CmaCh18G008060 (gene) Cucurbita maxima (Rimu)

Overview
NameCmaCh18G008060
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu))
DescriptionU4/U6 small nuclear ribonucleoprotein Prp31
LocationCma_Chr18 : 7062094 .. 7065635 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
TGCATCGGCGAACGGCGGTCGTAAAATTCAATTGTTATCTCTTCCTCTGTTTCTGACTATTTCCGTCGATCACAAGCCATTGCCAGTTTCTCCTCTTTCTTTCGTCGGCGTTCTTTCTGATCGTTCTGAGTGTGAATTTTATCTCGTCGGTTACCTTGCTGTAACATTTGGAGAGTATATTTCATCCGAGGTTTGGGATTGCCTTGTGTGTAAAAGCATCAGAGTGTGGTTTTATCAGTTTAGGTTTATATTTGTATGTTCCTAGCTCTGGATATTGAAACTATAAAATTCAGCTATTCTTCAACTTGGTGCTGAATTGATTACGACCAAGACAACCAGGGAAGCTTTATAATCTTGTGGAGAAGCTTAGAAAATGGTCAGTAACTTTTTTTTTTTTTTGTTCTGCTTGCATCCATGAAATGTTAGGGTTTCAGCTCTTTCTTTTGTATGCTGATTTAGTTTAGTCTCTTGTTTTTTCATGTAATTCAAATTGACTTATGTTGACATTATGAATTTGAGAATATTCTATTAAATATGTAGCTCAATTCTTTATCAGCTGCTAATTCTGTGTTGCTATTCGTTCGTTTTCGAATTTTAAAGTTACTGAAAGGATATCTTGTATTCAAGAATTTTCTGGATCAGCTTATAATTCATTATTGGTGTAGGGGAACTTGATCTTTTTTCTCTCTTGCATGTAATTCTTTGGAATGAACAAGTTGTGAATCGCTGTATTTGTTTCTACTTCTTGTAATGCTATTGTTGTTATCTTTTTATTCATTTTGCTATGATGCTTCTTCCTTCAACTGTATGTTAGAGTCTATCGTGAAAACGTGAATTATCTTGCTTATTGATGATCATATTTTTTCTGGGTTTTGTAGGCTACTTTAGCCGATTCTTTTCTAGCAGATCTTGATGAACTCTCTGATGAAGACAATTTTCCGGTGAGCAAATGCATTTTACCTTCCTATCGGGAAAGTAAATTCCATAATCATGTTAGTAGTAGTGTGAACCAATCAATAGTTACTGAATGATTACAGGATGAGGAAGATGTTGATGCTGAAAATATGGAAGAGGATATTGATGGAGACCTTGCCGACCTAGAAAGCCTTAATTATGATGATCTTGATAATGTCTCAAAATTGCAGAAATCACAGAGATACAGTGATATAATGCAGGTTAGTTCACATGAAAGTTTCCCTTATCACTTCGGCATACCTAGTGGCTTTAACGGAAAGGGTTTGGTAAAAGGCGAGTAAATACATTGGAACTCTGTTTTGTCTATTATGCTTACCTTTTGTTGACTGATAAGTATGGGTTACTATTTAATCATTGGACTTTTTTCTCTGTGATAATTCATTGCTTTTAAATAATGCTATTGGAATTTTGATGCATTTTCTAATTTACTATTGAAAACCATGTTGTTCCTTGAACCAAAACTCGTCTCCTTGAAAGGTTAATTTTTATTGCTCATTACATGTTGGATTTCATGATGCTTTATCTCCAGATCATTAAGTTTCTGCAGACTGATAAGTTATAGGTTATCATATAATTATTTGGATTTTACAGAAAGTGGAAGATGCATTACAGAAGGATTCTAATATCTCAAATCAAGGATTAGTATTGGAAGATGATCCTGAGTACCAACTGATTGTGGAGTGTAATGCTTTGTCGGTGGATATTGAGAATGAAATTATTATTATTCACAATTTTATACGTGATAAATATCGATTGAAATTTCCAGAGCTTGAATCACTTGTGCACCACCCAATCGATTATGCTCGAGTTGTTAAGAAGATTGGCAATGAAATGGATTTGACTCTTGTAGACTTAGAAGGGCTTTTACCCTCTGCTGTCATTATGGTTGTCTCAGTTACAGCATCTACCACAAGTGGCAAGCCACTTCCAGAGGAAATTCTCCAGAAAACAATTGATGCATGTGACCGGGCTCTTGCTTTAGATTCAGCAAAGAAAATGGTTCTTAACTTTGTTGAAAGTAGAATGGGGTATATTGCACCAAATCTTTCAGCCATAGTTGGAAGTGCTGTTGCAGCAAAACTAATGGGAACTGCTGGTGGGCTTGCTTCTTTAGCTAAGATGCCTGCTTGCAATGTCCAGCTTCTTGGTGCGAAGAAAAAGAACCTTGCTGGGTTTTCCACAGCAACTTCACAGTTTCGGTTAGGTTACATTGAGCAAACAGAGATATTCCAATCAACACCTCCCCATTTGAAGATGCGTGCTTGTCGACTTGTATCTGCAAAATCAACACTTGCAGCACGAGTTGACTCCACCAGGGGCGATCCTACTGGGAAGACTGGAAGAGTTTTTAAAGATGAGATCCTTAAGAAAATTGAGAAGTGGCAAGAACCTCCACCAGCTAAACAACCAAAACCTCTTCCGGTCCCTGATTCTGAACCCAAAAAGAAGAGAGGTGGCCGTCGACTAAGGAAGATGAAGGAAAGGTACTGATATTTTTTTCCATCTCTCTAACAATCAAAGGTTTAATTGTTTCACTTTTCGGTTGATCATGGATCAATATGACTTCCTTTGTAGATATGCAACAACAGAGATGAGGAAGCTAGCCAACAGGATGCAGTTTGGGGTGCCTGAAGAGAGTTCTTTAGGCAAGGCTTTCGTTCATTTTTATAATAATCTGGATTGGTTAAATTTGTATTCTTGCTTATGCTTCATTCCATTTACATTAGTATAAGATGCAATGCTGTGCTGTTCGATAAGCTTGAGTTGCCAAGTTGTTTGTCTTGTGAACCAGAAAACAGTCATAATTGCAAGTAATACTACTATAACCATCTTGGGTCTTTCCTCTTTCAGGAATATTGGCATGCCAAAAGTAGTTGTATTTTCATCTGTATTTAGAAATTTGTTCTGGATGGAATAAGTAATTATTTGAAGCATTCTCCAATAAGATTCTGAATAAAGATTTCATTCTCTTCATCCTTTCATACAACAGGAGATGGATTAGGGGAAGGGTATGGAATGCTTGGTCAGGCTGGGAGTGGCAAGCTGCGTGTGTCAGCTGCTCAGAGCAAGCTTGCCGCAAAAGTTGTTAAGAAGTAAGTCAAGTCATTGAGCTGATATTAATATTTTCATACCCCTGGAAAATAGAAAATGAAAAATAGAAGTAGATGAGAAAGAGGAGATACTTGCAGCCTAAAATCTGCCCGTTTATCTGTTTTTGTTGACTTATTTTCTCAATTTACTTTTAGGTTCAAGGAAAAACGTTATGGAAGCAGTGGTGCTACGTCTGGCCTGACGTCCAGTTTAGCATTTACACCTGTACAAGTCAGTATTTCTTGCCTTCCTCACCAGTTCCTCCTATGTTATCTAATGTTCGCCTAGAAAGTAATTGTTCTTTTTTTTCATGATACTGCCTGGATACTTAATGTCGGGGTTGTGAGAATTTCATATTTTCGTTGCAGGGGATTGAGCTGTCGAATCCTCAGGCTCATATGAATCAACTAGGCAGTGGAACTCAAAGCACCTACTTTTCTGAAACGGGAACATTTTCAAAAATCAGGAAAAACTAA

mRNA sequence

TGCATCGGCGAACGGCGGTCGTAAAATTCAATTGTTATCTCTTCCTCTGTTTCTGACTATTTCCGTCGATCACAAGCCATTGCCAGTTTCTCCTCTTTCTTTCGTCGGCGTTCTTTCTGATCGTTCTGAGTGTGAATTTTATCTCGTCGGTTACCTTGCTGTAACATTTGGAGAGTATATTTCATCCGAGCTATTCTTCAACTTGGTGCTGAATTGATTACGACCAAGACAACCAGGGAAGCTTTATAATCTTGTGGAGAAGCTTAGAAAATGGCTACTTTAGCCGATTCTTTTCTAGCAGATCTTGATGAACTCTCTGATGAAGACAATTTTCCGGATGAGGAAGATGTTGATGCTGAAAATATGGAAGAGGATATTGATGGAGACCTTGCCGACCTAGAAAGCCTTAATTATGATGATCTTGATAATGTCTCAAAATTGCAGAAATCACAGAGATACAGTGATATAATGCAGAAAGTGGAAGATGCATTACAGAAGGATTCTAATATCTCAAATCAAGGATTAGTATTGGAAGATGATCCTGAGTACCAACTGATTGTGGAGTGTAATGCTTTGTCGGTGGATATTGAGAATGAAATTATTATTATTCACAATTTTATACGTGATAAATATCGATTGAAATTTCCAGAGCTTGAATCACTTGTGCACCACCCAATCGATTATGCTCGAGTTGTTAAGAAGATTGGCAATGAAATGGATTTGACTCTTGTAGACTTAGAAGGGCTTTTACCCTCTGCTGTCATTATGGTTGTCTCAGTTACAGCATCTACCACAAGTGGCAAGCCACTTCCAGAGGAAATTCTCCAGAAAACAATTGATGCATGTGACCGGGCTCTTGCTTTAGATTCAGCAAAGAAAATGGTTCTTAACTTTGTTGAAAGTAGAATGGGGTATATTGCACCAAATCTTTCAGCCATAGTTGGAAGTGCTGTTGCAGCAAAACTAATGGGAACTGCTGGTGGGCTTGCTTCTTTAGCTAAGATGCCTGCTTGCAATGTCCAGCTTCTTGGTGCGAAGAAAAAGAACCTTGCTGGGTTTTCCACAGCAACTTCACAGTTTCGGTTAGGTTACATTGAGCAAACAGAGATATTCCAATCAACACCTCCCCATTTGAAGATGCGTGCTTGTCGACTTGTATCTGCAAAATCAACACTTGCAGCACGAGTTGACTCCACCAGGGGCGATCCTACTGGGAAGACTGGAAGAGTTTTTAAAGATGAGATCCTTAAGAAAATTGAGAAGTGGCAAGAACCTCCACCAGCTAAACAACCAAAACCTCTTCCGGTCCCTGATTCTGAACCCAAAAAGAAGAGAGGTGGCCGTCGACTAAGGAAGATGAAGGAAAGATATGCAACAACAGAGATGAGGAAGCTAGCCAACAGGATGCAGTTTGGGGTGCCTGAAGAGAGTTCTTTAGGAGATGGATTAGGGGAAGGGTATGGAATGCTTGGTCAGGCTGGGAGTGGCAAGCTGCGTGTGTCAGCTGCTCAGAGCAAGCTTGCCGCAAAAGTTGTTAAGAAGTTCAAGGAAAAACGTTATGGAAGCAGTGGTGCTACGTCTGGCCTGACGTCCAGTTTAGCATTTACACCTGTACAAGGGATTGAGCTGTCGAATCCTCAGGCTCATATGAATCAACTAGGCAGTGGAACTCAAAGCACCTACTTTTCTGAAACGGGAACATTTTCAAAAATCAGGAAAAACTAA

