CmaCh19G003370 (gene) Cucurbita maxima (Rimu)

Overview
NameCmaCh19G003370
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu))
DescriptionUbiquitin carboxyl-terminal hydrolase family protein
LocationCma_Chr19 : 3464887 .. 3466062 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAATGGAAAAACTATGTTTCTACGCCTAAATCGTGGAATACATGTTTTTAATCATAAGGAGTCAGGTTTTCTTTGGGTCTTGATGAGGCACAAATCTAGCGGTGGAATGAGACCGAAGAGGAAAATATATTATAGAGTTGATGAACTTGACAAAGTTATGGAGTTGCAGAAAAAGCCATCCCTTATACTGAAGCTTATAAACATTATCCAATCTCAAAAGCACAAGTTTATATTCTTGAGGGACTTGGAGAAAGAAGTGGGATTTGTCCAAAAATGGAATTTCATGGCTGTTATTGAGAGGTACTCTTCGATTTTTTATGTTGATTCTGGAAGCTGTAGAAGGCCTTATGTTAGGCTCACCAATAAAGCTGAAAAGATTGCTAGTGAAGAACATAAGGTTAAGAGTTCAATGGAACCAATCTTAGTAAAGAATTTGAGGAAGCTGTTGATGCTGTCAGTTGACTGTCGAGTACCGCTCGAAAATATAGAGTTCATCGCGTCTGAATTGGGTTTGCCTTGTGACTTCAAAACTTCATTGATTCCTGAGTACCCTGAATTCTTTTCAGTGAAGGAAGTTGATGGGAAAGCCCACCTACATTTGGAGAATTGGGATTCTTCGCTCGCAATCAGTGCTCGGGAGGAAGGATTTGGTAGAGCCAGAGATGTATCTTCTTGTGAGAATCGAAAAAGAGTTCGAATATCAAAGGATGGCAACTTTTCTGGTCCATTTGCATTCAAGATGTGTTTTCCTCCAGGCTTTAGGCCAAACATGAGTTACCTTGAACATCTTGAAAGGTGGCAGAAAATGGATTTTCCTTCTCCATACTTGAACGCGAGGAGATTTGACGCAGCTGATCCGAAGGCAAGAAAGAGAGTCGTTGCTGTTCTTCACGAGTTTCTAAGCTTGACAATGGAAAAAAGGATGAGATCAACACAATTGGATGCATTTCATAGGGAGTTTCTTCTTCCATCAAAACTATTGCTGTGCTTGTTAAAGCATCAAGGAATCTTCTACATCACTAATAAAGGTGCAAGGAGTACAGTACTTCTGAAAGAAGCCTATGAAGGGTCAGTTTTGAGTGATAAATGCCCCTTGCTGTTGCACTTTGATAGATTCCTTTCACTCTGTGGTAGGAGGGACAAGCATTGCAATTCACCCCAGGTTCGTTTCTAG

mRNA sequence

ATGAATGGAAAAACTATGTTTCTACGCCTAAATCGTGGAATACATGTTTTTAATCATAAGGAGTCAGGTTTTCTTTGGGTCTTGATGAGGCACAAATCTAGCGGTGGAATGAGACCGAAGAGGAAAATATATTATAGAGTTGATGAACTTGACAAAGTTATGGAGTTGCAGAAAAAGCCATCCCTTATACTGAAGCTTATAAACATTATCCAATCTCAAAAGCACAAGTTTATATTCTTGAGGGACTTGGAGAAAGAAGTGGGATTTGTCCAAAAATGGAATTTCATGGCTGTTATTGAGAGGTACTCTTCGATTTTTTATGTTGATTCTGGAAGCTGTAGAAGGCCTTATGTTAGGCTCACCAATAAAGCTGAAAAGATTGCTAGTGAAGAACATAAGGTTAAGAGTTCAATGGAACCAATCTTAGTAAAGAATTTGAGGAAGCTGTTGATGCTGTCAGTTGACTGTCGAGTACCGCTCGAAAATATAGAGTTCATCGCGTCTGAATTGGGTTTGCCTTGTGACTTCAAAACTTCATTGATTCCTGAGTACCCTGAATTCTTTTCAGTGAAGGAAGTTGATGGGAAAGCCCACCTACATTTGGAGAATTGGGATTCTTCGCTCGCAATCAGTGCTCGGGAGGAAGGATTTGGTAGAGCCAGAGATGTATCTTCTTGTGAGAATCGAAAAAGAGTTCGAATATCAAAGGATGGCAACTTTTCTGGTCCATTTGCATTCAAGATGTGTTTTCCTCCAGGCTTTAGGCCAAACATGAGTTACCTTGAACATCTTGAAAGGTGGCAGAAAATGGATTTTCCTTCTCCATACTTGAACGCGAGGAGATTTGACGCAGCTGATCCGAAGGCAAGAAAGAGAGTCGTTGCTGTTCTTCACGAGTTTCTAAGCTTGACAATGGAAAAAAGGATGAGATCAACACAATTGGATGCATTTCATAGGGAGTTTCTTCTTCCATCAAAACTATTGCTGTGCTTGTTAAAGCATCAAGGAATCTTCTACATCACTAATAAAGGTGCAAGGAGTACAGTACTTCTGAAAGAAGCCTATGAAGGGTCAGTTTTGAGTGATAAATGCCCCTTGCTGTTGCACTTTGATAGATTCCTTTCACTCTGTGGTAGGAGGGACAAGCATTGCAATTCACCCCAGGTTCGTTTCTAG

Coding sequence (CDS)

ATGAATGGAAAAACTATGTTTCTACGCCTAAATCGTGGAATACATGTTTTTAATCATAAGGAGTCAGGTTTTCTTTGGGTCTTGATGAGGCACAAATCTAGCGGTGGAATGAGACCGAAGAGGAAAATATATTATAGAGTTGATGAACTTGACAAAGTTATGGAGTTGCAGAAAAAGCCATCCCTTATACTGAAGCTTATAAACATTATCCAATCTCAAAAGCACAAGTTTATATTCTTGAGGGACTTGGAGAAAGAAGTGGGATTTGTCCAAAAATGGAATTTCATGGCTGTTATTGAGAGGTACTCTTCGATTTTTTATGTTGATTCTGGAAGCTGTAGAAGGCCTTATGTTAGGCTCACCAATAAAGCTGAAAAGATTGCTAGTGAAGAACATAAGGTTAAGAGTTCAATGGAACCAATCTTAGTAAAGAATTTGAGGAAGCTGTTGATGCTGTCAGTTGACTGTCGAGTACCGCTCGAAAATATAGAGTTCATCGCGTCTGAATTGGGTTTGCCTTGTGACTTCAAAACTTCATTGATTCCTGAGTACCCTGAATTCTTTTCAGTGAAGGAAGTTGATGGGAAAGCCCACCTACATTTGGAGAATTGGGATTCTTCGCTCGCAATCAGTGCTCGGGAGGAAGGATTTGGTAGAGCCAGAGATGTATCTTCTTGTGAGAATCGAAAAAGAGTTCGAATATCAAAGGATGGCAACTTTTCTGGTCCATTTGCATTCAAGATGTGTTTTCCTCCAGGCTTTAGGCCAAACATGAGTTACCTTGAACATCTTGAAAGGTGGCAGAAAATGGATTTTCCTTCTCCATACTTGAACGCGAGGAGATTTGACGCAGCTGATCCGAAGGCAAGAAAGAGAGTCGTTGCTGTTCTTCACGAGTTTCTAAGCTTGACAATGGAAAAAAGGATGAGATCAACACAATTGGATGCATTTCATAGGGAGTTTCTTCTTCCATCAAAACTATTGCTGTGCTTGTTAAAGCATCAAGGAATCTTCTACATCACTAATAAAGGTGCAAGGAGTACAGTACTTCTGAAAGAAGCCTATGAAGGGTCAGTTTTGAGTGATAAATGCCCCTTGCTGTTGCACTTTGATAGATTCCTTTCACTCTGTGGTAGGAGGGACAAGCATTGCAATTCACCCCAGGTTCGTTTCTAG

