CmaCh19G001950 (gene) Cucurbita maxima (Rimu)

Overview
NameCmaCh19G001950
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu))
DescriptionNAC domain-containing protein, putative
LocationCma_Chr19 : 1304392 .. 1305084 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATTCTCGGAATCACTCTCTTCTGCCGGTGGGCGTGAGATTTAGACCCACTGATCCGCAGCTTCTTCGGTATCTAAACTTCAAGATTCACGGCCTCCCGTATTTCAAAGGTGCAGTCTTGGACGGTGATCTTTATGGAGAAATGGAGCCATGGGAAATCTGGCTACGGTTCGGAGGCATCGCCGGCGAACATCTCTATTTCTTCACCAAACTCAAGAGGTCCACCAATAACTCTGGACGTTTGTCGGCGCATATCAACCGCAAGGTTGGCTTGGCCAACGGTACATGGAGTGGCGAGAACTCGGGCAGTCCAATTTTTGCTACCAAAACCGATAAACAAATAATCGGCTATTGCAAGTGCTTCAGGTTCGTTCTATTGTTTTGATTTCAATTTTCATTAGAATCTTTAACCGTGTTCTTGGAACACTTTAGGTACGAGAATATCCAATTGCCCCAACATCATGGCGAATGGTTTATGCATGAGTATAGCTTGCACCAAGATTCGATACACCAAGTTGTAGACTCGGATTACGTTTTATGTCGACTTAGCAAGCATGGAAGACTTAAAAGAAAATTACCTAAAAATCTTGAGCTGCAGCAACATAGCAAGAAAAGAATAACGGCGCCTCGATCGACCATCGGACAAGACATTATGTCTAACATGACCATCGATCAAGATTTCAATTTATAA

mRNA sequence

ATGGATTCTCGGAATCACTCTCTTCTGCCGGTGGGCGTGAGATTTAGACCCACTGATCCGCAGCTTCTTCGGTATCTAAACTTCAAGATTCACGGCCTCCCGTATTTCAAAGGTGCAGTCTTGGACGGTGATCTTTATGGAGAAATGGAGCCATGGGAAATCTGGCTACGGTTCGGAGGCATCGCCGGCGAACATCTCTATTTCTTCACCAAACTCAAGAGGTCCACCAATAACTCTGGACGTTTGTCGGCGCATATCAACCGCAAGGTTGGCTTGGCCAACGGTACATGGAGTGGCGAGAACTCGGGCAGTCCAATTTTTGCTACCAAAACCGATAAACAAATAATCGGCTATTGCAAGTGCTTCAGGTACGAGAATATCCAATTGCCCCAACATCATGGCGAATGGTTTATGCATGAGTATAGCTTGCACCAAGATTCGATACACCAAGTTGTAGACTCGGATTACGTTTTATGTCGACTTAGCAAGCATGGAAGACTTAAAAGAAAATTACCTAAAAATCTTGAGCTGCAGCAACATAGCAAGAAAAGAATAACGGCGCCTCGATCGACCATCGGACAAGACATTATGTCTAACATGACCATCGATCAAGATTTCAATTTATAA

Coding sequence (CDS)

ATGGATTCTCGGAATCACTCTCTTCTGCCGGTGGGCGTGAGATTTAGACCCACTGATCCGCAGCTTCTTCGGTATCTAAACTTCAAGATTCACGGCCTCCCGTATTTCAAAGGTGCAGTCTTGGACGGTGATCTTTATGGAGAAATGGAGCCATGGGAAATCTGGCTACGGTTCGGAGGCATCGCCGGCGAACATCTCTATTTCTTCACCAAACTCAAGAGGTCCACCAATAACTCTGGACGTTTGTCGGCGCATATCAACCGCAAGGTTGGCTTGGCCAACGGTACATGGAGTGGCGAGAACTCGGGCAGTCCAATTTTTGCTACCAAAACCGATAAACAAATAATCGGCTATTGCAAGTGCTTCAGGTACGAGAATATCCAATTGCCCCAACATCATGGCGAATGGTTTATGCATGAGTATAGCTTGCACCAAGATTCGATACACCAAGTTGTAGACTCGGATTACGTTTTATGTCGACTTAGCAAGCATGGAAGACTTAAAAGAAAATTACCTAAAAATCTTGAGCTGCAGCAACATAGCAAGAAAAGAATAACGGCGCCTCGATCGACCATCGGACAAGACATTATGTCTAACATGACCATCGATCAAGATTTCAATTTATAA

Protein sequence

MDSRNHSLLPVGVRFRPTDPQLLRYLNFKIHGLPYFKGAVLDGDLYGEMEPWEIWLRFGGIAGEHLYFFTKLKRSTNNSGRLSAHINRKVGLANGTWSGENSGSPIFATKTDKQIIGYCKCFRYENIQLPQHHGEWFMHEYSLHQDSIHQVVDSDYVLCRLSKHGRLKRKLPKNLELQQHSKKRITAPRSTIGQDIMSNMTIDQDFNL
Homology
[Close]
BLAST of CmaCh19G001950 vs. Swiss-Prot
Match: NAC25_ARATH (NAC transcription factor 25 OS=Arabidopsis thaliana GN=NAC025 PE=2 SV=1)

HSP 1 Score: 61.6 bits (148), Expect = 1.2e-08
Identity = 60/212 (28.30%), Postives = 86/212 (40.57%), Query Frame = 1 

Query: 6   HSLLPVGVRFRPTDPQL-LRYLNFKIHGLPYFKGAVLDGDLYGEMEPWEIWLRFGGIAGE 65
           H  LP G RF PTD +L + YL  K   +P     + + DLY + +PWE  L      GE
Sbjct: 13  HPHLPPGFRFHPTDEELVVHYLKKKADSVPLPVSIIAEIDLY-KFDPWE--LPSKASFGE 72