Coding sequence (CDS)

ATGGCTACTTTAGCCGATTCTTTTCTAGCAGATCTTGATGAACTCTCTGATGAAGACAATTTTCCGGATGAGGAAGATGTTGATGCTGAAAATATGGAAGAGGATATTGATGGAGACCTTGCCGACCTAGAAAGCCTTAATTATGATGATCTTGATAATGTCTCAAAATTGCAGAAATCACAGAGATACAGTGATATAATGCAGAAAGTGGAAGATGCATTACAGAAGGATTCTAATATCTCAAATCAAGGATTAGTATTGGAAGATGATCCTGAGTACCAACTGATTGTGGAGTGTAATGCTTTGTCGGTGGATATTGAGAATGAAATTATTATTATTCACAATTTTATACGTGATAAATATCGATTGAAATTTCCAGAGCTTGAATCACTTGTGCACCACCCAATCGATTATGCTCGAGTTGTTAAGAAGATTGGCAATGAAATGGATTTGACTCTTGTAGACTTAGAAGGGCTTTTACCCTCTGCTGTCATTATGGTTGTCTCAGTTACAGCATCTACCACAAGTGGCAAGCCACTTCCAGAGGAAATTCTCCAGAAAACAATTGATGCATGTGACCGGGCTCTTGCTTTAGATTCAGCAAAGAAAATGGTTCTTAACTTTGTTGAAAGTAGAATGGGGTATATTGCACCAAATCTTTCAGCCATAGTTGGAAGTGCTGTTGCAGCAAAACTAATGGGAACTGCTGGTGGGCTTGCTTCTTTAGCTAAGATGCCTGCTTGCAATGTCCAGCTTCTTGGTGCGAAGAAAAAGAACCTTGCTGGGTTTTCCACAGCAACTTCACAGTTTCGGTTAGGTTACATTGAGCAAACAGAGATATTCCAATCAACACCTCCCCATTTGAAGATGCGTGCTTGTCGACTTGTATCTGCAAAATCAACACTTGCAGCACGAGTTGACTCCACCAGGGGCGATCCTACTGGGAAGACTGGAAGAGTTTTTAAAGATGAGATCCTTAAGAAAATTGAGAAGTGGCAAGAACCTCCACCAGCTAAACAACCAAAACCTCTTCCGGTCCCTGATTCTGAACCCAAAAAGAAGAGAGGTGGCCGTCGACTAAGGAAGATGAAGGAAAGATATGCAACAACAGAGATGAGGAAGCTAGCCAACAGGATGCAGTTTGGGGTGCCTGAAGAGAGTTCTTTAGGAGATGGATTAGGGGAAGGGTATGGAATGCTTGGTCAGGCTGGGAGTGGCAAGCTGCGTGTGTCAGCTGCTCAGAGCAAGCTTGCCGCAAAAGTTGTTAAGAAGTTCAAGGAAAAACGTTATGGAAGCAGTGGTGCTACGTCTGGCCTGACGTCCAGTTTAGCATTTACACCTGTACAAGGGATTGAGCTGTCGAATCCTCAGGCTCATATGAATCAACTAGGCAGTGGAACTCAAAGCACCTACTTTTCTGAAACGGGAACATTTTCAAAAATCAGGAAAAACTAA

Protein sequence

MATLADSFLADLDELSDEDNFPDEEDVDAENMEEDIDGDLADLESLNYDDLDNVSKLQKSQRYSDIMQKVEDALQKDSNISNQGLVLEDDPEYQLIVECNALSVDIENEIIIIHNFIRDKYRLKFPELESLVHHPIDYARVVKKIGNEMDLTLVDLEGLLPSAVIMVVSVTASTTSGKPLPEEILQKTIDACDRALALDSAKKMVLNFVESRMGYIAPNLSAIVGSAVAAKLMGTAGGLASLAKMPACNVQLLGAKKKNLAGFSTATSQFRLGYIEQTEIFQSTPPHLKMRACRLVSAKSTLAARVDSTRGDPTGKTGRVFKDEILKKIEKWQEPPPAKQPKPLPVPDSEPKKKRGGRRLRKMKERYATTEMRKLANRMQFGVPEESSLGDGLGEGYGMLGQAGSGKLRVSAAQSKLAAKVVKKFKEKRYGSSGATSGLTSSLAFTPVQGIELSNPQAHMNQLGSGTQSTYFSETGTFSKIRKN
Homology
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BLAST of CmaCh18G008060 vs. Swiss-Prot
Match: PRP31_MOUSE (U4/U6 small nuclear ribonucleoprotein Prp31 OS=Mus musculus GN=Prpf31 PE=1 SV=3)

HSP 1 Score: 386.3 bits (991), Expect = 4.8e-106
Identity = 234/496 (47.18%), Postives = 332/496 (66.94%), Query Frame = 1 

Query: 3   TLADSFLADLDELSDED---NFPDEEDVDA-ENMEEDIDGDLADLESLNYDDLDNVSKLQ 62
           +LAD  LADL+E ++E+   ++ +EE+  A E+++E+   DL+       D + +++KL 
Sbjct: 2   SLADELLADLEEAAEEEEGGSYGEEEEEPAIEDVQEETQLDLSG------DSVKSIAKLW 61

Query: 63  KSQRYSDIMQKVEDALQKDSNISNQGLVLEDDPEYQLIVECNALSVDIENEIIIIHNFIR 122
            S+ +++IM K+E+ + K +N+S     +E  PEY++IV+ N L+V+IENE+ IIH FIR
Sbjct: 62  DSKMFAEIMMKIEEYISKQANVSEVMGPVEAAPEYRVIVDANNLTVEIENELNIIHKFIR 121

Query: 123 DKYRLKFPELESLVHHPIDYARVVKKIGNEMDLTL--VDLEGLLPSAVIMVVSVTASTTS 182
           DKY  +FPELESLV + +DY R VK++GN +D      +L+ +L +A IMVVSVTASTT 
Sbjct: 122 DKYSKRFPELESLVPNALDYIRTVKELGNSLDKCKNNENLQQILTNATIMVVSVTASTTQ 181

Query: 183 GKPLPEEILQKTIDACDRALALDSAKKMVLNFVESRMGYIAPNLSAIVGSAVAAKLMGTA 242
           G+ L +E L++  +ACD AL L+++K  +  +VESRM +IAPNLS I+G++ AAK+MG A
Sbjct: 182 GQQLSDEELERLEEACDMALELNASKHRIYEYVESRMSFIAPNLSIIIGASTAAKIMGVA 241

Query: 243 GGLASLAKMPACNVQLLGAKKKNLAGFSTATSQFRLGYIEQTEIFQSTPPHLKMRACRLV 302
           GGL +L+KMPACN+ LLGA++K L+GFS+ +     GYI  ++I QS PP L+ +A RLV
Sbjct: 242 GGLTNLSKMPACNIMLLGAQRKTLSGFSSTSVLPHTGYIYHSDIVQSLPPDLRRKAARLV 301

Query: 303 SAKSTLAARVDSTRGDPTGKTGRVFKDEILKKIEKWQEPPPAKQPKPLPVPDSEPKKKRG 362
           +AK TLAARVDS      GK G   KDEI +K +KWQEPPP KQ KPLP P    +KKRG
Sbjct: 302 AAKCTLAARVDSFHESTEGKVGYELKDEIERKFDKWQEPPPVKQVKPLPAPLDGQRKKRG 361

Query: 363 GRRLRKMKERYATTEMRKLANRMQFGVPEESSLGDGLGEGYGMLGQAGSGKLR---VSAA 422
           GRR RKMKER   TE+RK ANRM FG  EE +  + LG   G LG++GSG++R   V+ A
Sbjct: 362 GRRYRKMKERLGLTEIRKQANRMSFGEIEEDAYQEDLGFSLGHLGKSGSGRVRQTQVNEA 421

Query: 423 QSKLAAKVVKKFKEKR---YGSSGA----TSGLTSSLAFTPVQGIELSNPQAHMNQLGSG 482
                +K +++  +K+   YG        +SG  SS+AFTP+QG+E+ NPQA   ++   
Sbjct: 422 TKARISKTLQRTLQKQSVVYGGKSTIRDRSSGTASSVAFTPLQGLEIVNPQAAEKKVAEA 481

