CmaCh19G000340 (gene) Cucurbita maxima (Rimu)

NameCmaCh19G000340
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu))
DescriptionSpindle pole body-associated CIK1
LocationCma_Chr19 : 186711 .. 190644 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TGATGGGGTATGGCTCAGCCGGTGCATCGAATTTTGTGGGCCACGAAGTTTATCCTTTGCTAAGCTTACTGGAACTCCCCAATTCGGCAGCTCAGCTCCATGCCGCCATAATTAGCAGACTACTTGGAAGTGGCCGCCATACAAAACCCAAATCTATGGGAACTGTTTCTCTATTCCTCGCAACGTCCCTACGATCGCACCATTTTCCTTCAACACAAACCCTTCTTTCTAACTTCGCAGCTTCGTCGCAAGTCGTTTCGTTTACTCCCAAATGCACTAGATTCCGCCGGAAAAGCGTGGTTTTCGGTAAGCAATCAAGCAACGAGGATGAATCTCAGTTTCTAGATGAAAATGGTGCCGTCAATGATATGGATGGATATTTGAATTACCACTCTTTCGAATATGACTCCGTTTGGGATACAAAGCCTTCTTGGTTAGCTATCTTATCCTGTTTTTTCATCGTTGATTTTGAGCAACTATCTAAAATTTGCTGTGATCTCTGTTTCTTTGAACTTTTAGGCTATCTAGAATTAGGTTTTCAGAGAAACCCTATATTAGGATTTTTGAATTAGTGCTAGCCAATCGATGAATTATGAATTTTTTCAACTCGGATTCTGGATATAACATGGTGGGTCAGGTACATTTGGAGTTCTAGTTGAAGAAGTCGAATGACCAATTGTGAATTGATTACTTAACTGGAATTATGCTGTTCTTCTTTAAACATATCACTTATTGCTTACTGTTTCTATCCACAAGCATGTGCTGATATAGTTTATGGCGTTGGTGTTCATCTCTTCATAATCTGGTCATAATTGGCATGTTTCTGTAGAGAATCCTCCTGATAGGCAAAATAACATGTTAATCTACAAGATTCTCTGTTCATAATTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATATTGATATATGAGCAAGAAATATTATCTCCATTGGTACAAGGCCTTTTGGGGAAACAAAAAATAAAGCCACGAGAACTTATGCTCAAAGTGGACAATATCATACTATTGTAGAAGGTTGTGATTCATAACATGGTATCAAGAGTCATGCTCTTAACTTAGTCATGTTAATAAAATCCTCAAATGTTGAACAAAGAACTTGTGAGCCTCGAAGGTGTGGTCAAAAGTGACTCAAGTGTGGAACAAAGAGTGTACTTTGTTGAGGGCTCTAGAGAAGGAGTTGAGCCTCAATTAAGAGGAGGTTGTTCGAGGGCTCCATAGGCCTCAGGAGGAGGCTCTATGGTGAGCTTTGTTCGAGGGGAGGATTGTTGAGGATTGTCAGGAGAGGAGTCCCATATTGACTAATTAAGGGAAAAATCATGGATTTATAAGTAAGAAATACTATCTCCACTAGTAAGAGGCCTTCTGGGGAAACCAAAAACAAAACCATGAGAGCGTCCCCAAAACAAAGCCATGAGAGCTTAGGCTCAAAGTGGACAATATCATACTATTGGAGAGGGTTGTGGTTCCTAACCTTCTCTTCTTTATAAGAATTAAAAGGAAATGCCATTTCTTCCATGATCGACTTCATTAGATAAGCTTTTTGTATTGTATCCAATCATATAGTATTCCAATGTATCAAAAAGCAACTGAACTGATAGAAAGAAAGTAAATGCATCAATGCTAAACAGGCAACTGGGGCTCACTTTGTGAGCAGAAATTTCTACAATAGTGATCCATATACCTGTTTGAACACATTCTTAGGGAGCATCTTTAAATAATTGCTTTTCCTTGGCCTACCTCATTGAATCTGCTAAATCCTTCCTTGTCCTACCTCATTGAATCTGCTAAATCCAGGCTTTGGCTGTTTGGCTGTCTGGATTGATGGGATGAGAAATGGGGTACTCATACTTGTTGAGGATGGTTGGGAGGGAGTCCCACATTAGCGAATTAAGGGAATGATCATGGGTTTATAAGTACGGAATGTTATCTCCATTGGACTGAGGACTTTTGGGGAAATCAAAAGCAAAGCCACGAGAGCTTATGCTCAAAGTAGATAAAATCATACCATTGTGGAGATTTGTGGTTCCTAACATGGTACCAAAGTCATGCCCTTAACTTAGTCATGTCAATAGAATCCTCAAGTGTCGAACAAAGAAGTTGCTAGCCTTGAAGGTGTAGTCAAAAGTGACTCAAGTGCCGAATAAAGGGTGTACTTTGTTTGAGGGCTCCAGAGAAAGGAGTCGAGCCTCAATTAAGGGGAGATTGTTCGAGGGCCACATAGACCTTAGGGGAGGCTCTATGGTGTACTTTGTTCTAGGGGAGGATTGTTGAGGATTGTTGGGAGGGAGTCCCGCATTAACTAATTAAGGGAATGATCATGGGTTTATAAGTAAGGAATATATCTCCATTGGTATGAGGCATTTTGGGAAACAAAAAACAAAATCATGAGAGCATATGCTCCAAGTGACAATATCATACCATCATGAAGGTTTGTTGTAACAGTCCAAGCCCACCTCTAACAGATATTGTCCACTTTGACCCGTTACGTATCGCCGTCAGCCTCATAGTTTTAAACCACGTCTATTAGCGAGAGGTTTTCACACCCTTATAAGAAATGATTCGTTCTCTTCTCCAACCGATGTGGGATCTTGCATTCATGGTTCCTAACAATACTTTCTCACAAGTGTCATTAAAGTTGCTAGTTGTTGTATGACATGCTTTTCTCTTACCTCTGATTTTGATGTTTTTTCTTTCTATCATTTTGTCACAAGGTGTCAACCATGGACTATAACACTGACAGGATCACTAGTAATTGCCTCTAGCTGGTTACTTATAAAGTCGATAGCAGTGACCGCAGTAGTACTCGCATTGATATGCACATGGTGGTACATCTTTCTTTACTCATACCCAAAGGTTTGTGTATCAAATCATCCACCCCCACCTCTCTTTGGTTAATATTGCATATCATATGAATTGAAGATCTTAAACAACTTAAAAAAGGCTGATAATAGGTGGATTTCTGATAGCATTAGGAAGGAGTAAGAGGAAGAAAGAAGGTGTTTGAGATGAGAAACATGTGTGCATTTGCAGGCTTATTCTGATATGATTGCGGAGAGAAGAAGAAAGGTTAGTGATGGAGTCGAAGACACATTTGGAGTGAAAAGGACACAGTGATTACCGACTGCTTCTCTTCTTCTACGAGGCTTTTGCTGACTTCTCTGTGCTTTGTGCTCTATGATCTATAAAGAACTGTAAACGCAGGTGGTATGAGAAACATATAGCTAAGCGAACCAAGTGTTTCTTCTTGAGACTCTTAAACCAATGCATAGTTTTTTTAAATTCTGTGATTTTAGATACTATTTTGGTTTTGATTCATTTTCGTTCGCAGACTTTCAAAGTATTCGTTTTAGTCCTTTTACATTTATAAAGTGACTGTTATGATCTCTGATTGCCAACTTTTCCATAC