Protein sequence

MNGKTMFLRLNRGIHVFNHKESGFLWVLMRHKSSGGMRPKRKIYYRVDELDKVMELQKKPSLILKLINIIQSQKHKFIFLRDLEKEVGFVQKWNFMAVIERYSSIFYVDSGSCRRPYVRLTNKAEKIASEEHKVKSSMEPILVKNLRKLLMLSVDCRVPLENIEFIASELGLPCDFKTSLIPEYPEFFSVKEVDGKAHLHLENWDSSLAISAREEGFGRARDVSSCENRKRVRISKDGNFSGPFAFKMCFPPGFRPNMSYLEHLERWQKMDFPSPYLNARRFDAADPKARKRVVAVLHEFLSLTMEKRMRSTQLDAFHREFLLPSKLLLCLLKHQGIFYITNKGARSTVLLKEAYEGSVLSDKCPLLLHFDRFLSLCGRRDKHCNSPQVRF
Homology
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BLAST of CmaCh19G003370 vs. Swiss-Prot
Match: RPD1_ARATH (Protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Arabidopsis thaliana GN=RPD1 PE=1 SV=1)

HSP 1 Score: 137.1 bits (344), Expect = 4.1e-31
Identity = 112/346 (32.37%), Postives = 179/346 (51.73%), Query Frame = 1 

Query: 27  VLMRHKSSGGMRPKRKIYYRVDELDKVMELQKKPSLILKLINIIQSQKHKFI---FLRDL 86
           +L++  S     PK++   R    D  ME++KK   ++K  ++I SQ +  I    L  L
Sbjct: 29  ILVKPFSQSTTIPKKQDRVRDHGYDNYMEVEKKIRKVVKFHSLILSQPNHTIAISLLDTL 88

Query: 87  EKEVGFVQKWNFM-AVIERYSSIFYVDSGSCRRP-YVRLTNKAEKIASEEHKVKSSMEPI 146
            + +G   K +   A + ++  +F +     +R  Y RLT KA      EH+      P 
Sbjct: 89  ARRLGLGFKQHEPGAFLLKFPHVFEIYEHPVQRILYCRLTRKALDQIRHEHEAVLDQIPD 148

Query: 147 LVKNLRKLLMLSVDCRVPLENIEFIASELGLPCDFKTSLIPEYPEFFSVKEVDGK----A 206
            V  LRKL+M+S   R+ LE++    +E GLP DF+ S+I ++P+FF +  +DG+     
Sbjct: 149 AVTRLRKLVMMSNTGRIRLEHVRIARTEFGLPEDFEYSVILKHPQFFRL--IDGEETRDK 208

Query: 207 HLHLENWDSSLAISAREEGFGRARDVSSCENRKRVRISKDGNFSGPFAFKMCFPPGFRPN 266
           ++ +   D +L+I A E    R R++   E R +   ++D  FS    F + FPPGF+  
Sbjct: 209 YIEIVEKDPNLSICAIE----RVREI---EYRTKGIDAEDVRFS----FVVNFPPGFKIG 268

Query: 267 MSYLEHLERWQKMDFPSPYLNARRFD----AADPKARKRVVAVLHEFLSLTMEKRMRSTQ 326
             +   + +WQ++ + SPY +   +D     A  +  KR VA +HE LSLT+EK++   +
Sbjct: 269 KYFRIAVWKWQRLPYWSPYEDISGYDLRSMEAQNRLEKRSVACIHELLSLTVEKKITLER 328

Query: 327 LDAFHREFLLPSKLLLCLLKHQGIFYIT---NKGARSTVLLKEAYE 357
           +  F     LP KL   LL+HQGIFYI+   N G   TV L+E Y+
Sbjct: 329 IAHFRNVMNLPKKLKEFLLQHQGIFYISTRGNYGKLHTVFLREGYK 361

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BLAST of CmaCh19G003370 vs. TrEMBL
Match: A0A0A0LVT2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G164710 PE=4 SV=1)

HSP 1 Score: 686.0 bits (1769), Expect = 2.6e-194
Identity = 347/398 (87.19%), Postives = 361/398 (90.70%), Query Frame = 1 

Query: 1   MNGKTMFLRLNR--------GIHVFNHKESGFLWVLMRHKSSGGMRPKRKIYYRVDELDK 60
           MNGK+MFLRLNR          HVF+HK+S FLWVLMRHKSSGGMRPKRKIYYRV ELDK
Sbjct: 1   MNGKSMFLRLNRYPNSYPISETHVFDHKKSAFLWVLMRHKSSGGMRPKRKIYYRVAELDK 60

Query: 61  VMELQKKPSLILKLINIIQSQKHKFIFLRDLEKEVGFVQKWNFMAVIERYSSIFYVDSGS 120
           VM+LQKKPSLILKLINIIQSQK+KFI LRDLEKEVGFVQKWNFMAVIE+YSSIFYV SGS
Sbjct: 61  VMDLQKKPSLILKLINIIQSQKNKFILLRDLEKEVGFVQKWNFMAVIEKYSSIFYVGSGS 120

Query: 121 CR-RPYVRLTNKAEKIASEEHKVKSSMEPILVKNLRKLLMLSVDCRVPLENIEFIASELG 180
            R  PYVRL+NKAE IASEE KVKS+MEPILVKNLRKLLMLSVDCRVPLENIEFIASELG
Sbjct: 121 SRVPPYVRLSNKAEMIASEEDKVKSAMEPILVKNLRKLLMLSVDCRVPLENIEFIASELG 180

Query: 181 LPCDFKTSLIPEYPEFFSVKEVDGKAHLHLENWDSSLAISAREEGFGRARDVSSCENRKR 240
           LPCDFKTSLIP+YPEFFSVKEVDGKAHLHLENWDSSLAI ARE+ F +ARD+SSC   KR
Sbjct: 181 LPCDFKTSLIPKYPEFFSVKEVDGKAHLHLENWDSSLAICAREDRFAKARDLSSCGYGKR 240

Query: 241 VRISKDGNFSGPFAFKMCFPPGFRPNMSYLEHLERWQKMDFPSPYLNARRFDAADPKARK 300
           VRISKDGNFSGPFAFKMCFP GFRPN SYLEHLERWQKMDFPSPYLNARRFD ADPK RK
Sbjct: 241 VRISKDGNFSGPFAFKMCFPSGFRPNTSYLEHLERWQKMDFPSPYLNARRFDVADPKTRK 300

Query: 301 RVVAVLHEFLSLTMEKRMRSTQLDAFHREFLLPSKLLLCLLKHQGIFYITNKGARSTVLL 360
           RVVAVLHEFLSLTMEKRM STQLDAFHREFLLPSKLLLCL+KHQGIFYITNKGARSTV L
Sbjct: 301 RVVAVLHEFLSLTMEKRMTSTQLDAFHREFLLPSKLLLCLVKHQGIFYITNKGARSTVFL 360

Query: 361 KEAYEGSVLSDKCPLLLHFDRFLSLCGRRDKHCNSPQV 390
           KE YEGS+L DKCPLLLH DRFLSLCGRRD  CNS QV
Sbjct: 361 KEGYEGSILVDKCPLLLHSDRFLSLCGRRDMSCNSHQV 398

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BLAST of CmaCh19G003370 vs. TrEMBL
Match: M5WG21_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa007448mg PE=4 SV=1)

HSP 1 Score: 523.9 bits (1348), Expect = 1.7e-145
Identity = 261/357 (73.11%), Postives = 296/357 (82.91%), Query Frame = 1 