[Close]
BLAST of CmaCh18G008060 vs. Swiss-Prot
Match: PRP31_XENLA (U4/U6 small nuclear ribonucleoprotein Prp31 OS=Xenopus laevis GN=prpf31 PE=2 SV=1)

HSP 1 Score: 384.8 bits (987), Expect = 1.4e-105
Identity = 237/495 (47.88%), Postives = 327/495 (66.06%), Query Frame = 1 

Query: 3   TLADSFLADLDELSDED--NFPDEEDVDA-ENMEEDIDGDLADLESLNYDDLDNVSKLQK 62
           +LAD  LADL+E ++E+  N  DE+D++  E ++E++  DL      N + + +++KL  
Sbjct: 2   SLADELLADLEEAAEEEEENLIDEDDLETIEEVDEEMQVDL------NAESVKSIAKLSD 61

Query: 63  SQRYSDIMQKVEDALQKDSNISNQGLVLEDDPEYQLIVECNALSVDIENEIIIIHNFIRD 122
           S+ +S+I+ K+E  +QK    S     +E  PEY++IV+ N L+V+IENE+ IIH FIRD
Sbjct: 62  SKLFSEILLKIEGYIQKQPKASEVMGPVEAAPEYKVIVDANNLTVEIENELNIIHKFIRD 121

Query: 123 KYRLKFPELESLVHHPIDYARVVKKIGNEMDLTL--VDLEGLLPSAVIMVVSVTASTTSG 182
           KY  +FPELESLV + +DY R VK++GN +D      +L+ +L +A IMVVSVTASTT G
Sbjct: 122 KYSKRFPELESLVPNALDYIRTVKELGNNLDKCKNNENLQQILTNATIMVVSVTASTTQG 181

Query: 183 KPLPEEILQKTIDACDRALALDSAKKMVLNFVESRMGYIAPNLSAIVGSAVAAKLMGTAG 242
           + L +E L++  +ACD AL L+ +K  +  +VESRM +IAPNLS IVG++ AAK+MG AG
Sbjct: 182 QQLTDEELERIEEACDMALELNQSKHRIYEYVESRMSFIAPNLSIIVGASTAAKIMGIAG 241

Query: 243 GLASLAKMPACNVQLLGAKKKNLAGFSTATSQFRLGYIEQTEIFQSTPPHLKMRACRLVS 302
           GL +L+KMPACNV LLGA++K L GFS+ +     GYI  +EI QS P  L  +A RLVS
Sbjct: 242 GLTNLSKMPACNVMLLGAQRKTLTGFSSTSVLPHTGYIYHSEIVQSLPSDLHRKAARLVS 301

Query: 303 AKSTLAARVDSTRGDPTGKTGRVFKDEILKKIEKWQEPPPAKQPKPLPVPDSEPKKKRGG 362
           AK TLA+RVDS   +P GK G   K+EI +K +KWQEPPP KQ KPLP P    +KKRGG
Sbjct: 302 AKCTLASRVDSFHENPEGKIGYDLKEEIERKFDKWQEPPPVKQVKPLPAPLDGQRKKRGG 361

Query: 363 RRLRKMKERYATTEMRKLANRMQFGVPEESSLGDGLGEGYGMLGQAGSGKLR---VSAAQ 422
           RR RKMKER   TE+RK ANRM FG  EE +  + LG   G LG++GSG++R   V+ A 
Sbjct: 362 RRYRKMKERLGLTEIRKQANRMSFGEIEEDAYQEDLGFSLGHLGKSGSGRIRQAQVNEAT 421

Query: 423 SKLAAKVVKKFKEKR---YGSSGA----TSGLTSSLAFTPVQGIELSNPQAHMNQLGSGT 482
               +K +++  +K+   YG        +SG  SS+AFTP+QG+E+ NPQA   ++    
Sbjct: 422 KARISKTLQRTLQKQSVVYGGKSTVRDRSSGTASSVAFTPLQGLEIVNPQAAEKKVAEAN 481

[Close]
BLAST of CmaCh18G008060 vs. Swiss-Prot
Match: PRP31_HUMAN (U4/U6 small nuclear ribonucleoprotein Prp31 OS=Homo sapiens GN=PRPF31 PE=1 SV=2)

HSP 1 Score: 383.3 bits (983), Expect = 4.0e-105
Identity = 234/496 (47.18%), Postives = 329/496 (66.33%), Query Frame = 1 

Query: 3   TLADSFLADLDELSDED---NFPDEEDVDA-ENMEEDIDGDLADLESLNYDDLDNVSKLQ 62
           +LAD  LADL+E ++E+   ++ +EE+  A E+++E+   DL+       D +  ++KL 
Sbjct: 2   SLADELLADLEEAAEEEEGGSYGEEEEEPAIEDVQEETQLDLSG------DSVKTIAKLW 61

Query: 63  KSQRYSDIMQKVEDALQKDSNISNQGLVLEDDPEYQLIVECNALSVDIENEIIIIHNFIR 122
            S+ +++IM K+E+ + K +  S     +E  PEY++IV+ N L+V+IENE+ IIH FIR
Sbjct: 62  DSKMFAEIMMKIEEYISKQAKASEVMGPVEAAPEYRVIVDANNLTVEIENELNIIHKFIR 121

Query: 123 DKYRLKFPELESLVHHPIDYARVVKKIGNEMDLTL--VDLEGLLPSAVIMVVSVTASTTS 182
           DKY  +FPELESLV + +DY R VK++GN +D      +L+ +L +A IMVVSVTASTT 
Sbjct: 122 DKYSKRFPELESLVPNALDYIRTVKELGNSLDKCKNNENLQQILTNATIMVVSVTASTTQ 181

Query: 183 GKPLPEEILQKTIDACDRALALDSAKKMVLNFVESRMGYIAPNLSAIVGSAVAAKLMGTA 242
           G+ L EE L++  +ACD AL L+++K  +  +VESRM +IAPNLS I+G++ AAK+MG A
Sbjct: 182 GQQLSEEELERLEEACDMALELNASKHRIYEYVESRMSFIAPNLSIIIGASTAAKIMGVA 241

Query: 243 GGLASLAKMPACNVQLLGAKKKNLAGFSTATSQFRLGYIEQTEIFQSTPPHLKMRACRLV 302
           GGL +L+KMPACN+ LLGA++K L+GFS+ +     GYI  ++I QS PP L+ +A RLV
Sbjct: 242 GGLTNLSKMPACNIMLLGAQRKTLSGFSSTSVLPHTGYIYHSDIVQSLPPDLRRKAARLV 301

Query: 303 SAKSTLAARVDSTRGDPTGKTGRVFKDEILKKIEKWQEPPPAKQPKPLPVPDSEPKKKRG 362
           +AK TLAARVDS      GK G   KDEI +K +KWQEPPP KQ KPLP P    +KKRG
Sbjct: 302 AAKCTLAARVDSFHESTEGKVGYELKDEIERKFDKWQEPPPVKQVKPLPAPLDGQRKKRG 361

Query: 363 GRRLRKMKERYATTEMRKLANRMQFGVPEESSLGDGLGEGYGMLGQAGSGKLR---VSAA 422
           GRR RKMKER   TE+RK ANRM FG  EE +  + LG   G LG++GSG++R   V+ A
Sbjct: 362 GRRYRKMKERLGLTEIRKQANRMSFGEIEEDAYQEDLGFSLGHLGKSGSGRVRQTQVNEA 421

Query: 423 QSKLAAKVVKKFKEKR---YGSSGA----TSGLTSSLAFTPVQGIELSNPQAHMNQLGSG 482
                +K +++  +K+   YG        +SG  SS+AFTP+QG+E+ NPQA   ++   
Sbjct: 422 TKARISKTLQRTLQKQSVVYGGKSTIRDRSSGTASSVAFTPLQGLEIVNPQAAEKKVAEA 481

[Close]
BLAST of CmaCh18G008060 vs. Swiss-Prot
Match: PRP31_XENTR (U4/U6 small nuclear ribonucleoprotein Prp31 OS=Xenopus tropicalis GN=prpf31 PE=2 SV=1)

HSP 1 Score: 380.2 bits (975), Expect = 3.4e-104
Identity = 234/495 (47.27%), Postives = 326/495 (65.86%), Query Frame = 1 

Query: 3   TLADSFLADLDELSDED--NFPDEEDVDA-ENMEEDIDGDLADLESLNYDDLDNVSKLQK 62
           +LAD  LADL+E ++E+  N  DE+D++  E ++E++  DL      N + + +++KL  
Sbjct: 2   SLADELLADLEEAAEEEEENLIDEDDLETIEEVQEEMQVDL------NAESVKSIAKLSD 61

Query: 63  SQRYSDIMQKVEDALQKDSNISNQGLVLEDDPEYQLIVECNALSVDIENEIIIIHNFIRD 122
           S+ +S+I+ K++  ++K    S     +E  PEY++IV+ N L+V+IENE+ IIH FIRD
Sbjct: 62  SKLFSEILLKIDGYIKKQPKASEVMGPVEAAPEYKVIVDANNLTVEIENELNIIHKFIRD 121

Query: 123 KYRLKFPELESLVHHPIDYARVVKKIGNEMDLTL--VDLEGLLPSAVIMVVSVTASTTSG 182
           KY  +FPELESLV + +DY R VK++GN +D      +L+ +L +A IMVVSVTASTT G
Sbjct: 122 KYSKRFPELESLVPNALDYIRTVKELGNNLDKCKNNENLQQILTNATIMVVSVTASTTQG 181

