CmaCh19G000340 (gene) Cucurbita maxima (Rimu)
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TGATGGGGTATGGCTCAGCCGGTGCATCGAATTTTGTGGGCCACGAAGTTTATCCTTTGCTAAGCTTACTGGAACTCCCCAATTCGGCAGCTCAGCTCCATGCCGCCATAATTAGCAGACTACTTGGAAGTGGCCGCCATACAAAACCCAAATCTATGGGAACTGTTTCTCTATTCCTCGCAACGTCCCTACGATCGCACCATTTTCCTTCAACACAAACCCTTCTTTCTAACTTCGCAGCTTCGTCGCAAGTCGTTTCGTTTACTCCCAAATGCACTAGATTCCGCCGGAAAAGCGTGGTTTTCGGTAAGCAATCAAGCAACGAGGATGAATCTCAGTTTCTAGATGAAAATGGTGCCGTCAATGATATGGATGGATATTTGAATTACCACTCTTTCGAATATGACTCCGTTTGGGATACAAAGCCTTCTTGGTTAGCTATCTTATCCTGTTTTTTCATCGTTGATTTTGAGCAACTATCTAAAATTTGCTGTGATCTCTGTTTCTTTGAACTTTTAGGCTATCTAGAATTAGGTTTTCAGAGAAACCCTATATTAGGATTTTTGAATTAGTGCTAGCCAATCGATGAATTATGAATTTTTTCAACTCGGATTCTGGATATAACATGGTGGGTCAGGTACATTTGGAGTTCTAGTTGAAGAAGTCGAATGACCAATTGTGAATTGATTACTTAACTGGAATTATGCTGTTCTTCTTTAAACATATCACTTATTGCTTACTGTTTCTATCCACAAGCATGTGCTGATATAGTTTATGGCGTTGGTGTTCATCTCTTCATAATCTGGTCATAATTGGCATGTTTCTGTAGAGAATCCTCCTGATAGGCAAAATAACATGTTAATCTACAAGATTCTCTGTTCATAATTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATATTGATATATGAGCAAGAAATATTATCTCCATTGGTACAAGGCCTTTTGGGGAAACAAAAAATAAAGCCACGAGAACTTATGCTCAAAGTGGACAATATCATACTATTGTAGAAGGTTGTGATTCATAACATGGTATCAAGAGTCATGCTCTTAACTTAGTCATGTTAATAAAATCCTCAAATGTTGAACAAAGAACTTGTGAGCCTCGAAGGTGTGGTCAAAAGTGACTCAAGTGTGGAACAAAGAGTGTACTTTGTTGAGGGCTCTAGAGAAGGAGTTGAGCCTCAATTAAGAGGAGGTTGTTCGAGGGCTCCATAGGCCTCAGGAGGAGGCTCTATGGTGAGCTTTGTTCGAGGGGAGGATTGTTGAGGATTGTCAGGAGAGGAGTCCCATATTGACTAATTAAGGGAAAAATCATGGATTTATAAGTAAGAAATACTATCTCCACTAGTAAGAGGCCTTCTGGGGAAACCAAAAACAAAACCATGAGAGCGTCCCCAAAACAAAGCCATGAGAGCTTAGGCTCAAAGTGGACAATATCATACTATTGGAGAGGGTTGTGGTTCCTAACCTTCTCTTCTTTATAAGAATTAAAAGGAAATGCCATTTCTTCCATGATCGACTTCATTAGATAAGCTTTTTGTATTGTATCCAATCATATAGTATTCCAATGTATCAAAAAGCAACTGAACTGATAGAAAGAAAGTAAATGCATCAATGCTAAACAGGCAACTGGGGCTCACTTTGTGAGCAGAAATTTCTACAATAGTGATCCATATACCTGTTTGAACACATTCTTAGGGAGCATCTTTAAATAATTGCTTTTCCTTGGCCTACCTCATTGAATCTGCTAAATCCTTCCTTGTCCTACCTCATTGAATCTGCTAAATCCAGGCTTTGGCTGTTTGGCTGTCTGGATTGATGGGATGAGAAATGGGGTACTCATACTTGTTGAGGATGGTTGGGAGGGAGTCCCACATTAGCGAATTAAGGGAATGATCATGGGTTTATAAGTACGGAATGTTATCTCCATTGGACTGAGGACTTTTGGGGAAATCAAAAGCAAAGCCACGAGAGCTTATGCTCAAAGTAGATAAAATCATACCATTGTGGAGATTTGTGGTTCCTAACATGGTACCAAAGTCATGCCCTTAACTTAGTCATGTCAATAGAATCCTCAAGTGTCGAACAAAGAAGTTGCTAGCCTTGAAGGTGTAGTCAAAAGTGACTCAAGTGCCGAATAAAGGGTGTACTTTGTTTGAGGGCTCCAGAGAAAGGAGTCGAGCCTCAATTAAGGGGAGATTGTTCGAGGGCCACATAGACCTTAGGGGAGGCTCTATGGTGTACTTTGTTCTAGGGGAGGATTGTTGAGGATTGTTGGGAGGGAGTCCCGCATTAACTAATTAAGGGAATGATCATGGGTTTATAAGTAAGGAATATATCTCCATTGGTATGAGGCATTTTGGGAAACAAAAAACAAAATCATGAGAGCATATGCTCCAAGTGACAATATCATACCATCATGAAGGTTTGTTGTAACAGTCCAAGCCCACCTCTAACAGATATTGTCCACTTTGACCCGTTACGTATCGCCGTCAGCCTCATAGTTTTAAACCACGTCTATTAGCGAGAGGTTTTCACACCCTTATAAGAAATGATTCGTTCTCTTCTCCAACCGATGTGGGATCTTGCATTCATGGTTCCTAACAATACTTTCTCACAAGTGTCATTAAAGTTGCTAGTTGTTGTATGACATGCTTTTCTCTTACCTCTGATTTTGATGTTTTTTCTTTCTATCATTTTGTCACAAGGTGTCAACCATGGACTATAACACTGACAGGATCACTAGTAATTGCCTCTAGCTGGTTACTTATAAAGTCGATAGCAGTGACCGCAGTAGTACTCGCATTGATATGCACATGGTGGTACATCTTTCTTTACTCATACCCAAAGGTTTGTGTATCAAATCATCCACCCCCACCTCTCTTTGGTTAATATTGCATATCATATGAATTGAAGATCTTAAACAACTTAAAAAAGGCTGATAATAGGTGGATTTCTGATAGCATTAGGAAGGAGTAAGAGGAAGAAAGAAGGTGTTTGAGATGAGAAACATGTGTGCATTTGCAGGCTTATTCTGATATGATTGCGGAGAGAAGAAGAAAGGTTAGTGATGGAGTCGAAGACACATTTGGAGTGAAAAGGACACAGTGATTACCGACTGCTTCTCTTCTTCTACGAGGCTTTTGCTGACTTCTCTGTGCTTTGTGCTCTATGATCTATAAAGAACTGTAAACGCAGGTGGTATGAGAAACATATAGCTAAGCGAACCAAGTGTTTCTTCTTGAGACTCTTAAACCAATGCATAGTTTTTTTAAATTCTGTGATTTTAGATACTATTTTGGTTTTGATTCATTTTCGTTCGCAGACTTTCAAAGTATTCGTTTTAGTCCTTTTACATTTATAAAGTGACTGTTATGATCTCTGATTGCCAACTTTTCCATAC TGATGGGGTATGGCTCAGCCGGTGCATCGAATTTTGTGGGCCACGAAGTTTATCCTTTGCTAAGCTTACTGGAACTCCCCAATTCGGCAGCTCAGCTCCATGCCGCCATAATTAGCAGACTACTTGGAAGTGGCCGCCATACAAAACCCAAATCTATGGGAACTGTTTCTCTATTCCTCGCAACGTCCCTACGATCGCACCATTTTCCTTCAACACAAACCCTTCTTTCTAACTTCGCAGCTTCGTCGCAAGTCGTTTCGTTTACTCCCAAATGCACTAGATTCCGCCGGAAAAGCGTGGTTTTCGGTAAGCAATCAAGCAACGAGGATGAATCTCAGTTTCTAGATGAAAATGGTGCCGTCAATGATATGGATGGATATTTGAATTACCACTCTTTCGAATATGACTCCGTTTGGGATACAAAGCCTTCTTGGTGTCAACCATGGACTATAACACTGACAGGATCACTAGTAATTGCCTCTAGCTGGTTACTTATAAAGTCGATAGCAGTGACCGCAGTAGTACTCGCATTGATATGCACATGGTGGTACATCTTTCTTTACTCATACCCAAAGGCTTATTCTGATATGATTGCGGAGAGAAGAAGAAAGGTTAGTGATGGAGTCGAAGACACATTTGGAGTGAAAAGGACACAGTGATTACCGACTGCTTCTCTTCTTCTACGAGGCTTTTGCTGACTTCTCTGTGCTTTGTGCTCTATGATCTATAAAGAACTGTAAACGCAGGTGGTATGAGAAACATATAGCTAAGCGAACCAAGTGTTTCTTCTTGAGACTCTTAAACCAATGCATAGTTTTTTTAAATTCTGTGATTTTAGATACTATTTTGGTTTTGATTCATTTTCGTTCGCAGACTTTCAAAGTATTCGTTTTAGTCCTTTTACATTTATAAAGTGACTGTTATGATCTCTGATTGCCAACTTTTCCATAC ATGGGGTATGGCTCAGCCGGTGCATCGAATTTTGTGGGCCACGAAGTTTATCCTTTGCTAAGCTTACTGGAACTCCCCAATTCGGCAGCTCAGCTCCATGCCGCCATAATTAGCAGACTACTTGGAAGTGGCCGCCATACAAAACCCAAATCTATGGGAACTGTTTCTCTATTCCTCGCAACGTCCCTACGATCGCACCATTTTCCTTCAACACAAACCCTTCTTTCTAACTTCGCAGCTTCGTCGCAAGTCGTTTCGTTTACTCCCAAATGCACTAGATTCCGCCGGAAAAGCGTGGTTTTCGGTAAGCAATCAAGCAACGAGGATGAATCTCAGTTTCTAGATGAAAATGGTGCCGTCAATGATATGGATGGATATTTGAATTACCACTCTTTCGAATATGACTCCGTTTGGGATACAAAGCCTTCTTGGTGTCAACCATGGACTATAACACTGACAGGATCACTAGTAATTGCCTCTAGCTGGTTACTTATAAAGTCGATAGCAGTGACCGCAGTAGTACTCGCATTGATATGCACATGGTGGTACATCTTTCTTTACTCATACCCAAAGGCTTATTCTGATATGATTGCGGAGAGAAGAAGAAAGGTTAGTGATGGAGTCGAAGACACATTTGGAGTGAAAAGGACACAGTGA MGYGSAGASNFVGHEVYPLLSLLELPNSAAQLHAAIISRLLGSGRHTKPKSMGTVSLFLATSLRSHHFPSTQTLLSNFAASSQVVSFTPKCTRFRRKSVVFGKQSSNEDESQFLDENGAVNDMDGYLNYHSFEYDSVWDTKPSWCQPWTITLTGSLVIASSWLLIKSIAVTAVVLALICTWWYIFLYSYPKAYSDMIAERRRKVSDGVEDTFGVKRTQ
BLAST of CmaCh19G000340 vs. TrEMBL
