CmaCh19G003490 (gene) Cucurbita maxima (Rimu)
The following sequences are available for this feature:
Legend: CDSexon Hold the cursor over a type above to highlight its positions in the sequence below.AGATGGTGGTCTCCTCCACTATTAACCGTAACTATAGCATCTGCAAAGTATTTCTTTCTGCATACTTTAAGAAAGAACACCGTTGCACAAGCTCGTAAAAATATTTCTCATCATTACGACCAGGTAGTATATGGATGCATCAGTTTCTTAGTCTTTTTCTTTTCGTCCTTAGATTCATGATATCTCTTCAATCCTATTCATATTCAATCAAAAGATAACTAGAATAAAACTGAAAAATAACAAACAAAAGAAATGTAAGATAACTCAAATAAGTATTAGATTGTAGCGTTTGAGTAAAGCAATGTTAAATAAATAAATTGAGACTAGAAGTGATCCTAAGATATAAAATTATGGTTAAAAACAAGAATTTATAGCTCCTAATAAAGTGAACATTTATTTTCTTTTGGTAACTTGATCATATGAACCTCAAAATTATATGTATTCAATCTCCTTAAAATTATAGAGATTTTGAATCTTGATGTGAAGAATTATAGAACAAATCACCGTATCAACCTCTCAATCTAATTACTAATATACCTTCAATATCCAATAACATTTCTAATTATTCTATCTTAATACCATTTGTATCAAATTATTCTCTCTTATTGAATAATTTATTTGGTTGTATAGAGAAATGAACTTTTTTCTCTTGATGTACTCATGTGCCATCTTTAAGGTTCGTATAACCAACTTTTATTTATTAAAAATTTAATAATCTATATGATGATTTGTTGTTCTATCACAAAATTTCTTGGGATAAAGAGGGAAGATGAAGCTTTGAGGATTGCACAATTGAGGAAAATGTGTGTTGTTATTAAGAAGGTGATTATTATTATTATTACACAACTATACATATTTATTTTCACTAATCTCACTTAGTTTATCCTAATATTACTAGGCAAGAATAAAAAAAAAAAAAAGAAAAAAAGAAAAAGAAAAAAGCATAAGGTTTTGGATATTGGGTGCGGTTGGGGAACTCTAGCTATTGAAATAGTAAAGTAAACTGGATGTCTCTACAGTGCCGTTACTTTGTCCAAACAATAATTGCAACATCTTGGCCTTCAAGTAATATCTCTTTCTTATGCACCTATTTTACTTCTTTCGATTGTTGTTTGAGTTAAGGTAGTTTCTTAGTTTCTTAACAATCTAGAGCTATCATAAAGTTTATCATGAAGTAGCATCCTACTTGATAATCAAGTGCTAACCTTAAGCTCATATTGAATTAGGGTAGCATCCGAATTACTTAAAAATCAAGGGCTAACTTAAGCATAACATGAAGCTTAATGACCTGATCATAATACTTGATAACATTCAATATCCTAAAGTGAGCTTAAGTTATATTAAACTTCTAAGCCTCCATAAATCTTGGTTAATCATTAGAGGCACTTCAGTCATTTCTCTTAAGCCTTAGCCTATACCCCTAACTTGATTTAAATTCTAAACTTGATCCAAACATCTTGAAATATAACATAACCCTTCATGTTCTTGTATATAGGCTTTACTTAAAATATTGGATCATTAGGAGGGTATTTGGACCTTGAAATATTTTAAAGGAATGTTAAGGTCATTTTGGTCATTTTACCACCTTAAACTTAGTTCGAACCCCAACCGTGATCAATAGTTCTAAAACTTTATATAATTCTTACACATTATAAAATAAGGCTTCATATAAAGTTTCATGATATTAGGAGATCAGTTGGGTAATTAATGAAAGGTAAGTTATTTGAGGGGCATTACAGTTATTTTACACCCTTACTTGGTTTCATTACTAATCATTTTGATCCAACCTTCTTATAGGATCCTATTGAGTTTCTTCTTTGCGACTATCCAGAATTGTCAAATACAACTATATATGATAGGATCCTATTGTGATGAGTTTTCAAATGAAATAAAGCAGTCATAATATGCCTGAATTAGTACTATAACATAATAATTATTTGATTAAACTATAGATTTAGTAGGTATCTAATAGATCACAAAATGTTTTAGATTCATGAACTTTGAATTTAGCTTAATGTCCTTAAACTTTAAAATAAAAAATTTATACTAAACTTTTAATTTTGTATCAAATAAGACATTAAACTTTTAACTTTTTGTTCGATAGATTCATAAATTTAAAAAAAAAAAAAATTTAATAAGTAGATGACTGTCACAACCTAAATTTTCGAGACTAAAAAGAAGAATGTGAAAGAAAAAAAAAGTAAAATAAAAGAAAAATAAAAATTCGATAAAATTTATATCAAAATAAAGAAAACAACACCAAAATTAAATACAAAAGAAAATCTAATTATAAGAATGTGTTCTTTAAATTTATTATAAAAGAGAAAAATGGGTTTGAGATACAATTGTAAAAAATAAATAAATAAATAAATAAAAAATGAAAAGAGACTGATACTACATAACGATCCCTTCTCTGATCATACAGCTTTCGAATGCTCCTTCACCTCGACCGACAACCTGCGAACACCCCGAAAAGAGAGGGGAAAGGGTATAAATATGTAAATGTACCGAGTAAGCAATCTATTTGTAAGCTTTCATCACATCCATGATTTAGCAAGTGACCATGGGCTTTACTCTAGGCAACAAGCGTATTGTTCTTACTATGCACAGTCTTGGATAGCTAGCTTAGCCTAAAAAGTAGTAACCGATATCCGAATATGAGACACTACTTTCATAGACTTCATATTAGGTAGGAATAACATGACGAGTGCTAGCCTACTCGTCATCCATGAGAGGTTAGCAAACGAATCAATCCCACAAGTCATTTAGTTGCCCAGGGTTGGGGGGCACAACACCCTATACGTGCCGCTCCATTGGTTTCCTACATGATCAAAGCTCTTCCATAGGATGAATCCTCCATGCAAGGTAACTACTAATTACCCGCATGATCAACACCCAACAACAGGACGCGTGTAGAGTAATCCAACAAACCATTGAGTCACACATCCATAATCAACCTCATGCTAACTCAACGGTACTGTACCAGAGTCAAGAGGGAAGTGGAGGTCCTCACACACTATCTACTGCTATCAGGCTAGGAGACTACTTTTGTCATTCCTTGATGTCGTAGAGGTTTACTAGGTTTTTAGAGGTATCTAGAAAGTTTAAATCACAACTCTCATTTTCAGGACGTTCGAGGTTAGCTCCTTGTGCTAAATTAATCTATGTGTGCACACAAGTCTACTAGAAACGTATTGACTTGGGTCAACAAGTAAATCGCACTAGCTGTAGCGCTCTAATCTTAATTGAGTTCTTTCATGGATGCTTTGATAGGGAGATATTCCTATCGATCACCTAAGCATGTAATCCATAATTTAAACTTCACCTTAGTAATATCTGGGAGCTGAGGAGGTCTCTTGGATTTCTAAGGCACCTAGGTCTCTTAACGTAGACTTTTTACTCTAGGCTGCTCTATTCTAATTCTTCAAGTCTTTCTTAGTTTGGAAGCACTAGGATCTATACCCTCTGACCGTCACTCACAATCTTAAGGTGCTAAGTGTATTGGAGGCGTACTAACCTATGTCATCATCTAGCCTTAACTCTTATGCCTTAGCTCTATGCAGATAAACATGCTCTATACGGAGAACATCAGTCAAACTCTTGGAGCTAGAACATATTGGACCATGCAAATATATATGCAAACATACAGTCAAGCAAGCTCAACATGGAGATAATATCTATCAATCACCCAGAGTACAAATTTTAATAGTCCGTCGTTTCTAACACGGCGAAAAACATATAAAACAACTTTCATCACAAATCTCGTCATAATCGCATTTTAGTAATTTCTTACATCATACATAACATATTCATCCATATTGCCCAACTCGTATTCTAGTCATGCTTATTCAATTTTTAGCTTTATAAATTACATAAAATAGCATGCCACTCGAAAATCTCCACCTGGGGACATAACAATAATTTTACCATAACATTCATACAATGCATGATCATAAAGAAAACGCTATTCAAAAGTCCTTAACATGCATTTTATAACCACTTGAGGTAATGAATGATCTCATGCCAGCACGTCCTTTCGATGCCTACAAGTATTATTTATCTAAATTTGGTGTGATTTCTTACTTGGTGAAGTGTGCCTTCCCAAACTAGCTTTTCCACTTGTTAGGGGCCCAAAGTTTCTAATTTCTCTCGTAGGTTTTAATTAAAGTAAAATTAGGGTTCTAATTTCTCGGATATTCAAGTCTCGGTGTTGAATCGAGTTGCATCTTGGTACACGAGTTAAATTGCGCGTTAGTTTGCGAATGCATGTTGAATTTAGCGCAATGTGTCATCTTCACCCGTTAGACACGTTGAACCATTCATAGTGCCACATGTGTTATTCACCAAACCAGCCGTGATTTATTAGATGGGTAAATCTATTTAAAAACATCTTAATGTTAATCTAACTATTTATTTTTTTTGTTTTTGGCGGTGGGATGATAGAAGCGGTTGGCCACGAATTCATGGAAGATTTTTTTGGTTCTTGTGAATAAGTGTTAGAGGACAATGGTCTTCTTGTTCTACAGGTTTAATTAATTTTTTTTATTTTTTACTTATAATTAATTCTTTTAATTACTCTTTATTTATAATTATTATTATTTTTTTGCATTAGTTCATATCAGTGCCAGAAGAATCTTATAAAGAGTATCGACTAAGTGCTGGTTTTATAAAAGAATATATATTTCAAGGAGGATGCCTTCCATCATTAAGTAGAATAACAATGGCCATGACTTCTGCCTTCTGCATCAAGGCTTTGGTAAATAGT