Query: 183 KPLPEEILQKTIDACDRALALDSAKKMVLNFVESRMGYIAPNLSAIVGSAVAAKLMGTAG 242
           + L +E L++  +ACD AL L+ +K  +  +VESRM +IAPNLS IVG++ AAK+MG AG
Sbjct: 182 QQLTDEELERIEEACDMALELNQSKHRIYEYVESRMSFIAPNLSIIVGASTAAKIMGIAG 241

Query: 243 GLASLAKMPACNVQLLGAKKKNLAGFSTATSQFRLGYIEQTEIFQSTPPHLKMRACRLVS 302
           GL +L+KMPACNV LLGA++K L+GFS+ +     GYI  ++I QS PP L  +A RLVS
Sbjct: 242 GLTNLSKMPACNVMLLGAQRKTLSGFSSTSVLPHTGYIYHSDIVQSLPPDLHRKAARLVS 301

Query: 303 AKSTLAARVDSTRGDPTGKTGRVFKDEILKKIEKWQEPPPAKQPKPLPVPDSEPKKKRGG 362
           AK TLAARVDS      GK G   K+EI +K +KWQEPPP KQ KPLP P    +KKRGG
Sbjct: 302 AKCTLAARVDSFHESSEGKVGYDLKEEIERKFDKWQEPPPVKQVKPLPAPLDGQRKKRGG 361

Query: 363 RRLRKMKERYATTEMRKLANRMQFGVPEESSLGDGLGEGYGMLGQAGSGKLR---VSAAQ 422
           RR RKMKER   TE+RK ANRM F   EE +  + LG   G LG++GSG++R   V+ A 
Sbjct: 362 RRYRKMKERLGLTEIRKQANRMSFAEIEEDAYQEDLGFSLGHLGKSGSGRIRQAQVNEAT 421

Query: 423 SKLAAKVVKKFKEKR---YGSSGA----TSGLTSSLAFTPVQGIELSNPQAHMNQLGSGT 482
               +K +++  +K+   YG        +SG  SS+AFTP+QG+E+ NPQA   ++    
Sbjct: 422 KARISKTLQRTLQKQSVVYGGKSTIRDRSSGTASSVAFTPLQGLEIVNPQAAEKKVAEAN 481

[Close]
BLAST of CmaCh18G008060 vs. Swiss-Prot
Match: PRP31_DANRE (U4/U6 small nuclear ribonucleoprotein Prp31 OS=Danio rerio GN=prpf31 PE=2 SV=1)

HSP 1 Score: 371.3 bits (952), Expect = 1.6e-101
Identity = 227/502 (45.22%), Postives = 319/502 (63.55%), Query Frame = 1 

Query: 3   TLADSFLADLDELSDEDN-FP--DEEDVDAENMEEDIDGDLADL-ESLNYD-----DLDN 62
           +LAD  LADL+E  +ED  +P  +E + D E  E  +DG L D+ E +  D      + +
Sbjct: 2   SLADELLADLEEAGEEDGLYPGGEEGESDGEPGERQVDGGLEDIPEEMEVDYSSTESVTS 61

Query: 63  VSKLQKSQRYSDIMQKVEDALQKDSNISNQGLVLEDDPEYQLIVECNALSVDIENEIIII 122
           ++KL+ S+ +++IM K+   +      S     +E DPEY+LIV  N L+V+I+NE+ II
Sbjct: 62  IAKLRHSKPFAEIMDKISHYVGNQRKNSEVSGPVEADPEYRLIVAANNLTVEIDNELNII 121

Query: 123 HNFIRDKYRLKFPELESLVHHPIDYARVVKKIGNEMDLTLVD--LEGLLPSAVIMVVSVT 182
           H F+RDKY  +FPELESLV + +DY R VK++GN ++    +  L+ +L +A IMVVSVT
Sbjct: 122 HKFVRDKYSKRFPELESLVPNALDYIRTVKELGNNLEKCKNNETLQQILTNATIMVVSVT 181

Query: 183 ASTTSGKPLPEEILQKTIDACDRALALDSAKKMVLNFVESRMGYIAPNLSAIVGSAVAAK 242
           ASTT G  L ++ LQ+  +ACD AL L+ +K  +  +VESRM +IAPNLS IVG++ AAK
Sbjct: 182 ASTTQGTMLGDDELQRLEEACDMALELNQSKHRIYEYVESRMSFIAPNLSIIVGASTAAK 241

Query: 243 LMGTAGGLASLAKMPACNVQLLGAKKKNLAGFSTATSQFRLGYIEQTEIFQSTPPHLKMR 302
           +MG AGGL +L+KMPACN+ LLGA+++ L+GFS+ +     GYI   ++ Q+ PP L+ +
Sbjct: 242 IMGVAGGLTNLSKMPACNLMLLGAQRRTLSGFSSTSLLPHTGYIYHCDVVQTLPPDLRRK 301

Query: 303 ACRLVSAKSTLAARVDSTRGDPTGKTGRVFKDEILKKIEKWQEPPPAKQPKPLPVPDSEP 362
           A RLVSAK TLA+RVDS      GK G   K+EI +K +KWQEPPP KQ KPLP P    
Sbjct: 302 AARLVSAKCTLASRVDSFHESADGKVGYDLKEEIERKFDKWQEPPPVKQVKPLPAPLDGQ 361

Query: 363 KKKRGGRRLRKMKERYATTEMRKLANRMQFGVPEESSLGDGLGEGYGMLGQAGSGKLRVS 422
           +KKRGGRR RKMKER   TE+RK ANRM F   E+ +  + LG   G LG++GSG++R +
Sbjct: 362 RKKRGGRRYRKMKERLGLTEIRKHANRMTFAEIEDDAYQEDLGFSLGQLGKSGSGRVRQA 421

Query: 423 AAQSKLAAKVVKKF------KEKRYGSSGA----TSGLTSSLAFTPVQGIELSNPQAHMN 482
                  A++ K        +   YG        +SG +SS+AFTP+QG+E+ NPQA   
Sbjct: 422 QVNDSTKARISKSLQRTLQKQSMTYGGKSTVRDRSSGTSSSVAFTPLQGLEIVNPQAAEK 481

Query: 483 QLGSGTQSTYFSETGTFSKIRK 484
           ++    Q  YFS    F K+++
Sbjct: 482 KVAEANQK-YFSNMAEFLKVKR 502

[Close]
BLAST of CmaCh18G008060 vs. TrEMBL
Match: A0A0A0KSD2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G602130 PE=4 SV=1)

HSP 1 Score: 865.1 bits (2234), Expect = 3.9e-248
Identity = 461/484 (95.25%), Postives = 472/484 (97.52%), Query Frame = 1 

Query: 1   MATLADSFLADLDELSDEDNFPDEEDVDAENMEEDIDGDLADLESLNYDDLDNVSKLQKS 60
           MAT ADSFLADLDELSDED F  E   DAENMEEDIDGDLADLESLNY+DLD+VSKLQK+
Sbjct: 1   MATFADSFLADLDELSDEDKFQGEAGADAENMEEDIDGDLADLESLNYEDLDSVSKLQKT 60

Query: 61  QRYSDIMQKVEDALQKDSNISNQGLVLEDDPEYQLIVECNALSVDIENEIIIIHNFIRDK 120
           QRY+DIMQKVEDALQ DSNISNQG VLEDDPEYQLIVECNALSVDIENEIIIIHNFIRDK
Sbjct: 61  QRYNDIMQKVEDALQTDSNISNQGFVLEDDPEYQLIVECNALSVDIENEIIIIHNFIRDK 120

Query: 121 YRLKFPELESLVHHPIDYARVVKKIGNEMDLTLVDLEGLLPSAVIMVVSVTASTTSGKPL 180
           YRLKFPELESLVHHPIDYARVVKKIGNE+DLTLVDLEGLLPSAVIMVVSVTASTTSGKPL
Sbjct: 121 YRLKFPELESLVHHPIDYARVVKKIGNEVDLTLVDLEGLLPSAVIMVVSVTASTTSGKPL 180

Query: 181 PEEILQKTIDACDRALALDSAKKMVLNFVESRMGYIAPNLSAIVGSAVAAKLMGTAGGLA 240
           PEEILQKTIDACDRALALDSAKKMVL FVESRMG+IAPNLSAIVGSAVAAKLMGTAGGLA
Sbjct: 181 PEEILQKTIDACDRALALDSAKKMVLTFVESRMGHIAPNLSAIVGSAVAAKLMGTAGGLA 240

Query: 241 SLAKMPACNVQLLGAKKKNLAGFSTATSQFRLGYIEQTEIFQSTPPHLKMRACRLVSAKS 300
           +LAKMPACNVQLLGAK+KNLAGFSTATSQFR+GYIEQTEIFQSTPP LKMRACRL+SAKS
Sbjct: 241 ALAKMPACNVQLLGAKRKNLAGFSTATSQFRVGYIEQTEIFQSTPPPLKMRACRLISAKS 300

Query: 301 TLAARVDSTRGDPTGKTGRVFKDEILKKIEKWQEPPPAKQPKPLPVPDSEPKKKRGGRRL 360
           TLAARVDST GDPTGKTGRVFKDEILKKIEKWQEPPPAKQPKPLPVPDSEPKKKRGGRRL
Sbjct: 301 TLAARVDSTMGDPTGKTGRVFKDEILKKIEKWQEPPPAKQPKPLPVPDSEPKKKRGGRRL 360

Query: 361 RKMKERYATTEMRKLANRMQFGVPEESSLGDGLGEGYGMLGQAGSGKLRVSAAQSKLAAK 420
           RKMKERYATTEMRKLANRMQFGVPEESSLGDGLGEGYGMLGQAGSGKLRVSAAQSKLAAK
Sbjct: 361 RKMKERYATTEMRKLANRMQFGVPEESSLGDGLGEGYGMLGQAGSGKLRVSAAQSKLAAK 420