Query: 66  H-LYFFTKLKRSTNNSGRLSAHINRKVGLANGTWSGENSGSPIFATKTDKQIIGYCKCFR 125
           H  YFF+   R   N  R     NR     +G W    +  PIF   + K  +G  K   
Sbjct: 73  HEWYFFSPRDRKYPNGVR----PNR--AATSGYWKATGTDKPIFTCNSHK--VGVKKALV 132

Query: 126 YENIQLPQH-HGEWFMHEYSLHQDSIHQVVD--------------SDYVLCRLSKHGRLK 185
           +   + P+    +W MHEY L   ++                    D+VLCR+ K     
Sbjct: 133 FYGGKPPKGIKTDWIMHEYRLTDGNLSTAAKPPDLTTTRKNSLRLDDWVLCRIYK----- 192

Query: 186 RKLPKNLELQQHSKKRITAPRSTIGQDIMSNM 201
                     ++S +R T  R  + +D+M  M
Sbjct: 193 ----------KNSSQRPTMERVLLREDLMEGM 198

[Close]
BLAST of CmaCh19G001950 vs. Swiss-Prot
Match: NAC18_ARATH (NAC domain-containing protein 18 OS=Arabidopsis thaliana GN=NAC018 PE=2 SV=1)

HSP 1 Score: 61.2 bits (147), Expect = 1.5e-08
Identity = 48/168 (28.57%), Postives = 73/168 (43.45%), Query Frame = 1 

Query: 9   LPVGVRFRPTDPQL-LRYLNFKIHGLPYFKGAVLDGDLYGEMEPWEIWLRFGGIAGEHLY 68
           LP G RF PTD +L + YL  K   +P     + D DLY + +PWE+  +      +  Y
Sbjct: 17  LPPGFRFHPTDEELVIHYLKRKADSVPLPVAIIADVDLY-KFDPWELPAK-ASFGEQEWY 76

Query: 69  FFTKLKRSTNNSGRLSAHINRKVGLANGTWSGENSGSPIFAT-KTDKQIIGYCKCFRYEN 128
           FF+   R   N  R     NR     +G W    +  P+ +T     + +G  K   + +
Sbjct: 77  FFSPRDRKYPNGAR----PNR--AATSGYWKATGTDKPVISTGGGGSKKVGVKKALVFYS 136

Query: 129 IQLPQH-HGEWFMHEYSLHQDSIHQVVD----------SDYVLCRLSK 164
            + P+    +W MHEY L  +    + D           D+VLCR+ K
Sbjct: 137 GKPPKGVKSDWIMHEYRLTDNKPTHICDFGNKKNSLRLDDWVLCRIYK 176

[Close]
BLAST of CmaCh19G001950 vs. Swiss-Prot
Match: NAC72_ARATH (NAC domain-containing protein 72 OS=Arabidopsis thaliana GN=NAC072 PE=2 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 9.8e-08
Identity = 64/210 (30.48%), Postives = 93/210 (44.29%), Query Frame = 1 

Query: 9   LPVGVRFRPTDPQLL-RYLNFKIHGLPYFKGAVLDGDLYGEMEPWEIWLRFGGIAGE-HL 68
           LP G RF PTD +LL +YL  K+ G  +    + D DLY + +PW+  L    + GE   
Sbjct: 14  LPPGFRFYPTDEELLVQYLCRKVAGYHFSLQVIGDIDLY-KFDPWD--LPSKALFGEKEW 73

Query: 69  YFFTKLKRSTNNSGRLSAHINRKVGLANGTWSGENSGSPIFATKTDKQIIGYCKCFRYEN 128
           YFF+   R   N  R     NR  G  +G W    +   I A   D + +G  K   +  
Sbjct: 74  YFFSPRDRKYPNGSR----PNRVAG--SGYWKATGTDKIITA---DGRRVGIKKALVFYA 133

Query: 129 IQLPQ-HHGEWFMHEYSL--HQDSIHQVVDSDYVLCRLSKH---GRLKRKLPKNLELQQH 188
            + P+     W MHEY L  H  S       D+VLCR+ K     + +   P     ++H
Sbjct: 134 GKAPKGTKTNWIMHEYRLIEHSRSHGSSKLDDWVLCRIYKKTSGSQRQAVTPVQACREEH 193

Query: 189 SKKRITAPRSTIGQDIMSNM--TIDQDFNL 209
           S    ++  S+   D++ +     DQ FNL
Sbjct: 194 STNGSSSSSSSQLDDVLDSFPEIKDQSFNL 211

[Close]
BLAST of CmaCh19G001950 vs. Swiss-Prot
Match: NC101_ARATH (NAC domain-containing protein 101 OS=Arabidopsis thaliana GN=NAC101 PE=2 SV=1)

HSP 1 Score: 57.4 bits (137), Expect = 2.2e-07
Identity = 49/167 (29.34%), Postives = 73/167 (43.71%), Query Frame = 1 

Query: 1   MDSRNHSLLPVGVRFRPTDPQLL-RYLNFKIHGLPYFKGAVLDGDLYGEMEPWEIWLRFG 60
           M+S  H  +P G RF PTD +L+  YL  K+         + D DLY ++EPW+I    G
Sbjct: 1   MESLAH--IPPGYRFHPTDEELVDYYLKNKVAFPGMQVDVIKDVDLY-KIEPWDIQELCG 60

