CmaCh18G009980 (gene) Cucurbita maxima (Rimu)

NameCmaCh18G009980
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu))
DescriptionReticulon-like protein
LocationCma_Chr18 : 8405169 .. 8407201 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexonthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCAGTGGCGGAGTTGATGCTGTGGAAGAAGAAGAGAGAATCGGCGGCGATGTTGGCCGGAATCAGCGGCGTTTGGTTTCTGCTTGAGGTCTTGGACTACCACTTTGTTACTCTGCTTTGCTATCTACTCATCATTACTATGCTTCTCCTCTTCTCTTGGAACAAATTGGCTCTTCTCATCAACTGGTAAATCCAATTCTTCTTATTCTATTTTTATCTCTAAACTTTCAATTTTGTTCGATTCTGCTTTAAATTCAGATAAATGTCGTAATTTTAAATCTTCGATAAGGTTTCGTTGAAAATAAAGTTGTACAAAATTTGTAAGATTTCAAAAGAAAAATAGTCTAATTCTAACTGTGAGATCCCAAATCCACGGGAGAGAAGAACGAGCGCCAGCGAAGACGCTAGGCCCTGAATGAATGAATTGTGGGATCTTACATTGATTGGAGAGGAGAACGAAACATTTTTTTTTACAAGGATGTGGAAATCTCTCAGCTATGTGTTTTAAAACTTTGAGGGAAAATTCGAAAGTGAAAGCTCAAAGAAGACCATATCTGTTACTAGTGGTTGTACACGGATTTTTTTCCATTAAAATTTGATTTGAAACTAACGTGTTATGAAAATATTTTGTTAAAATTACTGAGTGAATGGGTAAAAATTATCGATCATCATATGGTAAAAATTGATACGGGTAAAGTTGTTTTTTTTATAATAAGGTTTTAGAAGTAAAATAATTTTGTTTGATTTAAATAATTGGATGAATTTGCAAAAATTGAACATAGGATAAAAATTGTAGAACTCGTTTGAATTTATGGTAAAAATTGATACAGTAATTTTTTTTTAATCTTATTGGTGACGTGGCTTGGCAGGGCTCCACCGAGTGTGCATGATTTTGAGATCTCAAACGCCACTCTCACTCATTTCTTTGATACATTCAACTGGTTTCTCCACCACTTCTTTCAAATTTCAACTGCCCAAAACTTTAAGCTATTTGCAATGGTACCCTTACAAATCTCAGTATTTAATTTATACCTATTTTATATTTTTATACGCCAAAGTTGTATTGGTACCCTTCCAAATCTCACAATCCACCCCTTTCAGGGCCTAACATCTTCGCTGACATTCGTTTTTCTCTCCAATCAATTTGGAAATTCATAATTCACCCTCTTCGAGAGCCAGCATACTCATTGGCACATCGCCTCGTGTCCACCTCTTGGGGGCTCAGTGTTGTTGCTGGCACACTGAGCTTTTGGGGCCCAGCGTCCTTGCTGACACATTACGCAATGTCTGACTCTAATCTTATTTGTAACGGCCCAAACCCACCATGAATCGATATTATCATTTTTGAGCTTCCCTCAAGATTTTTAAAATGCGTCTTGCTAGGGAGAGGTTTCCACACCTTCTAAGGAATGCTTCGTTGTCCCTCTCCAACCGATGTACTATCTTACAATCCACCCTTTGCTAACACTCGTTCCCCTCTCCAATCAACGTGGGATCTCACACATAATCTTTATAAGATAGTAATTACTCGGGTGAGTAACTAAAACATGATCAAATGAATCAACCCATTTCGCAGGTAATGGGTAGCATTTGGTTGGTATCACTAATTGGTGAGCTGATGAACTCATTGAATCTCATATACATTGGTTGGTATCACTCTCTTCCTCTCTCACTTTCAATAGATTTTGTGTGTCTAAAAGGACCGTGACATGTTGTTCTTAATATTGAGCAGTGTTTTTGAGCTTACAAACAGTTCCAATTGTGTTGGACAAGTACGAGGAGGAGATTCATAAGCTTGTCTCCAACCTCAAGTCTTCCATGGACACCTTCTTCCACACTTTACACTCCAATTTTCTCAGCAAAATCCCAAGAAGGACCCATATCAAACAAACTTAGTTCCTAATACCCTATATTTCAATCACTTAGTTCGTCCCGAACCCGTCTTAGATTCAATCAAAATCGAGTTGTATTCCATGTTTTTAAATACGTGTTTGATAGTAGATTTAGAAATCCATTAATGTATGAACCCAT

mRNA sequence

ATGGCAGTGGCGGAGTTGATGCTGTGGAAGAAGAAGAGAGAATCGGCGGCGATGTTGGCCGGAATCAGCGGCGTTTGGTTTCTGCTTGAGGTCTTGGACTACCACTTTGTTACTCTGCTTTGCTATCTACTCATCATTACTATGCTTCTCCTCTTCTCTTGGAACAAATTGGCTCTTCTCATCAACTGGGCTCCACCGAGTGTGCATGATTTTGAGATCTCAAACGCCACTCTCACTCATTTCTTTGATACATTCAACTGGTTTCTCCACCACTTCTTTCAAATTTCAACTGCCCAAAACTTTAAGCTATTTGCAATGGTAATGGGTAGCATTTGGTTGGTATCACTAATTGGTGAGCTGATGAACTCATTGAATCTCATATACATTGTGTTTTTGAGCTTACAAACAGTTCCAATTGTGTTGGACAAGTACGAGGAGGAGATTCATAAGCTTGTCTCCAACCTCAAGTCTTCCATGGACACCTTCTTCCACACTTTACACTCCAATTTTCTCAGCAAAATCCCAAGAAGGACCCATATCAAACAAACTTAGTTCCTAATACCCTATATTTCAATCACTTAGTTCGTCCCGAACCCGTCTTAGATTCAATCAAAATCGAGTTGTATTCCATGTTTTTAAATACGTGTTTGATAGTAGATTTAGAAATCCATTAATGTATGAACCCAT