Query: 421 VVKKFKEKRYGSSGATSGLTSSLAFTPVQGIELSNPQAHMNQLGSGTQSTYFSETGTFSK 480
           VVKKFKEKRYGSSGATSGLTSSLAFTPVQGIELSNPQAH+NQLGSGTQSTYFSETGTFSK
Sbjct: 421 VVKKFKEKRYGSSGATSGLTSSLAFTPVQGIELSNPQAHLNQLGSGTQSTYFSETGTFSK 480

Query: 481 IRKN 485
           IRKN
Sbjct: 481 IRKN 484

[Close]
BLAST of CmaCh18G008060 vs. TrEMBL
Match: A0A067K434_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_17722 PE=4 SV=1)

HSP 1 Score: 825.1 bits (2130), Expect = 4.5e-236
Identity = 434/484 (89.67%), Postives = 467/484 (96.49%), Query Frame = 1 

Query: 1   MATLADSFLADLDELSDED-NFPDEEDVDAENMEEDIDGDLADLESLNYDDLDNVSKLQK 60
           MATLADSFLADLDELSD D +  +E+DVDA NMEED+DGD+AD+E+LNYDDLD+VSKLQK
Sbjct: 1   MATLADSFLADLDELSDNDADLVEEDDVDAGNMEEDVDGDMADIEALNYDDLDSVSKLQK 60

Query: 61  SQRYSDIMQKVEDALQKDSNISNQGLVLEDDPEYQLIVECNALSVDIENEIIIIHNFIRD 120
           +QRY+DIMQKVEDAL+K S+ISNQG+VLEDDPEYQLIVECNALSVDIENEIIIIHNFIRD
Sbjct: 61  TQRYNDIMQKVEDALEKGSDISNQGMVLEDDPEYQLIVECNALSVDIENEIIIIHNFIRD 120

Query: 121 KYRLKFPELESLVHHPIDYARVVKKIGNEMDLTLVDLEGLLPSAVIMVVSVTASTTSGKP 180
           KYRLKFPELESLVHHPIDYARVVKKIGNEMDLTLVDLEGLLPSA+IMVVSVTASTTSGKP
Sbjct: 121 KYRLKFPELESLVHHPIDYARVVKKIGNEMDLTLVDLEGLLPSAIIMVVSVTASTTSGKP 180

Query: 181 LPEEILQKTIDACDRALALDSAKKMVLNFVESRMGYIAPNLSAIVGSAVAAKLMGTAGGL 240
           LPEE+LQKTIDACDRALALDSAKK VL+FVESRMGYIAPNLSAIVGSAVAAKLMGTAGGL
Sbjct: 181 LPEEVLQKTIDACDRALALDSAKKKVLDFVESRMGYIAPNLSAIVGSAVAAKLMGTAGGL 240

Query: 241 ASLAKMPACNVQLLGAKKKNLAGFSTATSQFRLGYIEQTEIFQSTPPHLKMRACRLVSAK 300
           ++LAKMPACNVQLLGAKKKNLAGFSTATSQFR+GYIEQTE+FQ+TPP L+MRACRL++AK
Sbjct: 241 SALAKMPACNVQLLGAKKKNLAGFSTATSQFRVGYIEQTEVFQTTPPALRMRACRLLAAK 300

Query: 301 STLAARVDSTRGDPTGKTGRVFKDEILKKIEKWQEPPPAKQPKPLPVPDSEPKKKRGGRR 360
           STLAARVDSTRGDP+G+TGR  ++EI KKIEKWQEPPPAKQPKPLPVPDSEPKKKRGGRR
Sbjct: 301 STLAARVDSTRGDPSGRTGRALREEIHKKIEKWQEPPPAKQPKPLPVPDSEPKKKRGGRR 360

Query: 361 LRKMKERYATTEMRKLANRMQFGVPEESSLGDGLGEGYGMLGQAGSGKLRVSAAQSKLAA 420
           LRKMKERYA T+MRKLANRMQFGVPEESSLGDGLGEGYGMLGQAGSGKLRVS  QSKLAA
Sbjct: 361 LRKMKERYAVTDMRKLANRMQFGVPEESSLGDGLGEGYGMLGQAGSGKLRVSIGQSKLAA 420

Query: 421 KVVKKFKEKRYGSSGATSGLTSSLAFTPVQGIELSNPQAHMNQLGSGTQSTYFSETGTFS 480
           KV KKFKEK YGSSGATSGLTSSLAFTPVQGIEL+NPQAH +QLGSGTQSTYFSETGTFS
Sbjct: 421 KVAKKFKEKNYGSSGATSGLTSSLAFTPVQGIELTNPQAHAHQLGSGTQSTYFSETGTFS 480

Query: 481 KIRK 484
           KI++
Sbjct: 481 KIKR 484

[Close]
BLAST of CmaCh18G008060 vs. TrEMBL
Match: A2Q2G1_MEDTR (Pre-mRNA processing ribonucleoprotein, binding region; NOSIC OS=Medicago truncatula GN=MTR_7g037560 PE=4 SV=1)

HSP 1 Score: 803.5 bits (2074), Expect = 1.4e-229
Identity = 427/485 (88.04%), Postives = 459/485 (94.64%), Query Frame = 1 

Query: 1   MATLADSFLADLDELSD-EDNFPDEEDVDAENMEEDIDGDLADLESLNYDDLDNVSKLQK 60
           MATLAD+FLADLDELSD E   P + D DA +M+ED+DGDLADLE+LNYDDLD+VSKLQ+
Sbjct: 1   MATLADTFLADLDELSDNEAEIPADNDADAADMDEDVDGDLADLENLNYDDLDSVSKLQQ 60

Query: 61  SQRYSDIMQKVEDALQKDSNISNQGLVLEDDPEYQLIVECNALSVDIENEIIIIHNFIRD 120
           +QRY D+MQKVE+AL+K S++S QGL LEDDPEYQLIVECNALSVDIENEI+IIHNFIRD
Sbjct: 61  TQRYVDVMQKVEEALKKGSDVS-QGLDLEDDPEYQLIVECNALSVDIENEIVIIHNFIRD 120

Query: 121 KYRLKFPELESLVHHPIDYARVVKKIGNEMDLTLVDLEGLLPSAVIMVVSVTASTTSGKP 180
           KYRLKFPELESLVHHPIDYARVVKKIGNEMDLTLVDLEGLLPSA+IMVVSVTASTT+GKP
Sbjct: 121 KYRLKFPELESLVHHPIDYARVVKKIGNEMDLTLVDLEGLLPSAIIMVVSVTASTTTGKP 180

Query: 181 LPEEILQKTIDACDRALALDSAKKMVLNFVESRMGYIAPNLSAIVGSAVAAKLMGTAGGL 240
           LPEE+L KTI+ACDRALALDSAKK VL+FVESRMGYIAPN+SAIVGSAVAAKLMGTAGGL
Sbjct: 181 LPEEVLSKTIEACDRALALDSAKKKVLDFVESRMGYIAPNVSAIVGSAVAAKLMGTAGGL 240

Query: 241 ASLAKMPACNVQLLGAKKKNLAGFSTATSQFRLGYIEQTEIFQSTPPHLKMRACRLVSAK 300
           ++LAKMPACNVQLLGAKKKNLAGFSTATSQF +GYIEQTEIFQ+TPP  +MRACRLV+AK
Sbjct: 241 SALAKMPACNVQLLGAKKKNLAGFSTATSQFHVGYIEQTEIFQTTPPSFRMRACRLVAAK 300

Query: 301 STLAARVDSTRGDPTGKTGRVFKDEILKKIEKWQEPPPAKQPKPLPVPDSEPKKKRGGRR 360
           STLAARVDS RGDP+GKTGR  KDEI KKIEKWQEPPPAKQPKPLPVPDSEPKKKRGGRR
Sbjct: 301 STLAARVDSIRGDPSGKTGRSLKDEIHKKIEKWQEPPPAKQPKPLPVPDSEPKKKRGGRR 360

Query: 361 LRKMKERYATTEMRKLANRMQFGVPEESSLGDGLGEGYGMLGQAGSGKLRVSAAQSKLAA 420
           LRKMKERYA T+MRKLANRMQFG+PEESSLGDGLGEGYGMLGQAGSGKLRVSA QSKLAA
Sbjct: 361 LRKMKERYAITDMRKLANRMQFGIPEESSLGDGLGEGYGMLGQAGSGKLRVSAGQSKLAA 420

Query: 421 KVVKKFKEKRYGSSGATSGLTSSLAFTPVQGIELSNPQAHMNQLGSGTQSTYFSETGTFS 480
           KV KKFKEK YGSSGATSGLTSSLAFTPVQGIELSNPQAH +QLGSGTQSTYFSETGTFS
Sbjct: 421 KVAKKFKEKSYGSSGATSGLTSSLAFTPVQGIELSNPQAHAHQLGSGTQSTYFSETGTFS 480

Query: 481 KIRKN 485
           KI+KN
Sbjct: 481 KIQKN 484

[Close]
BLAST of CmaCh18G008060 vs. TrEMBL
Match: A0A0S3TBB0_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.11G202200 PE=4 SV=1)

HSP 1 Score: 803.1 bits (2073), Expect = 1.8e-229
Identity = 422/484 (87.19%), Postives = 458/484 (94.63%), Query Frame = 1 

Query: 1   MATLADSFLADLDELSD-EDNFPDEEDVDAENMEEDIDGDLADLESLNYDDLDNVSKLQK 60
           MATLADSFLADLDELSD E   P++ DVDA +MEED+DGDLADLE+LNYDDLD+VSKLQK
Sbjct: 1   MATLADSFLADLDELSDNEAEIPEDNDVDAADMEEDVDGDLADLENLNYDDLDSVSKLQK 60

Query: 61  SQRYSDIMQKVEDALQKDSNISNQGLVLEDDPEYQLIVECNALSVDIENEIIIIHNFIRD 120
           +QRY D++QKVE+AL+  S++S QG+ LEDDPEYQLIV+CNALSVDIENEI+IIHNFIRD
Sbjct: 61  TQRYIDVIQKVEEALKMGSDVSTQGVDLEDDPEYQLIVDCNALSVDIENEIVIIHNFIRD 120