Match: A0A0A0KED9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G410630 PE=4 SV=1) HSP 1 Score: 284.3 bits (726), Expect = 1.3e-73 Identity = 140/168 (83.33%), Postives = 155/168 (92.26%), Query Frame = 1
BLAST of CmaCh19G000340 vs. TrEMBL
Match: B9H895_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0005s23230g PE=4 SV=1) HSP 1 Score: 210.3 bits (534), Expect = 2.4e-51 Identity = 104/157 (66.24%), Postives = 127/157 (80.89%), Query Frame = 1
BLAST of CmaCh19G000340 vs. TrEMBL
Match: B9S406_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0557330 PE=4 SV=1) HSP 1 Score: 194.1 bits (492), Expect = 1.7e-46 Identity = 100/173 (57.80%), Postives = 126/173 (72.83%), Query Frame = 1
BLAST of CmaCh19G000340 vs. TrEMBL
Match: A0A067FMV2_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g030472mg PE=4 SV=1) HSP 1 Score: 193.7 bits (491), Expect = 2.3e-46 Identity = 100/171 (58.48%), Postives = 124/171 (72.51%), Query Frame = 1
BLAST of CmaCh19G000340 vs. TrEMBL
Match: V4VVI3_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10022514mg PE=4 SV=1) HSP 1 Score: 193.7 bits (491), Expect = 2.3e-46 Identity = 100/171 (58.48%), Postives = 124/171 (72.51%), Query Frame = 1
BLAST of CmaCh19G000340 vs. TAIR10
Match: AT4G02725.1 (AT4G02725.1 unknown protein) HSP 1 Score: 158.7 bits (400), Expect = 4.1e-39 Identity = 81/163 (49.69%), Postives = 109/163 (66.87%), Query Frame = 1
BLAST of CmaCh19G000340 vs. NCBI nr
Match: gi|449444669|ref|XP_004140096.1| (PREDICTED: uncharacterized protein LOC101202761 [Cucumis sativus]) HSP 1 Score: 284.3 bits (726), Expect = 1.8e-73 Identity = 140/168 (83.33%), Postives = 155/168 (92.26%), Query Frame = 1
BLAST of CmaCh19G000340 vs. NCBI nr
Match: gi|659097086|ref|XP_008449434.1| (PREDICTED: uncharacterized protein LOC103491324 [Cucumis melo]) HSP 1 Score: 284.3 bits (726), Expect = 1.8e-73 Identity = 140/168 (83.33%), Postives = 156/168 (92.86%), Query Frame = 1
BLAST of CmaCh19G000340 vs. NCBI nr
Match: gi|224085479|ref|XP_002307589.1| (hypothetical protein POPTR_0005s23230g [Populus trichocarpa]) HSP 1 Score: 210.3 bits (534), Expect = 3.4e-51 Identity = 104/157 (66.24%), Postives = 127/157 (80.89%), Query Frame = 1
BLAST of CmaCh19G000340 vs. NCBI nr
Match: gi|743867305|ref|XP_011032695.1| (PREDICTED: uncharacterized protein LOC105131426 [Populus euphratica]) HSP 1 Score: 208.4 bits (529), Expect = 1.3e-50 Identity = 103/157 (65.61%), Postives = 126/157 (80.25%), Query Frame = 1
BLAST of CmaCh19G000340 vs. NCBI nr
Match: gi|470108608|ref|XP_004290604.1| (PREDICTED: uncharacterized protein LOC101298849 [Fragaria vesca subsp. vesca]) HSP 1 Score: 201.4 bits (511), Expect = 1.6e-48 Identity = 107/169 (63.31%), Postives = 129/169 (76.33%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |