CmaCh19G003710 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh19G003710
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	RAN GTPase 3
Location	Cma_Chr19 : 4204946 .. 4210057 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexonthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCACCGACGTCGGCTCTGGCGAAGTATAAGCTGGTCTTTCTCGGAGACCAGTCTGTTGGGAAAACCAGCATCATTACACGCTTCATGTACGACAAATTCGATAATACATATCAGGTAATTCCCTGCTGAATCCTTAATTGTTTAGATCCTTGTTTGTATCACACGTTGCGGCCGGATCGGTTCGGATACTGTTGATCAATGCCTGATCCTGTTGTTTCATCTTTAATTTTGATTCCTCTTGTTTCCATCTGCAGTTTTCTTTGATTATATGCGGTTTTATTTTCTGTTGTGTCTCGTTGTGTCATTGAGGAGGTCGACAATTCCGTGTTTATGGTTTCAGATCCTTTGGTTTTTTCTTCTTAGGCGATCAGCATTTTCCTTCCACACTCTGTATTTATTTCAATATATTAGTTCTTAGTCGAGAGTTCAGTAATCAAGCAGTGTCTTAAGTCTATGATTCTGACCTTGCTGCTTCCGGGTGAATGATGTTCAGAATTTAACGCTGTTGGCTGTCAACACCATTAGTCTTTAGTACTAGTTTATTGGGTACGCCTTGCAGAATTGGATCGAAATGAGGAGAAGGGAGGGTTTTCGTTGATGCCTTTCTTTCAGCTAATTTGAATCTAGACCATTATTCTAGAATCATGATCTGACTTCGTGCTAACTTTTGTGGACTGAAAAGCTTTTTGGTCTTTACTTCCCATATTTTAATTTGTTGGATTATTTGAAGAATAGTTGGCTGACTTCGTACAAAAAAAAAACCACTGTTACATGTCCTCGCATGCCTAGTATTTTGTCCCTACCTCATGGAGTTGGGTGAGCATTGCCAATAATCCAACTGCTACCAGATGTGTCTTCGGTTATTGTAACTGCATTGACAGCACAACATGATAAGTCCTGTATGGTTTTTGACTATTGGGACATTTTTGTCACTGCTTCTATGGGGAACAGGATATATAGAGGAAGCCGATTAGGAGTGATTGATGTTCAGTGGACAGGTGGATTGTGCTACTGATTAGTTTCCAAGTTAATAAGAACTAAGAAGATGCTAGATTCATCATGTTGTTGGGTTATCTCAGCAATAATTTTCTTAAATATTCTTTTGATGATGTTCTTTTCAATGCATCAATTTGAGGTTTTTACATTAAGCCTTTCGGGATTCTGTTATTTGTTTAGTCTTGACCAAGTGGAAATGTATCATAATTACATCTAGATCAAATGGGTGCATTATCTTCCATCTTTTGTATTTCCTTTTTGATAATGAATGGTAGATATATAGTTCCATCTCTCTCTCTTTCTTTTGTCTTCTTTTTTTATCTTTTGTTGGATACAAAGTTCTTTCAAAATTTCAGTTGCAATTTTATACCACACATTCACTTCTTGCAATATATAATTATGTACCATTGTTCAGGCTACAATTGGCATTGATTTTCTCTCAAAAACCATGTATCTGGAAGATCGTACTGTTCGACTGCAGTTGTGGTAAGATAAATTACAAATTTATGGTTGTTCATATATAGATGACTGCTTCTATTGGTTTTACTTATTCACATTACTCTTCTAATTCAATCACATTTTTGTGTTGTATATAAATCATGTGATTTATTTATCCTTGAGAATTGAAGAACTTATGTGATTTATTTGCTTCAGTCCATGGTATAAATGATACATTTCAACAACGGAAACAAGCAAACAATCCAGTATAGCTATTCCTCCTAGATTTAAACTATTCTCCTTTGAAACTTGAAAATAAATTTAAAGGTGTAGTCCTTGGGGGAGGAAATCCAAAAAGTCTGCATTTGGAATTCCTTTTTGGAGGAAAATTCTAAAAAATGATTGAACTAGTTTGCTGCTTTAGTCTGTAGAGGTGGGGGTGCTCATTTGCGGCAATTAATACTTTCATAGTATTCCCAATAAAGTTGTTAGAAATTTGAAGATATATATTAAAAAATTCTTTTGGGAGGGATCAAATGGAAAGTGCCGGACCACCTTATTGGATGAAATGTGGCCTCTAACATAAAATTAATTCTCTTCTTTAAATATGGTTGTGGAGGTTTCATAGGGAGGGAGCCCAATTTTTTTATGGGATGGAATTAATGAAAGTAATATTTGCTTCTCTGAAAAGCTCACTAGTTGTTTTTATTCCTCAGATAAAAGTTCTTGGTCTCACATCACGTCATTTATGTATATGGACAAGATTGAAAATATGAAATGTACAAAAATAGAGGAGCAAAGCCTCAACAACCCTGGCTAAGGAAGTTATGAAAAAAAAGTCTTCCAATTGGCACAAAGAGAAGAAAACACATGTTAAAAGTAAAAGGTTTGTACAAATATGAATAGGGCAATGCCCCAAAAATAATTTGATCCCATGAAACGAAAACAACCTTTAGAAGGATTCTATTATTTCTTTCCAACCATGAATTCTAAATAAAAGCTCCAATAAAACTCATCTCCATTGTCAGAAATGGGTAGTCATTTTATAGTTTCTTGGCTTCTTTTTGGGCCTCTCTCGCTAATCTTCAGAACTACCGTGCTATCTTTCTGAACATGGCCAATTGGAGACCTTATTTTTCCTTTTAACTCCTAGGCCTGTTCAATTTGTGCCTGCCACTCGAGGATGAAAGGAGATACAGAAAAAGCTGCACGAAGTTAATAAGAAAACTGCAGAATAAAAAAACTTCAGACAACTAGAAGGAACTAATTAGTTTCTATAGATAATATCATCTAGAAACTAAGTAACAAGCAATGTTTAATGTATCTTTGCCATCTGTATATTTTCCATCAAATAAAAAAAAAATGTTACAGGTGCGCTAATCAAATTTTTCCTTTGTTTTTGATAGACACATCTTATAAATTAATGTATCAATTTTGACTTCTTTTCACGTATATTTATGATACTTCTCATTCTATTTAATTGGATCGACTTTCATATTTGTCTTTTCCGGAAGAATGGGTTTTGCTGTACATTTATAAATTTTATGTTGCTTTGTTTCTCAGGGACACTGCTGGACAGGAAAGATTCAGAAGTCTAATACCAAGCTATATCAGGGACTCATCTGTCGCTGTCATTGTTTTTGATGTTGCAAGTATGGAATCTGAAATTTTCTATTGAATGAGAATAATTAAGTAAACCAATTGAAAGTGTGTATTCTTCGGTGTTGTGATAAAATATCTTGTATACTCTTGGGGTGGATCTGGGATCTAATATCCAAAGCCTTTTTGGTCCTTAATCTCATATAGTTACTCGATTACATGCTGTGGAGTTAATTCTGTGCCATGATGTGGTCAAAGGATTATTTTGAACTGTTTTTATCCTGTTGTTACTTAGGCCGGCAAACTTTCGTAAACACTTCAAAATGGATTGAGGAGGTGCGCACTGAGAGGGGCAGTGATGTCATTATAGTGCTTGTTGGGAACAAAACGGACCTTGTGGAGAAGAGGTAATAGCTAACCGTGGATTTTTATTTCGTTTGCATGTTCTATCTTTTTAGCTGTTTCAATTCTGAATAATATATGCAAACCTGAATTGGAGTTCTAAGAAAAATATTAATGATATTGAAGTGATATAGAGAGCTTGCATATCTTTTTGGCTTTTTAGATACCCTAAGCAATTGGTTAAAACATTAAAGGTTTGTTCTAACAGTCAGATGTTCAAATCCTCATCTCCATATTGTTCAAACCAAACACCCCTTATGAGCCTACTCAGCAACCAATCTGTAATTAGTTATGTCGGAAGTAAGGGGATGTCTAGAACTTAAAGGTTTGTTCTTGCCTCCATATTGTTCAAACGGTCAGATGTTCAAAAAATAGTTTGTTGTTACTACTCATTGTGCTATCCGATTTATGAATATAGCTTTCAAAATAAATTGAGCTCTAAGTTTCATCTAGTTTGATCTTTCTCTAAAAAAATCATTTAGTTAAATACCAAACTTGGACGATGATTCAAGTTAATATAGTATATCAGTAGTCTGGGCAATATTGTTTTAAGGCATATCATTATCAGATAATCTTACGTTTTTATTATATGTAATGTGTGGAAAAAGAGTAGAACATGATGTTGTGATCTACCACTGTTCTTGCTCCTATATTTTCTAAGGGAAAAATGTTTCAATTTAATATTGCGTTTTTTTGACATTACTTAGAAGTCTTGTTTGGCATGTTGTTTCACCATTTTCCCATATGCTGCATTGGTAGGCAAGTCTCCATAGAGGAAGGAGAAGCCAAAGCCCGTGAACTAAATGTCATGTTTATCGAAACAAGTGCTAAAGCTGGATTTAATATCAAGGTAAACCATTCATACTCTGATAGCCTGATATTTGTACTCTACCTCCAGATTGAACATATGCCAATCATCCGCTATATACTCTAGGGAACTTGACGAAGATGTTTTAGGATTACTCCATTCTTTGACAAAAATTTTGTTAAATCTTCGTACTCGTTTATGGTATTCTAACGGCCATCCCTATAATTTGTGCAGGCACTGTTCCGAAAAATCGCTGCAGCTTTGCCGGGAATGGAAACTCTCTCATCAGCAAAACAAGAAGACATGGTCGATGTTAACCTGAAGTCCTCAGGCAGTGGTGCTGCACAATCCCAGCAGCAGCCGGGTGGATGTGCCTGCTAATGATGCCCGATACGAATTGTTGACGGAATCACTCTTTCTTGCTTTTTGCTTTCAACGCCTCAACCTTCTAGAACTGTGAGCATATTCAGGTACAAGATTGGTTATATCTATATGAATGCCTTGCTTGAGCAGAGACTAAATTCGTAAAATGAAATTGGTGGCAAGGTAGACGATTGTTATTTTATGGAGTAATTTTATGTATTGGTGGAGTCATTATTTGGGTCCTTGGGATTTGTAAAAAAAAATAGATGTTTTTCTGTCGGACTTGATTACAAAATGGAAATTTATCTAGAAATTCTACAAATTTCACCTGTTCTTGCAATGGATTGTTGTGTTGGTTCATAATAAGATATGGCTGGCAGGAAAAAGGTGAGTGGTTTTCGTTCTTTGAGCTTTTGGTGTATAAAAAAGTTGAAAGAATCTCTTTTGTAGCGTTGCTTTATCTCTCTATGAATAGAGATAGAATTGGTTTCCGGATTTTTTTT