Query: 121 KYRLKFPELESLVHHPIDYARVVKKIGNEMDLTLVDLEGLLPSAVIMVVSVTASTTSGKP 180
           KYRLKFPELESLVHHPIDYARVVKKIGNEMDLTLVDLEGLLPSA+IMVVSVTASTT+GKP
Sbjct: 121 KYRLKFPELESLVHHPIDYARVVKKIGNEMDLTLVDLEGLLPSAIIMVVSVTASTTTGKP 180

Query: 181 LPEEILQKTIDACDRALALDSAKKMVLNFVESRMGYIAPNLSAIVGSAVAAKLMGTAGGL 240
           LPEE+L KT++ACDRAL LDSAKK VL+FVESRMGYIAPNLSAIVGSAVAAKLMGTAGGL
Sbjct: 181 LPEEVLSKTVEACDRALDLDSAKKKVLDFVESRMGYIAPNLSAIVGSAVAAKLMGTAGGL 240

Query: 241 ASLAKMPACNVQLLGAKKKNLAGFSTATSQFRLGYIEQTEIFQSTPPHLKMRACRLVSAK 300
            SLAKMPACNVQLLGAKKKNLAGFSTATSQFR+GY+EQTEIFQ+TPP L+MRACRL++AK
Sbjct: 241 TSLAKMPACNVQLLGAKKKNLAGFSTATSQFRVGYLEQTEIFQTTPPSLRMRACRLLAAK 300

Query: 301 STLAARVDSTRGDPTGKTGRVFKDEILKKIEKWQEPPPAKQPKPLPVPDSEPKKKRGGRR 360
           STLAARVDS RGDP+G TGR FKDEI KKIEKWQEPPPAKQPKPLPVPDSEPKKKRGGRR
Sbjct: 301 STLAARVDSIRGDPSGNTGRAFKDEIHKKIEKWQEPPPAKQPKPLPVPDSEPKKKRGGRR 360

Query: 361 LRKMKERYATTEMRKLANRMQFGVPEESSLGDGLGEGYGMLGQAGSGKLRVSAAQSKLAA 420
           LRKMKERYA T+MRKLANRMQFGVPEESSLGDGLGEGYGMLGQAGSGKLRVS  QSKLAA
Sbjct: 361 LRKMKERYAITDMRKLANRMQFGVPEESSLGDGLGEGYGMLGQAGSGKLRVSIGQSKLAA 420

Query: 421 KVVKKFKEKRYGSSGATSGLTSSLAFTPVQGIELSNPQAHMNQLGSGTQSTYFSETGTFS 480
           KV K+FKEK YGSSGATSGLTSSLAFTPVQGIEL+NPQAH +QLGSGTQSTYFSETGTFS
Sbjct: 421 KVAKRFKEKNYGSSGATSGLTSSLAFTPVQGIELTNPQAHAHQLGSGTQSTYFSETGTFS 480

Query: 481 KIRK 484
           +I++
Sbjct: 481 RIKR 484

[Close]
BLAST of CmaCh18G008060 vs. TrEMBL
Match: A0A0B0PVX3_GOSAR (U4/U6 small nuclear ribonucleoprotein Prp31 OS=Gossypium arboreum GN=F383_04031 PE=4 SV=1)

HSP 1 Score: 803.1 bits (2073), Expect = 1.8e-229
Identity = 424/484 (87.60%), Postives = 457/484 (94.42%), Query Frame = 1 

Query: 1   MATLADSFLADLDELSD-EDNFPDEEDVDAENMEEDIDGDLADLESLNYDDLDNVSKLQK 60
           MATLADSFLADLDELSD E +  DEE+ D  NMEEDIDGDLAD+E+LNYDDLD+VSKLQK
Sbjct: 1   MATLADSFLADLDELSDNEADVLDEENNDVANMEEDIDGDLADIETLNYDDLDSVSKLQK 60

Query: 61  SQRYSDIMQKVEDALQKDSNISNQGLVLEDDPEYQLIVECNALSVDIENEIIIIHNFIRD 120
           SQRY DIMQKVEDAL+K S+ISNQG+VLEDDPEYQLIV+CN LSVDIENEI+IIHNFIRD
Sbjct: 61  SQRYIDIMQKVEDALEKGSHISNQGMVLEDDPEYQLIVDCNGLSVDIENEIVIIHNFIRD 120

Query: 121 KYRLKFPELESLVHHPIDYARVVKKIGNEMDLTLVDLEGLLPSAVIMVVSVTASTTSGKP 180
           KYRLKFPELESLVHHPIDYARVVKKIGNEMDLTLVDLEGLLPSA+IMVVSVTASTTSGKP
Sbjct: 121 KYRLKFPELESLVHHPIDYARVVKKIGNEMDLTLVDLEGLLPSAIIMVVSVTASTTSGKP 180

Query: 181 LPEEILQKTIDACDRALALDSAKKMVLNFVESRMGYIAPNLSAIVGSAVAAKLMGTAGGL 240
           LPE++LQKT+DACDRALALD+AKK VL+FVESRMGYIAPNLS IVGSAVAAKLMGTAGGL
Sbjct: 181 LPEDVLQKTVDACDRALALDTAKKKVLDFVESRMGYIAPNLSTIVGSAVAAKLMGTAGGL 240

Query: 241 ASLAKMPACNVQLLGAKKKNLAGFSTATSQFRLGYIEQTEIFQSTPPHLKMRACRLVSAK 300
           ++LAKMPACNVQLLGAKKK LAGFSTATSQFR+GYIEQTEIFQ+TPP L+ RACRL+++K
Sbjct: 241 SALAKMPACNVQLLGAKKKTLAGFSTATSQFRVGYIEQTEIFQTTPPALRSRACRLLASK 300

Query: 301 STLAARVDSTRGDPTGKTGRVFKDEILKKIEKWQEPPPAKQPKPLPVPDSEPKKKRGGRR 360
           +TLAAR+DSTRGDP G  G+  K+EI KKIEKWQEPPPAKQPKPLPVPDSEPKKKRGGRR
Sbjct: 301 ATLAARIDSTRGDPLGNAGKTLKEEIHKKIEKWQEPPPAKQPKPLPVPDSEPKKKRGGRR 360

Query: 361 LRKMKERYATTEMRKLANRMQFGVPEESSLGDGLGEGYGMLGQAGSGKLRVSAAQSKLAA 420
           LRKMKERYA T+MRKLANRMQFGVPEESSLGDGLGEGYGMLGQAGSGKLRVS  QSKLAA
Sbjct: 361 LRKMKERYAITDMRKLANRMQFGVPEESSLGDGLGEGYGMLGQAGSGKLRVSIGQSKLAA 420

Query: 421 KVVKKFKEKRYGSSGATSGLTSSLAFTPVQGIELSNPQAHMNQLGSGTQSTYFSETGTFS 480
           KV KKFKEK YGSSGATSGLTSSLAFTPVQGIEL+NPQAH +QLGSGTQSTYFSETGTFS
Sbjct: 421 KVAKKFKEKNYGSSGATSGLTSSLAFTPVQGIELTNPQAHAHQLGSGTQSTYFSETGTFS 480

Query: 481 KIRK 484
           KI++
Sbjct: 481 KIKR 484

[Close]
BLAST of CmaCh18G008060 vs. TAIR10
Match: AT1G60170.1 (AT1G60170.1 pre-mRNA processing ribonucleoprotein binding region-containing protein)

HSP 1 Score: 692.6 bits (1786), Expect = 1.8e-199
Identity = 373/485 (76.91%), Postives = 421/485 (86.80%), Query Frame = 1 

Query: 1   MATLADSFLADLDELSDEDNFPDEEDVDAENMEEDIDGDLADLESLNYDDLDNVSKLQKS 60
           MATL DSFLADLDELSD +   DE D D    EED+D D+ADLE+LNYDDLDNVSKLQKS
Sbjct: 1   MATLEDSFLADLDELSDNEAELDENDGDVGKEEEDVDMDMADLETLNYDDLDNVSKLQKS 60

Query: 61  QRYSDIMQKVEDALQKDSNISNQGLVLEDDPEYQLIVECNALSVDIENEIIIIHNFIRDK 120
           QRY+DIM KVE+AL KDS+ + +G VLEDDPEY+LIV+CN LSVDIENEI+I+HNFI+DK
Sbjct: 61  QRYADIMHKVEEALGKDSDGAEKGTVLEDDPEYKLIVDCNQLSVDIENEIVIVHNFIKDK 120

Query: 121 YRLKFPELESLVHHPIDYARVVKKIGNEMDLTLVDLEGLLPSAVIMVVSVTASTTSGKPL 180
           Y+LKF ELESLVHHPIDYA VVKKIGNE DL LVDL  LLPSA+IMVVSVTA TT G  L
Sbjct: 121 YKLKFQELESLVHHPIDYACVVKKIGNETDLALVDLADLLPSAIIMVVSVTALTTKGSAL 180

Query: 181 PEEILQKTIDACDRALALDSAKKMVLNFVESRMGYIAPNLSAIVGSAVAAKLMGTAGGLA 240
           PE++LQK ++ACDRAL LDSA+K VL FVES+MG IAPNLSAIVGSAVAAKLMGTAGGL+
Sbjct: 181 PEDVLQKVLEACDRALDLDSARKKVLEFVESKMGSIAPNLSAIVGSAVAAKLMGTAGGLS 240

Query: 241 SLAKMPACNVQLLGAKKKNLAGFSTATSQFRLGYIEQTEIFQSTPPHLKMRACRLVSAKS 300
           +LAKMPACNVQ+LG K+KNLAGFS+ATSQ R+GY+EQTEI+QSTPP L+ RA RLV+AKS
Sbjct: 241 ALAKMPACNVQVLGHKRKNLAGFSSATSQSRVGYLEQTEIYQSTPPGLQARAGRLVAAKS 300