AGATGGTGGTCTCCTCCACTATTAACCGTAACTATAGCATCTGCAAAGTATTTCTTTCTGCATACTTTAAGAAAGAACACCGTTGCACAAGCTCGTAAAAATATTTCTCATCATTACGACCAGAGGGAAGATGAAGCTTTGAGGATTGCACAATTGAGGAAAATGTGTGTTGTTATTAAGAAGTTCATATCAGTGCCAGAAGAATCTTATAAAGAGTATCGACTAAGTGCTGGTTTTATAAAAGAATATATATTTCAAGGAGGATGCCTTCCATCATTAAGTAGAATAACAATGGCCATGACTTCTGCCTTCTGCATCAAGGCTTTGGTAAATAGT AGATGGTGGTCTCCTCCACTATTAACCGTAACTATAGCATCTGCAAAGTATTTCTTTCTGCATACTTTAAGAAAGAACACCGTTGCACAAGCTCGTAAAAATATTTCTCATCATTACGACCAGAGGGAAGATGAAGCTTTGAGGATTGCACAATTGAGGAAAATGTGTGTTGTTATTAAGAAGTTCATATCAGTGCCAGAAGAATCTTATAAAGAGTATCGACTAAGTGCTGGTTTTATAAAAGAATATATATTTCAAGGAGGATGCCTTCCATCATTAAGTAGAATAACAATGGCCATGACTTCTGCCTTCTGCATCAAGGCTTTGGTAAATAGT RWWSPPLLTVTIASAKYFFLHTLRKNTVAQARKNISHHYDQREDEALRIAQLRKMCVVIKKFISVPEESYKEYRLSAGFIKEYIFQGGCLPSLSRITMAMTSAFCIKALVNS
BLAST of CmaCh19G003490 vs. TrEMBL
Match: A0A0A0LIH3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G172480 PE=4 SV=1) HSP 1 Score: 79.0 bits (193), Expect = 4.2e-12 Identity = 42/81 (51.85%), Postives = 50/81 (61.73%), Query Frame = 1
BLAST of CmaCh19G003490 vs. TrEMBL
Match: A0A0B0N435_GOSAR (Ribosomal L11 methyltransferase OS=Gossypium arboreum GN=F383_34635 PE=4 SV=1) HSP 1 Score: 77.0 bits (188), Expect = 1.6e-11 Identity = 54/136 (39.71%), Postives = 70/136 (51.47%), Query Frame = 1
BLAST of CmaCh19G003490 vs. TrEMBL
Match: A0A0D9XYC6_9ORYZ (Uncharacterized protein OS=Leersia perrieri PE=4 SV=1) HSP 1 Score: 77.0 bits (188), Expect = 1.6e-11 Identity = 40/91 (43.96%), Postives = 57/91 (62.64%), Query Frame = 1
BLAST of CmaCh19G003490 vs. TrEMBL
Match: A0A059B2Y2_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_H02976 PE=4 SV=1) HSP 1 Score: 77.0 bits (188), Expect = 1.6e-11 Identity = 45/112 (40.18%), Postives = 63/112 (56.25%), Query Frame = 1
BLAST of CmaCh19G003490 vs. TrEMBL
Match: A0A0A0LKK5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G171950 PE=4 SV=1) HSP 1 Score: 76.6 bits (187), Expect = 2.1e-11 Identity = 40/81 (49.38%), Postives = 51/81 (62.96%), Query Frame = 1
BLAST of CmaCh19G003490 vs. TAIR10
Match: AT3G23530.1 (AT3G23530.1 Cyclopropane-fatty-acyl-phospholipid synthase) HSP 1 Score: 74.3 bits (181), Expect = 5.2e-14 Identity = 36/64 (56.25%), Postives = 49/64 (76.56%), Query Frame = 1