Coding sequence (CDS)

ATGGCAGTGGCGGAGTTGATGCTGTGGAAGAAGAAGAGAGAATCGGCGGCGATGTTGGCCGGAATCAGCGGCGTTTGGTTTCTGCTTGAGGTCTTGGACTACCACTTTGTTACTCTGCTTTGCTATCTACTCATCATTACTATGCTTCTCCTCTTCTCTTGGAACAAATTGGCTCTTCTCATCAACTGGGCTCCACCGAGTGTGCATGATTTTGAGATCTCAAACGCCACTCTCACTCATTTCTTTGATACATTCAACTGGTTTCTCCACCACTTCTTTCAAATTTCAACTGCCCAAAACTTTAAGCTATTTGCAATGGTAATGGGTAGCATTTGGTTGGTATCACTAATTGGTGAGCTGATGAACTCATTGAATCTCATATACATTGTGTTTTTGAGCTTACAAACAGTTCCAATTGTGTTGGACAAGTACGAGGAGGAGATTCATAAGCTTGTCTCCAACCTCAAGTCTTCCATGGACACCTTCTTCCACACTTTACACTCCAATTTTCTCAGCAAAATCCCAAGAAGGACCCATATCAAACAAACTTAG

Protein sequence

MAVAELMLWKKKRESAAMLAGISGVWFLLEVLDYHFVTLLCYLLIITMLLLFSWNKLALLINWAPPSVHDFEISNATLTHFFDTFNWFLHHFFQISTAQNFKLFAMVMGSIWLVSLIGELMNSLNLIYIVFLSLQTVPIVLDKYEEEIHKLVSNLKSSMDTFFHTLHSNFLSKIPRRTHIKQT
BLAST of CmaCh18G009980 vs. Swiss-Prot
Match: RTNLN_ARATH (Reticulon-like protein B14 OS=Arabidopsis thaliana GN=RTNLB14 PE=2 SV=2)

HSP 1 Score: 122.5 bits (306), Expect = 4.9e-27
Identity = 60/175 (34.29%), Postives = 109/175 (62.29%), Query Frame = 1

Query: 4   AELMLWKKKRESAAMLAGISGVWFLLEVLDYHFVTLLCYLLIITMLLLFSWNKL--ALLI 63
           A++M WK K+ES  +L   + +WFL EV++Y F+T LC +L++ + +   W+ +  + LI
Sbjct: 32  ADIMFWKNKKESGTILGVFTLIWFLFEVVEYPFITFLCQILLLFIFIFLIWSYIGSSQLI 91

Query: 64  NWAPPSVHDFEISNATLTHFFDTFNWFLHHFFQISTAQNFKLFAMVMGSIWLVSLIGELM 123
              PPS++D  IS +     F+  NWF+   + IS+ ++F+L  + + S+W++S++G   
Sbjct: 92  QSKPPSINDLRISESNWRFLFNKINWFIIKLYDISSGKDFRLLFLAVVSLWILSVVGNYF 151

Query: 124 NSLNLIYIVFLSLQTVPIVLDKYEEEIHKLVSNLKSSMDTFFHTLHSNFLSKIPR 177
           +SL L+YIVF+ L+T+P++ ++YEEE+    S     M    +  +S  ++KIP+
Sbjct: 152 SSLTLLYIVFVGLETIPMLYEQYEEELTYAASKSGRDMKKLLNKFNSKVINKIPK 206

BLAST of CmaCh18G009980 vs. Swiss-Prot
Match: RTNLI_ARATH (Reticulon-like protein B9 OS=Arabidopsis thaliana GN=RTNLB9 PE=2 SV=1)

HSP 1 Score: 107.8 bits (268), Expect = 1.2e-22
Identity = 56/180 (31.11%), Postives = 108/180 (60.00%), Query Frame = 1

Query: 3   VAELMLWKKKRESAAMLAGISGVWFLLEVLDYHFVTLLCYLLIITMLLLFSWNKLALLIN 62
           VA+++LW++ + +A ++ G+S +WFL+EV++Y+F+TL+C+  + +ML  F W+  +  +N
Sbjct: 39  VADILLWREPKIAATLVIGVSILWFLMEVVEYNFITLICHASMTSMLFFFIWSTASDFLN 98

Query: 63  WAPPSVHDFEISNATLTH----FFDTFNWFLHHFFQISTAQNFKLFAMVMGSIWLVSLIG 122
           W  P + +  +  ++       F   FN  L     ++  ++  LF +   S+++VS+IG
Sbjct: 99  WERPLIPEVVLDESSFKQLARSFHVRFNQILTKLLDVACGRDPPLFFLTTISLYIVSIIG 158

Query: 123 ELMNSLNLIYIVFLSLQTVPIVLDKYEEEIHKLVSNLKSSMDTFFHTLHSNFLSKIPRRT 179
              N +NL++I F+S+QT+P++ + YE+++      L   M   +  + +N LSKIPR T
Sbjct: 159 TYFNFVNLLFIGFVSMQTLPVMYEMYEDDVDTAAGKLMRKMKKLYKKVDTNVLSKIPRGT 218

BLAST of CmaCh18G009980 vs. Swiss-Prot
Match: RTNLA_ARATH (Reticulon-like protein B1 OS=Arabidopsis thaliana GN=RTNLB1 PE=1 SV=1)

HSP 1 Score: 96.7 bits (239), Expect = 2.9e-19
Identity = 51/176 (28.98%), Postives = 95/176 (53.98%), Query Frame = 1

Query: 4   AELMLWKKKRESAAMLAGISGVWFLLEVLDYHFVTLLCYLLIITMLLLFSWNKLALLINW 63
           A++ +WK K+ S  +L G +  W + E+++YH +TLLC+++I+ + +LF W+   + IN 
Sbjct: 90  ADIFMWKNKKMSGGVLGGATAAWVVFELMEYHLLTLLCHVMIVVLAVLFLWSNATMFINK 149