Query: 25  LWVLMRHKSSGGMRPKRKIYYRVDELDKVMELQKKPSLILKLINIIQSQKHKFIFLRDLE 84
           +WV ++HKSSGG RPKRK+Y+RV ELDKVM+ QKKP+LIL+L +IIQSQKH+ + LRDLE
Sbjct: 1   MWVPVKHKSSGGRRPKRKVYHRVHELDKVMDFQKKPALILQLKSIIQSQKHQSLLLRDLE 60

Query: 85  KEVGFVQKWNFMAVIERYSSIFYVDSGSCRRPYVRLTNKAEKIASEEHKVKSSMEPILVK 144
           KEVGFVQKWNFMA IE+Y SIFYV  G+   P+V L  KA+K+A EE + K  MEPILVK
Sbjct: 61  KEVGFVQKWNFMAAIEKYPSIFYVGGGNRTPPFVTLAEKAKKVAREEAEAKDLMEPILVK 120

Query: 145 NLRKLLMLSVDCRVPLENIEFIASELGLPCDFKTSLIPEYPEFFSVKEVDGKAHLHLENW 204
           NLRKLLMLSVDCRVPLENIEFI SELGLP DFK SL+P+YPE FSVKEV+GK HLHLENW
Sbjct: 121 NLRKLLMLSVDCRVPLENIEFIESELGLPNDFKKSLLPKYPEIFSVKEVNGKLHLHLENW 180

Query: 205 DSSLAISAREEGFGRARDVSSCENRKRVRISKDGNFSGPFAFKMCFPPGFRPNMSYLEHL 264
           DSS+A++AREE  G     +      +VRISKDGNF GP AF+M FP GFRPN SYLE L
Sbjct: 181 DSSIAVTAREEQLGGEGISAPSGLGNKVRISKDGNFLGPHAFRMSFPAGFRPNTSYLEQL 240

Query: 265 ERWQKMDFPSPYLNARRFDAADPKARKRVVAVLHEFLSLTMEKRMRSTQLDAFHREFLLP 324
           ERWQKMDFPSPYLNARRFD ADPK RKRVVAVLHE LSLTM+KRM S QLDAFH E+ LP
Sbjct: 241 ERWQKMDFPSPYLNARRFDIADPKVRKRVVAVLHELLSLTMQKRMTSAQLDAFHSEYFLP 300

Query: 325 SKLLLCLLKHQGIFYITNKGARSTVLLKEAYEGSVLSDKCPLLLHFDRFLSLCGRRD 382
           SKLLLCL+KH GIFYITNKGARSTV LKEAY+G  L +KCPLLL  D+F++L GRR+
Sbjct: 301 SKLLLCLIKHPGIFYITNKGARSTVFLKEAYDGLNLINKCPLLLFNDKFVALSGRRE 357

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BLAST of CmaCh19G003370 vs. TrEMBL
Match: A0A067JMI5_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_22647 PE=4 SV=1)

HSP 1 Score: 521.2 bits (1341), Expect = 1.1e-144
Identity = 266/369 (72.09%), Postives = 311/369 (84.28%), Query Frame = 1 

Query: 25  LWVLMRHKSSGGMRPKRKIYYRVDELDKVMELQKKPSLILKLINIIQSQKHKFIFLRDLE 84
           +WV ++ KSSGG RPK+KIY+RV ELD+VM+LQKKPSLIL L +IIQSQKH+ + LRDLE
Sbjct: 1   MWVSVKEKSSGGRRPKKKIYHRVHELDRVMDLQKKPSLILHLKSIIQSQKHQCLLLRDLE 60

Query: 85  KEVGFVQKWNFMAVIERYSSIFYVDSGSCRRP-YVRLTNKAEKIASEEHKVKSSMEPILV 144
           K+VGFVQKWNFMAV+E+Y SIF V  GS R P +V LT KA KIA++EH+ + SMEPILV
Sbjct: 61  KQVGFVQKWNFMAVLEKYPSIFRVGGGSDRTPPFVTLTEKAIKIANQEHEARESMEPILV 120

Query: 145 KNLRKLLMLSVDCRVPLENIEFIASELGLPCDFKTSLIPEYPEFFSVKEVDGKAHLHLEN 204
           +NLRKLLM+SVDCRVPLE IEFI +ELGLP  FK SLIP+YPE+FSVK V+GKA+LHLEN
Sbjct: 121 RNLRKLLMMSVDCRVPLEKIEFIGNELGLPQGFKNSLIPKYPEYFSVKNVNGKAYLHLEN 180

Query: 205 WDSSLAISAREEGFGRARDVSSCENRKRVRISKDGNFSGPFAFKMCFPPGFRPNMSYLEH 264
           WDSSLAI+AREE        +S   +K+VRISKDGNF GPFAF+M FP GFRPN SYLE 
Sbjct: 181 WDSSLAITAREERLSLEGVSASNPPKKKVRISKDGNFLGPFAFRMRFPAGFRPNASYLEE 240

Query: 265 LERWQKMDFPSPYLNARRFDAADPKARKRVVAVLHEFLSLTMEKRMRSTQLDAFHREFLL 324
           LERWQ+++FPSPYLNARRFDAADPKARKRVVAVLHE LSLT+EKRM S QLDAFH E LL
Sbjct: 241 LERWQRLEFPSPYLNARRFDAADPKARKRVVAVLHELLSLTIEKRMTSLQLDAFHSESLL 300

Query: 325 PSKLLLCLLKHQGIFYITNKGARSTVLLKEAYEGSVLSDKCPLLLHFDRFLSLCGRRDKH 384
           PS+LLLCL+K+ GIFYITNKGARSTV LKEAY+GS L DKCPLLL  D+F++L GRR+ +
Sbjct: 301 PSRLLLCLVKNPGIFYITNKGARSTVFLKEAYDGSNLIDKCPLLLFNDKFVALSGRRESN 360

Query: 385 -CNSPQVRF 392
            CN  ++RF
Sbjct: 361 FCN--EMRF 367

[Close]
BLAST of CmaCh19G003370 vs. TrEMBL
Match: F6HJ48_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_02s0087g00260 PE=4 SV=1)

HSP 1 Score: 511.1 bits (1315), Expect = 1.2e-141
Identity = 254/364 (69.78%), Postives = 305/364 (83.79%), Query Frame = 1 

Query: 23  GFLWVLMRHKSSGGMRPKRKIYYRVDELDKVMELQKKPSLILKLINIIQSQKHKFIFLRD 82
           G +WV + H SSGG RPK+KIY+RV ELD+VM+L+KKP LIL+L +IIQSQKH+ + LRD
Sbjct: 10  GSVWVQIMHISSGGRRPKKKIYHRVHELDRVMDLKKKPCLILQLKSIIQSQKHQSLLLRD 69

Query: 83  LEKEVGFVQKWNFMAVIERYSSIFYVDSGSCRRPYVRLTNKAEKIASEEHKVKSSMEPIL 142
           LEK+VGFV KWNFMAVIE+Y SIF V+ G+   P V LT KA++IA EE + +  MEPIL
Sbjct: 70  LEKQVGFVHKWNFMAVIEKYPSIFRVNGGNRTPPSVELTEKAKRIADEETEARKQMEPIL 129

Query: 143 VKNLRKLLMLSVDCRVPLENIEFIASELGLPCDFKTSLIPEYPEFFSVKEVDGKAHLHLE 202
           V+NLRKLLM+SVDCRVPLENIEFI SELGLP DFK +LIP+YPEFFSVK+ +G+A+L LE
Sbjct: 130 VENLRKLLMMSVDCRVPLENIEFIESELGLPQDFKETLIPKYPEFFSVKDFNGRAYLQLE 189