BLAST of CmaCh19G003490 vs. TAIR10
Match: AT3G23510.1 (AT3G23510.1 Cyclopropane-fatty-acyl-phospholipid synthase) HSP 1 Score: 67.4 bits (163), Expect = 6.4e-12 Identity = 33/64 (51.56%), Postives = 47/64 (73.44%), Query Frame = 1
BLAST of CmaCh19G003490 vs. TAIR10
Match: AT3G23480.2 (AT3G23480.2 Cyclopropane-fatty-acyl-phospholipid synthase) HSP 1 Score: 64.7 bits (156), Expect = 4.2e-11 Identity = 32/64 (50.00%), Postives = 45/64 (70.31%), Query Frame = 1
BLAST of CmaCh19G003490 vs. TAIR10
Match: AT3G23470.1 (AT3G23470.1 Cyclopropane-fatty-acyl-phospholipid synthase) HSP 1 Score: 62.0 bits (149), Expect = 2.7e-10 Identity = 29/57 (50.88%), Postives = 41/57 (71.93%), Query Frame = 1
BLAST of CmaCh19G003490 vs. TAIR10
Match: AT3G23460.1 (AT3G23460.1 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein) HSP 1 Score: 55.8 bits (133), Expect = 1.9e-08 Identity = 30/80 (37.50%), Postives = 45/80 (56.25%), Query Frame = 1
BLAST of CmaCh19G003490 vs. NCBI nr
Match: gi|659133660|ref|XP_008466845.1| (PREDICTED: probable (S)-tetrahydroprotoberberine N-methyltransferase 2, partial [Cucumis melo]) HSP 1 Score: 82.4 bits (202), Expect = 5.5e-13 Identity = 42/82 (51.22%), Postives = 53/82 (64.63%), Query Frame = 1
BLAST of CmaCh19G003490 vs. NCBI nr
Match: gi|1012240925|ref|XP_015940861.1| (PREDICTED: uncharacterized protein LOC107466398 isoform X2 [Arachis duranensis]) HSP 1 Score: 81.3 bits (199), Expect = 1.2e-12 Identity = 44/102 (43.14%), Postives = 66/102 (64.71%), Query Frame = 1
BLAST of CmaCh19G003490 vs. NCBI nr
Match: gi|778668693|ref|XP_011649139.1| (PREDICTED: uncharacterized protein LOC105434591 [Cucumis sativus]) HSP 1 Score: 79.0 bits (193), Expect = 6.0e-12 Identity = 42/81 (51.85%), Postives = 50/81 (61.73%), Query Frame = 1
BLAST of CmaCh19G003490 vs. NCBI nr
Match: gi|700206459|gb|KGN61578.1| (hypothetical protein Csa_2G172480 [Cucumis sativus]) HSP 1 Score: 79.0 bits (193), Expect = 6.0e-12 Identity = 42/81 (51.85%), Postives = 50/81 (61.73%), Query Frame = 1
BLAST of CmaCh19G003490 vs. NCBI nr
Match: gi|778668696|ref|XP_011649140.1| (PREDICTED: uncharacterized protein LOC101213610 [Cucumis sativus]) HSP 1 Score: 79.0 bits (193), Expect = 6.0e-12 Identity = 42/81 (51.85%), Postives = 50/81 (61.73%), Query Frame = 1
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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