CmaCh18G008440 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh18G008440
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	Cilia- and flagella-associated protein 20
Location	Cma_Chr18 : 7364249 .. 7367368 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTGTATCTTCAATGTCTCTGCGGATCGAATTATTCCAATGTCGGCTCTCTTTTTTTTCCATGTTTATACGGCGTTGATATTTAAATTTATGTAGTTCGGCGCTTTGATACTGTAAATTTGAGGTTTATCGTCTAGGGTTTTGCTGGGGATTTTATGCTGTTTCTCTATTGCTTGTTTATATCAATGGAAGTTTCTGGTTTTTGATGAAAAGGAGAGAAAATATTTTATAGGGAATACGCTGCTTTTCATTTTAATATTAAGATGGTTCTGATTTCAATGCAGCTTGCGGAGTGTTGCTGATTGTCTTAAAATGTTCAAAAATACGTTTCAATCCGGATTCCTCTCTATATTATATAGCCTCGGGTATGTTTAGATGTTTCAATGTCAGTGCTTTCAGTCTGTCAAGGATTTTGTTTTTTAAATTCCAGGGGCTGATGCTTTGTTTTATTTTATGTATCCTTTTCTATAGGAGCAAACCGCTACAGATATGGGATAAAGAAGGTGAATTTGTTCATCTACGGACTGTGGTTTTTTATTTGCATTTGGTTAAAGTTTTTTTTTTTTTTTTTTTTTTTTTTTTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTAATTTTTTTTTTTTTTTTTTTTTTTTTTTGTCCGTTTGGTGTTTGAGAACTCTGCTGTGGTTTTATTGGGTGATTTGATGAAACAGTGAAGCCTAGTTGTTCACAATACCATTAAATTTAGTTGTGTTAGTTGCCAATATGAGCATAGTTTAGCCTTTAAAGCATCTACTCCGACCTCGAGTGGAGGTTCAAATTTTCTCTCCCACTTTGTTGTTCTAAAAGAAAATTCGGGGTATTGGTGTTAGTTCAAGTGGAGGTTCGAAGTTTTCCTATTAATTTTGGAATGTCATGTGGGAATTGTATGAATTGTTTTTGAGGTTTAAATCCTATTAAGTGAACAGCTTGCATCAATGAGAAGCCTTTTGTTTTCCATGTTTATTATAGCAGAAACCCTTCAATTGCTACATGTCATTTCATATTGGGTTAAAAAGGTTTTCAGTTTCTGCAATATAACTGTTCTAATAGAGAACAGGATATGGATGTTCGCTACCATTTCAATTTGTGGCCTACTTGTTTAAATAATGGGCAACGAAGAATGTTACTCTGCTAGTCTATTTAGGACTTGTATTTCGTAATTTAAAAACTTTGGGGCATGTGCCATTCGTGTTCTTGTGGTGTAGAAGTTCTTTAATGTTGTGGGACTGTCAAGTTTTTTTTGAGTATGCTAATGAAGCTAAGGCTGATATGTTGTTGATGGAAATTTCTAGTTTCTAGAGCTAAAGGAAGCATGAAATGTTACCAACTTCTAAAAGCATTTTTGTATTCTTTTTTGGCAGTTTCTAATGGCCACATCAAACGCCCTCAGGATGAAGACATCCAATCAAACGCTATTGAAATTGTTGGATCAAAACTTCAGTCTACCTATATAACATGCCCAGCGGACCCAGCTGCTACACTGGGTATAAAATTGCCATTCTTGGTTATAATCGTGAAGAATCTCAAGAAATATTTTACATTTGAGATTCAAGTTCTTGATGATAAGAATGTCAGAAGGCGCTTCCGGGCTTCTAATTTTCAAGTGTGTAAGTCTTACCTTTATTTAGCTGCTGTTACTGAAACACTTGTGCACGAATACCACACCCTCGAAAGATAACAACCATTAGATTATTGAATGGCTTTAGTTACCATTGCTTCTATATATGGATATTGTTTCCAGTGACATTTTGCTTAACAATTATATAGGAATCTGTATCCTGGGTCTCAGACAATGCTGTTGCTAATGTGATTAACTTTTTGAGAGTATGGTATAAGATGATGACAATATCCCTTCTATTATGCAGGCTATCACTAGAGTTAAGCCATATATCTGCACCATGCCTCTAAGGATGGATGAAGGGTGGAACCATATCCAATTAAATCTGGCTGACTTAACTCGGAGGGCATATGGCACAAATTATGTCGAGACATTGCGAGTTCAGGTACATGCAAACTGCCGCTTGAGGAGAATCTATTTTGCAGATCGCTTGTATTCAGAGGAGGAGCTCCCGCCAGAGTTTAAGTTGTACCTTCCTACACAGGTAATTTTTAAATCCGCGCAAACCCCTGAACCAGCATTTTGTTTCTCCATTTAATTGAATGTTTTTAGGATAAATTAGAAGTATAGTTCCTCAACTTTGATGTATTTGGGTCCTAAACTTTTAAAGTGTCTAATCAAAGTTTGTGTCTAATAAGTATTTAGACTTCAAGCTTTTGTCTAATAAGTTTTTACACTTAAATTTGTGCCTAATAAGTATTTAAACTTTTAATTTTGTGCCCGTTTTTAAAAATACGAAAGCTCAGTGACTAAATTTTCAATTTTGAAAGTTCAAAAAACAAGTAAACACAATTCTGAAAGTTGAAAAACTATATTGTAATTTAACCATTTTTTTTTCTTCTTTTCCCTCCATTATTTTCTTGCAGAAAGCTTAACAAGTTTTCTGTCGTAGCAAGCATCAGTGCATCTTGGGGATCTTGAAGTTGTAACTCTTTTCTCCACTCGAATACATCCAACCAAAAAGAAAAAAAAATGAACATCAAATGTTTTGTTCTATCTAAATTCCTGTAGAGCTTAGTGAAGTTGTGGACTTATGTGAGCTAATTGCCGCTCTCTGTTCTAAATGATAATGCAAACGTGAACAGGACTAATTAGTAACTCGTTCATGAGCTTGTTCCTGTTCTTTTGGCTGGACTGTGGGACTTAGTCTAAATCGAATGGTTGTCGGATCTCTTGACGATGTTATGGAGACTCGTGGTCGTTCGAATCCATTTTAAGAACTTGGTTCAATTGATGACTTGTAAGCATAACATTCTGTGCACTGCACTCATTAGTTTTAGTTCTGCAATTCATTGCATGTTATTGGGAGATGTTAACAACTTGAAACTATTTGCTCATACAATTACAATTAATGGG