Query: 61  GIAGE--HLYFFTKLKRSTNNSGRLSAHINRKVGLANGTWSGENSGSPIFATKTDKQIIG 120
              GE    YFF+   +      R     NR  G  +G W        I+   + ++++G
Sbjct: 61  RGTGEEREWYFFSHKDKKYPTGTR----TNRATG--SGFWKATGRDKAIY---SKQELVG 120

Query: 121 YCKCFRYENIQLPQ-HHGEWFMHEYSLHQDSIHQVVDSDYVLCRLSK 164
             K   +   + P     +W MHEY L  D      +  +V+CR  K
Sbjct: 121 MRKTLVFYKGRAPNGQKSDWIMHEYRLETDENGPPHEEGWVVCRAFK 155

[Close]
BLAST of CmaCh19G001950 vs. Swiss-Prot
Match: NAC10_ORYSI (NAC transcription factor ONAC010 OS=Oryza sativa subsp. indica GN=ONAC010 PE=3 SV=1)

HSP 1 Score: 56.6 bits (135), Expect = 3.7e-07
Identity = 42/141 (29.79%), Postives = 63/141 (44.68%), Query Frame = 1 

Query: 9   LPVGVRFRPTDPQL-LRYLNFKIHGLPYFKGAVLDGDLYGEMEPWEIWLRFGGIAGEHLY 68
           LP G RF PTD +L + YL  K   +P     + + DLY + +PWE+  +      +  Y
Sbjct: 29  LPPGFRFHPTDEELVVHYLKKKAASVPLPVTIIAEVDLY-KFDPWELPEK-ANFGEQEWY 88

Query: 69  FFTKLKRSTNNSGRLSAHINRKVGLANGTWSGENSGSPIFATKTDKQIIGYCKCFRYENI 128
           FF+   R   N  R     NR     +G W    +  PI A+ + ++ +G  K   +   
Sbjct: 89  FFSPRDRKYPNGAR----PNR--AATSGYWKATGTDKPIMASGSTREKVGVKKALVFYRG 148

Query: 129 QLPQH-HGEWFMHEYSLHQDS 148
           + P+     W MHEY L   S
Sbjct: 149 KPPKGVKTNWIMHEYRLTDTS 161

[Close]
BLAST of CmaCh19G001950 vs. TrEMBL
Match: A0A0A0LFJ5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G838730 PE=4 SV=1)

HSP 1 Score: 250.4 bits (638), Expect = 2.0e-63
Identity = 124/194 (63.92%), Postives = 147/194 (75.77%), Query Frame = 1 

Query: 1   MDSRNHSL-LP----VGVRFRPTDPQLLRYLNFKIHGLPYFKGAVLDGDLYGEMEPWEIW 60
           MDS + SL LP    VGV+FRPTD QLL YL+ KI+G PYF+GAV D DLYG +EPWEIW
Sbjct: 1   MDSSSGSLPLPLNHYVGVKFRPTDQQLLHYLHCKIYGQPYFQGAVFDFDLYGGVEPWEIW 60

Query: 61  LRFGGIAGEHLYFFTKLKRSTNNSGRLSAHINRKVGLANGTWSGENSGSPIFATKTDKQI 120
             FGGI GE LYFFTKLKRST NSG LS HINRK+GL NGTWSGENS SPI+  + D+QI
Sbjct: 61  QSFGGIDGEDLYFFTKLKRSTTNSGNLSTHINRKIGLVNGTWSGENSASPIYVNEDDQQI 120

Query: 121 IGYCKCFRYENIQLPQHHGEWFMHEYSLHQDSIHQVVDSDYVLCRLSKHGRLKRKLPKNL 180
           IGY K FRYEN    +HHGEW MHEY+LH + + + VD +YVLCR+ ++ R +RKL    
Sbjct: 121 IGYRKRFRYENESSEEHHGEWIMHEYNLHPNYLCEGVDPNYVLCRIRRNERARRKLEIQG 180

Query: 181 ELQQHSKKRITAPR 190
           EL+Q +KKRI AP+
Sbjct: 181 ELKQPNKKRIKAPK 194

[Close]
BLAST of CmaCh19G001950 vs. TrEMBL
Match: A0A0A0KXM1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G296900 PE=4 SV=1)

HSP 1 Score: 246.9 bits (629), Expect = 2.2e-62
Identity = 119/176 (67.61%), Postives = 136/176 (77.27%), Query Frame = 1 

Query: 11  VGVRFRPTDPQLLRYLNFKIHGLPYFKGAVLDGDLYGEMEPWEIWLRFGGIAGEHLYFFT 70
           VGV+FRPTD QLL YL+ KI+G PYF+GAV D DLYG +EPWEIW  FGGI GE LYFFT
Sbjct: 16  VGVKFRPTDQQLLHYLHCKIYGQPYFQGAVFDFDLYGGVEPWEIWQSFGGIDGEDLYFFT 75

Query: 71  KLKRSTNNSGRLSAHINRKVGLANGTWSGENSGSPIFATKTDKQIIGYCKCFRYENIQLP 130
           KLKRST NSG LS HINRK+GL NGTWSGENS SPI+  K  +QIIGY K FRYEN  L 
Sbjct: 76  KLKRSTTNSGNLSTHINRKIGLVNGTWSGENSASPIYVNKDHEQIIGYRKRFRYENESLE 135

Query: 131 QHHGEWFMHEYSLHQDSIH-QVVDSDYVLCRLSKHGRLKRKLPKNLELQQHSKKRI 186
           +HHGEW MHEYSLH D +  + VD +YVLCR+ K+ R KRKL    EL+Q +KKR+
Sbjct: 136 EHHGEWIMHEYSLHPDYLRCEGVDPNYVLCRIRKNQRAKRKLETESELKQSNKKRM 191