mRNA sequence

ATGGCACCGACGTCGGCTCTGGCGAAGTATAAGCTGGTCTTTCTCGGAGACCAGTCTGTTGGGAAAACCAGCATCATTACACGCTTCATGTACGACAAATTCGATAATACATATCAGGCTACAATTGGCATTGATTTTCTCTCAAAAACCATGTATCTGGAAGATCGTACTGTTCGACTGCAGTTGTGGGACACTGCTGGACAGGAAAGATTCAGAAGTCTAATACCAAGCTATATCAGGGACTCATCTGTCGCTGTCATTGTTTTTGATGTTGCAAGCCGGCAAACTTTCGTAAACACTTCAAAATGGATTGAGGAGGTGCGCACTGAGAGGGGCAGTGATGTCATTATAGTGCTTGTTGGGAACAAAACGGACCTTGTGGAGAAGAGGCAAGTCTCCATAGAGGAAGGAGAAGCCAAAGCCCGTGAACTAAATGTCATGTTTATCGAAACAAGTGCTAAAGCTGGATTTAATATCAAGGCACTGTTCCGAAAAATCGCTGCAGCTTTGCCGGGAATGGAAACTCTCTCATCAGCAAAACAAGAAGACATGGTCGATGTTAACCTGAAGTCCTCAGGCAGTGGTGCTGCACAATCCCAGCAGCAGCCGGGTGGATGTGCCTGCTAATGATGCCCGATACGAATTGTTGACGGAATCACTCTTTCTTGCTTTTTGCTTTCAACGCCTCAACCTTCTAGAACTGTGAGCATATTCAGGTACAAGATTGGTTATATCTATATGAATGCCTTGCTTGAGCAGAGACTAAATTCGTAAAATGAAATTGGTGGCAAGGTAGACGATTGTTATTTTATGGAGTAATTTTATGTATTGGTGGAGTCATTATTTGGGTCCTTGGGATTTGTAAAAAAAAATAGATGTTTTTCTGTCGGACTTGATTACAAAATGGAAATTTATCTAGAAATTCTACAAATTTCACCTGTTCTTGCAATGGATTGTTGTGTTGGTTCATAATAAGATATGGCTGGCAGGAAAAAGGTGAGTGGTTTTCGTTCTTTGAGCTTTTGGTGTATAAAAAAGTTGAAAGAATCTCTTTTGTAGCGTTGCTTTATCTCTCTATGAATAGAGATAGAATTGGTTTCCGGATTTTTTTT

Coding sequence (CDS)

ATGGCACCGACGTCGGCTCTGGCGAAGTATAAGCTGGTCTTTCTCGGAGACCAGTCTGTTGGGAAAACCAGCATCATTACACGCTTCATGTACGACAAATTCGATAATACATATCAGGCTACAATTGGCATTGATTTTCTCTCAAAAACCATGTATCTGGAAGATCGTACTGTTCGACTGCAGTTGTGGGACACTGCTGGACAGGAAAGATTCAGAAGTCTAATACCAAGCTATATCAGGGACTCATCTGTCGCTGTCATTGTTTTTGATGTTGCAAGCCGGCAAACTTTCGTAAACACTTCAAAATGGATTGAGGAGGTGCGCACTGAGAGGGGCAGTGATGTCATTATAGTGCTTGTTGGGAACAAAACGGACCTTGTGGAGAAGAGGCAAGTCTCCATAGAGGAAGGAGAAGCCAAAGCCCGTGAACTAAATGTCATGTTTATCGAAACAAGTGCTAAAGCTGGATTTAATATCAAGGCACTGTTCCGAAAAATCGCTGCAGCTTTGCCGGGAATGGAAACTCTCTCATCAGCAAAACAAGAAGACATGGTCGATGTTAACCTGAAGTCCTCAGGCAGTGGTGCTGCACAATCCCAGCAGCAGCCGGGTGGATGTGCCTGCTAA