mRNA sequence

TTGTATCTTCAATGTCTCTGCGGATCGAATTATTCCAATGTCGGCTCTCTTTTTTTTCCATGTTTATACGGCGTTGATATTTAAATTTATGTAGTTCGGCGCTTTGATACTGTAAATTTGAGGTTTATCGTCTAGGGTTTTGCTGGGGATTTTATGCTGTTTCTCTATTGCTTGTTTATATCAATGGAAGTTTCTGGTTTTTGATGAAAAGGAGAGAAAATATTTTATAGGGAATACGCTGCTTTTCATTTTAATATTAAGATGGTTCTGATTTCAATGCAGCTTGCGGAGTGTTGCTGATTGTCTTAAAATGTTCAAAAATACGTTTCAATCCGGATTCCTCTCTATATTATATAGCCTCGGGAGCAAACCGCTACAGATATGGGATAAAGAAGTTTCTAATGGCCACATCAAACGCCCTCAGGATGAAGACATCCAATCAAACGCTATTGAAATTGTTGGATCAAAACTTCAGTCTACCTATATAACATGCCCAGCGGACCCAGCTGCTACACTGGGTATAAAATTGCCATTCTTGGTTATAATCGTGAAGAATCTCAAGAAATATTTTACATTTGAGATTCAAGTTCTTGATGATAAGAATGTCAGAAGGCGCTTCCGGGCTTCTAATTTTCAAGCTATCACTAGAGTTAAGCCATATATCTGCACCATGCCTCTAAGGATGGATGAAGGGTGGAACCATATCCAATTAAATCTGGCTGACTTAACTCGGAGGGCATATGGCACAAATTATGTCGAGACATTGCGAGTTCAGGTACATGCAAACTGCCGCTTGAGGAGAATCTATTTTGCAGATCGCTTGTATTCAGAGGAGGAGCTCCCGCCAGAGTTTAAGTTGTACCTTCCTACACAGAAAGCTTAACAAGTTTTCTGTCGTAGCAAGCATCAGTGCATCTTGGGGATCTTGAAGTTGTAACTCTTTTCTCCACTCGAATACATCCAACCAAAAAGAAAAAAAAATGAACATCAAATGTTTTGTTCTATCTAAATTCCTGTAGAGCTTAGTGAAGTTGTGGACTTATGTGAGCTAATTGCCGCTCTCTGTTCTAAATGATAATGCAAACGTGAACAGGACTAATTAGTAACTCGTTCATGAGCTTGTTCCTGTTCTTTTGGCTGGACTGTGGGACTTAGTCTAAATCGAATGGTTGTCGGATCTCTTGACGATGTTATGGAGACTCGTGGTCGTTCGAATCCATTTTAAGAACTTGGTTCAATTGATGACTTGTAAGCATAACATTCTGTGCACTGCACTCATTAGTTTTAGTTCTGCAATTCATTGCATGTTATTGGGAGATGTTAACAACTTGAAACTATTTGCTCATACAATTACAATTAATGGG

Coding sequence (CDS)

ATGTTCAAAAATACGTTTCAATCCGGATTCCTCTCTATATTATATAGCCTCGGGAGCAAACCGCTACAGATATGGGATAAAGAAGTTTCTAATGGCCACATCAAACGCCCTCAGGATGAAGACATCCAATCAAACGCTATTGAAATTGTTGGATCAAAACTTCAGTCTACCTATATAACATGCCCAGCGGACCCAGCTGCTACACTGGGTATAAAATTGCCATTCTTGGTTATAATCGTGAAGAATCTCAAGAAATATTTTACATTTGAGATTCAAGTTCTTGATGATAAGAATGTCAGAAGGCGCTTCCGGGCTTCTAATTTTCAAGCTATCACTAGAGTTAAGCCATATATCTGCACCATGCCTCTAAGGATGGATGAAGGGTGGAACCATATCCAATTAAATCTGGCTGACTTAACTCGGAGGGCATATGGCACAAATTATGTCGAGACATTGCGAGTTCAGGTACATGCAAACTGCCGCTTGAGGAGAATCTATTTTGCAGATCGCTTGTATTCAGAGGAGGAGCTCCCGCCAGAGTTTAAGTTGTACCTTCCTACACAGAAAGCTTAA

Protein sequence

MFKNTFQSGFLSILYSLGSKPLQIWDKEVSNGHIKRPQDEDIQSNAIEIVGSKLQSTYITCPADPAATLGIKLPFLVIIVKNLKKYFTFEIQVLDDKNVRRRFRASNFQAITRVKPYICTMPLRMDEGWNHIQLNLADLTRRAYGTNYVETLRVQVHANCRLRRIYFADRLYSEEELPPEFKLYLPTQKA

Homology

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BLAST of CmaCh18G008440 vs. Swiss-Prot
Match: CFA20_DROME (Cilia- and flagella-associated protein 20 OS=Drosophila melanogaster GN=Bug22 PE=2 SV=1)

HSP 1 Score: 327.8 bits (839), Expect = 7.9e-89
Identity = 150/189 (79.37%), Postives = 174/189 (92.06%), Query Frame = 1