mRNA sequence

TGATGGGGTATGGCTCAGCCGGTGCATCGAATTTTGTGGGCCACGAAGTTTATCCTTTGCTAAGCTTACTGGAACTCCCCAATTCGGCAGCTCAGCTCCATGCCGCCATAATTAGCAGACTACTTGGAAGTGGCCGCCATACAAAACCCAAATCTATGGGAACTGTTTCTCTATTCCTCGCAACGTCCCTACGATCGCACCATTTTCCTTCAACACAAACCCTTCTTTCTAACTTCGCAGCTTCGTCGCAAGTCGTTTCGTTTACTCCCAAATGCACTAGATTCCGCCGGAAAAGCGTGGTTTTCGGTAAGCAATCAAGCAACGAGGATGAATCTCAGTTTCTAGATGAAAATGGTGCCGTCAATGATATGGATGGATATTTGAATTACCACTCTTTCGAATATGACTCCGTTTGGGATACAAAGCCTTCTTGGTGTCAACCATGGACTATAACACTGACAGGATCACTAGTAATTGCCTCTAGCTGGTTACTTATAAAGTCGATAGCAGTGACCGCAGTAGTACTCGCATTGATATGCACATGGTGGTACATCTTTCTTTACTCATACCCAAAGGCTTATTCTGATATGATTGCGGAGAGAAGAAGAAAGGTTAGTGATGGAGTCGAAGACACATTTGGAGTGAAAAGGACACAGTGATTACCGACTGCTTCTCTTCTTCTACGAGGCTTTTGCTGACTTCTCTGTGCTTTGTGCTCTATGATCTATAAAGAACTGTAAACGCAGGTGGTATGAGAAACATATAGCTAAGCGAACCAAGTGTTTCTTCTTGAGACTCTTAAACCAATGCATAGTTTTTTTAAATTCTGTGATTTTAGATACTATTTTGGTTTTGATTCATTTTCGTTCGCAGACTTTCAAAGTATTCGTTTTAGTCCTTTTACATTTATAAAGTGACTGTTATGATCTCTGATTGCCAACTTTTCCATAC

Coding sequence (CDS)

ATGGGGTATGGCTCAGCCGGTGCATCGAATTTTGTGGGCCACGAAGTTTATCCTTTGCTAAGCTTACTGGAACTCCCCAATTCGGCAGCTCAGCTCCATGCCGCCATAATTAGCAGACTACTTGGAAGTGGCCGCCATACAAAACCCAAATCTATGGGAACTGTTTCTCTATTCCTCGCAACGTCCCTACGATCGCACCATTTTCCTTCAACACAAACCCTTCTTTCTAACTTCGCAGCTTCGTCGCAAGTCGTTTCGTTTACTCCCAAATGCACTAGATTCCGCCGGAAAAGCGTGGTTTTCGGTAAGCAATCAAGCAACGAGGATGAATCTCAGTTTCTAGATGAAAATGGTGCCGTCAATGATATGGATGGATATTTGAATTACCACTCTTTCGAATATGACTCCGTTTGGGATACAAAGCCTTCTTGGTGTCAACCATGGACTATAACACTGACAGGATCACTAGTAATTGCCTCTAGCTGGTTACTTATAAAGTCGATAGCAGTGACCGCAGTAGTACTCGCATTGATATGCACATGGTGGTACATCTTTCTTTACTCATACCCAAAGGCTTATTCTGATATGATTGCGGAGAGAAGAAGAAAGGTTAGTGATGGAGTCGAAGACACATTTGGAGTGAAAAGGACACAGTGA

Protein sequence

MGYGSAGASNFVGHEVYPLLSLLELPNSAAQLHAAIISRLLGSGRHTKPKSMGTVSLFLATSLRSHHFPSTQTLLSNFAASSQVVSFTPKCTRFRRKSVVFGKQSSNEDESQFLDENGAVNDMDGYLNYHSFEYDSVWDTKPSWCQPWTITLTGSLVIASSWLLIKSIAVTAVVLALICTWWYIFLYSYPKAYSDMIAERRRKVSDGVEDTFGVKRTQ
BLAST of CmaCh19G000340 vs. TrEMBL
Match: A0A0A0KED9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G410630 PE=4 SV=1)

HSP 1 Score: 284.3 bits (726), Expect = 1.3e-73
Identity = 140/168 (83.33%), Postives = 155/168 (92.26%), Query Frame = 1

Query: 52  MGTVSLFLATSLRSHHFPS-TQTLLSNFAASSQVVSFTPKCTRFRRKSVVFGKQSSNEDE 111
           MG VS FLA+SLR + FPS TQTLLSNFAASSQ++SFTP CT+FR K++VFGKQS N+++
Sbjct: 1   MGAVSPFLASSLRPYRFPSSTQTLLSNFAASSQLLSFTPNCTKFRSKTLVFGKQSGNDND 60

Query: 112 SQFLDENGAVNDMDGYLNYHSFEYDSVWDTKPSWCQPWTITLTGSLVIASSWLLIKSIAV 171
           SQFLDENG VNDMDGYLNYHSFEYDSVWDTKP+WCQPWTITLTG LVIASSW+ IKSIAV
Sbjct: 61  SQFLDENGVVNDMDGYLNYHSFEYDSVWDTKPAWCQPWTITLTGLLVIASSWVAIKSIAV 120

Query: 172 TAVVLALICTWWYIFLYSYPKAYSDMIAERRRKVSDGVEDTFGVKRTQ 219
           TAV+L LIC WWYIFLYSYPKAYS+MIAERRRKVSDG+EDTFGVKRTQ
Sbjct: 121 TAVILTLICLWWYIFLYSYPKAYSEMIAERRRKVSDGLEDTFGVKRTQ 168

BLAST of CmaCh19G000340 vs. TrEMBL
Match: B9H895_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0005s23230g PE=4 SV=1)

HSP 1 Score: 210.3 bits (534), Expect = 2.4e-51
Identity = 104/157 (66.24%), Postives = 127/157 (80.89%), Query Frame = 1

Query: 63  LRSHHFPSTQTLLSNFAASSQVVSFTPKCTRFRRKSVVFGKQSSN-EDESQFLDENGAVN 122
           LRS+ + S++T LS   +   +   T +  RFR K+VVFG  SS+  +ESQFLDENGAV+
Sbjct: 18  LRSNQYSSSRTHLSKPISYPHISLITSRSNRFRGKTVVFGGNSSDIPNESQFLDENGAVD 77

Query: 123 DMDGYLNYHSFEYDSVWDTKPSWCQPWTITLTGSLVIASSWLLIKSIAVTAVVLALICTW 182
           DMDGYLNY S EYDSVWDTKPSWCQPWTITLTG LVIA SWL++ S+ VT +VL LICTW
Sbjct: 78  DMDGYLNYLSLEYDSVWDTKPSWCQPWTITLTGVLVIAGSWLILHSVVVTTIVLLLICTW 137

Query: 183 WYIFLYSYPKAYSDMIAERRRKVSDGVEDTFGVKRTQ 219
           WYIFLYSYPK Y+DMIAERR++V++GVEDTFG+ ++Q
Sbjct: 138 WYIFLYSYPKVYADMIAERRKRVTNGVEDTFGMTKSQ 174

BLAST of CmaCh19G000340 vs. TrEMBL
Match: B9S406_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0557330 PE=4 SV=1)

HSP 1 Score: 194.1 bits (492), Expect = 1.7e-46
Identity = 100/173 (57.80%), Postives = 126/173 (72.83%), Query Frame = 1

Query: 52  MGTVSLFLATS------LRSHHFPSTQTLLSNFAASSQVVSFTPKCTRFRRKSVVFGKQS 111
           MGT+SL    S      +R  +  S++T L   ++   + S+T    + R K+VVFG  S
Sbjct: 1   MGTLSLLFPMSYSFSSPVRLKNDSSSRTHLRKRSSWPNISSYTLNSAKIRGKTVVFGGNS 60

Query: 112 SNEDESQFLDENGAVNDMDGYLNYHSFEYDSVWDTKPSWCQPWTITLTGSLVIASSWLLI 171
           S+ +ESQFLDENG V+DMDGYLNY S EYDSVWDTKPSWCQPWTI +TG   IA SWL+ 
Sbjct: 61  SDPNESQFLDENGVVDDMDGYLNYLSLEYDSVWDTKPSWCQPWTIAVTGVSGIACSWLIF 120

Query: 172 KSIAVTAVVLALICTWWYIFLYSYPKAYSDMIAERRRKVSDGVEDTFGVKRTQ 219
            S+ VT+VVL L+C+WWYIFLYSYPKAY++MIAERR+KV+ G EDT+G K+ Q
Sbjct: 121 HSVVVTSVVLFLVCSWWYIFLYSYPKAYAEMIAERRKKVTSGSEDTYGWKKIQ 173

BLAST of CmaCh19G000340 vs. TrEMBL
Match: A0A067FMV2_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g030472mg PE=4 SV=1)

HSP 1 Score: 193.7 bits (491), Expect = 2.3e-46
Identity = 100/171 (58.48%), Postives = 124/171 (72.51%), Query Frame = 1

Query: 54  TVSLFLATSLRSHHFPSTQTLLSN------FAASSQVVSFTPKCTRFRRKSVVFGKQSSN 113
           +VS+  +  +RSH   S +T  SN      F+ SS   S   K  +  RK+VVFG  S +
Sbjct: 10  SVSVCCSLRMRSHDSSSQKTHFSNSILRPHFSCSS---SRELKTVKLGRKTVVFGANSGD 69