[Close]
BLAST of CmaCh19G001950 vs. TrEMBL
Match: A0A0A0M0I5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G652300 PE=4 SV=1)

HSP 1 Score: 240.0 bits (611), Expect = 2.6e-60
Identity = 119/196 (60.71%), Postives = 144/196 (73.47%), Query Frame = 1 

Query: 11  VGVRFRPTDPQLLRYLNFKIHGLPYFKGAVLDGDLYGEMEPWEIWLRFGGIAGEHLYFFT 70
           VG++FRPTD QLL YL+ KI+G PYF+GAV D DLYG +EPWEIW  FGGI GE LYFFT
Sbjct: 46  VGLKFRPTDQQLLHYLHCKIYGQPYFQGAVFDFDLYGGVEPWEIWQSFGGIDGEDLYFFT 105

Query: 71  KLKRSTNNSGRLSAHINRKVGLANGTWSGENSGSPIFATKTDKQIIGYCKCFRYENIQLP 130
           KLKRST N G LS H+NRK+GL NGTWSGENS SPI+  +  ++IIGY K FRYEN  L 
Sbjct: 106 KLKRSTTNCGNLSTHVNRKIGLVNGTWSGENSASPIYVNENCEEIIGYRKRFRYENESLE 165

Query: 131 QHHGEWFMHEYSLHQDSIH-QVVDSDYVLCRLSKHGRLKRKLPK-NLELQQHSKKRITAP 190
           +HHGEW MHEYS+HQ  +  + VDS+YVLCR+ K+ R+KRKL +   E +Q +KKRI AP
Sbjct: 166 EHHGEWIMHEYSMHQRYLRCEGVDSNYVLCRMRKNERVKRKLLEIQGEAKQPNKKRIKAP 225

Query: 191 RSTIGQDIMSNMTIDQ 205
             +  +       IDQ
Sbjct: 226 HISDNERCDELQPIDQ 241

[Close]
BLAST of CmaCh19G001950 vs. TrEMBL
Match: M5WZ67_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa025596mg PE=4 SV=1)

HSP 1 Score: 127.9 bits (320), Expect = 1.5e-26
Identity = 78/190 (41.05%), Postives = 108/190 (56.84%), Query Frame = 1 

Query: 9   LPVGVRFRPTDPQLLRY-LNFKIHGLPY-FKGAVLDGDLYGEMEPWEIWLRFGG---IAG 68
           LPVG +FRP D QLL Y L  K+ G  + +   + + DLYG++EPW+IW  +GG      
Sbjct: 10  LPVGFKFRPRDDQLLGYYLLNKVRGTSFMYDNVIPEMDLYGKIEPWDIWHEYGGRNLAKS 69

Query: 69  EHLYFFTKLKRSTNNSGRLSAHINRKVGLANGTWSGENSGSPIFATKTDKQIIGYCKCFR 128
           E LYFFTKLK  ++   R++    R +G  +GTW GENSG+P+   K ++  +G  K F 
Sbjct: 70  EDLYFFTKLKSLSDKDSRVA----RTIG--SGTWKGENSGTPVSDPKNEENDLGIWKRFH 129

Query: 129 YENIQLPQHHGEWFMHEYSLHQDSIHQVVDS--DYVLCRLSKHGRLKRKLPKNLELQQHS 188
           YEN +  Q  G W MHEYSLH   +    +S   +VLCR+ K+ + KRKL    E  +  
Sbjct: 130 YENPKSVQ-DGCWIMHEYSLHPSLVKPKPNSTDQFVLCRIRKNDKGKRKLRTAEEDNETD 189

Query: 189 KKRITAPRST 192
             RI    +T
Sbjct: 190 NPRIVRKYAT 192

[Close]
BLAST of CmaCh19G001950 vs. TrEMBL
Match: A0A0U3J8Z8_PRUPE (NAC68 OS=Prunus persica PE=2 SV=1)

HSP 1 Score: 127.9 bits (320), Expect = 1.5e-26
Identity = 74/170 (43.53%), Postives = 102/170 (60.00%), Query Frame = 1 

Query: 9   LPVGVRFRPTDPQLLRY-LNFKIHGLPY-FKGAVLDGDLYGEMEPWEIWLRFGG---IAG 68
           LPVG +FRP D QLL Y L  K+ G  + +   + + DLYG++EPW+IW  +GG      
Sbjct: 10  LPVGFKFRPRDDQLLGYYLLNKVRGTSFMYDNVIPEMDLYGKIEPWDIWHEYGGRNLAKS 69

Query: 69  EHLYFFTKLKRSTNNSGRLSAHINRKVGLANGTWSGENSGSPIFATKTDKQIIGYCKCFR 128
           E LYFFTKLK  ++   R++    R +G  +GTW GENSG+P+   K ++  +G  K F 
Sbjct: 70  EDLYFFTKLKSLSDKDSRVA----RTIG--SGTWKGENSGTPVSDPKNEENDLGIWKRFH 129

Query: 129 YENIQLPQHHGEWFMHEYSLHQDSIHQVVDS--DYVLCRLSKHGRLKRKL 172
           YEN +  Q  G W MHEYSLH   +    +S   +VLCR+ K+ + KRKL
Sbjct: 130 YENPKSVQ-DGCWIMHEYSLHPSLVKPKPNSTNQFVLCRIRKNDKGKRKL 172

[Close]
BLAST of CmaCh19G001950 vs. TAIR10
Match: AT2G24430.1 (AT2G24430.1 NAC domain containing protein 38)

HSP 1 Score: 63.5 bits (153), Expect = 1.7e-10
Identity = 52/172 (30.23%), Postives = 76/172 (44.19%), Query Frame = 1 

