CmaCh18G009750 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh18G009750
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	Albugo candida WGS project CAIX00000000 data, strain Ac Nc2, contig AcNc2_CONTIG_8_length_208685
Location	Cma_Chr18 : 8245288 .. 8248027 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTCAGGTTGAAGACTGAAACTGAAGGGAAAACTCGCTTCGAGCAGACGCCCTAAAGAATGGAAGATTTTGATAAGAAGCTCTCTCTCGCTGAGCAAATGGAGGAAGACGGAAGAACCTCTGGCGATTCTAGCGGTTCCTCCAACACTCTCACTTTGCTCCGCAAGTTTCTTGAAATCCAGCAGCGTAGAGCAGAAGCTTATGCCAGGCTTAAGAGGTATCATTGATTTGATTTTCGTTTGAAATCTCGATCATTATTTTGGATAATCGATGACGAATTGATGACTTGAGTAATGTGTATGCGTATTTCTGTTATAGTTCTTGTCCTAGAACGCGATGTCGATGCATTTTCTTTCCTGTTGATTCCATATGGATCGATCATTGGAAAATCTATCTCAAAGAATTTTTGTTAGATCTAAATTAACTTAATGACAAAGTTTCGAGCGTGTTGCTGCTACTTATTTAAACAAGGCGGATTGAATTTTGCAAGTCTTCATTATTCTGTTGACTCGCAGGGGTTTCGATGAGTATATGACTTCAGGAAGGGAGATATCTTACCAACAGCTTTGCGGTGAGATCACTGCAGAATTCAGTAATTGCTCCAAACAAGTTCGTTTTGCAATTTCATAGCATTTCAGTTAGGCGTAGTCTTCTTTGAGCTTCCTTTTGAGGTTTTACTTTTTGGACTATGGACTCTCTCTTGTTGTAGGTCATTGACATTGAGTCGAACTTCTGTAGTCCAGATCATGACAGGATCGAGTTAGCCAGCCTGCTTAGATCTGTTCAAGAACAAGAAAAGCAGAAATTGCATCTGGTATGCCACCTCCAAGAAATTCTCTAGAATGCTTTGGTTATATTTTTTAAGCACCTTTTCCTTCTCTGCACTGAATAGGTTTGACGAGTAGTATTATTCCAAACCTGAAAATATATGACGTGCTTCACAGAATTCCAATTGGTCAGTTAAACTTGTAATTATAAATTTTGTAGGATCAAACAGTATATGCTTTGGAAAATTGTAATTATAAATTTTGTAGGATCAATCAGTATTTGCTTTTGAAAATAAGTCTTAAGTTTTTATCACAATGAGACAAGCCTCAAGGCGTAATAATTAAAAGACTTTTGAAACATTGTTCAGATTAGAGACATGGTCTATGGATAAATCTGGATCATGTAAAGAATTCTTACCTTCTCTTGATTCTAGAAAATTAAAGAAAGATGGCCATTTGTTTCACATATTCCTTCTAGGACTGCTACTGGCTACTAATATGACAAGCAGACCGTAGATTTTTTTAGAGAGCCTTCCATGGTTGCTACATGTAAAGTCACAAGGTTGTAACGGCCCAAGCCCATTGTTAGCAGATATTGTCCTCTTTGGGCTTTCCCTTTCGGGTTTCCTCTCAAGGTTTTTAAAACACGTATGCTAGGGAGAGGTTTCCACACTCTTATAAAGAATATTTCGTTCTCCTCTCCAACCGGTGTGGGATCTGATAGTATTTCACTATTTGTGTCTTATTGTTGATTCCTTTAGATGTGGTGCACTTTGTCTTACAACAAGGCTACTCCACCTTTGAAATTCCTTCTCAAGTTGTCTTAAAAGCTGATTAAACATCGAATGAGTAGCAGGCAATAATGTGTAGAGTGATTTCCTTTCTTGGATTAACTTTTAGAAATGCAATTCATTGAAATAAACACCAAAGTCAGCTCCATGTAGTTCAGATTCTCTTCTCTCAACCACTGCCCTTACTCCATCTCCTAAACATTACATTATTCTGGCTAGAATTCCTTTTATGATAAATAAAAAAAAGGTCACTGGAAAATTGTCTATCAAAATAGAGTTGAAGGAAAACTGTAATGTCCTTGAAAGATCTTAAATAAACATCTCTCACATCTAAGTTTCCCTTTCATTCTTCTTTCACCATTAAACTACTGAGCTCGATGATGTAAGTATTCAATCACCTGCACAAGGTCCTCAAGTAGTGATACATAGCTTATCCTTCAATGCTTTACATAGTTGTTTCATGCCATTTCCAGTGCTAAAAAACAGTACCAGAAGTTTGCTGATCATCTATTAGTTAATTAATTTGAAAGCTGAGAATGCATACAAATAAGCAAACGATGAGATAAGACACATCACCGCGTGTTTGTGTTGCGGGTGGGTTTTCTTGGACATTGAATGTGTACTTTTGCTAGATAGGAACCTCATCGTATAAAGTTCAAGAGTTGAGAGTTCCTGCCTTCATCTTTTCCTAACAATTATTCCTCTTTATAGACAGCTCAAATTCAGTTATTGAAGAAGGCTGGTCGCCCATCGGAGCGCTTGGTGAGCCACGAGAATTGCAGATTCAAGACACCTCGAGAGCACGAGTGTGTACATGTCCACGAGATAACTGAAGCTTCAGGTACCGAGGAAGCAGAAGCAGATGCCGAATATGACAATGCTCTCAAGGAAGCAATCAAAGGTGTGCAAGAGGCTGTGACGACCATTAATGAGCACATGGAGGAAGTGAGATATGAGATTGCAGCTCTTGAAGATAAGTAATCTTGTGACATATGTATATGTTAATTGGTAATATCTTGCTCTGCAATTGAATTGGTTATTGAAATGTGCCTGTAAAGATACACAGAGTTGGTTCTTTACTAACGTGCATTCGCTCAACGTAGGGATAAAGCAAAAAGTTTACATCTTCGTGTTTGCCATCTTTTACGAGATATATCAACTGAATTCTCAATTTTTTGCCCCAA