Query: 1   MFKNTFQSGFLSILYSLGSKPLQIWDKEVSNGHIKRPQDEDIQSNAIEIVGSKLQSTYIT 60
           MFKNTFQSGFLSILYS+GSKPLQ+WDK+V NGHIKR  D DIQS  +EIVG+ + +T+IT
Sbjct: 1   MFKNTFQSGFLSILYSIGSKPLQLWDKKVRNGHIKRITDNDIQSLVLEIVGTNVSTTFIT 60

Query: 61  CPADPAATLGIKLPFLVIIVKNLKKYFTFEIQVLDDKNVRRRFRASNFQAITRVKPYICT 120
           CPADP  TLGIKLPFLV+I+KN+KKYFTFE+QVLDDKNVRRRFRASN+Q+ TRVKP+ICT
Sbjct: 61  CPADPKKTLGIKLPFLVMIIKNMKKYFTFEVQVLDDKNVRRRFRASNYQSTTRVKPFICT 120

Query: 121 MPLRMDEGWNHIQLNLADLTRRAYGTNYVETLRVQVHANCRLRRIYFADRLYSEEELPPE 180
           MP+R+DEGWN IQ NL+D TRRAYGTNYVETLRVQ+HANCR+RR+YF+DRLYSE+ELPPE
Sbjct: 121 MPMRLDEGWNQIQFNLSDFTRRAYGTNYVETLRVQIHANCRIRRVYFSDRLYSEDELPPE 180

Query: 181 FKLYLPTQK 190
           FKL+LP QK
Sbjct: 181 FKLFLPIQK 189

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BLAST of CmaCh18G008440 vs. Swiss-Prot
Match: CFA20_PARTE (Cilia- and flagella-associated protein 20 OS=Paramecium tetraurelia GN=CFAP20 PE=3 SV=1)

HSP 1 Score: 325.1 bits (832), Expect = 5.1e-88
Identity = 148/189 (78.31%), Postives = 174/189 (92.06%), Query Frame = 1


Query: 1   MFKNTFQSGFLSILYSLGSKPLQIWDKEVSNGHIKRPQDEDIQSNAIEIVGSKLQSTYIT 60
           MFKN+FQSGFLSILYS+GSKPLQIWDK++ NGHIKR  D+DIQS+ +EI+G+ + + +IT
Sbjct: 1   MFKNSFQSGFLSILYSIGSKPLQIWDKQIKNGHIKRITDQDIQSSVLEIMGTNVSTNFIT 60

Query: 61  CPADPAATLGIKLPFLVIIVKNLKKYFTFEIQVLDDKNVRRRFRASNFQAITRVKPYICT 120
            PADP  TLGIKLPFLV+I+KNLKKYFTFE+QVLDDKNVRRRFRASN+Q+ TRVKP+ICT
Sbjct: 61  APADPKETLGIKLPFLVMIIKNLKKYFTFEVQVLDDKNVRRRFRASNYQSTTRVKPFICT 120

Query: 121 MPLRMDEGWNHIQLNLADLTRRAYGTNYVETLRVQVHANCRLRRIYFADRLYSEEELPPE 180
           MP+R+DEGWN IQ NL+D TRRAYGTNY+ETLRVQ+HANCR+RRIYF+DRLYSEEELPPE
Sbjct: 121 MPMRLDEGWNQIQFNLSDFTRRAYGTNYIETLRVQIHANCRIRRIYFSDRLYSEEELPPE 180

Query: 181 FKLYLPTQK 190
           FKL+LP QK
Sbjct: 181 FKLFLPIQK 189

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BLAST of CmaCh18G008440 vs. Swiss-Prot
Match: CFA20_BOVIN (Cilia- and flagella-associated protein 20 OS=Bos taurus GN=CFAP20 PE=2 SV=1)

HSP 1 Score: 323.9 bits (829), Expect = 1.1e-87
Identity = 149/188 (79.26%), Postives = 171/188 (90.96%), Query Frame = 1


Query: 1   MFKNTFQSGFLSILYSLGSKPLQIWDKEVSNGHIKRPQDEDIQSNAIEIVGSKLQSTYIT 60
           MFKNTFQSGFLSILYS+GSKPLQIWDK+V NGHIKR  D DIQS  +EI G+ + +TYIT
Sbjct: 1   MFKNTFQSGFLSILYSIGSKPLQIWDKKVRNGHIKRITDNDIQSLVLEIEGTNVSTTYIT 60

Query: 61  CPADPAATLGIKLPFLVIIVKNLKKYFTFEIQVLDDKNVRRRFRASNFQAITRVKPYICT 120
           CPADP  TLGIKLPFLV+I+KNLKKYFTFE+QVLDDKNVRRRFRASN+Q+ TRVKP+ICT
Sbjct: 61  CPADPKKTLGIKLPFLVMIIKNLKKYFTFEVQVLDDKNVRRRFRASNYQSTTRVKPFICT 120

Query: 121 MPLRMDEGWNHIQLNLADLTRRAYGTNYVETLRVQVHANCRLRRIYFADRLYSEEELPPE 180
           MP+R+D+GWN IQ NL+D TRRAYGTNY+ETLRVQ+HANCR+RR+YF+DRLYSE+ELP E
Sbjct: 121 MPMRLDDGWNQIQFNLSDFTRRAYGTNYIETLRVQIHANCRIRRVYFSDRLYSEDELPAE 180

Query: 181 FKLYLPTQ 189
           FKLYLP Q
Sbjct: 181 FKLYLPVQ 188

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BLAST of CmaCh18G008440 vs. Swiss-Prot
Match: CFA20_MOUSE (Cilia- and flagella-associated protein 20 OS=Mus musculus GN=Cfap20 PE=1 SV=1)

HSP 1 Score: 323.9 bits (829), Expect = 1.1e-87
Identity = 149/188 (79.26%), Postives = 171/188 (90.96%), Query Frame = 1


Query: 1   MFKNTFQSGFLSILYSLGSKPLQIWDKEVSNGHIKRPQDEDIQSNAIEIVGSKLQSTYIT 60
           MFKNTFQSGFLSILYS+GSKPLQIWDK+V NGHIKR  D DIQS  +EI G+ + +TYIT
Sbjct: 1   MFKNTFQSGFLSILYSIGSKPLQIWDKKVRNGHIKRITDNDIQSLVLEIEGTNVSTTYIT 60