Query: 4   RNHSLLPVGVRFRPTDPQLLR-YLNFKIHGLPYFKGAVLDGDLYGEMEPWEIWLRFGGIA 63
           +    LP G RF PTD +L+  YL  KI    +   A+ D DL  + EPWE+  +   + 
Sbjct: 11  KEEEALPPGFRFHPTDEELISYYLVNKIADQNFTGKAIADVDL-NKSEPWELPEK-AKMG 70

Query: 64  GEHLYFFTKLKRSTNNSGRLSAHINRKVGLANGTWSGENSGSPIFATKTDKQIIGYCKCF 123
           G+  YFF+   R      R +   N       G W        IF   T  +++G  K  
Sbjct: 71  GKEWYFFSLRDRKYPTGVRTNRATN------TGYWKTTGKDKEIF-NSTTSELVGMKKTL 130

Query: 124 RYENIQLPQHHGE---WFMHEYSLHQDSIHQVVDSD-YVLCRLSKHGRLKRK 171
            +   + P+  GE   W MHEY LH  S ++    D +V+CR+ K     +K
Sbjct: 131 VFYRGRAPR--GEKTCWVMHEYRLHSKSSYRTSKQDEWVVCRVFKKTEATKK 171

[Close]
BLAST of CmaCh19G001950 vs. TAIR10
Match: AT1G61110.1 (AT1G61110.1 NAC domain containing protein 25)

HSP 1 Score: 61.6 bits (148), Expect = 6.5e-10
Identity = 60/212 (28.30%), Postives = 86/212 (40.57%), Query Frame = 1 

Query: 6   HSLLPVGVRFRPTDPQL-LRYLNFKIHGLPYFKGAVLDGDLYGEMEPWEIWLRFGGIAGE 65
           H  LP G RF PTD +L + YL  K   +P     + + DLY + +PWE  L      GE
Sbjct: 13  HPHLPPGFRFHPTDEELVVHYLKKKADSVPLPVSIIAEIDLY-KFDPWE--LPSKASFGE 72

Query: 66  H-LYFFTKLKRSTNNSGRLSAHINRKVGLANGTWSGENSGSPIFATKTDKQIIGYCKCFR 125
           H  YFF+   R   N  R     NR     +G W    +  PIF   + K  +G  K   
Sbjct: 73  HEWYFFSPRDRKYPNGVR----PNR--AATSGYWKATGTDKPIFTCNSHK--VGVKKALV 132

Query: 126 YENIQLPQH-HGEWFMHEYSLHQDSIHQVVD--------------SDYVLCRLSKHGRLK 185
           +   + P+    +W MHEY L   ++                    D+VLCR+ K     
Sbjct: 133 FYGGKPPKGIKTDWIMHEYRLTDGNLSTAAKPPDLTTTRKNSLRLDDWVLCRIYK----- 192

Query: 186 RKLPKNLELQQHSKKRITAPRSTIGQDIMSNM 201
                     ++S +R T  R  + +D+M  M
Sbjct: 193 ----------KNSSQRPTMERVLLREDLMEGM 198

[Close]
BLAST of CmaCh19G001950 vs. TAIR10
Match: AT1G52880.1 (AT1G52880.1 NAC (No Apical Meristem) domain transcriptional regulator superfamily protein)

HSP 1 Score: 61.2 bits (147), Expect = 8.5e-10
Identity = 48/168 (28.57%), Postives = 73/168 (43.45%), Query Frame = 1 

Query: 9   LPVGVRFRPTDPQL-LRYLNFKIHGLPYFKGAVLDGDLYGEMEPWEIWLRFGGIAGEHLY 68
           LP G RF PTD +L + YL  K   +P     + D DLY + +PWE+  +      +  Y
Sbjct: 17  LPPGFRFHPTDEELVIHYLKRKADSVPLPVAIIADVDLY-KFDPWELPAK-ASFGEQEWY 76

Query: 69  FFTKLKRSTNNSGRLSAHINRKVGLANGTWSGENSGSPIFAT-KTDKQIIGYCKCFRYEN 128
           FF+   R   N  R     NR     +G W    +  P+ +T     + +G  K   + +
Sbjct: 77  FFSPRDRKYPNGAR----PNR--AATSGYWKATGTDKPVISTGGGGSKKVGVKKALVFYS 136

Query: 129 IQLPQH-HGEWFMHEYSLHQDSIHQVVD----------SDYVLCRLSK 164
            + P+    +W MHEY L  +    + D           D+VLCR+ K
Sbjct: 137 GKPPKGVKSDWIMHEYRLTDNKPTHICDFGNKKNSLRLDDWVLCRIYK 176

[Close]
BLAST of CmaCh19G001950 vs. TAIR10
Match: AT5G62380.1 (AT5G62380.1 NAC-domain protein 101)

HSP 1 Score: 57.4 bits (137), Expect = 1.2e-08
Identity = 49/167 (29.34%), Postives = 73/167 (43.71%), Query Frame = 1 

Query: 1   MDSRNHSLLPVGVRFRPTDPQLL-RYLNFKIHGLPYFKGAVLDGDLYGEMEPWEIWLRFG 60
           M+S  H  +P G RF PTD +L+  YL  K+         + D DLY ++EPW+I    G
Sbjct: 1   MESLAH--IPPGYRFHPTDEELVDYYLKNKVAFPGMQVDVIKDVDLY-KIEPWDIQELCG 60

Query: 61  GIAGE--HLYFFTKLKRSTNNSGRLSAHINRKVGLANGTWSGENSGSPIFATKTDKQIIG 120
              GE    YFF+   +      R     NR  G  +G W        I+   + ++++G
Sbjct: 61  RGTGEEREWYFFSHKDKKYPTGTR----TNRATG--SGFWKATGRDKAIY---SKQELVG 120