mRNA sequence

TTCAGGTTGAAGACTGAAACTGAAGGGAAAACTCGCTTCGAGCAGACGCCCTAAAGAATGGAAGATTTTGATAAGAAGCTCTCTCTCGCTGAGCAAATGGAGGAAGACGGAAGAACCTCTGGCGATTCTAGCGGTTCCTCCAACACTCTCACTTTGCTCCGCAAGTTTCTTGAAATCCAGCAGCGTAGAGCAGAAGCTTATGCCAGGCTTAAGAGGGGTTTCGATGAGTATATGACTTCAGGAAGGGAGATATCTTACCAACAGCTTTGCGGTGAGATCACTGCAGAATTCAGTAATTGCTCCAAACAAGTCATTGACATTGAGTCGAACTTCTGTAGTCCAGATCATGACAGGATCGAGTTAGCCAGCCTGCTTAGATCTGTTCAAGAACAAGAAAAGCAGAAATTGCATCTGACAGCTCAAATTCAGTTATTGAAGAAGGCTGGTCGCCCATCGGAGCGCTTGGTGAGCCACGAGAATTGCAGATTCAAGACACCTCGAGAGCACGAGTGTGTACATGTCCACGAGATAACTGAAGCTTCAGGTACCGAGGAAGCAGAAGCAGATGCCGAATATGACAATGCTCTCAAGGAAGCAATCAAAGGTGTGCAAGAGGCTGTGACGACCATTAATGAGCACATGGAGGAAGTGAGATATGAGATTGCAGCTCTTGAAGATAAGTAATCTTGTGACATATGTATATGTTAATTGGTAATATCTTGCTCTGCAATTGAATTGGTTATTGAAATGTGCCTGTAAAGATACACAGAGTTGGTTCTTTACTAACGTGCATTCGCTCAACGTAGGGATAAAGCAAAAAGTTTACATCTTCGTGTTTGCCATCTTTTACGAGATATATCAACTGAATTCTCAATTTTTTGCCCCAA

Coding sequence (CDS)

ATGGAAGATTTTGATAAGAAGCTCTCTCTCGCTGAGCAAATGGAGGAAGACGGAAGAACCTCTGGCGATTCTAGCGGTTCCTCCAACACTCTCACTTTGCTCCGCAAGTTTCTTGAAATCCAGCAGCGTAGAGCAGAAGCTTATGCCAGGCTTAAGAGGGGTTTCGATGAGTATATGACTTCAGGAAGGGAGATATCTTACCAACAGCTTTGCGGTGAGATCACTGCAGAATTCAGTAATTGCTCCAAACAAGTCATTGACATTGAGTCGAACTTCTGTAGTCCAGATCATGACAGGATCGAGTTAGCCAGCCTGCTTAGATCTGTTCAAGAACAAGAAAAGCAGAAATTGCATCTGACAGCTCAAATTCAGTTATTGAAGAAGGCTGGTCGCCCATCGGAGCGCTTGGTGAGCCACGAGAATTGCAGATTCAAGACACCTCGAGAGCACGAGTGTGTACATGTCCACGAGATAACTGAAGCTTCAGGTACCGAGGAAGCAGAAGCAGATGCCGAATATGACAATGCTCTCAAGGAAGCAATCAAAGGTGTGCAAGAGGCTGTGACGACCATTAATGAGCACATGGAGGAAGTGAGATATGAGATTGCAGCTCTTGAAGATAAGTAA