Query: 64  APPSVHDFEISNATLTHFFDTFNWFLHHFF----QISTAQNFKLFAMVMGSIWLVSLIGE 123
           +PP + +  I    +          ++  F    +I++ ++ K F + +  +W++S++G 
Sbjct: 150 SPPKIPEVHIPEEPILQLASGLRIEINRGFSSLREIASGRDLKKFLIAIAGLWVLSILGG 209

Query: 124 LMNSLNLIYIVFLSLQTVPIVLDKYEEEIHKLVSNLKSSMDTFFHTLHSNFLSKIP 176
             N L L YI  + L TVP+  DKYE+++  L       +   +  L    LSKIP
Sbjct: 210 CFNFLTLAYIALVLLFTVPLAYDKYEDKVDPLGEKAMIELKKQYAVLDEKVLSKIP 265

BLAST of CmaCh18G009980 vs. Swiss-Prot
Match: RTNLB_ARATH (Reticulon-like protein B2 OS=Arabidopsis thaliana GN=RTNLB2 PE=1 SV=1)

HSP 1 Score: 89.7 bits (221), Expect = 3.5e-17
Identity = 49/177 (27.68%), Postives = 93/177 (52.54%), Query Frame = 1

Query: 4   AELMLWKKKRESAAMLAGISGVWFLLEVLDYHFVTLLCYLLIITMLLLFSWNKLALLINW 63
           A++ +WK K+ S  +  G +  W L E+++YH +TLLC+++I+ + +LF W+   + I+ 
Sbjct: 86  ADIFMWKDKKMSGGVFGGATVAWVLFELMEYHLLTLLCHVMIVALAVLFLWSNATMFIHK 145

Query: 64  APPSVHDFEISNATLTHFFD----TFNWFLHHFFQISTAQNFKLFAMVMGSIWLVSLIGE 123
           +PP + +  I    L           N  +    +I++ ++ K F   +  +W++S++G 
Sbjct: 146 SPPKIPEVHIPEEPLLQLASGLRIEINRGISSLREIASGRDIKKFLSAIAGLWVLSILGG 205

Query: 124 LMNSLNLIYIVFLSLQTVPIVLDKYEEEIHKLVSNLKSSMDTFFHTLHSNFLSKIPR 177
             + L L YI  + L TVP+  DKYE+++        + +   +  L +   SKIPR
Sbjct: 206 CYSFLTLAYIALVLLFTVPLFYDKYEDKVDSYGEKAMAELKKQYAVLDAKVFSKIPR 262

BLAST of CmaCh18G009980 vs. Swiss-Prot
Match: RTNLE_ARATH (Reticulon-like protein B5 OS=Arabidopsis thaliana GN=RTNLB5 PE=1 SV=1)

HSP 1 Score: 88.6 bits (218), Expect = 7.8e-17
Identity = 51/176 (28.98%), Postives = 93/176 (52.84%), Query Frame = 1

Query: 4   AELMLWKKKRESAAMLAGISGVWFLLEVLDYHFVTLLCYLLIITMLLLFSWNKLALLINW 63
           A++ LW+ K+ S A+L   + +W L E+++YH ++LLC++ I+ +  LF W+    LIN 
Sbjct: 69  ADVFLWRDKKLSGAVLGVATAIWVLFELVEYHLLSLLCHISILALGGLFLWSNAHTLINK 128

Query: 64  APPSVHDFEISNATLTHFFDTFNWFLHHFF----QISTAQNFKLFAMVMGSIWLVSLIGE 123
             P + +  +          +    L+  F     I+  ++ K F MV+  +W++S++G 
Sbjct: 129 TSPQIPEIHVPEEAFLVVASSLRNELNQAFVILRSIALGRDLKKFLMVVVGLWIISVVGN 188

Query: 124 LMNSLNLIYIVFLSLQTVPIVLDKYEEEIHKLVSNLKSSMDTFFHTLHSNFLSKIP 176
             N L L+YI F+ L TVP++ +K+E+++  L       +   +       LSKIP
Sbjct: 189 WFNFLTLVYICFVILHTVPMLYEKHEDKVDPLAEKAMKELQKQYVVFDEKVLSKIP 244

BLAST of CmaCh18G009980 vs. TrEMBL
Match: A0A151U771_CAJCA (Reticulon-like protein OS=Cajanus cajan GN=KK1_007833 PE=4 SV=1)

HSP 1 Score: 150.6 bits (379), Expect = 1.9e-33
Identity = 76/174 (43.68%), Postives = 115/174 (66.09%), Query Frame = 1

Query: 3   VAELMLWKKKRESAAMLAGISGVWFLLEVLDYHFVTLLCYLLIITMLLLFSWNKLALLIN 62
           +A+++LWK K  +AA++AG S +WFL EV++ HFVTLLCY+++  ML+LF W   A LI 
Sbjct: 33  LADILLWKDKISAAAIVAGFSIIWFLFEVVECHFVTLLCYIIMAIMLVLFVWYNAAGLIT 92

Query: 63  WAPPSVHDFEISNATLTHFFDTFNWFLHHFFQISTAQNFKLFAMVMGSIWLVSLIGELMN 122
           W+ P ++DFEI   T  +F+   N FL  F+ IST ++  LF + +  +W++S IG    
Sbjct: 93  WSLPQIYDFEIPEPTFRYFYKKLNSFLRKFYDISTGKDLTLFFVTVSGLWIMSAIGNYFT 152

Query: 123 SLNLIYIVFLSLQTVPIVLDKYEEEIHKLVSNLKSSMDTFFHTLHSNFLSKIPR 177
           +LNL+YI+FL L T+PI+ ++YE E++ L S     +   F+T  S  L+KIPR
Sbjct: 153 TLNLLYIMFLCLVTLPIMYERYEHEVNYLASKGNQDVKRLFNTFDSKVLNKIPR 206

BLAST of CmaCh18G009980 vs. TrEMBL
Match: A0A0L9U0K2_PHAAN (Reticulon-like protein OS=Phaseolus angularis GN=LR48_Vigan02g244100 PE=4 SV=1)