Query: 114 EDESQFLDENGAVNDMDGYLNYHSFEYDSVWDTKPSWCQPWTITLTGSLVIASSWLLIKS 173
           +++S F+DENG V+DMDGYLNY S EYDSVWDTKPSWCQPWTI LTG+LVI  SWL+  S
Sbjct: 70  QNKSMFMDENGVVDDMDGYLNYLSLEYDSVWDTKPSWCQPWTIVLTGALVIVCSWLIFHS 129

Query: 174 IAVTAVVLALICTWWYIFLYSYPKAYSDMIAERRRKVSDGVEDTFGVKRTQ 219
           +  + VV  L+CTWWYIFLYSYPKAY+DMIAERR+KV +G EDTFG+ R+Q
Sbjct: 130 LLASTVVSLLVCTWWYIFLYSYPKAYTDMIAERRKKVRNGTEDTFGLDRSQ 177

BLAST of CmaCh19G000340 vs. TrEMBL
Match: V4VVI3_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10022514mg PE=4 SV=1)

HSP 1 Score: 193.7 bits (491), Expect = 2.3e-46
Identity = 100/171 (58.48%), Postives = 124/171 (72.51%), Query Frame = 1

Query: 54  TVSLFLATSLRSHHFPSTQTLLSN------FAASSQVVSFTPKCTRFRRKSVVFGKQSSN 113
           +VS+  +  +RSH   S +T  SN      F+ SS   S   K  +  RK+VVFG  S +
Sbjct: 10  SVSVCCSLRMRSHDSSSQKTHFSNSILRPHFSCSS---SRELKTVKLGRKTVVFGANSGD 69

Query: 114 EDESQFLDENGAVNDMDGYLNYHSFEYDSVWDTKPSWCQPWTITLTGSLVIASSWLLIKS 173
           +++S F+DENG V+DMDGYLNY S EYDSVWDTKPSWCQPWTI LTG+LVI  SWL+  S
Sbjct: 70  QNKSMFMDENGVVDDMDGYLNYLSLEYDSVWDTKPSWCQPWTIVLTGALVIVCSWLIFHS 129

Query: 174 IAVTAVVLALICTWWYIFLYSYPKAYSDMIAERRRKVSDGVEDTFGVKRTQ 219
           +  + VV  L+CTWWYIFLYSYPKAY+DMIAERR+KV +G EDTFG+ R+Q
Sbjct: 130 LLASTVVSLLVCTWWYIFLYSYPKAYTDMIAERRKKVRNGTEDTFGLDRSQ 177

BLAST of CmaCh19G000340 vs. TAIR10
Match: AT4G02725.1 (AT4G02725.1 unknown protein)

HSP 1 Score: 158.7 bits (400), Expect = 4.1e-39
Identity = 81/163 (49.69%), Postives = 109/163 (66.87%), Query Frame = 1

Query: 51  SMGTVSLFLATSLRSHHFPSTQTLLSNFAASSQVVSFTPKCTRFRRKSVVFGKQSSNEDE 110
           SM  VSL       S   P T+ LLS  +  + + SF  K  R   K   FG       +
Sbjct: 5   SMSAVSL-------SPFRPQTENLLSKLSFRTNLHSFNLKPIRISTKVRSFGGNRREPKD 64

Query: 111 SQFLDENGAVNDMDGYLNYHSFEYDSVWDTKPSWCQPWTITLTGSLVIASSWLLIKSIAV 170
           S+F+DE G V+DM+G+L+  S EYDSVWDTKPSWCQPWTI LTG  ++A SW+++ S+ V
Sbjct: 65  SRFVDEKGVVDDMEGFLDNLSLEYDSVWDTKPSWCQPWTIMLTGLSIVACSWVILHSVIV 124

Query: 171 TAVVLALICTWWYIFLYSYPKAYSDMIAERRRKVSDGVEDTFG 214
           +++ + +I  WWYIFLYSYPK+YS+MIAERR++V+DG ED +G
Sbjct: 125 SSLAVGVIGAWWYIFLYSYPKSYSEMIAERRKRVADGFEDIYG 160