Protein sequence

MEDFDKKLSLAEQMEEDGRTSGDSSGSSNTLTLLRKFLEIQQRRAEAYARLKRGFDEYMTSGREISYQQLCGEITAEFSNCSKQVIDIESNFCSPDHDRIELASLLRSVQEQEKQKLHLTAQIQLLKKAGRPSERLVSHENCRFKTPREHECVHVHEITEASGTEEAEADAEYDNALKEAIKGVQEAVTTINEHMEEVRYEIAALEDK

Homology

[Close]

BLAST of CmaCh18G009750 vs. Swiss-Prot
Match: CS060_MOUSE (Uncharacterized protein C19orf60 homolog OS=Mus musculus PE=1 SV=1)

HSP 1 Score: 52.4 bits (124), Expect = 7.0e-06
Identity = 35/120 (29.17%), Postives = 67/120 (55.83%), Query Frame = 1


Query: 17  DGRTSGDSSGS---SNTLTLLRKFLEIQQRRAEAYARLKRGFDEYMTSGREI---SYQQL 76
           DG  S +S+ +   +   TL+++  ++Q  RA+A+ RL +   +Y+ SG+     SY+ +
Sbjct: 13  DGPGSAESAWAWRDAPIATLVQRIQQLQNERAQAFRRLDQAHRQYLLSGQHYDFPSYRSV 72

Query: 77  CGEITAEFSNCSKQVIDIESNFCSPDHDRIELASLLRSVQEQEKQKLHLTAQIQLLKKAG 131
             E+T  F+  S++V+ +E+    P    + LA  +RS+QE E+ +L   A +Q++   G
Sbjct: 73  VHEVTQAFAAASREVLAVEAELAGPRAQPV-LARHVRSLQELEQTRLATVALLQVMGTPG 131

[Close]

BLAST of CmaCh18G009750 vs. TrEMBL
Match: A0A0A0KUN3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G612270 PE=4 SV=1)

HSP 1 Score: 345.1 bits (884), Expect = 5.8e-92
Identity = 182/208 (87.50%), Postives = 192/208 (92.31%), Query Frame = 1


Query: 1   MEDFDKKLSLAEQMEEDGRTSGDSSGSSNTLTLLRKFLEIQQRRAEAYARLKRGFDEYMT 60
           MEDF+KKLSL EQMEED +T      SSNTL+LLR+FLEIQQRRAEAY++LKRGFDEYMT
Sbjct: 1   MEDFEKKLSLDEQMEEDRKTD-----SSNTLSLLRQFLEIQQRRAEAYSKLKRGFDEYMT 60

Query: 61  SGREISYQQLCGEITAEFSNCSKQVIDIESNFCSPDHDRIELASLLRSVQEQEKQKLHLT 120
           SGREISYQQLC EIT EFSNCSKQVIDIESNF S DH+R+ELA+ LRSVQEQEKQKLHLT
Sbjct: 61  SGREISYQQLCSEITTEFSNCSKQVIDIESNFRSSDHNRLELANQLRSVQEQEKQKLHLT 120

Query: 121 AQIQLLKKAGRPSERLVSHENCRFKTPREHECVHVHEITEASGTEEAEADAEYDNALKEA 180
           AQIQLLKKAGRPSERLVSHENCRF  PREHECVHVHEITEASGTEEAEADAEYDNALKEA
Sbjct: 121 AQIQLLKKAGRPSERLVSHENCRFNAPREHECVHVHEITEASGTEEAEADAEYDNALKEA 180

Query: 181 IKGVQEAVTTINEHMEEVRYEIAALEDK 209
           IKGVQ+AVTTINEHMEEVRYEI ALEDK
Sbjct: 181 IKGVQDAVTTINEHMEEVRYEIEALEDK 203

[Close]

BLAST of CmaCh18G009750 vs. TrEMBL
Match: B9HK92_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0008s01280g PE=4 SV=1)

HSP 1 Score: 300.4 bits (768), Expect = 1.6e-78
Identity = 151/206 (73.30%), Postives = 179/206 (86.89%), Query Frame = 1


Query: 1   MEDFDKKLSLAEQMEEDGRTSGDSSGSSNTLTLLRKFLEIQQRRAEAYARLKRGFDEYMT 60
           MEDF+KK SL +    +   +  SS SSNTL LLR+FLEIQ+RRA+AYA+LK+GF EYM 
Sbjct: 9   MEDFEKKASLTDTEAMETEAAASSSKSSNTLLLLRRFLEIQERRAQAYAKLKQGFSEYMV 68