Query: 61  CPADPAATLGIKLPFLVIIVKNLKKYFTFEIQVLDDKNVRRRFRASNFQAITRVKPYICT 120
           CPADP  TLGIKLPFLV+I+KNLKKYFTFE+QVLDDKNVRRRFRASN+Q+ TRVKP+ICT
Sbjct: 61  CPADPKKTLGIKLPFLVMIIKNLKKYFTFEVQVLDDKNVRRRFRASNYQSTTRVKPFICT 120

Query: 121 MPLRMDEGWNHIQLNLADLTRRAYGTNYVETLRVQVHANCRLRRIYFADRLYSEEELPPE 180
           MP+R+D+GWN IQ NL+D TRRAYGTNY+ETLRVQ+HANCR+RR+YF+DRLYSE+ELP E
Sbjct: 121 MPMRLDDGWNQIQFNLSDFTRRAYGTNYIETLRVQIHANCRIRRVYFSDRLYSEDELPAE 180

Query: 181 FKLYLPTQ 189
           FKLYLP Q
Sbjct: 181 FKLYLPVQ 188

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BLAST of CmaCh18G008440 vs. Swiss-Prot
Match: CFA20_CHICK (Cilia- and flagella-associated protein 20 OS=Gallus gallus GN=CFAP20 PE=2 SV=1)

HSP 1 Score: 323.6 bits (828), Expect = 1.5e-87
Identity = 148/188 (78.72%), Postives = 171/188 (90.96%), Query Frame = 1


Query: 1   MFKNTFQSGFLSILYSLGSKPLQIWDKEVSNGHIKRPQDEDIQSNAIEIVGSKLQSTYIT 60
           MFKNTFQSGFLS+LYS+GSKPLQIWDK+V NGHIKR  D DIQS  +EI G+ + +TYIT
Sbjct: 1   MFKNTFQSGFLSVLYSIGSKPLQIWDKKVRNGHIKRITDNDIQSLVLEIEGTNVSTTYIT 60

Query: 61  CPADPAATLGIKLPFLVIIVKNLKKYFTFEIQVLDDKNVRRRFRASNFQAITRVKPYICT 120
           CPADP  TLGIKLPFLV+I+KNLKKYFTFE+QVLDDKNVRRRFRASN+Q+ TRVKP+ICT
Sbjct: 61  CPADPKKTLGIKLPFLVMIIKNLKKYFTFEVQVLDDKNVRRRFRASNYQSTTRVKPFICT 120

Query: 121 MPLRMDEGWNHIQLNLADLTRRAYGTNYVETLRVQVHANCRLRRIYFADRLYSEEELPPE 180
           MP+R+D+GWN IQ NL+D TRRAYGTNY+ETLRVQ+HANCR+RR+YF+DRLYSE+ELP E
Sbjct: 121 MPMRLDDGWNQIQFNLSDFTRRAYGTNYIETLRVQIHANCRIRRVYFSDRLYSEDELPAE 180

Query: 181 FKLYLPTQ 189
           FKLYLP Q
Sbjct: 181 FKLYLPVQ 188

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BLAST of CmaCh18G008440 vs. TrEMBL
Match: A0A067KZY9_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_24562 PE=4 SV=1)

HSP 1 Score: 367.5 bits (942), Expect = 1.0e-98
Identity = 177/190 (93.16%), Postives = 183/190 (96.32%), Query Frame = 1


Query: 1   MFKNTFQSGFLSILYSLGSKPLQIWDKEVSNGHIKRPQDEDIQSNAIEIVGSKLQSTYIT 60
           MFKNTFQSGFLSILYSLGSKPLQIWDKEVSNGH+KRP DEDIQSN +EIVGS +QSTYIT
Sbjct: 1   MFKNTFQSGFLSILYSLGSKPLQIWDKEVSNGHVKRPHDEDIQSNVLEIVGSNIQSTYIT 60

Query: 61  CPADPAATLGIKLPFLVIIVKNLKKYFTFEIQVLDDKNVRRRFRASNFQAITRVKPYICT 120
           CP DPAATLGIKLPFLV+IVKNLKKYFTFEIQVLDDKNVRRRFRASNFQAITRVKPYICT
Sbjct: 61  CPVDPAATLGIKLPFLVMIVKNLKKYFTFEIQVLDDKNVRRRFRASNFQAITRVKPYICT 120

Query: 121 MPLRMDEGWNHIQLNLADLTRRAYGTNYVETLRVQVHANCRLRRIYFADRLYSEEELPPE 180
           MPL+MDEGWN IQLNLAD TRRAYGTNYVETLRVQVHANCRLRRIYF+DRLYSEEELPPE
Sbjct: 121 MPLKMDEGWNQIQLNLADFTRRAYGTNYVETLRVQVHANCRLRRIYFSDRLYSEEELPPE 180

Query: 181 FKLYLPTQKA 191
           FKLYLP QKA
Sbjct: 181 FKLYLPMQKA 190

[Close]

BLAST of CmaCh18G008440 vs. TrEMBL
Match: A0A059C9Q0_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_E03953 PE=4 SV=1)

HSP 1 Score: 365.2 bits (936), Expect = 5.0e-98
Identity = 174/190 (91.58%), Postives = 184/190 (96.84%), Query Frame = 1


Query: 1   MFKNTFQSGFLSILYSLGSKPLQIWDKEVSNGHIKRPQDEDIQSNAIEIVGSKLQSTYIT 60
           MFKNTFQSGFLSILYSLGSKPLQIWDKEV NGH+KRPQDEDIQSN +E+VGS +QSTYIT
Sbjct: 1   MFKNTFQSGFLSILYSLGSKPLQIWDKEVVNGHVKRPQDEDIQSNVLEVVGSNVQSTYIT 60

Query: 61  CPADPAATLGIKLPFLVIIVKNLKKYFTFEIQVLDDKNVRRRFRASNFQAITRVKPYICT 120
           CPADPAATLGIKLPFLV+IVKNLKKYFTFEIQVLDDKNVRRRFRASNFQA+TRVKPYICT
Sbjct: 61  CPADPAATLGIKLPFLVMIVKNLKKYFTFEIQVLDDKNVRRRFRASNFQAVTRVKPYICT 120

Query: 121 MPLRMDEGWNHIQLNLADLTRRAYGTNYVETLRVQVHANCRLRRIYFADRLYSEEELPPE 180
           MPL++DEGWN IQLNL DLTRRAYGTNYVETLRVQVHANCRLRRIYF+DRLYSEEELPPE
Sbjct: 121 MPLKLDEGWNQIQLNLTDLTRRAYGTNYVETLRVQVHANCRLRRIYFSDRLYSEEELPPE 180

Query: 181 FKLYLPTQKA 191
           FKLYLP QK+
Sbjct: 181 FKLYLPMQKS 190

[Close]

BLAST of CmaCh18G008440 vs. TrEMBL
Match: A0A0K9RIN2_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_067550 PE=4 SV=1)

HSP 1 Score: 365.2 bits (936), Expect = 5.0e-98
Identity = 174/190 (91.58%), Postives = 184/190 (96.84%), Query Frame = 1


Query: 1   MFKNTFQSGFLSILYSLGSKPLQIWDKEVSNGHIKRPQDEDIQSNAIEIVGSKLQSTYIT 60
           MFKNTFQSGFLSILYSLGSKPLQIWDKEVSNGHIKRP DEDIQSN +EIVGS +QSTYIT
Sbjct: 1   MFKNTFQSGFLSILYSLGSKPLQIWDKEVSNGHIKRPMDEDIQSNVLEIVGSNIQSTYIT 60

Query: 61  CPADPAATLGIKLPFLVIIVKNLKKYFTFEIQVLDDKNVRRRFRASNFQAITRVKPYICT 120
           CPADPAATLGIKLPFLVIIVKNLKKYFTFEIQ+LDDKNVRRRFRASN+QA+TRVKPYICT
Sbjct: 61  CPADPAATLGIKLPFLVIIVKNLKKYFTFEIQILDDKNVRRRFRASNYQAVTRVKPYICT 120

Query: 121 MPLRMDEGWNHIQLNLADLTRRAYGTNYVETLRVQVHANCRLRRIYFADRLYSEEELPPE 180
           MPL++DEGWN IQLNLAD T+RAYGTNYVETLRVQVHANCRLRRIYF+DRLYSEEELPPE
Sbjct: 121 MPLKLDEGWNQIQLNLADFTKRAYGTNYVETLRVQVHANCRLRRIYFSDRLYSEEELPPE 180

Query: 181 FKLYLPTQKA 191
           FKLYLP QK+
Sbjct: 181 FKLYLPMQKS 190

[Close]

BLAST of CmaCh18G008440 vs. TrEMBL
Match: W9QXN2_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_016435 PE=4 SV=1)

HSP 1 Score: 363.6 bits (932), Expect = 1.4e-97
Identity = 173/190 (91.05%), Postives = 183/190 (96.32%), Query Frame = 1


Query: 1   MFKNTFQSGFLSILYSLGSKPLQIWDKEVSNGHIKRPQDEDIQSNAIEIVGSKLQSTYIT 60
           MFKNTFQSGFLSILYSLGSKPLQIWDKEV+NGH+KRPQDEDIQSN +EIVGS +QSTYIT
Sbjct: 1   MFKNTFQSGFLSILYSLGSKPLQIWDKEVANGHVKRPQDEDIQSNVLEIVGSNIQSTYIT 60

Query: 61  CPADPAATLGIKLPFLVIIVKNLKKYFTFEIQVLDDKNVRRRFRASNFQAITRVKPYICT 120
           CPADPAATLGIKLPFLV+IVKNLKKYFTFEIQVLDDKNVRRRFR+SNFQA+TRVKPYICT
Sbjct: 61  CPADPAATLGIKLPFLVMIVKNLKKYFTFEIQVLDDKNVRRRFRSSNFQAVTRVKPYICT 120

Query: 121 MPLRMDEGWNHIQLNLADLTRRAYGTNYVETLRVQVHANCRLRRIYFADRLYSEEELPPE 180
           MPL+MDEGWN IQ NLAD TRRAYGTNYVETLRVQVHANCRLRRIYF+DRLYSEEELPPE
Sbjct: 121 MPLKMDEGWNQIQFNLADFTRRAYGTNYVETLRVQVHANCRLRRIYFSDRLYSEEELPPE 180

Query: 181 FKLYLPTQKA 191
           FKLYLP Q +
Sbjct: 181 FKLYLPMQSS 190

[Close]

BLAST of CmaCh18G008440 vs. TrEMBL
Match: M5XRG3_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011944mg PE=4 SV=1)

HSP 1 Score: 363.2 bits (931), Expect = 1.9e-97
Identity = 174/190 (91.58%), Postives = 182/190 (95.79%), Query Frame = 1


Query: 1   MFKNTFQSGFLSILYSLGSKPLQIWDKEVSNGHIKRPQDEDIQSNAIEIVGSKLQSTYIT 60
           MFKNTFQSGFLSILYSLGSKPLQIWDKEV +GHIKRPQDEDIQSN +EI+G+ +QSTYIT
Sbjct: 1   MFKNTFQSGFLSILYSLGSKPLQIWDKEVVDGHIKRPQDEDIQSNVLEIIGTNIQSTYIT 60

Query: 61  CPADPAATLGIKLPFLVIIVKNLKKYFTFEIQVLDDKNVRRRFRASNFQAITRVKPYICT 120
           CPADP ATLGIKLPFLV+IVKNLKKYFTFEIQVLDDKNVRRRFRASNFQA+TRVKPYICT
Sbjct: 61  CPADPTATLGIKLPFLVMIVKNLKKYFTFEIQVLDDKNVRRRFRASNFQAVTRVKPYICT 120

Query: 121 MPLRMDEGWNHIQLNLADLTRRAYGTNYVETLRVQVHANCRLRRIYFADRLYSEEELPPE 180
           MPLRMDEGWN IQ NLAD TRRAYGTNYVETLRVQVHANCRLRRIYF+DRLYSEEELPPE
Sbjct: 121 MPLRMDEGWNQIQFNLADFTRRAYGTNYVETLRVQVHANCRLRRIYFSDRLYSEEELPPE 180

Query: 181 FKLYLPTQKA 191
           FKLYLP QKA
Sbjct: 181 FKLYLPMQKA 190

[Close]

BLAST of CmaCh18G008440 vs. TAIR10
Match: AT3G12300.1 (AT3G12300.1 unknown protein)

HSP 1 Score: 350.5 bits (898), Expect = 6.4e-97
Identity = 165/190 (86.84%), Postives = 181/190 (95.26%), Query Frame = 1


Query: 1   MFKNTFQSGFLSILYSLGSKPLQIWDKEVSNGHIKRPQDEDIQSNAIEIVGSKLQSTYIT 60
           MFKNTFQSGFLSILYSLGSKPLQIWDKEV +GH+KR  D+DIQSN +E+VGS +QSTYIT
Sbjct: 1   MFKNTFQSGFLSILYSLGSKPLQIWDKEVVDGHVKRCHDDDIQSNVLEVVGSNIQSTYIT 60

Query: 61  CPADPAATLGIKLPFLVIIVKNLKKYFTFEIQVLDDKNVRRRFRASNFQAITRVKPYICT 120
           CPAD +ATLGIKLPFLV++VK++KKYF+FEIQ+LDDKNVRRRFRASNFQA+TRVKPYICT
Sbjct: 61  CPADLSATLGIKLPFLVLVVKDMKKYFSFEIQILDDKNVRRRFRASNFQAVTRVKPYICT 120

Query: 121 MPLRMDEGWNHIQLNLADLTRRAYGTNYVETLRVQVHANCRLRRIYFADRLYSEEELPPE 180
           MPL+MDEGWN IQLNLADLTRRAYGTNY ETLRVQ+HANCRLRRIYFADRLYSEEELPPE
Sbjct: 121 MPLKMDEGWNQIQLNLADLTRRAYGTNYAETLRVQIHANCRLRRIYFADRLYSEEELPPE 180

Query: 181 FKLYLPTQKA 191
           FKLYLP QKA
Sbjct: 181 FKLYLPVQKA 190

[Close]

BLAST of CmaCh18G008440 vs. NCBI nr
Match: gi|449449252|ref|XP_004142379.1| (PREDICTED: cilia- and flagella-associated protein 20 isoform X2 [Cucumis sativus])

HSP 1 Score: 375.2 bits (962), Expect = 6.9e-101
Identity = 181/190 (95.26%), Postives = 187/190 (98.42%), Query Frame = 1


Query: 1   MFKNTFQSGFLSILYSLGSKPLQIWDKEVSNGHIKRPQDEDIQSNAIEIVGSKLQSTYIT 60
           MFKNTFQSGFLSIL+SLGSKPLQIWDKEVSNGHIKRPQDEDIQSN +EIVGSK+Q+TYIT
Sbjct: 1   MFKNTFQSGFLSILFSLGSKPLQIWDKEVSNGHIKRPQDEDIQSNVLEIVGSKIQATYIT 60

Query: 61  CPADPAATLGIKLPFLVIIVKNLKKYFTFEIQVLDDKNVRRRFRASNFQAITRVKPYICT 120
           CPADPA+TLGIKLPFLVIIVKNL KYFTFEIQVLDDKNVRRRFRASNFQAITRVKPYICT
Sbjct: 61  CPADPASTLGIKLPFLVIIVKNLNKYFTFEIQVLDDKNVRRRFRASNFQAITRVKPYICT 120

Query: 121 MPLRMDEGWNHIQLNLADLTRRAYGTNYVETLRVQVHANCRLRRIYFADRLYSEEELPPE 180
           MPLRMDEGWNHIQLNLAD TRRAYGTNYVETLRVQVHANCRLRRIYFADRLYSEEELPPE
Sbjct: 121 MPLRMDEGWNHIQLNLADFTRRAYGTNYVETLRVQVHANCRLRRIYFADRLYSEEELPPE 180

Query: 181 FKLYLPTQKA 191
           FKLYLPTQ+A
Sbjct: 181 FKLYLPTQRA 190

[Close]

BLAST of CmaCh18G008440 vs. NCBI nr
Match: gi|778706935|ref|XP_011655943.1| (PREDICTED: cilia- and flagella-associated protein 20 isoform X1 [Cucumis sativus])

HSP 1 Score: 368.2 bits (944), Expect = 8.4e-99
Identity = 181/197 (91.88%), Postives = 187/197 (94.92%), Query Frame = 1


Query: 1   MFKNTFQSGFLSILYSLGSKPLQIWDKE-------VSNGHIKRPQDEDIQSNAIEIVGSK 60
           MFKNTFQSGFLSIL+SLGSKPLQIWDKE       VSNGHIKRPQDEDIQSN +EIVGSK
Sbjct: 1   MFKNTFQSGFLSILFSLGSKPLQIWDKEGECFRYRVSNGHIKRPQDEDIQSNVLEIVGSK 60

Query: 61  LQSTYITCPADPAATLGIKLPFLVIIVKNLKKYFTFEIQVLDDKNVRRRFRASNFQAITR 120
           +Q+TYITCPADPA+TLGIKLPFLVIIVKNL KYFTFEIQVLDDKNVRRRFRASNFQAITR
Sbjct: 61  IQATYITCPADPASTLGIKLPFLVIIVKNLNKYFTFEIQVLDDKNVRRRFRASNFQAITR 120

Query: 121 VKPYICTMPLRMDEGWNHIQLNLADLTRRAYGTNYVETLRVQVHANCRLRRIYFADRLYS 180
           VKPYICTMPLRMDEGWNHIQLNLAD TRRAYGTNYVETLRVQVHANCRLRRIYFADRLYS
Sbjct: 121 VKPYICTMPLRMDEGWNHIQLNLADFTRRAYGTNYVETLRVQVHANCRLRRIYFADRLYS 180

Query: 181 EEELPPEFKLYLPTQKA 191
           EEELPPEFKLYLPTQ+A
Sbjct: 181 EEELPPEFKLYLPTQRA 197

[Close]

BLAST of CmaCh18G008440 vs. NCBI nr
Match: gi|659092267|ref|XP_008446984.1| (PREDICTED: UPF0468 protein C16orf80 homolog isoform X1 [Cucumis melo])

HSP 1 Score: 368.2 bits (944), Expect = 8.4e-99
Identity = 181/197 (91.88%), Postives = 187/197 (94.92%), Query Frame = 1


Query: 1   MFKNTFQSGFLSILYSLGSKPLQIWDKE-------VSNGHIKRPQDEDIQSNAIEIVGSK 60
           MFKNTFQSGFLSIL+SLGSKPLQIWDKE       VSNGHIKRPQDEDIQSN +EIVGSK
Sbjct: 1   MFKNTFQSGFLSILFSLGSKPLQIWDKEGEYFRYRVSNGHIKRPQDEDIQSNVLEIVGSK 60

Query: 61  LQSTYITCPADPAATLGIKLPFLVIIVKNLKKYFTFEIQVLDDKNVRRRFRASNFQAITR 120
           +Q+TYITCPADPA+TLGIKLPFLVIIVKNL KYFTFEIQVLDDKNVRRRFRASNFQAITR
Sbjct: 61  IQATYITCPADPASTLGIKLPFLVIIVKNLNKYFTFEIQVLDDKNVRRRFRASNFQAITR 120

Query: 121 VKPYICTMPLRMDEGWNHIQLNLADLTRRAYGTNYVETLRVQVHANCRLRRIYFADRLYS 180
           VKPYICTMPLRMDEGWNHIQLNLAD TRRAYGTNYVETLRVQVHANCRLRRIYFADRLYS
Sbjct: 121 VKPYICTMPLRMDEGWNHIQLNLADFTRRAYGTNYVETLRVQVHANCRLRRIYFADRLYS 180

Query: 181 EEELPPEFKLYLPTQKA 191
           EEELPPEFKLYLPTQ+A
Sbjct: 181 EEELPPEFKLYLPTQRA 197

[Close]

BLAST of CmaCh18G008440 vs. NCBI nr
Match: gi|802574207|ref|XP_012068715.1| (PREDICTED: cilia- and flagella-associated protein 20 [Jatropha curcas])

HSP 1 Score: 367.5 bits (942), Expect = 1.4e-98
Identity = 177/190 (93.16%), Postives = 183/190 (96.32%), Query Frame = 1


Query: 1   MFKNTFQSGFLSILYSLGSKPLQIWDKEVSNGHIKRPQDEDIQSNAIEIVGSKLQSTYIT 60
           MFKNTFQSGFLSILYSLGSKPLQIWDKEVSNGH+KRP DEDIQSN +EIVGS +QSTYIT
Sbjct: 1   MFKNTFQSGFLSILYSLGSKPLQIWDKEVSNGHVKRPHDEDIQSNVLEIVGSNIQSTYIT 60

Query: 61  CPADPAATLGIKLPFLVIIVKNLKKYFTFEIQVLDDKNVRRRFRASNFQAITRVKPYICT 120
           CP DPAATLGIKLPFLV+IVKNLKKYFTFEIQVLDDKNVRRRFRASNFQAITRVKPYICT
Sbjct: 61  CPVDPAATLGIKLPFLVMIVKNLKKYFTFEIQVLDDKNVRRRFRASNFQAITRVKPYICT 120

Query: 121 MPLRMDEGWNHIQLNLADLTRRAYGTNYVETLRVQVHANCRLRRIYFADRLYSEEELPPE 180
           MPL+MDEGWN IQLNLAD TRRAYGTNYVETLRVQVHANCRLRRIYF+DRLYSEEELPPE
Sbjct: 121 MPLKMDEGWNQIQLNLADFTRRAYGTNYVETLRVQVHANCRLRRIYFSDRLYSEEELPPE 180

Query: 181 FKLYLPTQKA 191
           FKLYLP QKA
Sbjct: 181 FKLYLPMQKA 190

[Close]

BLAST of CmaCh18G008440 vs. NCBI nr
Match: gi|1012264684|ref|XP_015947049.1| (PREDICTED: cilia- and flagella-associated protein 20 [Arachis duranensis])

HSP 1 Score: 365.9 bits (938), Expect = 4.2e-98
Identity = 175/190 (92.11%), Postives = 184/190 (96.84%), Query Frame = 1


Query: 1   MFKNTFQSGFLSILYSLGSKPLQIWDKEVSNGHIKRPQDEDIQSNAIEIVGSKLQSTYIT 60
           MFKNTFQSGFLSILYSLGSKPLQIWDKEV NGHIKRPQDEDIQSN +EIVGS +QSTYIT
Sbjct: 1   MFKNTFQSGFLSILYSLGSKPLQIWDKEVVNGHIKRPQDEDIQSNVLEIVGSNIQSTYIT 60

Query: 61  CPADPAATLGIKLPFLVIIVKNLKKYFTFEIQVLDDKNVRRRFRASNFQAITRVKPYICT 120
           CPADPAATLGIKLPFLV+IVKNLKKYFTFEIQ+LDDKNVRRRFRASNFQA+TRVKPYICT
Sbjct: 61  CPADPAATLGIKLPFLVMIVKNLKKYFTFEIQILDDKNVRRRFRASNFQAVTRVKPYICT 120

Query: 121 MPLRMDEGWNHIQLNLADLTRRAYGTNYVETLRVQVHANCRLRRIYFADRLYSEEELPPE 180
           MPLRMD+GWN IQLNLAD T+RAYGTNY+ETLRVQVHANCRLRRIYF+DRLYSEEELPPE
Sbjct: 121 MPLRMDDGWNQIQLNLADFTKRAYGTNYMETLRVQVHANCRLRRIYFSDRLYSEEELPPE 180

Query: 181 FKLYLPTQKA 191
           FKLYLP QKA
Sbjct: 181 FKLYLPMQKA 190

The following BLAST results are available for this feature:

BLAST of CmaCh18G008440 vs. Swiss-Prot


Match Name	E-value	Identity	Description
CFA20_DROME	7.9e-89	79.37	Cilia- and flagella-associated protein 20 OS=Drosophila melanogaster GN=Bug22 PE...	[more]
CFA20_PARTE	5.1e-88	78.31	Cilia- and flagella-associated protein 20 OS=Paramecium tetraurelia GN=CFAP20 PE...	[more]
CFA20_BOVIN	1.1e-87	79.26	Cilia- and flagella-associated protein 20 OS=Bos taurus GN=CFAP20 PE=2 SV=1	[more]
CFA20_MOUSE	1.1e-87	79.26	Cilia- and flagella-associated protein 20 OS=Mus musculus GN=Cfap20 PE=1 SV=1	[more]
CFA20_CHICK	1.5e-87	78.72	Cilia- and flagella-associated protein 20 OS=Gallus gallus GN=CFAP20 PE=2 SV=1	[more]

BLAST of CmaCh18G008440 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A067KZY9_JATCU	1.0e-98	93.16	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_24562 PE=4 SV=1	[more]
A0A059C9Q0_EUCGR	5.0e-98	91.58	Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_E03953 PE=4 SV=1	[more]
A0A0K9RIN2_SPIOL	5.0e-98	91.58	Uncharacterized protein OS=Spinacia oleracea GN=SOVF_067550 PE=4 SV=1	[more]
W9QXN2_9ROSA	1.4e-97	91.05	Uncharacterized protein OS=Morus notabilis GN=L484_016435 PE=4 SV=1	[more]
M5XRG3_PRUPE	1.9e-97	91.58	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011944mg PE=4 SV=1	[more]

BLAST of CmaCh18G008440 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G12300.1	6.4e-97	86.84	unknown protein	[more]

BLAST of CmaCh18G008440 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449449252\|ref\|XP_004142379.1\|	6.9e-101	95.26	PREDICTED: cilia- and flagella-associated protein 20 isoform X2 [Cucumis sativus...	[more]
gi\|778706935\|ref\|XP_011655943.1\|	8.4e-99	91.88	PREDICTED: cilia- and flagella-associated protein 20 isoform X1 [Cucumis sativus...	[more]
gi\|659092267\|ref\|XP_008446984.1\|	8.4e-99	91.88	PREDICTED: UPF0468 protein C16orf80 homolog isoform X1 [Cucumis melo]	[more]
gi\|802574207\|ref\|XP_012068715.1\|	1.4e-98	93.16	PREDICTED: cilia- and flagella-associated protein 20 [Jatropha curcas]	[more]
gi\|1012264684\|ref\|XP_015947049.1\|	4.2e-98	92.11	PREDICTED: cilia- and flagella-associated protein 20 [Arachis duranensis]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR007714	CFA20/WDR90/C3orf67

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh18G008440.1	CmaCh18G008440.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007714	Cilia/flagella-associated protein 20/WDR90/C3orf67	PANTHER	PTHR12458	ORF PROTEIN	coord: 2..188 score: 1.3E
IPR007714	Cilia/flagella-associated protein 20/WDR90/C3orf67	PFAM	PF05018	DUF667	coord: 1..184 score: 3.4

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh18G008440	Cucsa.307780	Cucumber (Gy14) v1	cgycmaB0849
CmaCh18G008440	Cla009917	Watermelon (97103) v1	cmawmB376
CmaCh18G008440	Csa5G625990	Cucumber (Chinese Long) v2	cmacuB417
CmaCh18G008440	ClCG05G027020	Watermelon (Charleston Gray)	cmawcgB367
CmaCh18G008440	CSPI05G27790	Wild cucumber (PI 183967)	cmacpiB423
CmaCh18G008440	CmoCh18G008500	Cucurbita moschata (Rifu)	cmacmoB406
CmaCh18G008440	Cp4.1LG09g04690	Cucurbita pepo (Zucchini)	cmacpeB415
CmaCh18G008440	MELO3C034019.2	Melon (DHL92) v3.6.1	cmamedB408
CmaCh18G008440	CsaV3_5G036940	Cucumber (Chinese Long) v3	cmacucB0498
CmaCh18G008440	Cla97C05G109250	Watermelon (97103) v2	cmawmbB427
CmaCh18G008440	Bhi07G001001	Wax gourd	cmawgoB0540
CmaCh18G008440	CsGy5G027220	Cucumber (Gy14) v2	cgybcmaB626
CmaCh18G008440	Carg14421	Silver-seed gourd	carcmaB1012

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh18G008440	Cucurbita maxima (Rimu)	cmacmaB402
CmaCh18G008440	Cucurbita moschata (Rifu)	cmacmoB420
CmaCh18G008440	Melon (DHL92) v3.5.1	cmameB351
CmaCh18G008440	Cucurbita pepo (Zucchini)	cmacpeB429
CmaCh18G008440	Bottle gourd (USVL1VR-Ls)	cmalsiB379
CmaCh18G008440	Bottle gourd (USVL1VR-Ls)	cmalsiB384
CmaCh18G008440	Cucumber (Gy14) v2	cgybcmaB627
CmaCh18G008440	Melon (DHL92) v3.6.1	cmamedB409
CmaCh18G008440	Silver-seed gourd	carcmaB1167