CmaCh19G001890 (gene) Cucurbita maxima (Rimu)
The following sequences are available for this feature:
Legend: CDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGATTCTCATGATTGCCCTCTCTTGCCCGTGGGAGTGAGATTCAAGCCTACTGATCCGCAACTTCTTCAATATCTACACTGGAAAATTCATGGCCAACCATATTTCAAACGTGCAGTCTTGGACTGTGATCTTTATGGAGAAATGGAGCCATGGGAAATCTGGCTACGGTTCGGAGGCATCGACGGCGAACATCTCTATTTCTTCACCAAACTCAAGAGGTCCACCAATAACTCTGGACGTTTGTCGGCGCATATCAACCGCAAGGTTGGCTTGGCCAACGGTACATGGAGTGGCGAGAACTCAGCCAGTCCAATTTTTGCTACCAAAACCGATAATACAATAATCGGCTATTGCAAACGCTTTAGGTTCGTTTTGTCATTTTGATTTCAATTTTTGATAGATTCTTTAACCTTATGTTTGTGTCCTTTGAACATTTTAGGTACGAAAATGTCCAATTGCCCGAGCGTCATGGCGAATGGATTATGCATGAATATAGCTTGCATCAAGATTCGATACAACAAGCTGTAGATTTAGATTATGTTTTATGCCGATTCAAAAAGAATGAAAGACTTAAAAGAAAATTACAAAAAGATCTCGAGGAGCAGCAACATAGCAAGAGAAGAATGACCACCTGAATTCTTTCATAGTGGAAGTCGTGCACTACAACTAACACTTCAGATGATCCAACCGATTTTAGAATATTAAATATTTGAATTTTATTAGATTTTAGTTATTTATGTAATATTTGAGGAAGATAGATATTTTTTTTAAAATAATTAATAAAATAGAGATTTCGGTTGTAAAATCCAAAATATTAACTAACCTCTCTAATTTCAAAAGCCTTAAAATTCTCTTATAATATTTTCCCTTCAAAATTTTATGATAAAATAATAATAATAATAATATTAATATAATTAAAAAAATAGAAAATCAATAATTTATATATCCTTATTCATTAATATATTATTACTAAATAATTAAACATTTAATTTAATCTAAAGTACAAAAAAATAAATTAAAGACATTATTCTTTTTTTTTTTAAAGTTAAAAAATGTAAGGATATTTTTATTAATTTAGTTTTTTTTTTTTTAAAATTTATAATTTAGCCCTATTTAAAACAAAAATATAAAATGGAGGGAAATGGGGTGCACGCGCCAAGAATACTACTAGCTCGATTAGGAGAGGCGAATGAGACGACGGTAGGGCAGCCGAACACCGGCGCTGAGATCGGCGGAAACTCATGCAAATTCTTCTCAGTTCAGAACCTCAAAGCCTTTCCAGTTTCGTAAACGACGGTTCATCTTCAGGTGTCTTGGGAGTCCATGATTGTTGCTGTCTCGACCTTCATTTCCATTATCCGCTCCCCCGAGCCCCTCACATGATTCTGACTCTAGAGTTTCTGTTCTGA ATGGATTCTCATGATTGCCCTCTCTTGCCCGTGGGAGTGAGATTCAAGCCTACTGATCCGCAACTTCTTCAATATCTACACTGGAAAATTCATGGCCAACCATATTTCAAACGTGCAGTCTTGGACTGTGATCTTTATGGAGAAATGGAGCCATGGGAAATCTGGCTACGGTTCGGAGGCATCGACGGCGAACATCTCTATTTCTTCACCAAACTCAAGAGGTCCACCAATAACTCTGGACGTTTGTCGGCGCATATCAACCGCAAGGTTGGCTTGGCCAACGGTACATGGAGTGGCGAGAACTCAGCCAGTCCAATTTTTGCTACCAAAACCGATAATACAATAATCGGCTATTGCAAACGCTTTAGTTCAGAACCTCAAAGCCTTTCCAGTTTCGTAAACGACGGTTCATCTTCAGGTGTCTTGGGAGTCCATGATTGTTGCTGTCTCGACCTTCATTTCCATTATCCGCTCCCCCGAGCCCCTCACATGATTCTGACTCTAGAGTTTCTGTTCTGA ATGGATTCTCATGATTGCCCTCTCTTGCCCGTGGGAGTGAGATTCAAGCCTACTGATCCGCAACTTCTTCAATATCTACACTGGAAAATTCATGGCCAACCATATTTCAAACGTGCAGTCTTGGACTGTGATCTTTATGGAGAAATGGAGCCATGGGAAATCTGGCTACGGTTCGGAGGCATCGACGGCGAACATCTCTATTTCTTCACCAAACTCAAGAGGTCCACCAATAACTCTGGACGTTTGTCGGCGCATATCAACCGCAAGGTTGGCTTGGCCAACGGTACATGGAGTGGCGAGAACTCAGCCAGTCCAATTTTTGCTACCAAAACCGATAATACAATAATCGGCTATTGCAAACGCTTTAGTTCAGAACCTCAAAGCCTTTCCAGTTTCGTAAACGACGGTTCATCTTCAGGTGTCTTGGGAGTCCATGATTGTTGCTGTCTCGACCTTCATTTCCATTATCCGCTCCCCCGAGCCCCTCACATGATTCTGACTCTAGAGTTTCTGTTCTGA MDSHDCPLLPVGVRFKPTDPQLLQYLHWKIHGQPYFKRAVLDCDLYGEMEPWEIWLRFGGIDGEHLYFFTKLKRSTNNSGRLSAHINRKVGLANGTWSGENSASPIFATKTDNTIIGYCKRFSSEPQSLSSFVNDGSSSGVLGVHDCCCLDLHFHYPLPRAPHMILTLEFLF
BLAST of CmaCh19G001890 vs. TrEMBL
Match: A0A0A0KXM1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G296900 PE=4 SV=1) HSP 1 Score: 186.8 bits (473), Expect = 2.2e-44 Identity = 87/119 (73.11%), Postives = 95/119 (79.83%), Query Frame = 1
BLAST of CmaCh19G001890 vs. TrEMBL
Match: A0A0A0LFJ5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G838730 PE=4 SV=1) HSP 1 Score: 186.0 bits (471), Expect = 3.8e-44 Identity = 86/118 (72.88%), Postives = 95/118 (80.51%), Query Frame = 1
BLAST of CmaCh19G001890 vs. TrEMBL
Match: A0A0A0M0I5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G652300 PE=4 SV=1) HSP 1 Score: 181.4 bits (459), Expect = 9.2e-43 Identity = 83/119 (69.75%), Postives = 94/119 (78.99%), Query Frame = 1
BLAST of CmaCh19G001890 vs. TrEMBL
Match: A0A0U3J8Z8_PRUPE (NAC68 OS=Prunus persica PE=2 SV=1) HSP 1 Score: 94.4 bits (233), Expect = 1.5e-16 Identity = 53/127 (41.73%), Postives = 76/127 (59.84%), Query Frame = 1
BLAST of CmaCh19G001890 vs. TrEMBL
Match: M5X6G9_PRUPE (NAC68 OS=Prunus persica GN=PRUPE_ppa023804mg PE=2 SV=1) HSP 1 Score: 94.4 bits (233), Expect = 1.5e-16 Identity = 53/127 (41.73%), Postives = 76/127 (59.84%), Query Frame = 1
BLAST of CmaCh19G001890 vs. NCBI nr
Match: gi|449448878|ref|XP_004142192.1| (PREDICTED: NAC transcription factor 29-like [Cucumis sativus]) HSP 1 Score: 186.8 bits (473), Expect = 3.2e-44 Identity = 87/119 (73.11%), Postives = 95/119 (79.83%), Query Frame = 1
BLAST of CmaCh19G001890 vs. NCBI nr
Match: gi|778688961|ref|XP_011652873.1| (PREDICTED: NAC domain-containing protein 102-like [Cucumis sativus]) HSP 1 Score: 186.0 bits (471), Expect = 5.4e-44 Identity = 86/118 (72.88%), Postives = 95/118 (80.51%), Query Frame = 1
BLAST of CmaCh19G001890 vs. NCBI nr
Match: gi|449442783|ref|XP_004139160.1| (PREDICTED: NAC domain-containing protein 66-like [Cucumis sativus]) HSP 1 Score: 181.4 bits (459), Expect = 1.3e-42 Identity = 83/119 (69.75%), Postives = 94/119 (78.99%), Query Frame = 1
BLAST of CmaCh19G001890 vs. NCBI nr
Match: gi|700211551|gb|KGN66647.1| (hypothetical protein Csa_1G652300 [Cucumis sativus]) HSP 1 Score: 181.4 bits (459), Expect = 1.3e-42 Identity = 83/119 (69.75%), Postives = 94/119 (78.99%), Query Frame = 1
BLAST of CmaCh19G001890 vs. NCBI nr
Match: gi|659131362|ref|XP_008465646.1| (PREDICTED: NAC domain-containing protein 72-like [Cucumis melo]) HSP 1 Score: 178.7 bits (452), Expect = 8.6e-42 Identity = 83/115 (72.17%), Postives = 94/115 (81.74%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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