Query: 61  SGREISYQQLCGEITAEFSNCSKQVIDIESNFCSPDHDRIELASLLRSVQEQEKQKLHLT 120
           SG E++YQQLC +IT EF++CSKQVI++ES F +PDHDR++LA LLR +Q QEKQKLHLT
Sbjct: 69  SGGELAYQQLCSKITEEFNDCSKQVIEMESLFLNPDHDRVDLAHLLRDIQTQEKQKLHLT 128

Query: 121 AQIQLLKKAGRPSERLVSHENCRFKTPREHECVHVHEITEASGTEEAEADAEYDNALKEA 180
           A IQLLKKAGRPSERLV+HENCRF  P EHECVH+HEITEASGTEEAEADAEYDNALKEA
Sbjct: 129 ATIQLLKKAGRPSERLVNHENCRFSRPMEHECVHLHEITEASGTEEAEADAEYDNALKEA 188

Query: 181 IKGVQEAVTTINEHMEEVRYEIAALE 207
           I+GVQ++VTTINEH+EE++YEIAALE
Sbjct: 189 IRGVQDSVTTINEHLEEIKYEIAALE 214

[Close]

BLAST of CmaCh18G009750 vs. TrEMBL
Match: A0A061FXB0_THECC (Uncharacterized protein isoform 2 OS=Theobroma cacao GN=TCM_044581 PE=4 SV=1)

HSP 1 Score: 291.2 bits (744), Expect = 1.0e-75
Identity = 152/216 (70.37%), Postives = 177/216 (81.94%), Query Frame = 1


Query: 1   MEDFDKKLSLAEQMEEDGRTSGDSSGSSNT----------LTLLRKFLEIQQRRAEAYAR 60
           MEDF+KK+S+ + ME +G   G   G  ++          L LLRKFL+IQQRRA+AYA+
Sbjct: 1   MEDFEKKVSIKDSMEIEGEEEGSGGGGCSSSSSSSKNEEILQLLRKFLDIQQRRAQAYAK 60

Query: 61  LKRGFDEYMTSGREISYQQLCGEITAEFSNCSKQVIDIESNFCSPDHDRIELASLLRSVQ 120
           LK GF EYM SG E++YQQLC EIT +F +CSKQV+++ES F SPD+ R++LA LLRSVQ
Sbjct: 61  LKTGFSEYMNSGGELAYQQLCSEITVKFKDCSKQVLEMESLFLSPDYCRVDLAQLLRSVQ 120

Query: 121 EQEKQKLHLTAQIQLLKKAGRPSERLVSHENCRFKTPREHECVHVHEITEASGTEEAEAD 180
            QEKQKLHLTA IQLLKKAGRPSERLVSHENC FK P EHECVHVHEITEASGTE+AEA+
Sbjct: 121 TQEKQKLHLTATIQLLKKAGRPSERLVSHENCLFKKPMEHECVHVHEITEASGTEDAEAN 180

Query: 181 AEYDNALKEAIKGVQEAVTTINEHMEEVRYEIAALE 207
           AEYDNALKEAI+GVQ+AVT INEH+EEVRYEIAALE
Sbjct: 181 AEYDNALKEAIRGVQDAVTAINEHLEEVRYEIAALE 216

[Close]

BLAST of CmaCh18G009750 vs. TrEMBL
Match: V4RR51_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10029282mg PE=4 SV=1)

HSP 1 Score: 288.9 bits (738), Expect = 5.0e-75
Identity = 149/207 (71.98%), Postives = 180/207 (86.96%), Query Frame = 1


Query: 1   MEDFDKKLSLAEQME-EDGRTSGDSSGSSNTLTLLRKFLEIQQRRAEAYARLKRGFDEYM 60
           M+DF+KK+++ + ME E+      ++ SS TL LLR FL+IQQRRA+AYA+LKRGF EYM
Sbjct: 1   MDDFEKKVTITDAMEMEEMDIEQANNNSSKTLQLLRTFLDIQQRRAQAYAKLKRGFSEYM 60

Query: 61  TSGREISYQQLCGEITAEFSNCSKQVIDIESNFCSPDHDRIELASLLRSVQEQEKQKLHL 120
            SG E++YQQLC EIT+EF++CSKQV++IES F +PD  R++LA LLR+VQ QEKQKLHL
Sbjct: 61  ISGGELAYQQLCSEITSEFNDCSKQVLEIESLFLNPDFCRVDLAQLLRAVQTQEKQKLHL 120

Query: 121 TAQIQLLKKAGRPSERLVSHENCRFKTPREHECVHVHEITEASGTEEAEADAEYDNALKE 180
           TA IQLLKKAGRPSERLVSHENC+F+ P++HECVHV EITEA+GTEEAEADAEYDNALKE
Sbjct: 121 TATIQLLKKAGRPSERLVSHENCKFREPKKHECVHVQEITEAAGTEEAEADAEYDNALKE 180