Query: 203 NWDSSLAISAREEGFGRARDVSSCENRKRVRISKDGNFSGPFAFKMCFPPGFRPNMSYLE 262
           NWDSSLA++ARE+ F R R + S  + ++ R+SKDGNFSGP+AF M +P GFRPNMSYLE
Sbjct: 190 NWDSSLAVTAREKRFARERVLDSVGHARKARVSKDGNFSGPYAFLMSYPAGFRPNMSYLE 249

Query: 263 HLERWQKMDFPSPYLNARRFDAADPKARKRVVAVLHEFLSLTMEKRMRSTQLDAFHREFL 322
            ++RWQKM+FPSPYLNARRF+AADPKARKRVVAVLHE LSLTMEKRM S QLDAFH EFL
Sbjct: 250 EVQRWQKMEFPSPYLNARRFEAADPKARKRVVAVLHELLSLTMEKRMTSAQLDAFHSEFL 309

Query: 323 LPSKLLLCLLKHQGIFYITNKGARSTVLLKEAYEGSVLSDKCPLLLHFDRFLSLCGRRDK 382
           LP++LLLCL+KH GIFYITNKGARSTV LKEAY+GS L +K PLL   ++F++L GRR+ 
Sbjct: 310 LPARLLLCLIKHHGIFYITNKGARSTVFLKEAYDGSNLIEKSPLLGFNNKFVALSGRRES 369

Query: 383 H-CN 386
             CN
Sbjct: 370 TLCN 373

[Close]
BLAST of CmaCh19G003370 vs. TrEMBL
Match: V4T294_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10020719mg PE=4 SV=1)

HSP 1 Score: 510.4 bits (1313), Expect = 2.0e-141
Identity = 258/363 (71.07%), Postives = 303/363 (83.47%), Query Frame = 1 

Query: 25  LWVLMRHKSSGGMRPKRKIYYRVDELDKVMELQKKPSLILKLINIIQSQKHKFIFLRDLE 84
           +WV M+ KS+GG R K+KIY RV ELD+VMELQKKPSLIL+L +IIQSQK K + LRDLE
Sbjct: 1   MWVPMKQKSTGGWRSKKKIYRRVHELDRVMELQKKPSLILQLKSIIQSQKQKCL-LRDLE 60

Query: 85  KEVGFVQKWNFMAVIERYSSIFYVDSGSCRRP-YVRLTNKAEKIASEEHKVKSSMEPILV 144
           K+VGFV KWNFMAVIE+Y SIF+V  GS R+P +V LT KAEKIA EE   +  MEPILV
Sbjct: 61  KQVGFVHKWNFMAVIEKYPSIFHVGGGSNRKPPFVTLTQKAEKIADEEEVARELMEPILV 120

Query: 145 KNLRKLLMLSVDCRVPLENIEFIASELGLPCDFKTSLIPEYPEFFSVKEVDGKAHLHLEN 204
           KNLRKLLM+SVDCRVPLE IEFI SELGLP DFK + +P+Y +FF+VK+ +GK +L+L+N
Sbjct: 121 KNLRKLLMMSVDCRVPLEKIEFIESELGLPQDFKKAFLPKYDDFFTVKDTNGKPYLYLQN 180

Query: 205 WDSSLAISAREEGFGRARDVSSCENRKRVRISKDGNFSGPFAFKMCFPPGFRPNMSYLEH 264
           WD+SLA++AREE   R   + S   +KRVRI+KDGN+SGP AFK+CFP GFRPN SYLE 
Sbjct: 181 WDASLAVTAREERLAREGVLDSAGAQKRVRITKDGNYSGPNAFKICFPAGFRPNTSYLEQ 240

Query: 265 LERWQKMDFPSPYLNARRFDAADPKARKRVVAVLHEFLSLTMEKRMRSTQLDAFHREFLL 324
           LERWQ+M+FPSPYLNARRF+ ADPKARKRVVAVLHE LSLTMEKRM S QLDAFH E++L
Sbjct: 241 LERWQRMEFPSPYLNARRFELADPKARKRVVAVLHELLSLTMEKRMTSAQLDAFHSEYML 300

Query: 325 PSKLLLCLLKHQGIFYITNKGARSTVLLKEAYEGSVLSDKCPLLLHFDRFLSLCGRRD-K 384
           P KLLLCL+KH GIFYITNKGARSTVLLKEAY+GS L DKCPLLL+ D+F++L GRR+  
Sbjct: 301 PHKLLLCLIKHHGIFYITNKGARSTVLLKEAYDGSNLIDKCPLLLYNDKFVALSGRREIN 360

Query: 385 HCN 386
            CN
Sbjct: 361 SCN 362

[Close]
BLAST of CmaCh19G003370 vs. TAIR10
Match: AT1G79120.1 (AT1G79120.1 Ubiquitin carboxyl-terminal hydrolase family protein)

HSP 1 Score: 492.3 bits (1266), Expect = 2.8e-139
Identity = 245/357 (68.63%), Postives = 291/357 (81.51%), Query Frame = 1 

Query: 26  WVLMRHKSSGG-MRPKRKIYYRVDELDKVMELQKKPSLILKLINIIQSQKHKFIFLRDLE 85
           +V +RHKS GG  RPK+K+Y+RV +LDK ++L KKPSLIL+L +IIQ+QKH  + LRDLE
Sbjct: 43  FVQVRHKSGGGGWRPKQKVYHRVHDLDKAIDLNKKPSLILQLKSIIQAQKHGSLLLRDLE 102

Query: 86  KEVGFVQKWNFMAVIERYSSIFYVDSGSCRRPYVRLTNKAEKIASEEHKVKSSMEPILVK 145
           K VGFV KWN MA IE+Y +IFYV  G    P+V LT KA+KIA+EE +   SMEPILV 
Sbjct: 103 KHVGFVHKWNLMAAIEKYPTIFYVGGGHKEPPFVMLTEKAKKIAAEESEATESMEPILVN 162

Query: 146 NLRKLLMLSVDCRVPLENIEFIASELGLPCDFKTSLIPEYPEFFSVKEVDGKAHLHLENW 205
           NLRKLLM+SVDCRVPLE +EFI S +GLP DFK++LIP+Y EFFS+K ++GK +L LENW
Sbjct: 163 NLRKLLMMSVDCRVPLEKVEFIQSAMGLPQDFKSTLIPKYTEFFSLKVINGKVNLVLENW 222

Query: 206 DSSLAISAREEGFGRARDVSSCENRKRVRISKDGNFSGPFAFKMCFPPGFRPNMSYLEHL 265
           DSSLAI+ARE+   R     S  +RKRVRI+KDGNF G  AFK+ FPPGFRPN SYLE  
Sbjct: 223 DSSLAITAREDRLSREGFSESVGDRKRVRITKDGNFLGRNAFKISFPPGFRPNASYLEEF 282

Query: 266 ERWQKMDFPSPYLNARRFDAADPKARKRVVAVLHEFLSLTMEKRMRSTQLDAFHREFLLP 325
           E+WQKM+FPSPYLNARRFDAADPKARKRVVAVLHE LSLTMEKR+   QLDAFH E+LLP
Sbjct: 283 EKWQKMEFPSPYLNARRFDAADPKARKRVVAVLHELLSLTMEKRVTCAQLDAFHSEYLLP 342

Query: 326 SKLLLCLLKHQGIFYITNKGARSTVLLKEAYEGSVLSDKCPLLLHFDRFLSLCGRRD 382
           S+L+LCL+KHQGIFYITNKGAR TV LK+AY GS L +KCPLLL  DRF++LCGR++
Sbjct: 343 SRLILCLIKHQGIFYITNKGARGTVFLKDAYAGSNLIEKCPLLLFHDRFVALCGRKE 399

[Close]
BLAST of CmaCh19G003370 vs. TAIR10
Match: AT5G21970.1 (AT5G21970.1 Ubiquitin carboxyl-terminal hydrolase family protein)

HSP 1 Score: 177.9 bits (450), Expect = 1.2e-44
Identity = 115/367 (31.34%), Postives = 187/367 (50.95%), Query Frame = 1 