HSP 1 Score: 149.8 bits (377), Expect = 3.2e-33
Identity = 76/174 (43.68%), Postives = 116/174 (66.67%), Query Frame = 1

Query: 3   VAELMLWKKKRESAAMLAGISGVWFLLEVLDYHFVTLLCYLLIITMLLLFSWNKLALLIN 62
           +A+++LWK K  SA M+AG S +WFL EV++Y+F+TLLC++LI  ML+LF W   A LI 
Sbjct: 30  LADILLWKDKISSATMVAGFSMIWFLFEVVEYNFLTLLCHILIAVMLVLFVWYNAAGLIT 89

Query: 63  WAPPSVHDFEISNATLTHFFDTFNWFLHHFFQISTAQNFKLFAMVMGSIWLVSLIGELMN 122
           W+ P ++DF+I   T    F   N FL +F+ IST ++  LF + +  +W++S IG    
Sbjct: 90  WSLPQIYDFQIPEPTFRFLFQKLNSFLRNFYDISTGKDLTLFFVTITGLWVMSAIGNYFT 149

Query: 123 SLNLIYIVFLSLQTVPIVLDKYEEEIHKLVSNLKSSMDTFFHTLHSNFLSKIPR 177
           +LNL+YI+FL L T+PI+ ++YE+E++ L S     +   F+TL +  L+KIPR
Sbjct: 150 TLNLLYILFLCLVTLPIMYERYEQEVNYLASKGNQDVKRLFNTLDNKVLNKIPR 203

BLAST of CmaCh18G009980 vs. TrEMBL
Match: A0A0S3SLS4_PHAAN (Reticulon-like protein OS=Vigna angularis var. angularis GN=Vigan.08G034200 PE=4 SV=1)

HSP 1 Score: 149.8 bits (377), Expect = 3.2e-33
Identity = 76/174 (43.68%), Postives = 116/174 (66.67%), Query Frame = 1

Query: 3   VAELMLWKKKRESAAMLAGISGVWFLLEVLDYHFVTLLCYLLIITMLLLFSWNKLALLIN 62
           +A+++LWK K  SA M+AG S +WFL EV++Y+F+TLLC++LI  ML+LF W   A LI 
Sbjct: 30  LADILLWKDKISSATMVAGFSMIWFLFEVVEYNFLTLLCHILIAVMLVLFVWYNAAGLIT 89

Query: 63  WAPPSVHDFEISNATLTHFFDTFNWFLHHFFQISTAQNFKLFAMVMGSIWLVSLIGELMN 122
           W+ P ++DF+I   T    F   N FL +F+ IST ++  LF + +  +W++S IG    
Sbjct: 90  WSLPQIYDFQIPEPTFRFLFQKLNSFLRNFYDISTGKDLTLFFVTITGLWVMSAIGNYFT 149

Query: 123 SLNLIYIVFLSLQTVPIVLDKYEEEIHKLVSNLKSSMDTFFHTLHSNFLSKIPR 177
           +LNL+YI+FL L T+PI+ ++YE+E++ L S     +   F+TL +  L+KIPR
Sbjct: 150 TLNLLYILFLCLVTLPIMYERYEQEVNYLASKGNQDVKRLFNTLDNKVLNKIPR 203

BLAST of CmaCh18G009980 vs. TrEMBL
Match: A0A0B2SCC1_GLYSO (Reticulon-like protein OS=Glycine soja GN=glysoja_020145 PE=4 SV=1)

HSP 1 Score: 149.4 bits (376), Expect = 4.1e-33
Identity = 76/174 (43.68%), Postives = 115/174 (66.09%), Query Frame = 1

Query: 3   VAELMLWKKKRESAAMLAGISGVWFLLEVLDYHFVTLLCYLLIITMLLLFSWNKLALLIN 62
           +A+++LWK K  SA+M+AG S +WFL EV++Y+F+TLLC++L+  ML+LF W   A LI 
Sbjct: 30  LADILLWKDKISSASMVAGFSIIWFLFEVVEYNFLTLLCHILMAIMLILFVWYNAAGLIT 89

Query: 63  WAPPSVHDFEISNATLTHFFDTFNWFLHHFFQISTAQNFKLFAMVMGSIWLVSLIGELMN 122
           W  P ++DF+I   T    F  FN FL  F+ IST ++  LF + +  +W++S IG    
Sbjct: 90  WNLPQIYDFQIPEPTFRFLFQKFNSFLRRFYDISTGKDLTLFFVTIAGLWIMSAIGNYFT 149

Query: 123 SLNLIYIVFLSLQTVPIVLDKYEEEIHKLVSNLKSSMDTFFHTLHSNFLSKIPR 177
           +LNL+YI+FL L T+PI+ ++YE E++ L S     +   F+TL +  L+KIPR
Sbjct: 150 TLNLLYIMFLCLVTLPIMYERYEYEVNYLASKGNQDVQRLFNTLDTKVLTKIPR 203

BLAST of CmaCh18G009980 vs. TrEMBL
Match: I1NFN7_SOYBN (Reticulon-like protein OS=Glycine max PE=4 SV=1)

HSP 1 Score: 149.4 bits (376), Expect = 4.1e-33
Identity = 76/174 (43.68%), Postives = 115/174 (66.09%), Query Frame = 1

Query: 3   VAELMLWKKKRESAAMLAGISGVWFLLEVLDYHFVTLLCYLLIITMLLLFSWNKLALLIN 62
           +A+++LWK K  SA+M+AG S +WFL EV++Y+F+TLLC++L+  ML+LF W   A LI 
Sbjct: 30  LADILLWKDKISSASMVAGFSIIWFLFEVVEYNFLTLLCHILMAIMLILFVWYNAAGLIT 89

Query: 63  WAPPSVHDFEISNATLTHFFDTFNWFLHHFFQISTAQNFKLFAMVMGSIWLVSLIGELMN 122
           W  P ++DF+I   T    F  FN FL  F+ IST ++  LF + +  +W++S IG    
Sbjct: 90  WNLPQIYDFQIPEPTFRFLFQKFNSFLRRFYDISTGKDLTLFFVTIAGLWIMSAIGNYFT 149