Query: 181 AIKGVQEAVTTINEHMEEVRYEIAALE 207
           AI+GVQ+AVT INEH+EEVRYEIAALE
Sbjct: 181 AIRGVQDAVTAINEHLEEVRYEIAALE 207

[Close]

BLAST of CmaCh18G009750 vs. TrEMBL
Match: A0A061FRB1_THECC (Uncharacterized protein isoform 1 OS=Theobroma cacao GN=TCM_044581 PE=4 SV=1)

HSP 1 Score: 287.0 bits (733), Expect = 1.9e-74
Identity = 152/217 (70.05%), Postives = 177/217 (81.57%), Query Frame = 1


Query: 1   MEDFDKKLSLAEQMEEDGRTSGDSSGSSNT----------LTLLRKFLEIQQRRAEAYAR 60
           MEDF+KK+S+ + ME +G   G   G  ++          L LLRKFL+IQQRRA+AYA+
Sbjct: 1   MEDFEKKVSIKDSMEIEGEEEGSGGGGCSSSSSSSKNEEILQLLRKFLDIQQRRAQAYAK 60

Query: 61  LKRGFDEYMTSGREISYQQLCGEITAEFSNCSKQVI-DIESNFCSPDHDRIELASLLRSV 120
           LK GF EYM SG E++YQQLC EIT +F +CSKQV+ ++ES F SPD+ R++LA LLRSV
Sbjct: 61  LKTGFSEYMNSGGELAYQQLCSEITVKFKDCSKQVVLEMESLFLSPDYCRVDLAQLLRSV 120

Query: 121 QEQEKQKLHLTAQIQLLKKAGRPSERLVSHENCRFKTPREHECVHVHEITEASGTEEAEA 180
           Q QEKQKLHLTA IQLLKKAGRPSERLVSHENC FK P EHECVHVHEITEASGTE+AEA
Sbjct: 121 QTQEKQKLHLTATIQLLKKAGRPSERLVSHENCLFKKPMEHECVHVHEITEASGTEDAEA 180

Query: 181 DAEYDNALKEAIKGVQEAVTTINEHMEEVRYEIAALE 207
           +AEYDNALKEAI+GVQ+AVT INEH+EEVRYEIAALE
Sbjct: 181 NAEYDNALKEAIRGVQDAVTAINEHLEEVRYEIAALE 217

[Close]

BLAST of CmaCh18G009750 vs. TAIR10
Match: AT5G04910.1 (AT5G04910.1 unknown protein)

HSP 1 Score: 256.1 bits (653), Expect = 1.8e-68
Identity = 137/217 (63.13%), Postives = 166/217 (76.50%), Query Frame = 1


Query: 2   EDFDKKLSLAEQMEED----------GRTSGD--SSGSSNTLTLLRKFLEIQQRRAEAYA 61
           EDF KK+SL + +  D          G TS    S  +S TL LLR  LEIQQRRA+AYA
Sbjct: 4   EDFQKKVSLRDSLSGDIENECGGSGVGSTSSTVGSGVASQTLVLLRSLLEIQQRRAQAYA 63

Query: 62  RLKRGFDEYMTSGREISYQQLCGEITAEFSNCSKQVIDIESNFCSPDHDRIELASLLRSV 121
            LK GF EY+ SG E  YQ+LC EIT EFS CSKQV ++ES F +P+  R +LA LL  +
Sbjct: 64  NLKSGFSEYVESGAEALYQKLCSEITTEFSECSKQVREMESLFLNPEVGRADLAKLLSDI 123

Query: 122 QEQEKQKLHLTAQIQLLKKAGRPSERLVSHENCRFKTPREHECVHVHEITEASGTEEAEA 181
           Q QEKQKLHLT  IQ+LKKAGRPSER+++HENC+FK P +HECVH+HEITEA+GTEEAEA
Sbjct: 124 QTQEKQKLHLTVTIQVLKKAGRPSERMLTHENCKFKKPMQHECVHLHEITEAAGTEEAEA 183

Query: 182 DAEYDNALKEAIKGVQEAVTTINEHMEEVRYEIAALE 207
           DAE+DNALKEAI+GVQ+AVT+INE++E++RYEI ALE
Sbjct: 184 DAEFDNALKEAIRGVQDAVTSINEYLEDIRYEIEALE 220

[Close]

BLAST of CmaCh18G009750 vs. NCBI nr
Match: gi|449434544|ref|XP_004135056.1| (PREDICTED: uncharacterized protein LOC101210078 [Cucumis sativus])

HSP 1 Score: 345.1 bits (884), Expect = 8.4e-92
Identity = 182/208 (87.50%), Postives = 192/208 (92.31%), Query Frame = 1