Query: 21  ESGFLWVLMRHKSSGGMRPKRKIYYRVDELDKVMELQKKPSLILKLINIIQSQKHKFIFL 80
           ES F  V +R  +S      R    RV EL+   E  K  S ++ L+ +++ ++   + +
Sbjct: 32  ESSFRRVWVRFMTSSKRVQDRSREKRVQELEIATEKWKIASKVIFLMEVLKGERDMIMTV 91

Query: 81  RDLE---KEVGFVQKWNFMAVIERYSSIFYVDSGSCRRPYVRLTNKAEKIASEEHKVKSS 140
           R  E   +++   +       I +   +F +        +  LT   E +  E  K+   
Sbjct: 92  RSFEQYRRQINLPKPHKISDFIRKSPKLFELYKDQRGVLWCGLTEGGEDLLDEHDKLLEE 151

Query: 141 MEPILVKNLRKLLMLSVDCRVPLENIEFIASELGLPCDFKTSLIPEYPEFFSVKEV-DGK 200
                 +++ + LM+SVD ++PL+ I     + GLP DF+ + +  +P+ F V ++ DG+
Sbjct: 152 NGDKAAEHVTRCLMMSVDKKLPLDKIVHFRRDFGLPLDFRINWVYNFPQHFKVVKLGDGE 211

Query: 201 AHLHLENWDSSLAISAREEG-FGRARDVSSCENRKRVRISKDGNFSGPFAFKMCFPPGFR 260
            +L L +W+ + AI+  E+   G   D   CE+       K G  S   AF M FPP ++
Sbjct: 212 EYLELVSWNPAWAITELEKKTLGITED---CEH-------KPGMLS--LAFPMKFPPSYK 271

Query: 261 PNMSYLEHLERWQKMDFPSPYLNARRFDAADPKARKRVVAVLHEFLSLTMEKRMRSTQLD 320
               Y   +E +QK  + SPY +AR  +A   +  KR +AV+HE LS T+EKR+ +  L 
Sbjct: 272 KMYRYRGKIEHFQKRSYLSPYADARGLEAGSKEFDKRAIAVMHELLSFTLEKRLVTDHLT 331

Query: 321 AFHREFLLPSKLLLCLLKHQGIFYITNKGARSTVLLKEAYEGSVLSDKCPLLLHFDRFLS 380
            F REF++P KL+   LKH GIFY++ +G R +V L E YEG  L +KCPL+L  ++ L 
Sbjct: 332 HFRREFVMPQKLMRIFLKHCGIFYVSERGKRFSVFLTEGYEGPELIEKCPLILWKEKLLK 386

Query: 381 LCGRRDK 383
             G R +
Sbjct: 392 FTGYRGR 386

[Close]
BLAST of CmaCh19G003370 vs. TAIR10
Match: AT4G01037.1 (AT4G01037.1 Ubiquitin carboxyl-terminal hydrolase family protein)

HSP 1 Score: 171.4 bits (433), Expect = 1.1e-42
Identity = 108/346 (31.21%), Postives = 181/346 (52.31%), Query Frame = 1 

Query: 37  MRPKRKIYYRVDEL--DKVMELQKKPSLILKLINIIQSQKHKFIFLRDLEK---EVGFVQ 96
           + P R    R  EL  D V++  KK  L+L +  I+ SQ  + + LR L K   ++G  +
Sbjct: 69  VEPVRAAVKRRKELTFDSVVQRDKKLKLVLNIRKILVSQPDRMMSLRGLGKYRRDLGLKK 128

Query: 97  KWNFMAVIERYSSIFYVDSGSCRRPYVRLTNKAEKIASEEHKVKSSMEPILVKNLRKLLM 156
           +  F+A++ +Y  +F +          ++T++AE++  +E ++++ +E +LV  LRKL+M
Sbjct: 129 RRRFIALLRKYPGVFEIVEEGAYSLRFKMTSEAERLYLDEMRIRNELEDVLVVKLRKLVM 188

Query: 157 LSVDCRVPLENIEFIASELGLPCDFKTSLIPEYPEFFSVKEVDGKAHLHLENWDSSLAIS 216
           +S+D R+ LE I  + ++LGLP +F+ ++   YP++F V        L L +WD  LA+S
Sbjct: 189 MSIDKRILLEKISHLKTDLGLPLEFRDTICQRYPQYFRVVPTPRGPALELTHWDPELAVS 248

Query: 217 AREEGFGRARDVSSCENRKRVRISKDGNFSGPFAF-KMCFPPGFRPNMSYLEHLERWQKM 276
           A E        +S  +NR R    ++     P  F ++  P G   + S    + +++ M
Sbjct: 249 AAE--------LSEDDNRTRESEERNLIIDRPPKFNRVKLPRGLNLSKSETRKISQFRDM 308

Query: 277 DFPSPYLNARRFDAADPKARKRVVAVLHEFLSLTMEKRMRSTQLDAFHREFLLPSKLLLC 336
            + SPY +     +   +  K    V+HE LSLT EKR     L  F  EF    +L   
Sbjct: 309 QYISPYKDFSHLRSGTLEKEKHACGVIHELLSLTTEKRTLVDHLTHFREEFRFSQQLRGM 368

Query: 337 LLKHQGIFYITNKGARSTVLLKEAYEGSVLSDKCPLLLHFDRFLSL 377
           L++H  +FY++ KG R +V L+EAY  S L DK PL L  ++  +L
Sbjct: 369 LIRHPDLFYVSLKGERDSVFLREAYRNSELIDKDPLTLVKEKMRAL 406

[Close]
BLAST of CmaCh19G003370 vs. TAIR10
Match: AT5G48040.1 (AT5G48040.1 Ubiquitin carboxyl-terminal hydrolase family protein)

HSP 1 Score: 139.8 bits (351), Expect = 3.5e-33
Identity = 101/339 (29.79%), Postives = 164/339 (48.38%), Query Frame = 1 

Query: 49  ELDKVMELQKKPSLILKLINIIQSQKHKFIFLRDL---EKEVGFVQKWNFMAVIERYSSI 108
           ELD V+  +K    +  L+++I +     + +  L     ++G  Q+    A I RY +I
Sbjct: 44  ELDAVVVREKHLRAVCNLVSVISASPDLRLPIFKLLPHRGQLGLPQELKLSAFIRRYPNI 103

Query: 109 F----YVDSGSCRRPYVRLTNKAEKIASEEHKVKSSMEPILVKNLRKLLMLSVDCRVPLE 168
           F    Y DS     P   LT +   +  EE  V    E  ++  L KLLML+ +  + L 
Sbjct: 104 FVEHCYWDSAGTSVPCFGLTRETIDLYYEEVDVSRVNERDVLVRLCKLLMLTCERTLSLH 163

Query: 169 NIEFIASELGLPCDFKTSLIPEYPEFFSV----KEVDGKAHLHLENWDSSLAISAREEGF 228
           +I+ +  +LGLP D++ SLI ++P+ FS+     ++DG   L L +WD  LA+S      
Sbjct: 164 SIDHLRWDLGLPYDYRDSLITKHPDLFSLVKLSSDLDG---LKLIHWDEHLAVS------ 223

Query: 229 GRARDVSSCENRKRVRISKDGNFSGPFAFKMCFPPGFRPNMSYLEHLERWQKMDFPSPYL 288
                        ++++ +D       AF + F  GF      +E L+ WQ++ + SPY+
Sbjct: 224 -------------QMQLREDVGNDERMAFPVKFTRGFGLKRKSIEWLQEWQRLPYTSPYV 283