BLAST of CmaCh19G000340 vs. NCBI nr
Match: gi|449444669|ref|XP_004140096.1| (PREDICTED: uncharacterized protein LOC101202761 [Cucumis sativus])

HSP 1 Score: 284.3 bits (726), Expect = 1.8e-73
Identity = 140/168 (83.33%), Postives = 155/168 (92.26%), Query Frame = 1

Query: 52  MGTVSLFLATSLRSHHFPS-TQTLLSNFAASSQVVSFTPKCTRFRRKSVVFGKQSSNEDE 111
           MG VS FLA+SLR + FPS TQTLLSNFAASSQ++SFTP CT+FR K++VFGKQS N+++
Sbjct: 1   MGAVSPFLASSLRPYRFPSSTQTLLSNFAASSQLLSFTPNCTKFRSKTLVFGKQSGNDND 60

Query: 112 SQFLDENGAVNDMDGYLNYHSFEYDSVWDTKPSWCQPWTITLTGSLVIASSWLLIKSIAV 171
           SQFLDENG VNDMDGYLNYHSFEYDSVWDTKP+WCQPWTITLTG LVIASSW+ IKSIAV
Sbjct: 61  SQFLDENGVVNDMDGYLNYHSFEYDSVWDTKPAWCQPWTITLTGLLVIASSWVAIKSIAV 120

Query: 172 TAVVLALICTWWYIFLYSYPKAYSDMIAERRRKVSDGVEDTFGVKRTQ 219
           TAV+L LIC WWYIFLYSYPKAYS+MIAERRRKVSDG+EDTFGVKRTQ
Sbjct: 121 TAVILTLICLWWYIFLYSYPKAYSEMIAERRRKVSDGLEDTFGVKRTQ 168

BLAST of CmaCh19G000340 vs. NCBI nr
Match: gi|659097086|ref|XP_008449434.1| (PREDICTED: uncharacterized protein LOC103491324 [Cucumis melo])

HSP 1 Score: 284.3 bits (726), Expect = 1.8e-73
Identity = 140/168 (83.33%), Postives = 156/168 (92.86%), Query Frame = 1

Query: 52  MGTVSLFLATSLRSHHFPS-TQTLLSNFAASSQVVSFTPKCTRFRRKSVVFGKQSSNEDE 111
           MG +SL LATSL S+HFPS TQTLLSNFAASSQ++SFTPKCT+FR K++VFGKQS  +++
Sbjct: 1   MGALSLLLATSLPSYHFPSSTQTLLSNFAASSQLLSFTPKCTKFRTKTLVFGKQSRIDND 60

Query: 112 SQFLDENGAVNDMDGYLNYHSFEYDSVWDTKPSWCQPWTITLTGSLVIASSWLLIKSIAV 171
           SQFLDENG V+DMDGYLNYHSFEYDSVWDTKPSWCQPWTITLTG LVIASSW+ IKS+AV
Sbjct: 61  SQFLDENGVVDDMDGYLNYHSFEYDSVWDTKPSWCQPWTITLTGLLVIASSWVAIKSVAV 120

Query: 172 TAVVLALICTWWYIFLYSYPKAYSDMIAERRRKVSDGVEDTFGVKRTQ 219
           TAV+L LIC WWYIFLYSYPKAYS+MIAERRRKVSDG+EDTFGVKRTQ
Sbjct: 121 TAVILTLICLWWYIFLYSYPKAYSEMIAERRRKVSDGLEDTFGVKRTQ 168

BLAST of CmaCh19G000340 vs. NCBI nr
Match: gi|224085479|ref|XP_002307589.1| (hypothetical protein POPTR_0005s23230g [Populus trichocarpa])

HSP 1 Score: 210.3 bits (534), Expect = 3.4e-51
Identity = 104/157 (66.24%), Postives = 127/157 (80.89%), Query Frame = 1

Query: 63  LRSHHFPSTQTLLSNFAASSQVVSFTPKCTRFRRKSVVFGKQSSN-EDESQFLDENGAVN 122
           LRS+ + S++T LS   +   +   T +  RFR K+VVFG  SS+  +ESQFLDENGAV+
Sbjct: 18  LRSNQYSSSRTHLSKPISYPHISLITSRSNRFRGKTVVFGGNSSDIPNESQFLDENGAVD 77