Query: 1   MEDFDKKLSLAEQMEEDGRTSGDSSGSSNTLTLLRKFLEIQQRRAEAYARLKRGFDEYMT 60
           MEDF+KKLSL EQMEED +T      SSNTL+LLR+FLEIQQRRAEAY++LKRGFDEYMT
Sbjct: 1   MEDFEKKLSLDEQMEEDRKTD-----SSNTLSLLRQFLEIQQRRAEAYSKLKRGFDEYMT 60

Query: 61  SGREISYQQLCGEITAEFSNCSKQVIDIESNFCSPDHDRIELASLLRSVQEQEKQKLHLT 120
           SGREISYQQLC EIT EFSNCSKQVIDIESNF S DH+R+ELA+ LRSVQEQEKQKLHLT
Sbjct: 61  SGREISYQQLCSEITTEFSNCSKQVIDIESNFRSSDHNRLELANQLRSVQEQEKQKLHLT 120

Query: 121 AQIQLLKKAGRPSERLVSHENCRFKTPREHECVHVHEITEASGTEEAEADAEYDNALKEA 180
           AQIQLLKKAGRPSERLVSHENCRF  PREHECVHVHEITEASGTEEAEADAEYDNALKEA
Sbjct: 121 AQIQLLKKAGRPSERLVSHENCRFNAPREHECVHVHEITEASGTEEAEADAEYDNALKEA 180

Query: 181 IKGVQEAVTTINEHMEEVRYEIAALEDK 209
           IKGVQ+AVTTINEHMEEVRYEI ALEDK
Sbjct: 181 IKGVQDAVTTINEHMEEVRYEIEALEDK 203

[Close]

BLAST of CmaCh18G009750 vs. NCBI nr
Match: gi|659091739|ref|XP_008446706.1| (PREDICTED: protein Daple [Cucumis melo])

HSP 1 Score: 341.3 bits (874), Expect = 1.2e-90
Identity = 180/208 (86.54%), Postives = 191/208 (91.83%), Query Frame = 1


Query: 1   MEDFDKKLSLAEQMEEDGRTSGDSSGSSNTLTLLRKFLEIQQRRAEAYARLKRGFDEYMT 60
           MEDF+KKLSL EQMEED  T      SSNTL+LLR+FLEIQQRRAEAY++LKRGFDEYMT
Sbjct: 1   MEDFEKKLSLDEQMEEDRGTD-----SSNTLSLLRQFLEIQQRRAEAYSKLKRGFDEYMT 60

Query: 61  SGREISYQQLCGEITAEFSNCSKQVIDIESNFCSPDHDRIELASLLRSVQEQEKQKLHLT 120
           SGREISYQQLC EIT EFSNCSKQVIDIESNF + DH+R+ELA+LLRSVQEQEKQKLHLT
Sbjct: 61  SGREISYQQLCSEITTEFSNCSKQVIDIESNFRNSDHNRLELANLLRSVQEQEKQKLHLT 120

Query: 121 AQIQLLKKAGRPSERLVSHENCRFKTPREHECVHVHEITEASGTEEAEADAEYDNALKEA 180
           AQIQLLKKAGRPSERLVSHENCR   PREHECVHVHEITEASGTEEAEADAEYDNALKEA
Sbjct: 121 AQIQLLKKAGRPSERLVSHENCRINAPREHECVHVHEITEASGTEEAEADAEYDNALKEA 180

Query: 181 IKGVQEAVTTINEHMEEVRYEIAALEDK 209
           IKGVQ+AVTTIN+HMEEVRYEI ALEDK
Sbjct: 181 IKGVQDAVTTINDHMEEVRYEIEALEDK 203

[Close]

BLAST of CmaCh18G009750 vs. NCBI nr
Match: gi|224097502|ref|XP_002310962.1| (hypothetical protein POPTR_0008s01280g [Populus trichocarpa])

HSP 1 Score: 300.4 bits (768), Expect = 2.4e-78
Identity = 151/206 (73.30%), Postives = 179/206 (86.89%), Query Frame = 1


Query: 1   MEDFDKKLSLAEQMEEDGRTSGDSSGSSNTLTLLRKFLEIQQRRAEAYARLKRGFDEYMT 60
           MEDF+KK SL +    +   +  SS SSNTL LLR+FLEIQ+RRA+AYA+LK+GF EYM 
Sbjct: 9   MEDFEKKASLTDTEAMETEAAASSSKSSNTLLLLRRFLEIQERRAQAYAKLKQGFSEYMV 68

Query: 61  SGREISYQQLCGEITAEFSNCSKQVIDIESNFCSPDHDRIELASLLRSVQEQEKQKLHLT 120
           SG E++YQQLC +IT EF++CSKQVI++ES F +PDHDR++LA LLR +Q QEKQKLHLT
Sbjct: 69  SGGELAYQQLCSKITEEFNDCSKQVIEMESLFLNPDHDRVDLAHLLRDIQTQEKQKLHLT 128