Query: 123 SLNLIYIVFLSLQTVPIVLDKYEEEIHKLVSNLKSSMDTFFHTLHSNFLSKIPR 177
           +LNL+YI+FL L T+PI+ ++YE E++ L S     +   F+TL +  L+KIPR
Sbjct: 150 TLNLLYIMFLCLVTLPIMYERYEYEVNYLASKGNQDVQRLFNTLDTKVLTKIPR 203

BLAST of CmaCh18G009980 vs. TAIR10
Match: AT3G18260.1 (AT3G18260.1 Reticulon family protein)

HSP 1 Score: 107.8 bits (268), Expect = 7.0e-24
Identity = 56/180 (31.11%), Postives = 108/180 (60.00%), Query Frame = 1

Query: 3   VAELMLWKKKRESAAMLAGISGVWFLLEVLDYHFVTLLCYLLIITMLLLFSWNKLALLIN 62
           VA+++LW++ + +A ++ G+S +WFL+EV++Y+F+TL+C+  + +ML  F W+  +  +N
Sbjct: 39  VADILLWREPKIAATLVIGVSILWFLMEVVEYNFITLICHASMTSMLFFFIWSTASDFLN 98

Query: 63  WAPPSVHDFEISNATLTH----FFDTFNWFLHHFFQISTAQNFKLFAMVMGSIWLVSLIG 122
           W  P + +  +  ++       F   FN  L     ++  ++  LF +   S+++VS+IG
Sbjct: 99  WERPLIPEVVLDESSFKQLARSFHVRFNQILTKLLDVACGRDPPLFFLTTISLYIVSIIG 158

Query: 123 ELMNSLNLIYIVFLSLQTVPIVLDKYEEEIHKLVSNLKSSMDTFFHTLHSNFLSKIPRRT 179
              N +NL++I F+S+QT+P++ + YE+++      L   M   +  + +N LSKIPR T
Sbjct: 159 TYFNFVNLLFIGFVSMQTLPVMYEMYEDDVDTAAGKLMRKMKKLYKKVDTNVLSKIPRGT 218

BLAST of CmaCh18G009980 vs. TAIR10
Match: AT4G23630.1 (AT4G23630.1 VIRB2-interacting protein 1)

HSP 1 Score: 96.7 bits (239), Expect = 1.6e-20
Identity = 51/176 (28.98%), Postives = 95/176 (53.98%), Query Frame = 1

Query: 4   AELMLWKKKRESAAMLAGISGVWFLLEVLDYHFVTLLCYLLIITMLLLFSWNKLALLINW 63
           A++ +WK K+ S  +L G +  W + E+++YH +TLLC+++I+ + +LF W+   + IN 
Sbjct: 90  ADIFMWKNKKMSGGVLGGATAAWVVFELMEYHLLTLLCHVMIVVLAVLFLWSNATMFINK 149

Query: 64  APPSVHDFEISNATLTHFFDTFNWFLHHFF----QISTAQNFKLFAMVMGSIWLVSLIGE 123
           +PP + +  I    +          ++  F    +I++ ++ K F + +  +W++S++G 
Sbjct: 150 SPPKIPEVHIPEEPILQLASGLRIEINRGFSSLREIASGRDLKKFLIAIAGLWVLSILGG 209

Query: 124 LMNSLNLIYIVFLSLQTVPIVLDKYEEEIHKLVSNLKSSMDTFFHTLHSNFLSKIP 176
             N L L YI  + L TVP+  DKYE+++  L       +   +  L    LSKIP
Sbjct: 210 CFNFLTLAYIALVLLFTVPLAYDKYEDKVDPLGEKAMIELKKQYAVLDEKVLSKIP 265

BLAST of CmaCh18G009980 vs. TAIR10
Match: AT1G68230.2 (AT1G68230.2 Reticulon family protein)

HSP 1 Score: 93.2 bits (230), Expect = 1.8e-19
Identity = 45/128 (35.16%), Postives = 81/128 (63.28%), Query Frame = 1

Query: 4   AELMLWKKKRESAAMLAGISGVWFLLEVLDYHFVTLLCYLLIITMLLLFSWNKL--ALLI 63
           A++M WK K+ES  +L   + +WFL EV++Y F+T LC +L++ + +   W+ +  + LI
Sbjct: 32  ADIMFWKNKKESGTILGVFTLIWFLFEVVEYPFITFLCQILLLFIFIFLIWSYIGSSQLI 91

Query: 64  NWAPPSVHDFEISNATLTHFFDTFNWFLHHFFQISTAQNFKLFAMVMGSIWLVSLIGELM 123
              PPS++D  IS +     F+  NWF+   + IS+ ++F+L  + + S+W++S++G   
Sbjct: 92  QSKPPSINDLRISESNWRFLFNKINWFIIKLYDISSGKDFRLLFLAVVSLWILSVVGNYF 151

Query: 124 NSLNLIYI 130
           +SL L+YI
Sbjct: 152 SSLTLLYI 159

BLAST of CmaCh18G009980 vs. TAIR10
Match: AT4G11220.1 (AT4G11220.1 VIRB2-interacting protein 2)

HSP 1 Score: 89.7 bits (221), Expect = 2.0e-18
Identity = 49/177 (27.68%), Postives = 93/177 (52.54%), Query Frame = 1

Query: 4   AELMLWKKKRESAAMLAGISGVWFLLEVLDYHFVTLLCYLLIITMLLLFSWNKLALLINW 63
           A++ +WK K+ S  +  G +  W L E+++YH +TLLC+++I+ + +LF W+   + I+ 
Sbjct: 86  ADIFMWKDKKMSGGVFGGATVAWVLFELMEYHLLTLLCHVMIVALAVLFLWSNATMFIHK 145