Protein sequence

MAPTSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVIVFDVASRQTFVNTSKWIEEVRTERGSDVIIVLVGNKTDLVEKRQVSIEEGEAKARELNVMFIETSAKAGFNIKALFRKIAAALPGMETLSSAKQEDMVDVNLKSSGSGAAQSQQQPGGCAC

Homology

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BLAST of CmaCh19G003710 vs. Swiss-Prot
Match: RAH1B_ARATH (Ras-related protein RABH1b OS=Arabidopsis thaliana GN=RABH1B PE=1 SV=1)

HSP 1 Score: 368.6 bits (945), Expect = 4.4e-101
Identity = 190/208 (91.35%), Postives = 201/208 (96.63%), Query Frame = 1


Query: 1   MAPTSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL 60
           MAP SALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL
Sbjct: 1   MAPVSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL 60

Query: 61  QLWDTAGQERFRSLIPSYIRDSSVAVIVFDVASRQTFVNTSKWIEEVRTERGSDVIIVLV 120
           QLWDTAGQERFRSLIPSYIRDSSVAVIV+DVASRQ+F+NT+KWI+EVRTERGSDVI+VLV
Sbjct: 61  QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVASRQSFLNTTKWIDEVRTERGSDVIVVLV 120

Query: 121 GNKTDLVEKRQVSIEEGEAKARELNVMFIETSAKAGFNIKALFRKIAAALPGMETLSSAK 180
           GNKTDLV+KRQVSIEE EAKARELNVMFIETSAKAGFNIKALFRKIAAALPGMETLSS K
Sbjct: 121 GNKTDLVDKRQVSIEEAEAKARELNVMFIETSAKAGFNIKALFRKIAAALPGMETLSSTK 180

Query: 181 QEDMVDVNLKSSGSGAAQSQQQPGGCAC 209
           QEDMVDVNLKSS + A+ +QQQ GGC+C
Sbjct: 181 QEDMVDVNLKSSNANASLAQQQSGGCSC 208

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BLAST of CmaCh19G003710 vs. Swiss-Prot
Match: RAH1E_ARATH (Ras-related protein RABH1e OS=Arabidopsis thaliana GN=RABH1E PE=2 SV=1)

HSP 1 Score: 349.0 bits (894), Expect = 3.6e-95
Identity = 183/208 (87.98%), Postives = 195/208 (93.75%), Query Frame = 1


Query: 1   MAPTSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL 60
           MA  S LAKYKLVFLGDQSVGKTSIITRFMYDKFD TYQATIGIDFLSKTMYLEDRTVRL
Sbjct: 1   MASVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRL 60

Query: 61  QLWDTAGQERFRSLIPSYIRDSSVAVIVFDVASRQTFVNTSKWIEEVRTERGSDVIIVLV 120
           QLWDTAGQERFRSLIPSYIRDSSVAVIV+DVA+RQ+F+NTSKWIE+VRTERGSDVIIVLV
Sbjct: 61  QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSKWIEDVRTERGSDVIIVLV 120

Query: 121 GNKTDLVEKRQVSIEEGEAKARELNVMFIETSAKAGFNIKALFRKIAAALPGMETLSSAK 180
           GNKTDLV+KRQVSIEEG+ KAR+  V+FIETSAKAGFNIK LFRKIAAALPGMETLSS K
Sbjct: 121 GNKTDLVDKRQVSIEEGDNKARDYGVIFIETSAKAGFNIKPLFRKIAAALPGMETLSSTK 180

Query: 181 QEDMVDVNLKSSGSGAAQSQQQPGGCAC 209
           QEDMVDVNLK+S S +AQ +QQ GGCAC
Sbjct: 181 QEDMVDVNLKTS-SNSAQGEQQRGGCAC 207

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BLAST of CmaCh19G003710 vs. Swiss-Prot
Match: RAH1D_ARATH (Ras-related protein RABH1d OS=Arabidopsis thaliana GN=RABH1D PE=3 SV=1)

HSP 1 Score: 330.9 bits (847), Expect = 1.0e-89
Identity = 173/208 (83.17%), Postives = 186/208 (89.42%), Query Frame = 1


Query: 1   MAPTSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL 60
           MA  S LAKYKLVFLGDQSVGKTSIITRFMYDKFD TYQATIGIDFLSKTMYLEDRTVRL
Sbjct: 1   MASVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRL 60

Query: 61  QLWDTAGQERFRSLIPSYIRDSSVAVIVFDVASRQTFVNTSKWIEEVRTERGSDVIIVLV 120
           QLWDTAGQERFRSLIPSYIRDSSVAV+V+DVA+R +F+NTSKWIEEVR ER  DVIIVLV
Sbjct: 61  QLWDTAGQERFRSLIPSYIRDSSVAVVVYDVANRLSFLNTSKWIEEVRNERAGDVIIVLV 120

Query: 121 GNKTDLVEKRQVSIEEGEAKARELNVMFIETSAKAGFNIKALFRKIAAALPGMETLSSAK 180
           GNKTDLVEKRQVSIEEG++K RE  VMFIETSAKAGFNIK LFRKIAAALPGME+ S+ K
Sbjct: 121 GNKTDLVEKRQVSIEEGDSKGREYGVMFIETSAKAGFNIKPLFRKIAAALPGMESYSNTK 180

Query: 181 QEDMVDVNLKSSGSGAAQSQQQPGGCAC 209
            EDMVDVNLK + S ++Q  QQ G C+C
Sbjct: 181 NEDMVDVNLKPT-SNSSQGDQQGGACSC 207

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BLAST of CmaCh19G003710 vs. Swiss-Prot
Match: RAH1C_ARATH (Ras-related protein RABH1c OS=Arabidopsis thaliana GN=RABH1C PE=1 SV=1)

HSP 1 Score: 308.1 bits (788), Expect = 7.1e-83
Identity = 167/215 (77.67%), Postives = 187/215 (86.98%), Query Frame = 1


Query: 1   MAPTSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL 60
           MA  S LAK+KLVFLGDQSVGKTSIITRFMYDKFD TYQ TIGIDFLSKTMYLEDRTVRL
Sbjct: 1   MASVSPLAKFKLVFLGDQSVGKTSIITRFMYDKFDTTYQPTIGIDFLSKTMYLEDRTVRL 60

Query: 61  QLWDTAGQERFRSLIPSYIRDSSVAVIVFDVASRQTFVNTSKWIEEVRTERG-SDVIIVL 120
           QLWDTAGQERFRSLIPSYIRDSSVA++V+DV++RQTF+NTSKWIE+V  ERG S+VIIVL
Sbjct: 61  QLWDTAGQERFRSLIPSYIRDSSVAIVVYDVSNRQTFLNTSKWIEDVHRERGQSNVIIVL 120