Query: 121 AQIQLLKKAGRPSERLVSHENCRFKTPREHECVHVHEITEASGTEEAEADAEYDNALKEA 180
           A IQLLKKAGRPSERLV+HENCRF  P EHECVH+HEITEASGTEEAEADAEYDNALKEA
Sbjct: 129 ATIQLLKKAGRPSERLVNHENCRFSRPMEHECVHLHEITEASGTEEAEADAEYDNALKEA 188

Query: 181 IKGVQEAVTTINEHMEEVRYEIAALE 207
           I+GVQ++VTTINEH+EE++YEIAALE
Sbjct: 189 IRGVQDSVTTINEHLEEIKYEIAALE 214

[Close]

BLAST of CmaCh18G009750 vs. NCBI nr
Match: gi|743868289|ref|XP_011032959.1| (PREDICTED: uncharacterized protein LOC105131615 [Populus euphratica])

HSP 1 Score: 299.7 bits (766), Expect = 4.0e-78
Identity = 151/206 (73.30%), Postives = 179/206 (86.89%), Query Frame = 1


Query: 1   MEDFDKKLSLAEQMEEDGRTSGDSSGSSNTLTLLRKFLEIQQRRAEAYARLKRGFDEYMT 60
           MEDF+KK SL +    +   +  SS SSN+L LLR+FLEIQQRRA+AYA+LK+GF EYM 
Sbjct: 9   MEDFEKKASLTDTEAMETEAAASSSKSSNSLLLLRRFLEIQQRRAQAYAKLKQGFSEYMV 68

Query: 61  SGREISYQQLCGEITAEFSNCSKQVIDIESNFCSPDHDRIELASLLRSVQEQEKQKLHLT 120
           SG E++YQQLC +IT EF++CSKQVI++ES F +PDHDR++LA LLR +Q QEKQKLHLT
Sbjct: 69  SGGELAYQQLCSKITEEFNDCSKQVIEMESLFLNPDHDRVDLAHLLRDIQTQEKQKLHLT 128

Query: 121 AQIQLLKKAGRPSERLVSHENCRFKTPREHECVHVHEITEASGTEEAEADAEYDNALKEA 180
           A IQLLKKAGRPSERLV+HENCRF  P EHECVH+HEITEASGTEEAEADAEYDNALKEA
Sbjct: 129 ATIQLLKKAGRPSERLVNHENCRFPKPMEHECVHLHEITEASGTEEAEADAEYDNALKEA 188

Query: 181 IKGVQEAVTTINEHMEEVRYEIAALE 207
           I+GVQ++VTTINEH+EE++YEIAALE
Sbjct: 189 IRGVQDSVTTINEHLEEIKYEIAALE 214

[Close]

BLAST of CmaCh18G009750 vs. NCBI nr
Match: gi|590567923|ref|XP_007010649.1| (Uncharacterized protein isoform 2 [Theobroma cacao])

HSP 1 Score: 291.2 bits (744), Expect = 1.4e-75
Identity = 152/216 (70.37%), Postives = 177/216 (81.94%), Query Frame = 1


Query: 1   MEDFDKKLSLAEQMEEDGRTSGDSSGSSNT----------LTLLRKFLEIQQRRAEAYAR 60
           MEDF+KK+S+ + ME +G   G   G  ++          L LLRKFL+IQQRRA+AYA+
Sbjct: 1   MEDFEKKVSIKDSMEIEGEEEGSGGGGCSSSSSSSKNEEILQLLRKFLDIQQRRAQAYAK 60

Query: 61  LKRGFDEYMTSGREISYQQLCGEITAEFSNCSKQVIDIESNFCSPDHDRIELASLLRSVQ 120
           LK GF EYM SG E++YQQLC EIT +F +CSKQV+++ES F SPD+ R++LA LLRSVQ
Sbjct: 61  LKTGFSEYMNSGGELAYQQLCSEITVKFKDCSKQVLEMESLFLSPDYCRVDLAQLLRSVQ 120

Query: 121 EQEKQKLHLTAQIQLLKKAGRPSERLVSHENCRFKTPREHECVHVHEITEASGTEEAEAD 180
            QEKQKLHLTA IQLLKKAGRPSERLVSHENC FK P EHECVHVHEITEASGTE+AEA+
Sbjct: 121 TQEKQKLHLTATIQLLKKAGRPSERLVSHENCLFKKPMEHECVHVHEITEASGTEDAEAN 180