Query: 289 NARRFDAADPKARKRVVAVLHEFLSLTMEKRMRSTQLDAFHREFLLPSKLLLCLLKHQGI 348
           +A   D     + KR V V HE L LT+ K+     +    + F LP K      +H GI
Sbjct: 284 DASHLDPRTDLSEKRNVGVFHELLHLTIGKKTERKNVSNLRKPFALPQKFTKVFERHPGI 343

Query: 349 FYITNKGARSTVLLKEAYEGSVLSDKCPLLLHFDRFLSL 377
           FYI+ K    TV+L+EAY+   L +K PL+   ++F ++
Sbjct: 344 FYISMKCDTQTVILREAYDRRHLIEKHPLVEVREKFANM 360

[Close]
BLAST of CmaCh19G003370 vs. TAIR10
Match: AT4G33495.1 (AT4G33495.1 Ubiquitin carboxyl-terminal hydrolase family protein)

HSP 1 Score: 137.1 bits (344), Expect = 2.3e-32
Identity = 112/346 (32.37%), Postives = 179/346 (51.73%), Query Frame = 1 

Query: 27  VLMRHKSSGGMRPKRKIYYRVDELDKVMELQKKPSLILKLINIIQSQKHKFI---FLRDL 86
           +L++  S     PK++   R    D  ME++KK   ++K  ++I SQ +  I    L  L
Sbjct: 29  ILVKPFSQSTTIPKKQDRVRDHGYDNYMEVEKKIRKVVKFHSLILSQPNHTIAISLLDTL 88

Query: 87  EKEVGFVQKWNFM-AVIERYSSIFYVDSGSCRRP-YVRLTNKAEKIASEEHKVKSSMEPI 146
            + +G   K +   A + ++  +F +     +R  Y RLT KA      EH+      P 
Sbjct: 89  ARRLGLGFKQHEPGAFLLKFPHVFEIYEHPVQRILYCRLTRKALDQIRHEHEAVLDQIPD 148

Query: 147 LVKNLRKLLMLSVDCRVPLENIEFIASELGLPCDFKTSLIPEYPEFFSVKEVDGK----A 206
            V  LRKL+M+S   R+ LE++    +E GLP DF+ S+I ++P+FF +  +DG+     
Sbjct: 149 AVTRLRKLVMMSNTGRIRLEHVRIARTEFGLPEDFEYSVILKHPQFFRL--IDGEETRDK 208

Query: 207 HLHLENWDSSLAISAREEGFGRARDVSSCENRKRVRISKDGNFSGPFAFKMCFPPGFRPN 266
           ++ +   D +L+I A E    R R++   E R +   ++D  FS    F + FPPGF+  
Sbjct: 209 YIEIVEKDPNLSICAIE----RVREI---EYRTKGIDAEDVRFS----FVVNFPPGFKIG 268

Query: 267 MSYLEHLERWQKMDFPSPYLNARRFD----AADPKARKRVVAVLHEFLSLTMEKRMRSTQ 326
             +   + +WQ++ + SPY +   +D     A  +  KR VA +HE LSLT+EK++   +
Sbjct: 269 KYFRIAVWKWQRLPYWSPYEDISGYDLRSMEAQNRLEKRSVACIHELLSLTVEKKITLER 328

Query: 327 LDAFHREFLLPSKLLLCLLKHQGIFYIT---NKGARSTVLLKEAYE 357
           +  F     LP KL   LL+HQGIFYI+   N G   TV L+E Y+
Sbjct: 329 IAHFRNVMNLPKKLKEFLLQHQGIFYISTRGNYGKLHTVFLREGYK 361

[Close]
BLAST of CmaCh19G003370 vs. NCBI nr
Match: gi|659071667|ref|XP_008461321.1| (PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE 1 [Cucumis melo])

HSP 1 Score: 689.1 bits (1777), Expect = 4.4e-195
Identity = 346/398 (86.93%), Postives = 362/398 (90.95%), Query Frame = 1 

Query: 1   MNGKTMFLRLNR--------GIHVFNHKESGFLWVLMRHKSSGGMRPKRKIYYRVDELDK 60
           MNGK+MFLRLNR          HVF+HK+S FLWVLMRHKSSGGMRPKRKIYYRV ELDK
Sbjct: 1   MNGKSMFLRLNRYPNSYPISETHVFDHKKSAFLWVLMRHKSSGGMRPKRKIYYRVAELDK 60

Query: 61  VMELQKKPSLILKLINIIQSQKHKFIFLRDLEKEVGFVQKWNFMAVIERYSSIFYVDSGS 120
           VM+LQKKPSLILKLINIIQSQKHKFI LRDLEKEVGFVQKWNFMAVIE+YSSIFYV SGS
Sbjct: 61  VMDLQKKPSLILKLINIIQSQKHKFILLRDLEKEVGFVQKWNFMAVIEKYSSIFYVGSGS 120

Query: 121 CR-RPYVRLTNKAEKIASEEHKVKSSMEPILVKNLRKLLMLSVDCRVPLENIEFIASELG 180
            R  PYVRL+NKAE IASEE KVKS+MEPILVKNLRKLLMLSVDCRVPLENIEFIASELG
Sbjct: 121 SRVPPYVRLSNKAEMIASEEDKVKSAMEPILVKNLRKLLMLSVDCRVPLENIEFIASELG 180

Query: 181 LPCDFKTSLIPEYPEFFSVKEVDGKAHLHLENWDSSLAISAREEGFGRARDVSSCENRKR 240
           LPCDFKTSLIP+YPEFFSVKE DGKAHL+LENWDSSLA+ ARE+GFG+ARD+SSC + KR
Sbjct: 181 LPCDFKTSLIPKYPEFFSVKEADGKAHLNLENWDSSLAVCAREDGFGKARDLSSCGSGKR 240

Query: 241 VRISKDGNFSGPFAFKMCFPPGFRPNMSYLEHLERWQKMDFPSPYLNARRFDAADPKARK 300
           VRISKDGNF GPFAFKMCFPPGFRPN SYLEHLERWQKMDFPSPYLNARRFD ADPK RK
Sbjct: 241 VRISKDGNFCGPFAFKMCFPPGFRPNTSYLEHLERWQKMDFPSPYLNARRFDVADPKTRK 300

Query: 301 RVVAVLHEFLSLTMEKRMRSTQLDAFHREFLLPSKLLLCLLKHQGIFYITNKGARSTVLL 360
           RVVAVLHEFLSLTMEKRM STQLDAFHREFLLPSKLLLCL+KHQGIFYITNKGARSTV L
Sbjct: 301 RVVAVLHEFLSLTMEKRMTSTQLDAFHREFLLPSKLLLCLVKHQGIFYITNKGARSTVFL 360

Query: 361 KEAYEGSVLSDKCPLLLHFDRFLSLCGRRDKHCNSPQV 390
           KE YEGS L DKCPLLLH DRFLSLCGRRD  CN+ QV
Sbjct: 361 KEGYEGSTLVDKCPLLLHSDRFLSLCGRRDVSCNTHQV 398

[Close]
BLAST of CmaCh19G003370 vs. NCBI nr
Match: gi|449443632|ref|XP_004139581.1| (PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE 1 [Cucumis sativus])

HSP 1 Score: 686.0 bits (1769), Expect = 3.8e-194
Identity = 347/398 (87.19%), Postives = 361/398 (90.70%), Query Frame = 1 

Query: 1   MNGKTMFLRLNR--------GIHVFNHKESGFLWVLMRHKSSGGMRPKRKIYYRVDELDK 60
           MNGK+MFLRLNR          HVF+HK+S FLWVLMRHKSSGGMRPKRKIYYRV ELDK
Sbjct: 1   MNGKSMFLRLNRYPNSYPISETHVFDHKKSAFLWVLMRHKSSGGMRPKRKIYYRVAELDK 60