Query: 301 TLAARVDSTRGDPTGKTGRVFKDEILKKIEKWQEPPPAKQPKPLPVPDSEPKKKRGGRRL 360
           TLAARVD+TRGDP G +G+ F++EI KKIEKWQEPPPA+QPKPLPVPDSEPKK+RGGRRL
Sbjct: 301 TLAARVDATRGDPLGISGKAFREEIRKKIEKWQEPPPARQPKPLPVPDSEPKKRRGGRRL 360

Query: 361 RKMKERYATTEMRKLANRMQFGVPEESSLGDGLGEGYGMLGQAGSGKLRVSAAQSKLA-- 420
           RKMKERY  T+MRKLANRM FG PEESSLGDGLGEGYGMLGQAGS +LRVS+  SKL   
Sbjct: 361 RKMKERYQVTDMRKLANRMAFGTPEESSLGDGLGEGYGMLGQAGSNRLRVSSVPSKLKIN 420

Query: 421 AKVVKKFKEKRYGSSGATSGLTSSLAFTPVQGIELSNPQAHMNQLGSGTQSTYFSETGTF 480
           AKV KK KE++Y     TSGLTSSLAFTPVQGIEL NPQ  +  LGSGTQSTYFSE+GTF
Sbjct: 421 AKVAKKLKERQYAGGATTSGLTSSLAFTPVQGIELCNPQQALG-LGSGTQSTYFSESGTF 480

Query: 481 SKIRK 484
           SK++K
Sbjct: 481 SKLKK 484

[Close]
BLAST of CmaCh18G008060 vs. TAIR10
Match: AT1G70400.3 (AT1G70400.3 FUNCTIONS IN: molecular_function unknown)

HSP 1 Score: 204.1 bits (518), Expect = 1.9e-52
Identity = 113/165 (68.48%), Postives = 133/165 (80.61%), Query Frame = 1 

Query: 39  DLADLESLNYDDLDNVSKLQKSQRYSDIMQKVEDALQKDSNISNQGLVLEDDPEYQLIVE 98
           D+ +L +L YDDLD+VSKLQKS+RY+DIMQ+VE+AL+        G VLE     +LIV+
Sbjct: 2   DMTELNTLTYDDLDSVSKLQKSRRYADIMQQVEEALE--------GSVLEYK---KLIVD 61

Query: 99  CNALSVDIENEIIIIHNFIRDKYRLKFPELESLVHHPIDYARVVKKIGNEMDLTLVDLEG 158
           C  L VDIENEI+I+ NFIRDKYR+KF ELE LV HPIDYARVVK+IGNEMDL LVDLEG
Sbjct: 62  CKQLLVDIENEIVIVQNFIRDKYRVKFQELELLVPHPIDYARVVKRIGNEMDLKLVDLEG 121

Query: 159 LLPSAVIMVVSVTASTTSGKPLPEEILQKTIDACDRALALDSAKK 204
           LLPSA+IMV+ VTA TT G  LPE++L KTIDACDRAL LDSA+K
Sbjct: 122 LLPSAMIMVLLVTALTTKGNQLPEDVLLKTIDACDRALDLDSARK 155

[Close]
BLAST of CmaCh18G008060 vs. TAIR10
Match: AT3G05060.1 (AT3G05060.1 NOP56-like pre RNA processing ribonucleoprotein)

HSP 1 Score: 100.5 bits (249), Expect = 3.0e-21
Identity = 69/239 (28.87%), Postives = 118/239 (49.37%), Query Frame = 1 

Query: 79  NISNQGLVLEDDPEYQLIVECNALSVDIENEIIIIHNFIRDKYRLKFPELESLVHHPIDY 138
           +++   L    D    +I++   L  D++ E+      +R+ Y   FPEL  ++   I Y
Sbjct: 144 SLARYKLKFSSDKVDTMIIQAIGLLDDLDKELNTYAMRVREWYGWHFPELAKIISDNILY 203

Query: 139 ARVVKKIGNEMDLTLVDLEGLLPSAVIMVVSVTASTTSGKPLPEEILQKTIDACDRALAL 198
           A+ VK +GN ++   +D   +L   +   +   A  + G  + +  L    + CD+ L+L
Sbjct: 204 AKSVKLMGNRVNAAKLDFSEILADEIEADLKDAAVISMGTEVSDLDLLHIRELCDQVLSL 263

Query: 199 DSAKKMVLNFVESRMGYIAPNLSAIVGSAVAAKLMGTAGGLASLAKMPACNVQLLGAKKK 258
              +  + ++++SRM  IAPNL+A+VG  V A+L+   G L +L+K P   VQ+LGA+K 
Sbjct: 264 SEYRAQLYDYLKSRMNTIAPNLTALVGELVGARLISHGGSLLNLSKQPGSTVQILGAEKA 323

Query: 259 NLAGFSTATSQFRLGYIEQTEIFQSTPPHLKMRACRLVSAKSTLAARVDSTRGDPTGKT 318
                 T  +  + G I    +     P  K +  R ++AK+ LA RVD+  GD    T
Sbjct: 324 LFRALKTKHATPKYGLIFHASLVGQAAPKHKGKISRSLAAKTVLAIRVDAL-GDSQDNT 381

[Close]
BLAST of CmaCh18G008060 vs. TAIR10
Match: AT5G27120.1 (AT5G27120.1 NOP56-like pre RNA processing ribonucleoprotein)

HSP 1 Score: 97.8 bits (242), Expect = 1.9e-20
Identity = 79/285 (27.72%), Postives = 136/285 (47.72%), Query Frame = 1 

Query: 79  NISNQGLVLEDDPEYQLIVECNALSVDIENEIIIIHNFIRDKYRLKFPELESLVHHPIDY 138
           +++   L    D    +I++   L  D++ E+      +R+ +   FPEL  +V   I Y
Sbjct: 143 SLARYKLKFSSDKVDTMIIQAIGLLDDLDKELNTYAMRVREWFGWHFPELAKIVQDNILY 202

Query: 139 ARVVKKIGNEMDLTLVDLEGLLPSAVIMVVSVTASTTSGKPLPEEILQKTIDACDRALAL 198
           A+ VK +GN ++   +D   +L   +   +   A  + G  + +  L    + CD+ L+L
Sbjct: 203 AKAVKLMGNRINAAKLDFSEILADEIEAELKEAAVISMGTEVSDLDLLHIRELCDQVLSL 262

Query: 199 DSAKKMVLNFVESRMGYIAPNLSAIVGSAVAAKLMGTAGGLASLAKMPACNVQLLGAKKK 258
              +  + ++++SRM  IAPNL+A+VG  V A+L+   G L +LAK P   VQ+LGA+K 
Sbjct: 263 AEYRAQLYDYLKSRMNTIAPNLTALVGELVGARLISHGGSLLNLAKQPGSTVQILGAEKA 322

Query: 259 NLAGFSTATSQFRLGYIEQTEIFQSTPPHLKMRACRLVSAKSTLAARVDS---TRGDPTG 318
                 T  +  + G I    +     P  K +  R ++AKS LA R D+   ++ +  G
Sbjct: 323 LFRALKTKHATPKYGLIFHASVVGQAAPKNKGKISRSLAAKSVLAIRCDALGDSQDNTMG 382

Query: 319 KTGRVFKDEILKKIE---KWQEPPPAKQPKPLPVPDSEPKKKRGG 358
              R+  +  L+ +E     +    AK    + V D + KK  GG
Sbjct: 383 VENRLKLEARLRTLEGKDLGRLSGSAKGKPKIEVYDKDKKKGSGG 427

[Close]
BLAST of CmaCh18G008060 vs. TAIR10
Match: AT5G27140.1 (AT5G27140.1 NOP56-like pre RNA processing ribonucleoprotein)

HSP 1 Score: 85.5 bits (210), Expect = 9.8e-17
Identity = 85/347 (24.50%), Postives = 168/347 (48.41%), Query Frame = 1 

Query: 35  DIDGDLADLESLNYDDLDNVSKLQKSQRYSDIMQKVED------ALQKDSNISNQGLVLE 94
           DI  +  D+E ++ D +  + +  +SQ  ++++  ++D      +L+    ++   L + 
Sbjct: 66  DIITEKLDIECVHNDAVMELLRGVRSQ-LTELLSGLDDNDLAPVSLELSHILARYKLKIT 125

Query: 95  DDPEYQLIVECNALSVDIENEIIIIHNFIRDKYRLKFPELESLVHHPIDYARVVKKIGNE 154
            D    +I+   +L  D++ E+      + + Y L FPEL ++V   I YA+VVK +GN 
Sbjct: 126 SDKT--MIILSISLLDDLDKELNTYTTSVCELYGLHFPELANIVQDNILYAKVVKLMGNR 185

Query: 155 MDLTLVDLEGLLPSAVIMVVSVTASTTSGKPLPEEILQKTIDACDRALALDSAKKMVLNF 214
           ++   +D   +L   V   +   +  ++   + +  L    + CD+ L++   K ++ + 
Sbjct: 186 INAATLDFSEILADEVEAELKEASMVSTRTEVSDLDLMHIQELCDQVLSIAEDKTLLCDD 245

Query: 215 VESRMGYIAPNLSAIVGSAVAAKLMGTAGGLASLAKMPACNVQLLGAKKKNLAGFSTATS 274
           ++++M  IAPNL+A+VG  V A+L+   G L +L+K+P   +Q+LGA+K       T  +
Sbjct: 246 LKNKMNKIAPNLTALVGELVGARLISHCGSLWNLSKLPWSTIQILGAEKTLYKALKTKQA 305