Query: 121 YCKCFRYENIQLPQ-HHGEWFMHEYSLHQDSIHQVVDSDYVLCRLSK 164
             K   +   + P     +W MHEY L  D      +  +V+CR  K
Sbjct: 121 MRKTLVFYKGRAPNGQKSDWIMHEYRLETDENGPPHEEGWVVCRAFK 155

[Close]
BLAST of CmaCh19G001950 vs. TAIR10
Match: AT5G46590.1 (AT5G46590.1 NAC domain containing protein 96)

HSP 1 Score: 57.4 bits (137), Expect = 1.2e-08
Identity = 59/197 (29.95%), Postives = 78/197 (39.59%), Query Frame = 1 

Query: 7   SLLPVGVRFRPTDPQLLR-YLNFKIHGLPYFKGAVLDGDLYGEMEPWEIWLR-FGGIAGE 66
           S LP G RF PTD +L+  YL  K+ GL      +   DLY   +PWE+  + F      
Sbjct: 4   SCLPPGFRFHPTDEELIEYYLKRKVEGLEIELEVIPVIDLY-SFDPWELPDKSFLPNRDM 63

Query: 67  HLYFFTKLKRSTNNSGRLSAHINRKVGLANGTWSGENSGSPIFATKTDKQIIGYCKCFRY 126
             YFF    +   N  R     NR  G   G W        I  T     IIGY K   +
Sbjct: 64  EWYFFCSRDKKYPNGFR----TNR--GTKAGYWKATGKDRKI--TSRSSSIIGYRKTLVF 123

Query: 127 ENIQLP-QHHGEWFMHEYSLHQDSI---HQVVDSDYVLCRLSKHGRLK-----RKLPKNL 186
              + P      W MHEY L  D      Q +   +VLCR++    +K     RK+P   
Sbjct: 124 YKGRAPLGDRSNWIMHEYRLCDDDTSQGSQNLKGAFVLCRVAMKNEIKTNTKIRKIPSEQ 183

Query: 187 EL----QQHSKKRITAP 189
            +          R+T+P
Sbjct: 184 TIGSGESSGLSSRVTSP 191

[Close]
BLAST of CmaCh19G001950 vs. NCBI nr
Match: gi|778688961|ref|XP_011652873.1| (PREDICTED: NAC domain-containing protein 102-like [Cucumis sativus])

HSP 1 Score: 250.4 bits (638), Expect = 2.8e-63
Identity = 124/194 (63.92%), Postives = 147/194 (75.77%), Query Frame = 1 

Query: 1   MDSRNHSL-LP----VGVRFRPTDPQLLRYLNFKIHGLPYFKGAVLDGDLYGEMEPWEIW 60
           MDS + SL LP    VGV+FRPTD QLL YL+ KI+G PYF+GAV D DLYG +EPWEIW
Sbjct: 1   MDSSSGSLPLPLNHYVGVKFRPTDQQLLHYLHCKIYGQPYFQGAVFDFDLYGGVEPWEIW 60

Query: 61  LRFGGIAGEHLYFFTKLKRSTNNSGRLSAHINRKVGLANGTWSGENSGSPIFATKTDKQI 120
             FGGI GE LYFFTKLKRST NSG LS HINRK+GL NGTWSGENS SPI+  + D+QI
Sbjct: 61  QSFGGIDGEDLYFFTKLKRSTTNSGNLSTHINRKIGLVNGTWSGENSASPIYVNEDDQQI 120

Query: 121 IGYCKCFRYENIQLPQHHGEWFMHEYSLHQDSIHQVVDSDYVLCRLSKHGRLKRKLPKNL 180
           IGY K FRYEN    +HHGEW MHEY+LH + + + VD +YVLCR+ ++ R +RKL    
Sbjct: 121 IGYRKRFRYENESSEEHHGEWIMHEYNLHPNYLCEGVDPNYVLCRIRRNERARRKLEIQG 180

Query: 181 ELQQHSKKRITAPR 190
           EL+Q +KKRI AP+
Sbjct: 181 ELKQPNKKRIKAPK 194

[Close]
BLAST of CmaCh19G001950 vs. NCBI nr
Match: gi|659085698|ref|XP_008443554.1| (PREDICTED: protein SOMBRERO-like [Cucumis melo])

HSP 1 Score: 250.4 bits (638), Expect = 2.8e-63
Identity = 133/210 (63.33%), Postives = 151/210 (71.90%), Query Frame = 1 

Query: 11  VGVRFRPTDPQLLRYLNFKIHGLPYFKGAVLDGDLYGEMEPWEIWLRFGGIAGEHLYFFT 70
           VGV+FRPTD QLLRYL  KI+  PYF+GAV D DLYG +EPWEIW  F GI GE LYFFT
Sbjct: 16  VGVKFRPTDQQLLRYLCCKIYDQPYFQGAVFDFDLYGGIEPWEIWQSFKGIDGEDLYFFT 75

Query: 71  KLKRSTNNSGRLSAHINRKVGLANGTWSGENSGSPIFATKTD-KQIIGYCKCFRYENIQL 130
           KLKRST NSG LS HINRK+G ANGTWSGENS +PI+A + D +QIIGY K FRYEN QL
Sbjct: 76  KLKRSTTNSGNLSTHINRKIGSANGTWSGENSATPIYANEDDHEQIIGYRKRFRYENDQL 135