Query: 61  VMELQKKPSLILKLINIIQSQKHKFIFLRDLEKEVGFVQKWNFMAVIERYSSIFYVDSGS 120
           VM+LQKKPSLILKLINIIQSQK+KFI LRDLEKEVGFVQKWNFMAVIE+YSSIFYV SGS
Sbjct: 61  VMDLQKKPSLILKLINIIQSQKNKFILLRDLEKEVGFVQKWNFMAVIEKYSSIFYVGSGS 120

Query: 121 CR-RPYVRLTNKAEKIASEEHKVKSSMEPILVKNLRKLLMLSVDCRVPLENIEFIASELG 180
            R  PYVRL+NKAE IASEE KVKS+MEPILVKNLRKLLMLSVDCRVPLENIEFIASELG
Sbjct: 121 SRVPPYVRLSNKAEMIASEEDKVKSAMEPILVKNLRKLLMLSVDCRVPLENIEFIASELG 180

Query: 181 LPCDFKTSLIPEYPEFFSVKEVDGKAHLHLENWDSSLAISAREEGFGRARDVSSCENRKR 240
           LPCDFKTSLIP+YPEFFSVKEVDGKAHLHLENWDSSLAI ARE+ F +ARD+SSC   KR
Sbjct: 181 LPCDFKTSLIPKYPEFFSVKEVDGKAHLHLENWDSSLAICAREDRFAKARDLSSCGYGKR 240

Query: 241 VRISKDGNFSGPFAFKMCFPPGFRPNMSYLEHLERWQKMDFPSPYLNARRFDAADPKARK 300
           VRISKDGNFSGPFAFKMCFP GFRPN SYLEHLERWQKMDFPSPYLNARRFD ADPK RK
Sbjct: 241 VRISKDGNFSGPFAFKMCFPSGFRPNTSYLEHLERWQKMDFPSPYLNARRFDVADPKTRK 300

Query: 301 RVVAVLHEFLSLTMEKRMRSTQLDAFHREFLLPSKLLLCLLKHQGIFYITNKGARSTVLL 360
           RVVAVLHEFLSLTMEKRM STQLDAFHREFLLPSKLLLCL+KHQGIFYITNKGARSTV L
Sbjct: 301 RVVAVLHEFLSLTMEKRMTSTQLDAFHREFLLPSKLLLCLVKHQGIFYITNKGARSTVFL 360

Query: 361 KEAYEGSVLSDKCPLLLHFDRFLSLCGRRDKHCNSPQV 390
           KE YEGS+L DKCPLLLH DRFLSLCGRRD  CNS QV
Sbjct: 361 KEGYEGSILVDKCPLLLHSDRFLSLCGRRDMSCNSHQV 398

[Close]
BLAST of CmaCh19G003370 vs. NCBI nr
Match: gi|595862784|ref|XP_007211465.1| (hypothetical protein PRUPE_ppa007448mg [Prunus persica])

HSP 1 Score: 523.9 bits (1348), Expect = 2.5e-145
Identity = 261/357 (73.11%), Postives = 296/357 (82.91%), Query Frame = 1 

Query: 25  LWVLMRHKSSGGMRPKRKIYYRVDELDKVMELQKKPSLILKLINIIQSQKHKFIFLRDLE 84
           +WV ++HKSSGG RPKRK+Y+RV ELDKVM+ QKKP+LIL+L +IIQSQKH+ + LRDLE
Sbjct: 1   MWVPVKHKSSGGRRPKRKVYHRVHELDKVMDFQKKPALILQLKSIIQSQKHQSLLLRDLE 60

Query: 85  KEVGFVQKWNFMAVIERYSSIFYVDSGSCRRPYVRLTNKAEKIASEEHKVKSSMEPILVK 144
           KEVGFVQKWNFMA IE+Y SIFYV  G+   P+V L  KA+K+A EE + K  MEPILVK
Sbjct: 61  KEVGFVQKWNFMAAIEKYPSIFYVGGGNRTPPFVTLAEKAKKVAREEAEAKDLMEPILVK 120

Query: 145 NLRKLLMLSVDCRVPLENIEFIASELGLPCDFKTSLIPEYPEFFSVKEVDGKAHLHLENW 204
           NLRKLLMLSVDCRVPLENIEFI SELGLP DFK SL+P+YPE FSVKEV+GK HLHLENW
Sbjct: 121 NLRKLLMLSVDCRVPLENIEFIESELGLPNDFKKSLLPKYPEIFSVKEVNGKLHLHLENW 180

Query: 205 DSSLAISAREEGFGRARDVSSCENRKRVRISKDGNFSGPFAFKMCFPPGFRPNMSYLEHL 264
           DSS+A++AREE  G     +      +VRISKDGNF GP AF+M FP GFRPN SYLE L
Sbjct: 181 DSSIAVTAREEQLGGEGISAPSGLGNKVRISKDGNFLGPHAFRMSFPAGFRPNTSYLEQL 240

Query: 265 ERWQKMDFPSPYLNARRFDAADPKARKRVVAVLHEFLSLTMEKRMRSTQLDAFHREFLLP 324
           ERWQKMDFPSPYLNARRFD ADPK RKRVVAVLHE LSLTM+KRM S QLDAFH E+ LP
Sbjct: 241 ERWQKMDFPSPYLNARRFDIADPKVRKRVVAVLHELLSLTMQKRMTSAQLDAFHSEYFLP 300

Query: 325 SKLLLCLLKHQGIFYITNKGARSTVLLKEAYEGSVLSDKCPLLLHFDRFLSLCGRRD 382
           SKLLLCL+KH GIFYITNKGARSTV LKEAY+G  L +KCPLLL  D+F++L GRR+
Sbjct: 301 SKLLLCLIKHPGIFYITNKGARSTVFLKEAYDGLNLINKCPLLLFNDKFVALSGRRE 357

[Close]
BLAST of CmaCh19G003370 vs. NCBI nr
Match: gi|802743301|ref|XP_012087404.1| (PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE 1 [Jatropha curcas])

HSP 1 Score: 521.9 bits (1343), Expect = 9.4e-145
Identity = 267/374 (71.39%), Postives = 314/374 (83.96%), Query Frame = 1 

Query: 20  KESGFLWVLMRHKSSGGMRPKRKIYYRVDELDKVMELQKKPSLILKLINIIQSQKHKFIF 79
           ++S  +WV ++ KSSGG RPK+KIY+RV ELD+VM+LQKKPSLIL L +IIQSQKH+ + 
Sbjct: 27  QKSRAMWVSVKEKSSGGRRPKKKIYHRVHELDRVMDLQKKPSLILHLKSIIQSQKHQCLL 86

Query: 80  LRDLEKEVGFVQKWNFMAVIERYSSIFYVDSGSCRRP-YVRLTNKAEKIASEEHKVKSSM 139
           LRDLEK+VGFVQKWNFMAV+E+Y SIF V  GS R P +V LT KA KIA++EH+ + SM
Sbjct: 87  LRDLEKQVGFVQKWNFMAVLEKYPSIFRVGGGSDRTPPFVTLTEKAIKIANQEHEARESM 146

Query: 140 EPILVKNLRKLLMLSVDCRVPLENIEFIASELGLPCDFKTSLIPEYPEFFSVKEVDGKAH 199
           EPILV+NLRKLLM+SVDCRVPLE IEFI +ELGLP  FK SLIP+YPE+FSVK V+GKA+
Sbjct: 147 EPILVRNLRKLLMMSVDCRVPLEKIEFIGNELGLPQGFKNSLIPKYPEYFSVKNVNGKAY 206

Query: 200 LHLENWDSSLAISAREEGFGRARDVSSCENRKRVRISKDGNFSGPFAFKMCFPPGFRPNM 259
           LHLENWDSSLAI+AREE        +S   +K+VRISKDGNF GPFAF+M FP GFRPN 
Sbjct: 207 LHLENWDSSLAITAREERLSLEGVSASNPPKKKVRISKDGNFLGPFAFRMRFPAGFRPNA 266

