135.1| (cytochrome c oxidase subunit III (mitochondrion) [Malus domestica])

HSP 1 Score: 353.6 bits (906), Expect = 2.9e-94
Identity = 173/177 (97.74%), Postives = 174/177 (98.31%), Query Frame = 1 

Query: 2   FIVSEVMFLFAFFRASSHSSLAPTVEIGGIWPPKGIGVLDPREIPFLNTPILLSSGAAVT 61
           FIVSEVMFLFAFFRASSHSSLAPTVEIGGIWPPKGIGVLDPREIPFLNTPILLSSGAAVT
Sbjct: 89  FIVSEVMFLFAFFRASSHSSLAPTVEIGGIWPPKGIGVLDPREIPFLNTPILLSSGAAVT 148

Query: 62  WAHHAILAGKEKRAVYALVATVSLALVFTGFQGMEYYQAPFTILDSIYGSTFFSATGFHG 121
           WAHHAILAGKEKRAVYALVATVSLALVFTGFQGMEYYQAPFTI DSIYGSTFF ATGFHG
Sbjct: 149 WAHHAILAGKEKRAVYALVATVSLALVFTGFQGMEYYQAPFTISDSIYGSTFFLATGFHG 208

Query: 122 FHVIIGTLFLIICGIRQYLGHLTKEHHVGFEAAAWYWHFVDVVRLFLFISIYWWGGI 179
           FHVIIGTLFLIICGIRQYLGHLTKEHHVGFEAAAWYWHFVDVVRLF F+SIYWWGGI
Sbjct: 209 FHVIIGTLFLIICGIRQYLGHLTKEHHVGFEAAAWYWHFVDVVRLFPFVSIYWWGGI 265

[Close]
BLAST of CmaCh19G003830 vs. NCBI nr
Match: gi|984914829|gb|AMC32841.1| (cytochrome c oxidase subunit 3 (mitochondrion) [Lathyrus decaphyllus])

HSP 1 Score: 353.6 bits (906), Expect = 2.9e-94
Identity = 173/177 (97.74%), Postives = 174/177 (98.31%), Query Frame = 1 

Query: 2   FIVSEVMFLFAFFRASSHSSLAPTVEIGGIWPPKGIGVLDPREIPFLNTPILLSSGAAVT 61
           FIVSEVMFLFAFFRASSHSSLAPTVEIGGIWPPKGIGVLDPREIPFLNTPILLSSGAAVT
Sbjct: 89  FIVSEVMFLFAFFRASSHSSLAPTVEIGGIWPPKGIGVLDPREIPFLNTPILLSSGAAVT 148

Query: 62  WAHHAILAGKEKRAVYALVATVSLALVFTGFQGMEYYQAPFTILDSIYGSTFFSATGFHG 121
           WAHHAILAGKEKRAVYALVATVSLALVFTGFQGMEYYQAPFTI DSIYGSTFF ATGFHG
Sbjct: 149 WAHHAILAGKEKRAVYALVATVSLALVFTGFQGMEYYQAPFTISDSIYGSTFFLATGFHG 208

Query: 122 FHVIIGTLFLIICGIRQYLGHLTKEHHVGFEAAAWYWHFVDVVRLFLFISIYWWGGI 179
           FHVIIGTLFLIICGIRQYLGHLTKEHHVGFEAAAWYWHFVDVVRLF F+SIYWWGGI
Sbjct: 209 FHVIIGTLFLIICGIRQYLGHLTKEHHVGFEAAAWYWHFVDVVRLFPFVSIYWWGGI 265

[Close]
BLAST of CmaCh19G003830 vs. NCBI nr
Match: gi|814606929|gb|AKE33980.1| (cytochrome c oxidase subunit 3, partial (mitochondrion) [Fragaria iinumae])

HSP 1 Score: 353.6 bits (906), Expect = 2.9e-94
Identity = 173/177 (97.74%), Postives = 174/177 (98.31%), Query Frame = 1 

Query: 2   FIVSEVMFLFAFFRASSHSSLAPTVEIGGIWPPKGIGVLDPREIPFLNTPILLSSGAAVT 61
           FIVSEVMFLFAFFRASSHSSLAPTVEIGGIWPPKGIGVLDPREIPFLNTPILLSSGAAVT
Sbjct: 89  FIVSEVMFLFAFFRASSHSSLAPTVEIGGIWPPKGIGVLDPREIPFLNTPILLSSGAAVT 148

Query: 62  WAHHAILAGKEKRAVYALVATVSLALVFTGFQGMEYYQAPFTILDSIYGSTFFSATGFHG 121
           WAHHAILAGKEKRAVYALVATVSLALVFTGFQGMEYYQAPFTI DSIYGSTFF ATGFHG
Sbjct: 149 WAHHAILAGKEKRAVYALVATVSLALVFTGFQGMEYYQAPFTISDSIYGSTFFLATGFHG 208

Query: 122 FHVIIGTLFLIICGIRQYLGHLTKEHHVGFEAAAWYWHFVDVVRLFLFISIYWWGGI 179
           FHVIIGTLFLIICGIRQYLGHLTKEHHVGFEAAAWYWHFVDVVRLF F+SIYWWGGI
Sbjct: 209 FHVIIGTLFLIICGIRQYLGHLTKEHHVGFEAAAWYWHFVDVVRLFPFVSIYWWGGI 265

The following BLAST results are available for this feature:
BLAST of CmaCh19G003830 vs. Swiss-Prot
Match NameE-valueIdentityDescription
COX3_VICFA2.6e-9596.61Cytochrome c oxidase subunit 3 OS=Vicia faba GN=COX3 PE=3 SV=1[more]
COX3_OENBE3.2e-9394.38Cytochrome c oxidase subunit 3 OS=Oenothera berteroana GN=COX3 PE=3 SV=2[more]
COX3_SOYBN9.4e-9395.48Cytochrome c oxidase subunit 3 OS=Glycine max GN=COX3 PE=2 SV=1[more]
COX3_HELAN4.6e-9293.26Cytochrome c oxidase subunit 3 OS=Helianthus annuus GN=COX3 PE=3 SV=1[more]
COX3_ORYSI3.3e-9092.13Cytochrome c oxidase subunit 3 OS=Oryza sativa subsp. indica GN=COX3 PE=3 SV=2[more]
BLAST of CmaCh19G003830 vs. TrEMBL
Match NameE-valueIdentityDescription
G3EU17_CUCME2.4e-9597.19Cytochrome c oxidase subunit 3 OS=Cucumis melo subsp. melo GN=cox3 PE=3 SV=1[more]
G3EJ02_CUCSA2.4e-9597.19Cytochrome c oxidase subunit 3 OS=Cucumis sativus GN=cox3 PE=3 SV=1[more]
A0A0X8GII5_9FABA2.0e-9497.74Cytochrome c oxidase subunit 3 OS=Lathyrus decaphyllus PE=3 SV=1[more]
A0A0X8GIU3_9FABA2.0e-9497.74Cytochrome c oxidase subunit 3 OS=Glycyrrhiza lepidota PE=3 SV=1[more]
A0A0X8GK83_9FABA2.0e-9497.74Cytochrome c oxidase subunit 3 OS=Oxytropis lambertii PE=3 SV=1[more]
BLAST of CmaCh19G003830 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G07687.11.7e-9293.26 Cytochrome c oxidase, subunit III[more]
ATMG00730.11.7e-9293.26ATMG00730.1 cytochrome c oxidase subunit 3[more]
BLAST of CmaCh19G003830 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|345034414|gb|AEN56100.1|3.4e-9597.19cytochrome c oxidase subunit 3 [Cucumis melo subsp. melo][more]
gi|346683388|ref|YP_004849350.1|3.4e-9597.19cytochrome c oxidase subunit 3 [Cucumis sativus][more]
gi|404481703|ref|YP_006666135.1|2.9e-9497.74cytochrome c oxidase subunit III (mitochondrion) [Malus domestica][more]
gi|984914829|gb|AMC32841.1|2.9e-9497.74cytochrome c oxidase subunit 3 (mitochondrion) [Lathyrus decaphyllus][more]
gi|814606929|gb|AKE33980.1|2.9e-9497.74cytochrome c oxidase subunit 3, partial (mitochondrion) [Fragaria iinumae][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR000298Cyt_c_oxidase-like_su3
IPR013833Cyt_c_oxidase_su3_a-hlx
IPR024791Cyt_c/ubiquinol_Oxase_su3
Vocabulary: Molecular Function
TermDefinition
GO:0015002heme-copper terminal oxidase activity
GO:0004129cytochrome-c oxidase activity
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: Biological Process
TermDefinition
GO:0022904respiratory electron transport chain
GO:0019646aerobic electron transport chain
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0019646 aerobic electron transport chain
biological_process GO:1902600 hydrogen ion transmembrane transport
biological_process GO:0006123 mitochondrial electron transport, cytochrome c to oxygen
biological_process GO:0022904 respiratory electron transport chain
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0005743 mitochondrial inner membrane
cellular_component GO:0045277 respiratory chain complex IV
cellular_component GO:0016020 membrane
molecular_function GO:0004129 cytochrome-c oxidase activity
molecular_function GO:0015002 heme-copper terminal oxidase activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh19G003830.1CmaCh19G003830.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000298Cytochrome c oxidase subunit III domainPFAMPF00510COX3coord: 1..176
score: 7.0
IPR000298Cytochrome c oxidase subunit III domainPROFILEPS50253COX3coord: 1..177
score: 36
IPR000298Cytochrome c oxidase subunit III domainunknownSSF81452Cytochrome c oxidase subunit III-likecoord: 1..176
score: 6.67
IPR013833Cytochrome c oxidase, subunit III, 4-helical bundleGENE3DG3DSA:1.20.120.80coord: 1..176
score: 1.9
IPR024791Cytochrome c oxidase subunit IIIPANTHERPTHR11403CYTOCHROME C OXIDASE SUBUNIT IIIcoord: 1..179
score: 6.5E
NoneNo IPR availablePANTHERPTHR11403:SF7CYTOCHROME C OXIDASE SUBUNIT 3coord: 1..179
score: 6.5E