Query: 131 PQHHGEWFMHEYSLHQDSIH-QVVDSDYVLCRLSKHGRLKRKLPKNLELQQHSKKRITAP 190
            +HHGEW MHEYSLHQD +  Q VD +YVLCR+ K+ R KRKL    EL+Q +KKRI AP
Sbjct: 136 QEHHGEWIMHEYSLHQDHLKCQGVDPNYVLCRIRKNERAKRKLKVQRELKQPNKKRIMAP 195

Query: 191 ------------RSTI-GQDIMSNMTIDQD 206
                       R TI   +IM +MT  QD
Sbjct: 196 DQLQPINHGVITRETIYNSNIMHDMTTHQD 225

[Close]
BLAST of CmaCh19G001950 vs. NCBI nr
Match: gi|659131362|ref|XP_008465646.1| (PREDICTED: NAC domain-containing protein 72-like [Cucumis melo])

HSP 1 Score: 247.7 bits (631), Expect = 1.8e-62
Identity = 122/180 (67.78%), Postives = 143/180 (79.44%), Query Frame = 1 

Query: 11  VGVRFRPTDPQLLRYLNFKIHGLPYFKGAVLDGDLYGEMEPWEIWLRFGGIAGEHLYFFT 70
           VGV+FRPTD QLL YL  KI+G PYF+GA+ D DLYG  EPWEIW  F GI GE LYFFT
Sbjct: 16  VGVKFRPTDQQLLHYLYCKINGQPYFQGAIFDFDLYGGTEPWEIWQSFKGIDGEDLYFFT 75

Query: 71  KLKRSTNNSGRLSAHINRKVGLANGTWSGENSGSPIFATKTDKQIIGYCKCFRYENIQLP 130
           KLKRST N G+LSAHI+RK+GLANGTWSGENS +PIFA + D+QIIGY K FRYEN Q+ 
Sbjct: 76  KLKRSTKNCGQLSAHISRKIGLANGTWSGENSATPIFANEDDEQIIGYRKRFRYENDQVE 135

Query: 131 QHHGEWFMHEYSLHQDSI-HQVVDSDYVLCRLSKHGRLKRKLPKNLELQQHSKKRITAPR 190
           +HHGEW MHEY LHQ  + +Q VD +YVLCR+ K+ R KRKL +  ELQQ +KKR+TAP+
Sbjct: 136 EHHGEWIMHEYRLHQSYLAYQDVDHNYVLCRIRKNERAKRKL-EIRELQQPNKKRMTAPK 194

[Close]
BLAST of CmaCh19G001950 vs. NCBI nr
Match: gi|449448878|ref|XP_004142192.1| (PREDICTED: NAC transcription factor 29-like [Cucumis sativus])

HSP 1 Score: 246.9 bits (629), Expect = 3.1e-62
Identity = 119/176 (67.61%), Postives = 136/176 (77.27%), Query Frame = 1 

Query: 11  VGVRFRPTDPQLLRYLNFKIHGLPYFKGAVLDGDLYGEMEPWEIWLRFGGIAGEHLYFFT 70
           VGV+FRPTD QLL YL+ KI+G PYF+GAV D DLYG +EPWEIW  FGGI GE LYFFT
Sbjct: 16  VGVKFRPTDQQLLHYLHCKIYGQPYFQGAVFDFDLYGGVEPWEIWQSFGGIDGEDLYFFT 75

Query: 71  KLKRSTNNSGRLSAHINRKVGLANGTWSGENSGSPIFATKTDKQIIGYCKCFRYENIQLP 130
           KLKRST NSG LS HINRK+GL NGTWSGENS SPI+  K  +QIIGY K FRYEN  L 
Sbjct: 76  KLKRSTTNSGNLSTHINRKIGLVNGTWSGENSASPIYVNKDHEQIIGYRKRFRYENESLE 135

Query: 131 QHHGEWFMHEYSLHQDSIH-QVVDSDYVLCRLSKHGRLKRKLPKNLELQQHSKKRI 186
           +HHGEW MHEYSLH D +  + VD +YVLCR+ K+ R KRKL    EL+Q +KKR+
Sbjct: 136 EHHGEWIMHEYSLHPDYLRCEGVDPNYVLCRIRKNQRAKRKLETESELKQSNKKRM 191

[Close]
BLAST of CmaCh19G001950 vs. NCBI nr
Match: gi|700211551|gb|KGN66647.1| (hypothetical protein Csa_1G652300 [Cucumis sativus])

HSP 1 Score: 240.0 bits (611), Expect = 3.8e-60
Identity = 119/196 (60.71%), Postives = 144/196 (73.47%), Query Frame = 1 

Query: 11  VGVRFRPTDPQLLRYLNFKIHGLPYFKGAVLDGDLYGEMEPWEIWLRFGGIAGEHLYFFT 70
           VG++FRPTD QLL YL+ KI+G PYF+GAV D DLYG +EPWEIW  FGGI GE LYFFT
Sbjct: 46  VGLKFRPTDQQLLHYLHCKIYGQPYFQGAVFDFDLYGGVEPWEIWQSFGGIDGEDLYFFT 105

Query: 71  KLKRSTNNSGRLSAHINRKVGLANGTWSGENSGSPIFATKTDKQIIGYCKCFRYENIQLP 130
           KLKRST N G LS H+NRK+GL NGTWSGENS SPI+  +  ++IIGY K FRYEN  L 
Sbjct: 106 KLKRSTTNCGNLSTHVNRKIGLVNGTWSGENSASPIYVNENCEEIIGYRKRFRYENESLE 165

Query: 131 QHHGEWFMHEYSLHQDSIH-QVVDSDYVLCRLSKHGRLKRKLPK-NLELQQHSKKRITAP 190
           +HHGEW MHEYS+HQ  +  + VDS+YVLCR+ K+ R+KRKL +   E +Q +KKRI AP
Sbjct: 166 EHHGEWIMHEYSMHQRYLRCEGVDSNYVLCRMRKNERVKRKLLEIQGEAKQPNKKRIKAP 225