Query: 121 VGNKTDLVEKRQVSIEEGEAKARELNVMFIETSAKAGFNIKALFRKIAAALPGMETLSSA 180
           VGNKTDLVEKRQVSI EGE K +E  VMFIETSAK  FNIKALFRKIAAALPG+++ S A
Sbjct: 121 VGNKTDLVEKRQVSISEGEDKGKEYGVMFIETSAKENFNIKALFRKIAAALPGVDSYSLA 180

Query: 181 -KQEDMVDVNLKSSGSGAAQSQQQ-----PGGCAC 209
            K +DMVDVNLK++ S ++Q +QQ      GGC+C
Sbjct: 181 TKSDDMVDVNLKTT-SNSSQGEQQGGAGGGGGCSC 214

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BLAST of CmaCh19G003710 vs. Swiss-Prot
Match: RAB6A_HUMAN (Ras-related protein Rab-6A OS=Homo sapiens GN=RAB6A PE=1 SV=3)

HSP 1 Score: 300.4 bits (768), Expect = 1.5e-80
Identity = 151/205 (73.66%), Postives = 178/205 (86.83%), Query Frame = 1


Query: 7   LAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 66
           L K+KLVFLG+QSVGKTS+ITRFMYD FDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTA
Sbjct: 11  LRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 70

Query: 67  GQERFRSLIPSYIRDSSVAVIVFDVASRQTFVNTSKWIEEVRTERGSDVIIVLVGNKTDL 126
           GQERFRSLIPSYIRDS+VAV+V+D+ +  +F  T+KWI++VRTERGSDVII+LVGNKTDL
Sbjct: 71  GQERFRSLIPSYIRDSTVAVVVYDITNVNSFQQTTKWIDDVRTERGSDVIIMLVGNKTDL 130

Query: 127 VEKRQVSIEEGEAKARELNVMFIETSAKAGFNIKALFRKIAAALPGMETLSSAKQEDMVD 186
            +KRQVSIEEGE KA+ELNVMFIETSAKAG+N+K LFR++AAALPGME+     +EDM+D
Sbjct: 131 ADKRQVSIEEGERKAKELNVMFIETSAKAGYNVKQLFRRVAAALPGMESTQDRSREDMID 190

Query: 187 VNLKSSGSGAAQSQQQP---GGCAC 209
           + L+       + Q+QP   GGC+C
Sbjct: 191 IKLE-------KPQEQPVSEGGCSC 208

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BLAST of CmaCh19G003710 vs. TrEMBL
Match: A0A0A0LI95_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G910690 PE=4 SV=1)

HSP 1 Score: 384.4 bits (986), Expect = 8.7e-104
Identity = 201/208 (96.63%), Postives = 204/208 (98.08%), Query Frame = 1


Query: 1   MAPTSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL 60
           MAPTSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL
Sbjct: 1   MAPTSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL 60

Query: 61  QLWDTAGQERFRSLIPSYIRDSSVAVIVFDVASRQTFVNTSKWIEEVRTERGSDVIIVLV 120
           QLWDTAGQERFRSLIPSYIRDSSVAVIV+DVASRQTF+NTSKWIEEVRTERGSDVIIVLV
Sbjct: 61  QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVASRQTFLNTSKWIEEVRTERGSDVIIVLV 120

Query: 121 GNKTDLVEKRQVSIEEGEAKARELNVMFIETSAKAGFNIKALFRKIAAALPGMETLSSAK 180
           GNKTDLVEKRQVSIEEGEAKARELNVMFIETSAKAGFNIKALFRKIAAALPGMETLSS K
Sbjct: 121 GNKTDLVEKRQVSIEEGEAKARELNVMFIETSAKAGFNIKALFRKIAAALPGMETLSSTK 180

Query: 181 QEDMVDVNLKSSGSGAAQSQQQPGGCAC 209
           QEDMVDVNLKS+GSGAAQSQ Q  GCAC
Sbjct: 181 QEDMVDVNLKSTGSGAAQSQPQSSGCAC 208

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BLAST of CmaCh19G003710 vs. TrEMBL
Match: A0A022RXG9_ERYGU (Uncharacterized protein OS=Erythranthe guttata GN=MIMGU_mgv1a013870mg PE=4 SV=1)

HSP 1 Score: 381.7 bits (979), Expect = 5.6e-103
Identity = 199/208 (95.67%), Postives = 204/208 (98.08%), Query Frame = 1


Query: 1   MAPTSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL 60
           MAP SALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL
Sbjct: 1   MAPVSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL 60

Query: 61  QLWDTAGQERFRSLIPSYIRDSSVAVIVFDVASRQTFVNTSKWIEEVRTERGSDVIIVLV 120
           QLWDTAGQERFRSLIPSYIRDSSVAVIVFDVASRQTF+NTSKWIEEVRTERGSDVIIVLV
Sbjct: 61  QLWDTAGQERFRSLIPSYIRDSSVAVIVFDVASRQTFLNTSKWIEEVRTERGSDVIIVLV 120

Query: 121 GNKTDLVEKRQVSIEEGEAKARELNVMFIETSAKAGFNIKALFRKIAAALPGMETLSSAK 180
           GNKTDLV+KRQVSIEEGEAKAR+LNVMFIETSAKAGFNIKALFRKIAAALPGMETLSSAK
Sbjct: 121 GNKTDLVDKRQVSIEEGEAKARDLNVMFIETSAKAGFNIKALFRKIAAALPGMETLSSAK 180

Query: 181 QEDMVDVNLKSSGSGAAQSQQQPGGCAC 209
           QEDMVDVNLKSS + A+QSQQQ GGCAC
Sbjct: 181 QEDMVDVNLKSSNTNASQSQQQSGGCAC 208

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BLAST of CmaCh19G003710 vs. TrEMBL
Match: K4AYP6_SOLLC (Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1)

HSP 1 Score: 379.4 bits (973), Expect = 2.8e-102
Identity = 199/208 (95.67%), Postives = 202/208 (97.12%), Query Frame = 1


Query: 1   MAPTSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL 60
           MAP SALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL
Sbjct: 1   MAPVSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL 60

Query: 61  QLWDTAGQERFRSLIPSYIRDSSVAVIVFDVASRQTFVNTSKWIEEVRTERGSDVIIVLV 120
           QLWDTAGQERFRSLIPSYIRDSSVAVIV+DVASRQ+F+NTSKWIEEVRTERGSDVIIVLV
Sbjct: 61  QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVASRQSFLNTSKWIEEVRTERGSDVIIVLV 120

Query: 121 GNKTDLVEKRQVSIEEGEAKARELNVMFIETSAKAGFNIKALFRKIAAALPGMETLSSAK 180
           GNKTDLVEKRQVSIEEGEAKARELNVMFIETSAKAGFNIK LFRKIAAALPGMETLSSAK
Sbjct: 121 GNKTDLVEKRQVSIEEGEAKARELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSAK 180