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CmaCh19G003830Wax gourdcmawgoB0636
CmaCh19G003830Wax gourdcmawgoB0660
CmaCh19G003830Cucurbita maxima (Rimu)cmacmaB341
CmaCh19G003830Cucurbita maxima (Rimu)cmacmaB453
CmaCh19G003830Cucurbita maxima (Rimu)cmacmaB461
CmaCh19G003830Cucumber (Gy14) v1cgycmaB0868
CmaCh19G003830Cucumber (Gy14) v1cgycmaB0892
CmaCh19G003830Cucurbita moschata (Rifu)cmacmoB503
CmaCh19G003830Cucurbita moschata (Rifu)cmacmoB508
CmaCh19G003830Cucurbita moschata (Rifu)cmacmoB525
CmaCh19G003830Cucurbita moschata (Rifu)cmacmoB533
CmaCh19G003830Wild cucumber (PI 183967)cmacpiB518
CmaCh19G003830Wild cucumber (PI 183967)cmacpiB521
CmaCh19G003830Cucumber (Chinese Long) v2cmacuB511
CmaCh19G003830Cucumber (Chinese Long) v2cmacuB514
CmaCh19G003830Melon (DHL92) v3.5.1cmameB473
CmaCh19G003830Melon (DHL92) v3.5.1cmameB483
CmaCh19G003830Watermelon (Charleston Gray)cmawcgB440
CmaCh19G003830Watermelon (Charleston Gray)cmawcgB453
CmaCh19G003830Watermelon (97103) v1cmawmB472
CmaCh19G003830Cucurbita pepo (Zucchini)cmacpeB522
CmaCh19G003830Cucurbita pepo (Zucchini)cmacpeB544
CmaCh19G003830Bottle gourd (USVL1VR-Ls)cmalsiB490
CmaCh19G003830Bottle gourd (USVL1VR-Ls)cmalsiB497
CmaCh19G003830Cucumber (Gy14) v2cgybcmaB377
CmaCh19G003830Cucumber (Gy14) v2cgybcmaB381
CmaCh19G003830Melon (DHL92) v3.6.1cmamedB547
CmaCh19G003830Melon (DHL92) v3.6.1cmamedB558
CmaCh19G003830Silver-seed gourdcarcmaB0788
CmaCh19G003830Silver-seed gourdcarcmaB1083
CmaCh19G003830Cucumber (Chinese Long) v3cmacucB0616
CmaCh19G003830Cucumber (Chinese Long) v3cmacucB0620
CmaCh19G003830Watermelon (97103) v2cmawmbB525
CmaCh19G003830Watermelon (97103) v2cmawmbB549