Query: 181 AEYDNALKEAIKGVQEAVTTINEHMEEVRYEIAALE 207
           AEYDNALKEAI+GVQ+AVT INEH+EEVRYEIAALE
Sbjct: 181 AEYDNALKEAIRGVQDAVTAINEHLEEVRYEIAALE 216

The following BLAST results are available for this feature:

BLAST of CmaCh18G009750 vs. Swiss-Prot


Match Name	E-value	Identity	Description
CS060_MOUSE	7.0e-06	29.17	Uncharacterized protein C19orf60 homolog OS=Mus musculus PE=1 SV=1	[more]

BLAST of CmaCh18G009750 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KUN3_CUCSA	5.8e-92	87.50	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G612270 PE=4 SV=1	[more]
B9HK92_POPTR	1.6e-78	73.30	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0008s01280g PE=4 SV=1	[more]
A0A061FXB0_THECC	1.0e-75	70.37	Uncharacterized protein isoform 2 OS=Theobroma cacao GN=TCM_044581 PE=4 SV=1	[more]
V4RR51_9ROSI	5.0e-75	71.98	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10029282mg PE=4 SV=1	[more]
A0A061FRB1_THECC	1.9e-74	70.05	Uncharacterized protein isoform 1 OS=Theobroma cacao GN=TCM_044581 PE=4 SV=1	[more]

BLAST of CmaCh18G009750 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G04910.1	1.8e-68	63.13	unknown protein	[more]

BLAST of CmaCh18G009750 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449434544\|ref\|XP_004135056.1\|	8.4e-92	87.50	PREDICTED: uncharacterized protein LOC101210078 [Cucumis sativus]	[more]
gi\|659091739\|ref\|XP_008446706.1\|	1.2e-90	86.54	PREDICTED: protein Daple [Cucumis melo]	[more]
gi\|224097502\|ref\|XP_002310962.1\|	2.4e-78	73.30	hypothetical protein POPTR_0008s01280g [Populus trichocarpa]	[more]
gi\|743868289\|ref\|XP_011032959.1\|	4.0e-78	73.30	PREDICTED: uncharacterized protein LOC105131615 [Populus euphratica]	[more]
gi\|590567923\|ref\|XP_007010649.1\|	1.4e-75	70.37	Uncharacterized protein isoform 2 [Theobroma cacao]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006635	fatty acid beta-oxidation
biological_process	GO:0048573	photoperiodism, flowering
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh18G009750.1	CmaCh18G009750.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	unknown	Coil	Coil	coord: 102..129 scor
None	No IPR available	PANTHER	PTHR28309	FAMILY NOT NAMED	coord: 27..208 score: 9.5
None	No IPR available	PANTHER	PTHR28309:SF1	SUBFAMILY NOT NAMED	coord: 27..208 score: 9.5
None	No IPR available	PFAM	PF14966	DNA_repr_REX1B	coord: 33..127 score: 3.3

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh18G009750	Cla020453	Watermelon (97103) v1	cmawmB372
CmaCh18G009750	Csa5G612270	Cucumber (Chinese Long) v2	cmacuB417
CmaCh18G009750	MELO3C012309	Melon (DHL92) v3.5.1	cmameB351
CmaCh18G009750	ClCG05G022140	Watermelon (Charleston Gray)	cmawcgB364
CmaCh18G009750	CSPI05G25900	Wild cucumber (PI 183967)	cmacpiB423
CmaCh18G009750	CmoCh18G009780	Cucurbita moschata (Rifu)	cmacmoB406
CmaCh18G009750	Lsi04G001920	Bottle gourd (USVL1VR-Ls)	cmalsiB379
CmaCh18G009750	Cp4.1LG09g03550	Cucurbita pepo (Zucchini)	cmacpeB415
CmaCh18G009750	MELO3C012309.2	Melon (DHL92) v3.6.1	cmamedB408
CmaCh18G009750	CsaV3_5G034990	Cucumber (Chinese Long) v3	cmacucB0498
CmaCh18G009750	Cla97C05G103890	Watermelon (97103) v2	cmawmbB423
CmaCh18G009750	Bhi07G000577	Wax gourd	cmawgoB0541
CmaCh18G009750	CsGy5G025380	Cucumber (Gy14) v2	cgybcmaB626
CmaCh18G009750	Carg19020	Silver-seed gourd	carcmaB1456

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh18G009750	Silver-seed gourd	carcmaB1095
CmaCh18G009750	Silver-seed gourd	carcmaB1167
CmaCh18G009750	Cucurbita maxima (Rimu)	cmacmaB103
CmaCh18G009750	Cucurbita maxima (Rimu)	cmacmaB402
CmaCh18G009750	Cucumber (Gy14) v1	cgycmaB0797
CmaCh18G009750	Cucurbita moschata (Rifu)	cmacmoB420
CmaCh18G009750	Cucurbita pepo (Zucchini)	cmacpeB429