Query: 64  APPSVHDFEISNATLTHFFD----TFNWFLHHFFQISTAQNFKLFAMVMGSIWLVSLIGE 123
           +PP + +  I    L           N  +    +I++ ++ K F   +  +W++S++G 
Sbjct: 146 SPPKIPEVHIPEEPLLQLASGLRIEINRGISSLREIASGRDIKKFLSAIAGLWVLSILGG 205

Query: 124 LMNSLNLIYIVFLSLQTVPIVLDKYEEEIHKLVSNLKSSMDTFFHTLHSNFLSKIPR 177
             + L L YI  + L TVP+  DKYE+++        + +   +  L +   SKIPR
Sbjct: 206 CYSFLTLAYIALVLLFTVPLFYDKYEDKVDSYGEKAMAELKKQYAVLDAKVFSKIPR 262

BLAST of CmaCh18G009980 vs. TAIR10
Match: AT2G46170.1 (AT2G46170.1 Reticulon family protein)

HSP 1 Score: 88.6 bits (218), Expect = 4.4e-18
Identity = 51/176 (28.98%), Postives = 93/176 (52.84%), Query Frame = 1

Query: 4   AELMLWKKKRESAAMLAGISGVWFLLEVLDYHFVTLLCYLLIITMLLLFSWNKLALLINW 63
           A++ LW+ K+ S A+L   + +W L E+++YH ++LLC++ I+ +  LF W+    LIN 
Sbjct: 69  ADVFLWRDKKLSGAVLGVATAIWVLFELVEYHLLSLLCHISILALGGLFLWSNAHTLINK 128

Query: 64  APPSVHDFEISNATLTHFFDTFNWFLHHFF----QISTAQNFKLFAMVMGSIWLVSLIGE 123
             P + +  +          +    L+  F     I+  ++ K F MV+  +W++S++G 
Sbjct: 129 TSPQIPEIHVPEEAFLVVASSLRNELNQAFVILRSIALGRDLKKFLMVVVGLWIISVVGN 188

Query: 124 LMNSLNLIYIVFLSLQTVPIVLDKYEEEIHKLVSNLKSSMDTFFHTLHSNFLSKIP 176
             N L L+YI F+ L TVP++ +K+E+++  L       +   +       LSKIP
Sbjct: 189 WFNFLTLVYICFVILHTVPMLYEKHEDKVDPLAEKAMKELQKQYVVFDEKVLSKIP 244

BLAST of CmaCh18G009980 vs. NCBI nr
Match: gi|502120705|ref|XP_004497054.1| (PREDICTED: reticulon-like protein B14 [Cicer arietinum])

HSP 1 Score: 153.7 bits (387), Expect = 3.1e-34
Identity = 77/174 (44.25%), Postives = 117/174 (67.24%), Query Frame = 1

Query: 3   VAELMLWKKKRESAAMLAGISGVWFLLEVLDYHFVTLLCYLLIITMLLLFSWNKLALLIN 62
           +A+++LWK KR SAA++AG+S VWFL EV++Y+ VT+LC++LI  ML+LF W   A LI 
Sbjct: 32  LADILLWKDKRTSAAVVAGVSTVWFLFEVVEYNLVTMLCHILIALMLILFIWYNAAGLIT 91

Query: 63  WAPPSVHDFEISNATLTHFFDTFNWFLHHFFQISTAQNFKLFAMVMGSIWLVSLIGELMN 122
           W  P ++D EIS + L  F   FN FL  F+ IST ++ KLF + +  +W++S IG   +
Sbjct: 92  WKVPDIYDLEISESNLRFFHTKFNLFLRKFYDISTGKDLKLFFVTIACLWIMSTIGNFFS 151

Query: 123 SLNLIYIVFLSLQTVPIVLDKYEEEIHKLVSNLKSSMDTFFHTLHSNFLSKIPR 177
           ++NL+Y +F+ + T+PI+  +YE E+  L S     +   F+TL S FL++IPR
Sbjct: 152 TVNLLYTIFMCVVTLPIMYQRYEYEVDYLASKGNQDVKRLFNTLDSKFLNRIPR 205

BLAST of CmaCh18G009980 vs. NCBI nr
Match: gi|1021565600|ref|XP_016174148.1| (PREDICTED: reticulon-like protein B14 [Arachis ipaensis])

HSP 1 Score: 152.1 bits (383), Expect = 9.2e-34
Identity = 74/174 (42.53%), Postives = 116/174 (66.67%), Query Frame = 1

Query: 3   VAELMLWKKKRESAAMLAGISGVWFLLEVLDYHFVTLLCYLLIITMLLLFSWNKLALLIN 62
           +AE++LW+ K+ SAA++ G S +WFL EV++Y+ V LLC++LI  ML+LF W   A LI 
Sbjct: 31  IAEILLWRDKKLSAAIVGGFSFIWFLFEVVEYNLVPLLCHILIAIMLILFVWYNAAGLIT 90

Query: 63  WAPPSVHDFEISNATLTHFFDTFNWFLHHFFQISTAQNFKLFAMVMGSIWLVSLIGELMN 122
           W  P ++ FEI  +T  + ++  NWFL  F+ IST ++  LF + +  +W++S IG L N
Sbjct: 91  WNIPEIYYFEIPESTFAYLYNKLNWFLMKFYDISTGKDLTLFFLTISGLWIISAIGNLFN 150

Query: 123 SLNLIYIVFLSLQTVPIVLDKYEEEIHKLVSNLKSSMDTFFHTLHSNFLSKIPR 177
           +LNLIY++F+ + ++P + ++YEEE++ L       +   F TL S FL+KIPR
Sbjct: 151 TLNLIYLLFVCMMSLPAMYERYEEEVNYLAFRGNQDVRRLFRTLDSKFLNKIPR 204

BLAST of CmaCh18G009980 vs. NCBI nr
Match: gi|1012244403|ref|XP_015941798.1| (PREDICTED: reticulon-like protein B14 [Arachis duranensis])

HSP 1 Score: 152.1 bits (383), Expect = 9.2e-34
Identity = 76/174 (43.68%), Postives = 116/174 (66.67%), Query Frame = 1