Query: 260 SYLEHLERWQKMDFPSPYLNARRFDAADPKARKRVVAVLHEFLSLTMEKRMRSTQLDAFH 319
           SYLE LERWQ+++FPSPYLNARRFDAADPKARKRVVAVLHE LSLT+EKRM S QLDAFH
Sbjct: 267 SYLEELERWQRLEFPSPYLNARRFDAADPKARKRVVAVLHELLSLTIEKRMTSLQLDAFH 326

Query: 320 REFLLPSKLLLCLLKHQGIFYITNKGARSTVLLKEAYEGSVLSDKCPLLLHFDRFLSLCG 379
            E LLPS+LLLCL+K+ GIFYITNKGARSTV LKEAY+GS L DKCPLLL  D+F++L G
Sbjct: 327 SESLLPSRLLLCLVKNPGIFYITNKGARSTVFLKEAYDGSNLIDKCPLLLFNDKFVALSG 386

Query: 380 RRDKH-CNSPQVRF 392
           RR+ + CN  ++RF
Sbjct: 387 RRESNFCN--EMRF 398

[Close]
BLAST of CmaCh19G003370 vs. NCBI nr
Match: gi|643711605|gb|KDP25112.1| (hypothetical protein JCGZ_22647 [Jatropha curcas])

HSP 1 Score: 521.2 bits (1341), Expect = 1.6e-144
Identity = 266/369 (72.09%), Postives = 311/369 (84.28%), Query Frame = 1 

Query: 25  LWVLMRHKSSGGMRPKRKIYYRVDELDKVMELQKKPSLILKLINIIQSQKHKFIFLRDLE 84
           +WV ++ KSSGG RPK+KIY+RV ELD+VM+LQKKPSLIL L +IIQSQKH+ + LRDLE
Sbjct: 1   MWVSVKEKSSGGRRPKKKIYHRVHELDRVMDLQKKPSLILHLKSIIQSQKHQCLLLRDLE 60

Query: 85  KEVGFVQKWNFMAVIERYSSIFYVDSGSCRRP-YVRLTNKAEKIASEEHKVKSSMEPILV 144
           K+VGFVQKWNFMAV+E+Y SIF V  GS R P +V LT KA KIA++EH+ + SMEPILV
Sbjct: 61  KQVGFVQKWNFMAVLEKYPSIFRVGGGSDRTPPFVTLTEKAIKIANQEHEARESMEPILV 120

Query: 145 KNLRKLLMLSVDCRVPLENIEFIASELGLPCDFKTSLIPEYPEFFSVKEVDGKAHLHLEN 204
           +NLRKLLM+SVDCRVPLE IEFI +ELGLP  FK SLIP+YPE+FSVK V+GKA+LHLEN
Sbjct: 121 RNLRKLLMMSVDCRVPLEKIEFIGNELGLPQGFKNSLIPKYPEYFSVKNVNGKAYLHLEN 180

Query: 205 WDSSLAISAREEGFGRARDVSSCENRKRVRISKDGNFSGPFAFKMCFPPGFRPNMSYLEH 264
           WDSSLAI+AREE        +S   +K+VRISKDGNF GPFAF+M FP GFRPN SYLE 
Sbjct: 181 WDSSLAITAREERLSLEGVSASNPPKKKVRISKDGNFLGPFAFRMRFPAGFRPNASYLEE 240

Query: 265 LERWQKMDFPSPYLNARRFDAADPKARKRVVAVLHEFLSLTMEKRMRSTQLDAFHREFLL 324
           LERWQ+++FPSPYLNARRFDAADPKARKRVVAVLHE LSLT+EKRM S QLDAFH E LL
Sbjct: 241 LERWQRLEFPSPYLNARRFDAADPKARKRVVAVLHELLSLTIEKRMTSLQLDAFHSESLL 300

Query: 325 PSKLLLCLLKHQGIFYITNKGARSTVLLKEAYEGSVLSDKCPLLLHFDRFLSLCGRRDKH 384
           PS+LLLCL+K+ GIFYITNKGARSTV LKEAY+GS L DKCPLLL  D+F++L GRR+ +
Sbjct: 301 PSRLLLCLVKNPGIFYITNKGARSTVFLKEAYDGSNLIDKCPLLLFNDKFVALSGRRESN 360

Query: 385 -CNSPQVRF 392
            CN  ++RF
Sbjct: 361 FCN--EMRF 367

The following BLAST results are available for this feature:
BLAST of CmaCh19G003370 vs. Swiss-Prot
Match NameE-valueIdentityDescription
RPD1_ARATH4.1e-3132.37Protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Arabidopsis thaliana GN=RPD1 PE=1 SV=1[more]
BLAST of CmaCh19G003370 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LVT2_CUCSA2.6e-19487.19Uncharacterized protein OS=Cucumis sativus GN=Csa_1G164710 PE=4 SV=1[more]
M5WG21_PRUPE1.7e-14573.11Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa007448mg PE=4 SV=1[more]
A0A067JMI5_JATCU1.1e-14472.09Uncharacterized protein OS=Jatropha curcas GN=JCGZ_22647 PE=4 SV=1[more]
F6HJ48_VITVI1.2e-14169.78Putative uncharacterized protein OS=Vitis vinifera GN=VIT_02s0087g00260 PE=4 SV=... [more]
V4T294_9ROSI2.0e-14171.07Uncharacterized protein OS=Citrus clementina GN=CICLE_v10020719mg PE=4 SV=1[more]
BLAST of CmaCh19G003370 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G79120.12.8e-13968.63 Ubiquitin carboxyl-terminal hydrolase family protein[more]
AT5G21970.11.2e-4431.34 Ubiquitin carboxyl-terminal hydrolase family protein[more]
AT4G01037.11.1e-4231.21 Ubiquitin carboxyl-terminal hydrolase family protein[more]
AT5G48040.13.5e-3329.79 Ubiquitin carboxyl-terminal hydrolase family protein[more]
AT4G33495.12.3e-3232.37 Ubiquitin carboxyl-terminal hydrolase family protein[more]
BLAST of CmaCh19G003370 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659071667|ref|XP_008461321.1|4.4e-19586.93PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE 1 [Cucumis melo][more]
gi|449443632|ref|XP_004139581.1|3.8e-19487.19PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE 1 [Cucumis sativus][more]
gi|595862784|ref|XP_007211465.1|2.5e-14573.11hypothetical protein PRUPE_ppa007448mg [Prunus persica][more]
gi|802743301|ref|XP_012087404.1|9.4e-14571.39PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE 1 [Jatropha curcas][more]
gi|643711605|gb|KDP25112.1|1.6e-14472.09hypothetical protein JCGZ_22647 [Jatropha curcas][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR021099PORR_domain
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008152 metabolic process
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0016787 hydrolase activity
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh19G003370.1CmaCh19G003370.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR021099Plant organelle RNA recognition domainPFAMPF11955PORRcoord: 46..380
score: 6.1E
NoneNo IPR availablePANTHERPTHR31476FAMILY NOT NAMEDcoord: 28..388
score: 1.1E
NoneNo IPR availablePANTHERPTHR31476:SF11UBIQUITIN CARBOXYL-TERMINAL HYDROLASE FAMILY PROTEINcoord: 28..388
score: 1.1E

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmaCh19G003370CmoCh19G003550Cucurbita moschata (Rifu)cmacmoB511
CmaCh19G003370Carg27139Silver-seed gourdcarcmaB0459
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CmaCh19G003370Cucurbita moschata (Rifu)cmacmoB508
CmaCh19G003370Cucurbita moschata (Rifu)cmacmoB510
CmaCh19G003370Cucurbita pepo (Zucchini)cmacpeB522
CmaCh19G003370Watermelon (97103) v2cmawmbB551
CmaCh19G003370Watermelon (97103) v2cmawmbB560
CmaCh19G003370Wax gourdcmawgoB0649