Query: 181 QEDMVDVNLKSSGSGAAQSQQQPGGCAC 209
           QEDMVDVNLKSS S AAQSQ Q GGCAC
Sbjct: 181 QEDMVDVNLKSSNSNAAQSQAQSGGCAC 208

[Close]

BLAST of CmaCh19G003710 vs. TrEMBL
Match: A0A068ULP0_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00028717001 PE=4 SV=1)

HSP 1 Score: 379.0 bits (972), Expect = 3.7e-102
Identity = 197/208 (94.71%), Postives = 204/208 (98.08%), Query Frame = 1


Query: 1   MAPTSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL 60
           MAP SALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL
Sbjct: 1   MAPVSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL 60

Query: 61  QLWDTAGQERFRSLIPSYIRDSSVAVIVFDVASRQTFVNTSKWIEEVRTERGSDVIIVLV 120
           QLWDTAGQERFRSLIPSYIRDSSVAVIVFDVASRQ+F+NTSKWIEEVRTERGSDVIIVLV
Sbjct: 61  QLWDTAGQERFRSLIPSYIRDSSVAVIVFDVASRQSFLNTSKWIEEVRTERGSDVIIVLV 120

Query: 121 GNKTDLVEKRQVSIEEGEAKARELNVMFIETSAKAGFNIKALFRKIAAALPGMETLSSAK 180
           GNKTDLV+KRQVSIEEGEAKAR+LNVMFIETSAKAGFNIKALFRKIAAALPGMETLSSAK
Sbjct: 121 GNKTDLVDKRQVSIEEGEAKARDLNVMFIETSAKAGFNIKALFRKIAAALPGMETLSSAK 180

Query: 181 QEDMVDVNLKSSGSGAAQSQQQPGGCAC 209
           QEDMVDVNLKSS + A+Q+QQQ GGCAC
Sbjct: 181 QEDMVDVNLKSSNTNASQAQQQSGGCAC 208

[Close]

BLAST of CmaCh19G003710 vs. TrEMBL
Match: A0A0V0HUJ9_SOLCH (Putative ras-related protein RABH1b-like OS=Solanum chacoense PE=4 SV=1)

HSP 1 Score: 378.3 bits (970), Expect = 6.2e-102
Identity = 198/208 (95.19%), Postives = 202/208 (97.12%), Query Frame = 1


Query: 1   MAPTSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL 60
           MAP SALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL
Sbjct: 1   MAPVSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL 60

Query: 61  QLWDTAGQERFRSLIPSYIRDSSVAVIVFDVASRQTFVNTSKWIEEVRTERGSDVIIVLV 120
           QLWDTAGQERFRSLIPSYIRDSSVAVIV+DVASRQ+F+NTSKWIEEVRTERGSDVIIVLV
Sbjct: 61  QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVASRQSFLNTSKWIEEVRTERGSDVIIVLV 120

Query: 121 GNKTDLVEKRQVSIEEGEAKARELNVMFIETSAKAGFNIKALFRKIAAALPGMETLSSAK 180
           GNKTDLVEKRQVSIEEGEAKARELNVMFIETSAKAGFNIK LFRKIAAALPGMETLSSAK
Sbjct: 121 GNKTDLVEKRQVSIEEGEAKARELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSAK 180

Query: 181 QEDMVDVNLKSSGSGAAQSQQQPGGCAC 209
           QEDMVDVNLKSS S A+QSQ Q GGCAC
Sbjct: 181 QEDMVDVNLKSSNSSASQSQAQSGGCAC 208

[Close]

BLAST of CmaCh19G003710 vs. TAIR10
Match: AT2G44610.1 (AT2G44610.1 Ras-related small GTP-binding family protein)

HSP 1 Score: 368.6 bits (945), Expect = 2.5e-102
Identity = 190/208 (91.35%), Postives = 201/208 (96.63%), Query Frame = 1


Query: 1   MAPTSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL 60
           MAP SALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL
Sbjct: 1   MAPVSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL 60

Query: 61  QLWDTAGQERFRSLIPSYIRDSSVAVIVFDVASRQTFVNTSKWIEEVRTERGSDVIIVLV 120
           QLWDTAGQERFRSLIPSYIRDSSVAVIV+DVASRQ+F+NT+KWI+EVRTERGSDVI+VLV
Sbjct: 61  QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVASRQSFLNTTKWIDEVRTERGSDVIVVLV 120

Query: 121 GNKTDLVEKRQVSIEEGEAKARELNVMFIETSAKAGFNIKALFRKIAAALPGMETLSSAK 180
           GNKTDLV+KRQVSIEE EAKARELNVMFIETSAKAGFNIKALFRKIAAALPGMETLSS K
Sbjct: 121 GNKTDLVDKRQVSIEEAEAKARELNVMFIETSAKAGFNIKALFRKIAAALPGMETLSSTK 180

Query: 181 QEDMVDVNLKSSGSGAAQSQQQPGGCAC 209
           QEDMVDVNLKSS + A+ +QQQ GGC+C
Sbjct: 181 QEDMVDVNLKSSNANASLAQQQSGGCSC 208

[Close]

BLAST of CmaCh19G003710 vs. TAIR10
Match: AT5G10260.1 (AT5G10260.1 RAB GTPase homolog H1E)

HSP 1 Score: 349.0 bits (894), Expect = 2.0e-96
Identity = 183/208 (87.98%), Postives = 195/208 (93.75%), Query Frame = 1


Query: 1   MAPTSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL 60
           MA  S LAKYKLVFLGDQSVGKTSIITRFMYDKFD TYQATIGIDFLSKTMYLEDRTVRL
Sbjct: 1   MASVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRL 60

Query: 61  QLWDTAGQERFRSLIPSYIRDSSVAVIVFDVASRQTFVNTSKWIEEVRTERGSDVIIVLV 120
           QLWDTAGQERFRSLIPSYIRDSSVAVIV+DVA+RQ+F+NTSKWIE+VRTERGSDVIIVLV
Sbjct: 61  QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSKWIEDVRTERGSDVIIVLV 120

Query: 121 GNKTDLVEKRQVSIEEGEAKARELNVMFIETSAKAGFNIKALFRKIAAALPGMETLSSAK 180
           GNKTDLV+KRQVSIEEG+ KAR+  V+FIETSAKAGFNIK LFRKIAAALPGMETLSS K
Sbjct: 121 GNKTDLVDKRQVSIEEGDNKARDYGVIFIETSAKAGFNIKPLFRKIAAALPGMETLSSTK 180

Query: 181 QEDMVDVNLKSSGSGAAQSQQQPGGCAC 209
           QEDMVDVNLK+S S +AQ +QQ GGCAC
Sbjct: 181 QEDMVDVNLKTS-SNSAQGEQQRGGCAC 207

[Close]

BLAST of CmaCh19G003710 vs. TAIR10
Match: AT2G22290.1 (AT2G22290.1 RAB GTPase homolog H1D)

HSP 1 Score: 330.9 bits (847), Expect = 5.8e-91
Identity = 173/208 (83.17%), Postives = 186/208 (89.42%), Query Frame = 1


Query: 1   MAPTSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL 60
           MA  S LAKYKLVFLGDQSVGKTSIITRFMYDKFD TYQATIGIDFLSKTMYLEDRTVRL
Sbjct: 1   MASVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRL 60

Query: 61  QLWDTAGQERFRSLIPSYIRDSSVAVIVFDVASRQTFVNTSKWIEEVRTERGSDVIIVLV 120
           QLWDTAGQERFRSLIPSYIRDSSVAV+V+DVA+R +F+NTSKWIEEVR ER  DVIIVLV
Sbjct: 61  QLWDTAGQERFRSLIPSYIRDSSVAVVVYDVANRLSFLNTSKWIEEVRNERAGDVIIVLV 120

Query: 121 GNKTDLVEKRQVSIEEGEAKARELNVMFIETSAKAGFNIKALFRKIAAALPGMETLSSAK 180
           GNKTDLVEKRQVSIEEG++K RE  VMFIETSAKAGFNIK LFRKIAAALPGME+ S+ K
Sbjct: 121 GNKTDLVEKRQVSIEEGDSKGREYGVMFIETSAKAGFNIKPLFRKIAAALPGMESYSNTK 180

Query: 181 QEDMVDVNLKSSGSGAAQSQQQPGGCAC 209
            EDMVDVNLK + S ++Q  QQ G C+C
Sbjct: 181 NEDMVDVNLKPT-SNSSQGDQQGGACSC 207

[Close]

BLAST of CmaCh19G003710 vs. TAIR10
Match: AT4G39890.1 (AT4G39890.1 RAB GTPase homolog H1C)

HSP 1 Score: 308.1 bits (788), Expect = 4.0e-84
Identity = 167/215 (77.67%), Postives = 187/215 (86.98%), Query Frame = 1


Query: 1   MAPTSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL 60
           MA  S LAK+KLVFLGDQSVGKTSIITRFMYDKFD TYQ TIGIDFLSKTMYLEDRTVRL
Sbjct: 1   MASVSPLAKFKLVFLGDQSVGKTSIITRFMYDKFDTTYQPTIGIDFLSKTMYLEDRTVRL 60

Query: 61  QLWDTAGQERFRSLIPSYIRDSSVAVIVFDVASRQTFVNTSKWIEEVRTERG-SDVIIVL 120
           QLWDTAGQERFRSLIPSYIRDSSVA++V+DV++RQTF+NTSKWIE+V  ERG S+VIIVL
Sbjct: 61  QLWDTAGQERFRSLIPSYIRDSSVAIVVYDVSNRQTFLNTSKWIEDVHRERGQSNVIIVL 120

Query: 121 VGNKTDLVEKRQVSIEEGEAKARELNVMFIETSAKAGFNIKALFRKIAAALPGMETLSSA 180
           VGNKTDLVEKRQVSI EGE K +E  VMFIETSAK  FNIKALFRKIAAALPG+++ S A
Sbjct: 121 VGNKTDLVEKRQVSISEGEDKGKEYGVMFIETSAKENFNIKALFRKIAAALPGVDSYSLA 180

Query: 181 -KQEDMVDVNLKSSGSGAAQSQQQ-----PGGCAC 209
            K +DMVDVNLK++ S ++Q +QQ      GGC+C
Sbjct: 181 TKSDDMVDVNLKTT-SNSSQGEQQGGAGGGGGCSC 214

[Close]

BLAST of CmaCh19G003710 vs. TAIR10
Match: AT5G64990.2 (AT5G64990.2 RAB GTPase homolog H1A)

HSP 1 Score: 278.5 bits (711), Expect = 3.4e-75
Identity = 150/206 (72.82%), Postives = 165/206 (80.10%), Query Frame = 1


Query: 10  YKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLW------ 69
           YKLVFLGDQ VGKTSIIT FMY KFD +YQATIGIDFLSKT   EDRT RLQLW      
Sbjct: 8   YKLVFLGDQGVGKTSIITCFMYGKFDTSYQATIGIDFLSKTTRYEDRTFRLQLWYKKLSL 67

Query: 70  -DTAGQERFRSLIPSYIRDSSVAVIVFDVASRQTFVNTSKWIEEVRTERGSDVIIVLVGN 129
            DTAGQERF+SL+PSYIRDSSVAVIV+DVAS+Q+F+NTSKWIEEVR ERGS VIIVLVGN
Sbjct: 68  GDTAGQERFKSLVPSYIRDSSVAVIVYDVASKQSFINTSKWIEEVRAERGSYVIIVLVGN 127

Query: 130 KTDLVEKRQVSIEEGEAKARELNVMFIETSAKAGFNIKALFRKIAAALPGMETLSSAKQE 189
           KTDLV KRQVSIEEGE KARE   +F+ETSAKAGFNIK LF KI +AL G E +S  KQE
Sbjct: 128 KTDLVNKRQVSIEEGENKAREFGALFMETSAKAGFNIKPLFCKITSALQGNEAVSWTKQE 187

Query: 190 DMVDVNLKSSGSGAAQSQQQPGGCAC 209
           D+VDVNLK     +  + QQ   C+C
Sbjct: 188 DLVDVNLKPLMFSSQANHQQESNCSC 213

[Close]

BLAST of CmaCh19G003710 vs. NCBI nr
Match: gi|449461547|ref|XP_004148503.1| (PREDICTED: ras-related protein RABH1b [Cucumis sativus])

HSP 1 Score: 384.4 bits (986), Expect = 1.2e-103
Identity = 201/208 (96.63%), Postives = 204/208 (98.08%), Query Frame = 1


Query: 1   MAPTSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL 60
           MAPTSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL
Sbjct: 1   MAPTSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL 60

Query: 61  QLWDTAGQERFRSLIPSYIRDSSVAVIVFDVASRQTFVNTSKWIEEVRTERGSDVIIVLV 120
           QLWDTAGQERFRSLIPSYIRDSSVAVIV+DVASRQTF+NTSKWIEEVRTERGSDVIIVLV
Sbjct: 61  QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVASRQTFLNTSKWIEEVRTERGSDVIIVLV 120

Query: 121 GNKTDLVEKRQVSIEEGEAKARELNVMFIETSAKAGFNIKALFRKIAAALPGMETLSSAK 180
           GNKTDLVEKRQVSIEEGEAKARELNVMFIETSAKAGFNIKALFRKIAAALPGMETLSS K
Sbjct: 121 GNKTDLVEKRQVSIEEGEAKARELNVMFIETSAKAGFNIKALFRKIAAALPGMETLSSTK 180

Query: 181 QEDMVDVNLKSSGSGAAQSQQQPGGCAC 209
           QEDMVDVNLKS+GSGAAQSQ Q  GCAC
Sbjct: 181 QEDMVDVNLKSTGSGAAQSQPQSSGCAC 208

[Close]

BLAST of CmaCh19G003710 vs. NCBI nr
Match: gi|848853815|ref|XP_012845427.1| (PREDICTED: ras-related protein RABH1b-like [Erythranthe guttata])

HSP 1 Score: 381.7 bits (979), Expect = 8.1e-103
Identity = 199/208 (95.67%), Postives = 204/208 (98.08%), Query Frame = 1


Query: 1   MAPTSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL 60
           MAP SALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL
Sbjct: 1   MAPVSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL 60

Query: 61  QLWDTAGQERFRSLIPSYIRDSSVAVIVFDVASRQTFVNTSKWIEEVRTERGSDVIIVLV 120
           QLWDTAGQERFRSLIPSYIRDSSVAVIVFDVASRQTF+NTSKWIEEVRTERGSDVIIVLV
Sbjct: 61  QLWDTAGQERFRSLIPSYIRDSSVAVIVFDVASRQTFLNTSKWIEEVRTERGSDVIIVLV 120

Query: 121 GNKTDLVEKRQVSIEEGEAKARELNVMFIETSAKAGFNIKALFRKIAAALPGMETLSSAK 180
           GNKTDLV+KRQVSIEEGEAKAR+LNVMFIETSAKAGFNIKALFRKIAAALPGMETLSSAK
Sbjct: 121 GNKTDLVDKRQVSIEEGEAKARDLNVMFIETSAKAGFNIKALFRKIAAALPGMETLSSAK 180

Query: 181 QEDMVDVNLKSSGSGAAQSQQQPGGCAC 209
           QEDMVDVNLKSS + A+QSQQQ GGCAC
Sbjct: 181 QEDMVDVNLKSSNTNASQSQQQSGGCAC 208

[Close]

BLAST of CmaCh19G003710 vs. NCBI nr
Match: gi|460367695|ref|XP_004229706.1| (PREDICTED: ras-related protein RABH1b [Solanum lycopersicum])

HSP 1 Score: 379.4 bits (973), Expect = 4.0e-102
Identity = 199/208 (95.67%), Postives = 202/208 (97.12%), Query Frame = 1


Query: 1   MAPTSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL 60
           MAP SALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL
Sbjct: 1   MAPVSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL 60

Query: 61  QLWDTAGQERFRSLIPSYIRDSSVAVIVFDVASRQTFVNTSKWIEEVRTERGSDVIIVLV 120
           QLWDTAGQERFRSLIPSYIRDSSVAVIV+DVASRQ+F+NTSKWIEEVRTERGSDVIIVLV
Sbjct: 61  QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVASRQSFLNTSKWIEEVRTERGSDVIIVLV 120

Query: 121 GNKTDLVEKRQVSIEEGEAKARELNVMFIETSAKAGFNIKALFRKIAAALPGMETLSSAK 180
           GNKTDLVEKRQVSIEEGEAKARELNVMFIETSAKAGFNIK LFRKIAAALPGMETLSSAK
Sbjct: 121 GNKTDLVEKRQVSIEEGEAKARELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSAK 180

Query: 181 QEDMVDVNLKSSGSGAAQSQQQPGGCAC 209
           QEDMVDVNLKSS S AAQSQ Q GGCAC
Sbjct: 181 QEDMVDVNLKSSNSNAAQSQAQSGGCAC 208

[Close]

BLAST of CmaCh19G003710 vs. NCBI nr
Match: gi|661886967|emb|CDP09376.1| (unnamed protein product [Coffea canephora])

HSP 1 Score: 379.0 bits (972), Expect = 5.2e-102
Identity = 197/208 (94.71%), Postives = 204/208 (98.08%), Query Frame = 1


Query: 1   MAPTSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL 60
           MAP SALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL
Sbjct: 1   MAPVSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL 60

Query: 61  QLWDTAGQERFRSLIPSYIRDSSVAVIVFDVASRQTFVNTSKWIEEVRTERGSDVIIVLV 120
           QLWDTAGQERFRSLIPSYIRDSSVAVIVFDVASRQ+F+NTSKWIEEVRTERGSDVIIVLV
Sbjct: 61  QLWDTAGQERFRSLIPSYIRDSSVAVIVFDVASRQSFLNTSKWIEEVRTERGSDVIIVLV 120

Query: 121 GNKTDLVEKRQVSIEEGEAKARELNVMFIETSAKAGFNIKALFRKIAAALPGMETLSSAK 180
           GNKTDLV+KRQVSIEEGEAKAR+LNVMFIETSAKAGFNIKALFRKIAAALPGMETLSSAK
Sbjct: 121 GNKTDLVDKRQVSIEEGEAKARDLNVMFIETSAKAGFNIKALFRKIAAALPGMETLSSAK 180

Query: 181 QEDMVDVNLKSSGSGAAQSQQQPGGCAC 209
           QEDMVDVNLKSS + A+Q+QQQ GGCAC
Sbjct: 181 QEDMVDVNLKSSNTNASQAQQQSGGCAC 208

[Close]

BLAST of CmaCh19G003710 vs. NCBI nr
Match: gi|747043719|ref|XP_011085344.1| (PREDICTED: ras-related protein RABH1b-like [Sesamum indicum])

HSP 1 Score: 378.6 bits (971), Expect = 6.8e-102
Identity = 197/208 (94.71%), Postives = 203/208 (97.60%), Query Frame = 1


Query: 1   MAPTSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL 60
           MAP SALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL
Sbjct: 1   MAPVSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL 60

Query: 61  QLWDTAGQERFRSLIPSYIRDSSVAVIVFDVASRQTFVNTSKWIEEVRTERGSDVIIVLV 120
           QLWDTAGQERFRSLIPSYIRDSSVAVIVFDVASRQ+F+NT+KWIEEVRTERGSDVIIVLV
Sbjct: 61  QLWDTAGQERFRSLIPSYIRDSSVAVIVFDVASRQSFLNTAKWIEEVRTERGSDVIIVLV 120

Query: 121 GNKTDLVEKRQVSIEEGEAKARELNVMFIETSAKAGFNIKALFRKIAAALPGMETLSSAK 180
           GNKTDLV+KRQVSIEEGEAKAR+LNVMFIETSAKAGFNIKALFRKIAAALPGMETLSS K
Sbjct: 121 GNKTDLVDKRQVSIEEGEAKARDLNVMFIETSAKAGFNIKALFRKIAAALPGMETLSSTK 180

Query: 181 QEDMVDVNLKSSGSGAAQSQQQPGGCAC 209
           QEDMVDVNLKSS + AAQSQQQ GGCAC
Sbjct: 181 QEDMVDVNLKSSNTNAAQSQQQSGGCAC 208

The following BLAST results are available for this feature:

BLAST of CmaCh19G003710 vs. Swiss-Prot


Match Name	E-value	Identity	Description
RAH1B_ARATH	4.4e-101	91.35	Ras-related protein RABH1b OS=Arabidopsis thaliana GN=RABH1B PE=1 SV=1	[more]
RAH1E_ARATH	3.6e-95	87.98	Ras-related protein RABH1e OS=Arabidopsis thaliana GN=RABH1E PE=2 SV=1	[more]
RAH1D_ARATH	1.0e-89	83.17	Ras-related protein RABH1d OS=Arabidopsis thaliana GN=RABH1D PE=3 SV=1	[more]
RAH1C_ARATH	7.1e-83	77.67	Ras-related protein RABH1c OS=Arabidopsis thaliana GN=RABH1C PE=1 SV=1	[more]
RAB6A_HUMAN	1.5e-80	73.66	Ras-related protein Rab-6A OS=Homo sapiens GN=RAB6A PE=1 SV=3	[more]