Query: 3   VAELMLWKKKRESAAMLAGISGVWFLLEVLDYHFVTLLCYLLIITMLLLFSWNKLALLIN 62
           +AE++LW+ K+ SAA++ G S VWFL EV++Y+ V LLC++LI  ML+LF W   A LI 
Sbjct: 31  LAEILLWRDKKLSAAIVGGFSFVWFLFEVVEYNLVPLLCHILIAIMLILFVWYNAAGLIT 90

Query: 63  WAPPSVHDFEISNATLTHFFDTFNWFLHHFFQISTAQNFKLFAMVMGSIWLVSLIGELMN 122
           W  P ++ FEI  +T  + ++  NWFL  F+ IST ++  LF + +  +W+VS IG L N
Sbjct: 91  WNIPEIYYFEIPESTFAYLYNKLNWFLMKFYDISTGKDLTLFFLTISGLWIVSAIGNLFN 150

Query: 123 SLNLIYIVFLSLQTVPIVLDKYEEEIHKLVSNLKSSMDTFFHTLHSNFLSKIPR 177
           +LNLIY++F+ + ++P + ++YEEE++ L       +   F TL S FL+KIPR
Sbjct: 151 TLNLIYLLFVCMMSLPAMYERYEEEVNYLAFRGNQDVRRLFRTLDSKFLNKIPR 204

BLAST of CmaCh18G009980 vs. NCBI nr
Match: gi|951023123|ref|XP_014513097.1| (PREDICTED: reticulon-like protein B14 [Vigna radiata var. radiata])

HSP 1 Score: 151.0 bits (380), Expect = 2.0e-33
Identity = 77/174 (44.25%), Postives = 116/174 (66.67%), Query Frame = 1

Query: 3   VAELMLWKKKRESAAMLAGISGVWFLLEVLDYHFVTLLCYLLIITMLLLFSWNKLALLIN 62
           +A+++LWK K  SA M+AG S +WFL EV++Y+F+TLLC++LI  ML+LF W   A LI 
Sbjct: 30  LADILLWKDKISSATMVAGFSMIWFLFEVVEYNFLTLLCHILIAVMLVLFVWYNAAGLIT 89

Query: 63  WAPPSVHDFEISNATLTHFFDTFNWFLHHFFQISTAQNFKLFAMVMGSIWLVSLIGELMN 122
           W  P ++DF+I   T    F   N FL +F+ IST ++  LF + +  +W++S IG    
Sbjct: 90  WNLPQIYDFQIPEPTFRFLFQKLNSFLRNFYDISTGKDLTLFFVTITGLWVMSAIGNYFT 149

Query: 123 SLNLIYIVFLSLQTVPIVLDKYEEEIHKLVSNLKSSMDTFFHTLHSNFLSKIPR 177
           +LNL+YI+FLSL T+PI+ ++YE+E++ L S     +   F+TL +  L+KIPR
Sbjct: 150 TLNLVYILFLSLVTLPIMYERYEQEVNYLASKGNQDVKRLFNTLDNKVLNKIPR 203

BLAST of CmaCh18G009980 vs. NCBI nr
Match: gi|1012363950|gb|KYP75133.1| (Reticulon-like protein B9 [Cajanus cajan])

HSP 1 Score: 150.6 bits (379), Expect = 2.7e-33
Identity = 76/174 (43.68%), Postives = 115/174 (66.09%), Query Frame = 1

Query: 3   VAELMLWKKKRESAAMLAGISGVWFLLEVLDYHFVTLLCYLLIITMLLLFSWNKLALLIN 62
           +A+++LWK K  +AA++AG S +WFL EV++ HFVTLLCY+++  ML+LF W   A LI 
Sbjct: 33  LADILLWKDKISAAAIVAGFSIIWFLFEVVECHFVTLLCYIIMAIMLVLFVWYNAAGLIT 92

Query: 63  WAPPSVHDFEISNATLTHFFDTFNWFLHHFFQISTAQNFKLFAMVMGSIWLVSLIGELMN 122
           W+ P ++DFEI   T  +F+   N FL  F+ IST ++  LF + +  +W++S IG    
Sbjct: 93  WSLPQIYDFEIPEPTFRYFYKKLNSFLRKFYDISTGKDLTLFFVTVSGLWIMSAIGNYFT 152

Query: 123 SLNLIYIVFLSLQTVPIVLDKYEEEIHKLVSNLKSSMDTFFHTLHSNFLSKIPR 177
           +LNL+YI+FL L T+PI+ ++YE E++ L S     +   F+T  S  L+KIPR
Sbjct: 153 TLNLLYIMFLCLVTLPIMYERYEHEVNYLASKGNQDVKRLFNTFDSKVLNKIPR 206