Query: 191 RSTIGQDIMSNMTIDQ 205
             +  +       IDQ
Sbjct: 226 HISDNERCDELQPIDQ 241

The following BLAST results are available for this feature:
BLAST of CmaCh19G001950 vs. Swiss-Prot
Match NameE-valueIdentityDescription
NAC25_ARATH1.2e-0828.30NAC transcription factor 25 OS=Arabidopsis thaliana GN=NAC025 PE=2 SV=1[more]
NAC18_ARATH1.5e-0828.57NAC domain-containing protein 18 OS=Arabidopsis thaliana GN=NAC018 PE=2 SV=1[more]
NAC72_ARATH9.8e-0830.48NAC domain-containing protein 72 OS=Arabidopsis thaliana GN=NAC072 PE=2 SV=1[more]
NC101_ARATH2.2e-0729.34NAC domain-containing protein 101 OS=Arabidopsis thaliana GN=NAC101 PE=2 SV=1[more]
NAC10_ORYSI3.7e-0729.79NAC transcription factor ONAC010 OS=Oryza sativa subsp. indica GN=ONAC010 PE=3 S... [more]
BLAST of CmaCh19G001950 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LFJ5_CUCSA2.0e-6363.92Uncharacterized protein OS=Cucumis sativus GN=Csa_3G838730 PE=4 SV=1[more]
A0A0A0KXM1_CUCSA2.2e-6267.61Uncharacterized protein OS=Cucumis sativus GN=Csa_4G296900 PE=4 SV=1[more]
A0A0A0M0I5_CUCSA2.6e-6060.71Uncharacterized protein OS=Cucumis sativus GN=Csa_1G652300 PE=4 SV=1[more]
M5WZ67_PRUPE1.5e-2641.05Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa025596mg PE=4 SV=1[more]
A0A0U3J8Z8_PRUPE1.5e-2643.53NAC68 OS=Prunus persica PE=2 SV=1[more]
BLAST of CmaCh19G001950 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G24430.11.7e-1030.23 NAC domain containing protein 38[more]
AT1G61110.16.5e-1028.30 NAC domain containing protein 25[more]
AT1G52880.18.5e-1028.57 NAC (No Apical Meristem) domain transcriptional regulator superfamil... [more]
AT5G62380.11.2e-0829.34 NAC-domain protein 101[more]
AT5G46590.11.2e-0829.95 NAC domain containing protein 96[more]
BLAST of CmaCh19G001950 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|778688961|ref|XP_011652873.1|2.8e-6363.92PREDICTED: NAC domain-containing protein 102-like [Cucumis sativus][more]
gi|659085698|ref|XP_008443554.1|2.8e-6363.33PREDICTED: protein SOMBRERO-like [Cucumis melo][more]
gi|659131362|ref|XP_008465646.1|1.8e-6267.78PREDICTED: NAC domain-containing protein 72-like [Cucumis melo][more]
gi|449448878|ref|XP_004142192.1|3.1e-6267.61PREDICTED: NAC transcription factor 29-like [Cucumis sativus][more]
gi|700211551|gb|KGN66647.1|3.8e-6060.71hypothetical protein Csa_1G652300 [Cucumis sativus][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR003441NAC-dom
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006355 regulation of transcription, DNA-templated
cellular_component GO:0005575 cellular_component
molecular_function GO:0003677 DNA binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh19G001950.1CmaCh19G001950.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003441NAC domainPFAMPF02365NAMcoord: 10..143
score: 4.8
IPR003441NAC domainPROFILEPS51005NACcoord: 9..164
score: 21
IPR003441NAC domainunknownSSF101941NAC domaincoord: 4..162
score: 4.84
NoneNo IPR availablePANTHERPTHR31719FAMILY NOT NAMEDcoord: 9..161
score: 3.2
NoneNo IPR availablePANTHERPTHR31719:SF10SUBFAMILY NOT NAMEDcoord: 9..161
score: 3.2

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CmaCh19G001950Cucurbita maxima (Rimu)cmacmaB450
CmaCh19G001950Cucumber (Gy14) v1cgycmaB0413
CmaCh19G001950Cucurbita moschata (Rifu)cmacmoB508
CmaCh19G001950Cucurbita moschata (Rifu)cmacmoB523
CmaCh19G001950Wild cucumber (PI 183967)cmacpiB516
CmaCh19G001950Cucumber (Chinese Long) v2cmacuB509
CmaCh19G001950Melon (DHL92) v3.5.1cmameB467
CmaCh19G001950Watermelon (Charleston Gray)cmawcgB441
CmaCh19G001950Watermelon (Charleston Gray)cmawcgB470
CmaCh19G001950Watermelon (97103) v1cmawmB471
CmaCh19G001950Watermelon (97103) v1cmawmB490
CmaCh19G001950Cucurbita pepo (Zucchini)cmacpeB522
CmaCh19G001950Cucurbita pepo (Zucchini)cmacpeB543
CmaCh19G001950Bottle gourd (USVL1VR-Ls)cmalsiB463
CmaCh19G001950Cucumber (Gy14) v2cgybcmaB375
CmaCh19G001950Melon (DHL92) v3.6.1cmamedB542
CmaCh19G001950Silver-seed gourdcarcmaB1082
CmaCh19G001950Cucumber (Chinese Long) v3cmacucB0614
CmaCh19G001950Watermelon (97103) v2cmawmbB543
CmaCh19G001950Watermelon (97103) v2cmawmbB548
CmaCh19G001950Wax gourdcmawgoB0653