BLAST of CmaCh19G003710 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LI95_CUCSA	8.7e-104	96.63	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G910690 PE=4 SV=1	[more]
A0A022RXG9_ERYGU	5.6e-103	95.67	Uncharacterized protein OS=Erythranthe guttata GN=MIMGU_mgv1a013870mg PE=4 SV=1	[more]
K4AYP6_SOLLC	2.8e-102	95.67	Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1	[more]
A0A068ULP0_COFCA	3.7e-102	94.71	Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00028717001 PE=4 SV=1	[more]
A0A0V0HUJ9_SOLCH	6.2e-102	95.19	Putative ras-related protein RABH1b-like OS=Solanum chacoense PE=4 SV=1	[more]

BLAST of CmaCh19G003710 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G44610.1	2.5e-102	91.35	Ras-related small GTP-binding family protein	[more]
AT5G10260.1	2.0e-96	87.98	RAB GTPase homolog H1E	[more]
AT2G22290.1	5.8e-91	83.17	RAB GTPase homolog H1D	[more]
AT4G39890.1	4.0e-84	77.67	RAB GTPase homolog H1C	[more]
AT5G64990.2	3.4e-75	72.82	RAB GTPase homolog H1A	[more]

BLAST of CmaCh19G003710 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449461547\|ref\|XP_004148503.1\|	1.2e-103	96.63	PREDICTED: ras-related protein RABH1b [Cucumis sativus]	[more]
gi\|848853815\|ref\|XP_012845427.1\|	8.1e-103	95.67	PREDICTED: ras-related protein RABH1b-like [Erythranthe guttata]	[more]
gi\|460367695\|ref\|XP_004229706.1\|	4.0e-102	95.67	PREDICTED: ras-related protein RABH1b [Solanum lycopersicum]	[more]
gi\|661886967\|emb\|CDP09376.1\|	5.2e-102	94.71	unnamed protein product [Coffea canephora]	[more]
gi\|747043719\|ref\|XP_011085344.1\|	6.8e-102	94.71	PREDICTED: ras-related protein RABH1b-like [Sesamum indicum]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR001806	Small_GTPase
IPR005225	Small_GTP-bd_dom
IPR027417	P-loop_NTPase

Vocabulary: **Molecular Function**
Term	Definition
GO:0005525	GTP binding

Vocabulary: **Biological Process**
Term	Definition
GO:0007264	small GTPase mediated signal transduction

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006886	intracellular protein transport
biological_process	GO:0008152	metabolic process
biological_process	GO:0006913	nucleocytoplasmic transport
biological_process	GO:0007264	small GTPase mediated signal transduction
biological_process	GO:0008150	biological_process
biological_process	GO:0006890	retrograde vesicle-mediated transport, Golgi to ER
biological_process	GO:0042147	retrograde transport, endosome to Golgi
biological_process	GO:0032940	secretion by cell
biological_process	GO:0006891	intra-Golgi vesicle-mediated transport
cellular_component	GO:0005794	Golgi apparatus
cellular_component	GO:0005774	vacuolar membrane
cellular_component	GO:0005802	trans-Golgi network
cellular_component	GO:0009506	plasmodesma
cellular_component	GO:0005886	plasma membrane
cellular_component	GO:0000139	Golgi membrane
cellular_component	GO:0005768	endosome
cellular_component	GO:0005829	cytosol
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003924	GTPase activity
molecular_function	GO:0005525	GTP binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh19G003710.1	CmaCh19G003710.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001806	Small GTPase superfamily	PFAM	PF00071	Ras	coord: 11..169 score: 1.4
IPR005225	Small GTP-binding protein domain	TIGRFAMs	TIGR00231	TIGR00231	coord: 9..166 score: 3.0
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	G3DSA:3.40.50.300		coord: 7..207 score: 4.4
IPR027417	P-loop containing nucleoside triphosphate hydrolase	unknown	SSF52540	P-loop containing nucleoside triphosphate hydrolases	coord: 9..179 score: 1.14
None	No IPR available	PRINTS	PR00449	RASTRNSFRMNG	coord: 113..126 score: 5.0E-38coord: 10..31 score: 5.0E-38coord: 33..49 score: 5.0E-38coord: 51..73 score: 5.0E-38coord: 148..170 score: 5.0
None	No IPR available	PANTHER	PTHR24073	FAMILY NOT NAMED	coord: 2..208 score: 7.4E
None	No IPR available	PANTHER	PTHR24073:SF474	SUBFAMILY NOT NAMED	coord: 2..208 score: 7.4E
None	No IPR available	SMART	SM00173	ras_sub_4	coord: 7..173 score: 1.0
None	No IPR available	SMART	SM00174	rho_sub_3	coord: 12..172 score: 3.4
None	No IPR available	SMART	SM00175	rab_sub_5	coord: 10..173 score: 7.4
None	No IPR available	SMART	SM00176	ran_sub_2	coord: 15..208 score: 2.1
None	No IPR available	PROFILE	PS51419	RAB	coord: 2..208 score: 31

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh19G003710	Cucsa.313540	Cucumber (Gy14) v1	cgycmaB0868
CmaCh19G003710	Cla016137	Watermelon (97103) v1	cmawmB472
CmaCh19G003710	Csa3G910690	Cucumber (Chinese Long) v2	cmacuB511
CmaCh19G003710	MELO3C003369	Melon (DHL92) v3.5.1	cmameB473
CmaCh19G003710	ClCG09G012400	Watermelon (Charleston Gray)	cmawcgB440
CmaCh19G003710	CSPI03G47140	Wild cucumber (PI 183967)	cmacpiB518
CmaCh19G003710	CmoCh02G016280	Cucurbita moschata (Rifu)	cmacmoB525
CmaCh19G003710	CmoCh19G003820	Cucurbita moschata (Rifu)	cmacmoB512
CmaCh19G003710	Lsi05G000470	Bottle gourd (USVL1VR-Ls)	cmalsiB490
CmaCh19G003710	Cp4.1LG09g06670	Cucurbita pepo (Zucchini)	cmacpeB518
CmaCh19G003710	Cp4.1LG05g02040	Cucurbita pepo (Zucchini)	cmacpeB544
CmaCh19G003710	MELO3C003369.2	Melon (DHL92) v3.6.1	cmamedB547
CmaCh19G003710	CsaV3_3G049570	Cucumber (Chinese Long) v3	cmacucB0616
CmaCh19G003710	Cla97C09G175250	Watermelon (97103) v2	cmawmbB549
CmaCh19G003710	Bhi05G000356	Wax gourd	cmawgoB0660
CmaCh19G003710	CsGy3G044520	Cucumber (Gy14) v2	cgybcmaB377
CmaCh19G003710	Carg23649	Silver-seed gourd	carcmaB1426
CmaCh19G003710	Carg08816	Silver-seed gourd	carcmaB1083

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmaCh19G003710	CmaCh02G015850	Cucurbita maxima (Rimu)	cmacmaB453

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh19G003710	Cucurbita moschata (Rifu)	cmacmoB508
CmaCh19G003710	Cucurbita moschata (Rifu)	cmacmoB510
CmaCh19G003710	Cucurbita pepo (Zucchini)	cmacpeB522