Query: 123 DMDGYLNYHSFEYDSVWDTKPSWCQPWTITLTGSLVIASSWLLIKSIAVTAVVLALICTW 182
           DMDGYLNY S EYDSVWDTKPSWCQPWTITLTG LVIA SWL++ S+ VT +VL LICTW
Sbjct: 78  DMDGYLNYLSLEYDSVWDTKPSWCQPWTITLTGVLVIAGSWLILHSVVVTTIVLLLICTW 137

Query: 183 WYIFLYSYPKAYSDMIAERRRKVSDGVEDTFGVKRTQ 219
           WYIFLYSYPK Y+DMIAERR++V++GVEDTFG+ ++Q
Sbjct: 138 WYIFLYSYPKVYADMIAERRKRVTNGVEDTFGMTKSQ 174

BLAST of CmaCh19G000340 vs. NCBI nr
Match: gi|743867305|ref|XP_011032695.1| (PREDICTED: uncharacterized protein LOC105131426 [Populus euphratica])

HSP 1 Score: 208.4 bits (529), Expect = 1.3e-50
Identity = 103/157 (65.61%), Postives = 126/157 (80.25%), Query Frame = 1

Query: 63  LRSHHFPSTQTLLSNFAASSQVVSFTPKCTRFRRKSVVFGKQSSN-EDESQFLDENGAVN 122
           LRS+ + S++T  S   +  Q+   T +  RFR K+VVFG  SS+  ++SQFLDENGAV+
Sbjct: 18  LRSNQYSSSRTHPSKPISYPQIALITSRSNRFRGKTVVFGGNSSDIPNDSQFLDENGAVD 77

Query: 123 DMDGYLNYHSFEYDSVWDTKPSWCQPWTITLTGSLVIASSWLLIKSIAVTAVVLALICTW 182
           DMDGYLNY S EYDSVWDTKPSWCQPWTITLTG LVIA SWL+  S+ VT +VL LICTW
Sbjct: 78  DMDGYLNYLSLEYDSVWDTKPSWCQPWTITLTGVLVIAGSWLIFHSVVVTTIVLLLICTW 137

Query: 183 WYIFLYSYPKAYSDMIAERRRKVSDGVEDTFGVKRTQ 219
           WYIFLYSYPK Y+DMIAERR++V++GVEDTFG+ ++Q
Sbjct: 138 WYIFLYSYPKVYADMIAERRKRVTNGVEDTFGMTKSQ 174

BLAST of CmaCh19G000340 vs. NCBI nr
Match: gi|470108608|ref|XP_004290604.1| (PREDICTED: uncharacterized protein LOC101298849 [Fragaria vesca subsp. vesca])

HSP 1 Score: 201.4 bits (511), Expect = 1.6e-48
Identity = 107/169 (63.31%), Postives = 129/169 (76.33%), Query Frame = 1

Query: 52  MGTVSLF--LATSLRSHHFPSTQTLLSNFAASSQVVSFTPKCTRFRRKSVVFGKQSSNED 111
           MGT+SLF  L   LR+H   S++T L N      V    P+  RFR K+VVFG +S +  
Sbjct: 1   MGTLSLFPTLYAPLRTH-LSSSKTHLCNPIFLPHVSVTYPQQRRFRSKNVVFGSKSVDPK 60

Query: 112 ESQFLDENGAVNDMDGYLNYHSFEYDSVWDTKPSWCQPWTITLTGSLVIASSWLLIKSIA 171
           ESQF DE+GAV+DMDGY+NY S EYDSVWDTKPSWCQPWTITLTG LVIA SWL++ S+ 
Sbjct: 61  ESQFFDEDGAVDDMDGYMNYLSLEYDSVWDTKPSWCQPWTITLTGVLVIAFSWLILHSVL 120

Query: 172 VTAVVLALICTWWYIFLYSYPKAYSDMIAERRRKVSDGVEDTFGVKRTQ 219
            T VV+ LI  WWYIFLYSYPKAY+DMIAERR++VS+GVEDTFG++ T+
Sbjct: 121 ATGVVVFLIGLWWYIFLYSYPKAYADMIAERRKRVSNGVEDTFGLRETR 168