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
RTNLN_ARATH4.9e-2734.29Reticulon-like protein B14 OS=Arabidopsis thaliana GN=RTNLB14 PE=2 SV=2[more]
RTNLI_ARATH1.2e-2231.11Reticulon-like protein B9 OS=Arabidopsis thaliana GN=RTNLB9 PE=2 SV=1[more]
RTNLA_ARATH2.9e-1928.98Reticulon-like protein B1 OS=Arabidopsis thaliana GN=RTNLB1 PE=1 SV=1[more]
RTNLB_ARATH3.5e-1727.68Reticulon-like protein B2 OS=Arabidopsis thaliana GN=RTNLB2 PE=1 SV=1[more]
RTNLE_ARATH7.8e-1728.98Reticulon-like protein B5 OS=Arabidopsis thaliana GN=RTNLB5 PE=1 SV=1[more]
Match NameE-valueIdentityDescription
A0A151U771_CAJCA1.9e-3343.68Reticulon-like protein OS=Cajanus cajan GN=KK1_007833 PE=4 SV=1[more]
A0A0L9U0K2_PHAAN3.2e-3343.68Reticulon-like protein OS=Phaseolus angularis GN=LR48_Vigan02g244100 PE=4 SV=1[more]
A0A0S3SLS4_PHAAN3.2e-3343.68Reticulon-like protein OS=Vigna angularis var. angularis GN=Vigan.08G034200 PE=4... [more]
A0A0B2SCC1_GLYSO4.1e-3343.68Reticulon-like protein OS=Glycine soja GN=glysoja_020145 PE=4 SV=1[more]
I1NFN7_SOYBN4.1e-3343.68Reticulon-like protein OS=Glycine max PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT3G18260.17.0e-2431.11 Reticulon family protein[more]
AT4G23630.11.6e-2028.98 VIRB2-interacting protein 1[more]
AT1G68230.21.8e-1935.16 Reticulon family protein[more]
AT4G11220.12.0e-1827.68 VIRB2-interacting protein 2[more]
AT2G46170.14.4e-1828.98 Reticulon family protein[more]
Match NameE-valueIdentityDescription
gi|502120705|ref|XP_004497054.1|3.1e-3444.25PREDICTED: reticulon-like protein B14 [Cicer arietinum][more]
gi|1021565600|ref|XP_016174148.1|9.2e-3442.53PREDICTED: reticulon-like protein B14 [Arachis ipaensis][more]
gi|1012244403|ref|XP_015941798.1|9.2e-3443.68PREDICTED: reticulon-like protein B14 [Arachis duranensis][more]
gi|951023123|ref|XP_014513097.1|2.0e-3344.25PREDICTED: reticulon-like protein B14 [Vigna radiata var. radiata][more]
gi|1012363950|gb|KYP75133.1|2.7e-3343.68Reticulon-like protein B9 [Cajanus cajan][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR003388Reticulon
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0016020 membrane
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh18G009980.1CmaCh18G009980.1mRNA


Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003388ReticulonPFAMPF02453Reticuloncoord: 3..154
score: 4.9
IPR003388ReticulonPROFILEPS50845RETICULONcoord: 3..183
score: 23
NoneNo IPR availableunknownCoilCoilcoord: 141..161
scor
NoneNo IPR availablePANTHERPTHR10994RETICULONcoord: 3..176
score: 9.2
NoneNo IPR availablePANTHERPTHR10994:SF85RETICULON-LIKE PROTEIN B14-RELATEDcoord: 3..176
score: 9.2

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CmaCh18G009980Cucurbita moschata (Rifu)cmacmoB402
CmaCh18G009980Cucurbita moschata (Rifu)cmacmoB391
CmaCh18G009980Cucurbita moschata (Rifu)cmacmoB420
CmaCh18G009980Cucurbita moschata (Rifu)cmacmoB426
CmaCh18G009980Wild cucumber (PI 183967)cmacpiB408
CmaCh18G009980Wild cucumber (PI 183967)cmacpiB421
CmaCh18G009980Wild cucumber (PI 183967)cmacpiB423
CmaCh18G009980Cucumber (Chinese Long) v2cmacuB404
CmaCh18G009980Cucumber (Chinese Long) v2cmacuB415
CmaCh18G009980Cucumber (Chinese Long) v2cmacuB417
CmaCh18G009980Melon (DHL92) v3.5.1cmameB350
CmaCh18G009980Melon (DHL92) v3.5.1cmameB351
CmaCh18G009980Melon (DHL92) v3.5.1cmameB370
CmaCh18G009980Watermelon (Charleston Gray)cmawcgB351
CmaCh18G009980Watermelon (Charleston Gray)cmawcgB364
CmaCh18G009980Watermelon (Charleston Gray)cmawcgB370
CmaCh18G009980Watermelon (97103) v1cmawmB372
CmaCh18G009980Watermelon (97103) v1cmawmB391
CmaCh18G009980Watermelon (97103) v1cmawmB402
CmaCh18G009980Cucurbita pepo (Zucchini)cmacpeB415
CmaCh18G009980Cucurbita pepo (Zucchini)cmacpeB422
CmaCh18G009980Cucurbita pepo (Zucchini)cmacpeB429
CmaCh18G009980Cucurbita pepo (Zucchini)cmacpeB430
CmaCh18G009980Cucurbita pepo (Zucchini)cmacpeB450
CmaCh18G009980Bottle gourd (USVL1VR-Ls)cmalsiB364
CmaCh18G009980Bottle gourd (USVL1VR-Ls)cmalsiB389
CmaCh18G009980Cucumber (Gy14) v2cgybcmaB098
CmaCh18G009980Cucumber (Gy14) v2cgybcmaB625
CmaCh18G009980Cucumber (Gy14) v2cgybcmaB626
CmaCh18G009980Melon (DHL92) v3.6.1cmamedB405
CmaCh18G009980Melon (DHL92) v3.6.1cmamedB408
CmaCh18G009980Melon (DHL92) v3.6.1cmamedB427
CmaCh18G009980Silver-seed gourdcarcmaB0833
CmaCh18G009980Silver-seed gourdcarcmaB1095
CmaCh18G009980Silver-seed gourdcarcmaB1167
CmaCh18G009980Cucumber (Chinese Long) v3cmacucB0481
CmaCh18G009980Cucumber (Chinese Long) v3cmacucB0497
CmaCh18G009980Cucumber (Chinese Long) v3cmacucB0498
CmaCh18G009980Watermelon (97103) v2cmawmbB423
CmaCh18G009980Watermelon (97103) v2cmawmbB404
CmaCh18G009980Watermelon (97103) v2cmawmbB430
CmaCh18G009980Wax gourdcmawgoB0501
CmaCh18G009980Wax gourdcmawgoB0506
CmaCh18G009980Wax gourdcmawgoB0539
CmaCh18G009980Cucurbita maxima (Rimu)cmacmaB103
CmaCh18G009980Cucurbita maxima (Rimu)cmacmaB142
CmaCh18G009980Cucurbita maxima (Rimu)cmacmaB305
CmaCh18G009980Cucurbita maxima (Rimu)cmacmaB402
CmaCh18G009980Cucurbita maxima (Rimu)cmacmaB408
CmaCh18G009980Cucumber (Gy14) v1cgycmaB0777