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0KED9_CUCSA1.3e-7383.33Uncharacterized protein OS=Cucumis sativus GN=Csa_6G410630 PE=4 SV=1[more]
B9H895_POPTR2.4e-5166.24Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0005s23230g PE=4 SV=1[more]
B9S406_RICCO1.7e-4657.80Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0557330 PE=4 SV=1[more]
A0A067FMV2_CITSI2.3e-4658.48Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g030472mg PE=4 SV=1[more]
V4VVI3_9ROSI2.3e-4658.48Uncharacterized protein OS=Citrus clementina GN=CICLE_v10022514mg PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT4G02725.14.1e-3949.69 unknown protein[more]
Match NameE-valueIdentityDescription
gi|449444669|ref|XP_004140096.1|1.8e-7383.33PREDICTED: uncharacterized protein LOC101202761 [Cucumis sativus][more]
gi|659097086|ref|XP_008449434.1|1.8e-7383.33PREDICTED: uncharacterized protein LOC103491324 [Cucumis melo][more]
gi|224085479|ref|XP_002307589.1|3.4e-5166.24hypothetical protein POPTR_0005s23230g [Populus trichocarpa][more]
gi|743867305|ref|XP_011032695.1|1.3e-5065.61PREDICTED: uncharacterized protein LOC105131426 [Populus euphratica][more]
gi|470108608|ref|XP_004290604.1|1.6e-4863.31PREDICTED: uncharacterized protein LOC101298849 [Fragaria vesca subsp. vesca][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh19G000340.1CmaCh19G000340.1mRNA


Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR36046FAMILY NOT NAMEDcoord: 63..218
score: 2.0
NoneNo IPR availablePANTHERPTHR36046:SF1SUBFAMILY NOT NAMEDcoord: 63..218
score: 2.0

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CmaCh19G000340Cucumber (Gy14) v2cgybcmaB782
CmaCh19G000340Melon (DHL92) v3.6.1cmamedB532
CmaCh19G000340Melon (DHL92) v3.6.1cmamedB549
CmaCh19G000340Melon (DHL92) v3.6.1cmamedB553
CmaCh19G000340Silver-seed gourdcarcmaB0144
CmaCh19G000340Cucumber (Chinese Long) v3cmacucB0610
CmaCh19G000340Cucumber (Chinese Long) v3cmacucB0631
CmaCh19G000340Watermelon (97103) v2cmawmbB540
CmaCh19G000340Watermelon (97103) v2cmawmbB556
CmaCh19G000340Wax gourdcmawgoB0645
CmaCh19G000340Wax gourdcmawgoB0673
CmaCh19G000340Cucurbita maxima (Rimu)cmacmaB361
CmaCh19G000340Cucurbita maxima (Rimu)cmacmaB363
CmaCh19G000340Cucurbita maxima (Rimu)cmacmaB447
CmaCh19G000340Cucurbita maxima (Rimu)cmacmaB450
CmaCh19G000340Cucurbita maxima (Rimu)cmacmaB465
CmaCh19G000340Cucumber (Gy14) v1cgycmaB0525
CmaCh19G000340Cucurbita moschata (Rifu)cmacmoB506
CmaCh19G000340Cucurbita moschata (Rifu)cmacmoB521
CmaCh19G000340Cucurbita moschata (Rifu)cmacmoB523
CmaCh19G000340Cucurbita moschata (Rifu)cmacmoB536
CmaCh19G000340Wild cucumber (PI 183967)cmacpiB514
CmaCh19G000340Cucumber (Chinese Long) v2cmacuB524
CmaCh19G000340Melon (DHL92) v3.5.1cmameB460
CmaCh19G000340Melon (DHL92) v3.5.1cmameB477
CmaCh19G000340Watermelon (Charleston Gray)cmawcgB449
CmaCh19G000340Watermelon (Charleston Gray)cmawcgB467
CmaCh19G000340Watermelon (97103) v1cmawmB480
CmaCh19G000340Watermelon (97103) v1cmawmB487
CmaCh19G000340Cucurbita pepo (Zucchini)cmacpeB520
CmaCh19G000340Cucurbita pepo (Zucchini)cmacpeB530
CmaCh19G000340Cucurbita pepo (Zucchini)cmacpeB536
CmaCh19G000340Cucurbita pepo (Zucchini)cmacpeB543
CmaCh19G000340Cucurbita pepo (Zucchini)cmacpeB550
CmaCh19G000340Bottle gourd (USVL1VR-Ls)cmalsiB478
CmaCh19G000340Bottle gourd (USVL1VR-Ls)cmalsiB486