Query: 275 QFRLGYIEQTEIFQSTPPHLKMRACRLVSAKSTLAARVD---STRGDPTGKTGRVFKDEI 334
             + G I    + +   P  K +  R ++AKS LA R D   + + +  G   R+  +  
Sbjct: 306 TPKYGLIYHAPLVRQAAPENKGKIARSLAAKSALAIRCDAFGNGQDNTMGVESRLKLEAR 365

Query: 335 LKKIE-------KWQEPPPAKQPKPLPVPDSEPKKKRGGRRLRKMKE 366
           L+ +E       + +E    K  K     + EPK +   ++ +K  E
Sbjct: 366 LRNLEGGDLGACEEEEEVNDKDTKKEADDEEEPKTEECSKKRKKEAE 409

[Close]
BLAST of CmaCh18G008060 vs. NCBI nr
Match: gi|659090826|ref|XP_008446223.1| (PREDICTED: U4/U6 small nuclear ribonucleoprotein Prp31 isoform X1 [Cucumis melo])

HSP 1 Score: 866.3 bits (2237), Expect = 2.5e-248
Identity = 462/484 (95.45%), Postives = 472/484 (97.52%), Query Frame = 1 

Query: 1   MATLADSFLADLDELSDEDNFPDEEDVDAENMEEDIDGDLADLESLNYDDLDNVSKLQKS 60
           MATLADSFLADLDELSDED F  E   DAENMEEDIDGDLADLESLNY+DLD+VSKLQK+
Sbjct: 1   MATLADSFLADLDELSDEDKFQGEAGADAENMEEDIDGDLADLESLNYEDLDSVSKLQKT 60

Query: 61  QRYSDIMQKVEDALQKDSNISNQGLVLEDDPEYQLIVECNALSVDIENEIIIIHNFIRDK 120
           QRY+DIMQKVEDALQ DSNISNQG VLEDDPEYQLIVECNALSVDIENEIIIIHNFIRDK
Sbjct: 61  QRYNDIMQKVEDALQTDSNISNQGFVLEDDPEYQLIVECNALSVDIENEIIIIHNFIRDK 120

Query: 121 YRLKFPELESLVHHPIDYARVVKKIGNEMDLTLVDLEGLLPSAVIMVVSVTASTTSGKPL 180
           YRLKFPELESLVHHPIDYARVVKKIGNE+DLTLVDLEGLLPSAVIMVVSVTASTTSGKPL
Sbjct: 121 YRLKFPELESLVHHPIDYARVVKKIGNEVDLTLVDLEGLLPSAVIMVVSVTASTTSGKPL 180

Query: 181 PEEILQKTIDACDRALALDSAKKMVLNFVESRMGYIAPNLSAIVGSAVAAKLMGTAGGLA 240
           PEEILQKTIDACDRALALDSAKKMVL FVESRMG+IAPNLSAIVGSAVAAKLMGTAGGL 
Sbjct: 181 PEEILQKTIDACDRALALDSAKKMVLTFVESRMGHIAPNLSAIVGSAVAAKLMGTAGGLV 240

Query: 241 SLAKMPACNVQLLGAKKKNLAGFSTATSQFRLGYIEQTEIFQSTPPHLKMRACRLVSAKS 300
           +LAKMPACNVQLLGAKKKNLAGFSTATSQFR+GYIEQTEIFQSTPP LKMRACRL+SAKS
Sbjct: 241 ALAKMPACNVQLLGAKKKNLAGFSTATSQFRVGYIEQTEIFQSTPPPLKMRACRLISAKS 300

Query: 301 TLAARVDSTRGDPTGKTGRVFKDEILKKIEKWQEPPPAKQPKPLPVPDSEPKKKRGGRRL 360
           TLAARVDST GDPTGKTGRVFKDEILKKIEKWQEPPPAKQPKPLPVPDSEPKKKRGGRRL
Sbjct: 301 TLAARVDSTMGDPTGKTGRVFKDEILKKIEKWQEPPPAKQPKPLPVPDSEPKKKRGGRRL 360

Query: 361 RKMKERYATTEMRKLANRMQFGVPEESSLGDGLGEGYGMLGQAGSGKLRVSAAQSKLAAK 420
           RKMKERYATTEMRKLANRMQFGVPEESSLGDGLGEGYGMLGQAGSGKLRVSAAQSKLAAK
Sbjct: 361 RKMKERYATTEMRKLANRMQFGVPEESSLGDGLGEGYGMLGQAGSGKLRVSAAQSKLAAK 420

Query: 421 VVKKFKEKRYGSSGATSGLTSSLAFTPVQGIELSNPQAHMNQLGSGTQSTYFSETGTFSK 480
           VVKKFKEKRYGSSGATSGLTSSLAFTPVQGIELSNPQAH+NQLGSGTQSTYFSETGTFSK
Sbjct: 421 VVKKFKEKRYGSSGATSGLTSSLAFTPVQGIELSNPQAHLNQLGSGTQSTYFSETGTFSK 480

Query: 481 IRKN 485
           IRKN
Sbjct: 481 IRKN 484

[Close]
BLAST of CmaCh18G008060 vs. NCBI nr
Match: gi|778705094|ref|XP_011655634.1| (PREDICTED: U4/U6 small nuclear ribonucleoprotein Prp31 isoform X1 [Cucumis sativus])

HSP 1 Score: 865.1 bits (2234), Expect = 5.6e-248
Identity = 461/484 (95.25%), Postives = 472/484 (97.52%), Query Frame = 1 

Query: 1   MATLADSFLADLDELSDEDNFPDEEDVDAENMEEDIDGDLADLESLNYDDLDNVSKLQKS 60
           MAT ADSFLADLDELSDED F  E   DAENMEEDIDGDLADLESLNY+DLD+VSKLQK+
Sbjct: 1   MATFADSFLADLDELSDEDKFQGEAGADAENMEEDIDGDLADLESLNYEDLDSVSKLQKT 60

Query: 61  QRYSDIMQKVEDALQKDSNISNQGLVLEDDPEYQLIVECNALSVDIENEIIIIHNFIRDK 120
           QRY+DIMQKVEDALQ DSNISNQG VLEDDPEYQLIVECNALSVDIENEIIIIHNFIRDK
Sbjct: 61  QRYNDIMQKVEDALQTDSNISNQGFVLEDDPEYQLIVECNALSVDIENEIIIIHNFIRDK 120

Query: 121 YRLKFPELESLVHHPIDYARVVKKIGNEMDLTLVDLEGLLPSAVIMVVSVTASTTSGKPL 180
           YRLKFPELESLVHHPIDYARVVKKIGNE+DLTLVDLEGLLPSAVIMVVSVTASTTSGKPL
Sbjct: 121 YRLKFPELESLVHHPIDYARVVKKIGNEVDLTLVDLEGLLPSAVIMVVSVTASTTSGKPL 180

Query: 181 PEEILQKTIDACDRALALDSAKKMVLNFVESRMGYIAPNLSAIVGSAVAAKLMGTAGGLA 240
           PEEILQKTIDACDRALALDSAKKMVL FVESRMG+IAPNLSAIVGSAVAAKLMGTAGGLA
Sbjct: 181 PEEILQKTIDACDRALALDSAKKMVLTFVESRMGHIAPNLSAIVGSAVAAKLMGTAGGLA 240

Query: 241 SLAKMPACNVQLLGAKKKNLAGFSTATSQFRLGYIEQTEIFQSTPPHLKMRACRLVSAKS 300
           +LAKMPACNVQLLGAK+KNLAGFSTATSQFR+GYIEQTEIFQSTPP LKMRACRL+SAKS
Sbjct: 241 ALAKMPACNVQLLGAKRKNLAGFSTATSQFRVGYIEQTEIFQSTPPPLKMRACRLISAKS 300

Query: 301 TLAARVDSTRGDPTGKTGRVFKDEILKKIEKWQEPPPAKQPKPLPVPDSEPKKKRGGRRL 360
           TLAARVDST GDPTGKTGRVFKDEILKKIEKWQEPPPAKQPKPLPVPDSEPKKKRGGRRL
Sbjct: 301 TLAARVDSTMGDPTGKTGRVFKDEILKKIEKWQEPPPAKQPKPLPVPDSEPKKKRGGRRL 360

Query: 361 RKMKERYATTEMRKLANRMQFGVPEESSLGDGLGEGYGMLGQAGSGKLRVSAAQSKLAAK 420
           RKMKERYATTEMRKLANRMQFGVPEESSLGDGLGEGYGMLGQAGSGKLRVSAAQSKLAAK
Sbjct: 361 RKMKERYATTEMRKLANRMQFGVPEESSLGDGLGEGYGMLGQAGSGKLRVSAAQSKLAAK 420

Query: 421 VVKKFKEKRYGSSGATSGLTSSLAFTPVQGIELSNPQAHMNQLGSGTQSTYFSETGTFSK 480
           VVKKFKEKRYGSSGATSGLTSSLAFTPVQGIELSNPQAH+NQLGSGTQSTYFSETGTFSK
Sbjct: 421 VVKKFKEKRYGSSGATSGLTSSLAFTPVQGIELSNPQAHLNQLGSGTQSTYFSETGTFSK 480

Query: 481 IRKN 485
           IRKN
Sbjct: 481 IRKN 484

[Close]
BLAST of CmaCh18G008060 vs. NCBI nr
Match: gi|778705097|ref|XP_011655635.1| (PREDICTED: U4/U6 small nuclear ribonucleoprotein Prp31 isoform X2 [Cucumis sativus])

HSP 1 Score: 826.6 bits (2134), Expect = 2.2e-236
Identity = 437/453 (96.47%), Postives = 448/453 (98.90%), Query Frame = 1 

Query: 32  MEEDIDGDLADLESLNYDDLDNVSKLQKSQRYSDIMQKVEDALQKDSNISNQGLVLEDDP 91
           MEEDIDGDLADLESLNY+DLD+VSKLQK+QRY+DIMQKVEDALQ DSNISNQG VLEDDP
Sbjct: 1   MEEDIDGDLADLESLNYEDLDSVSKLQKTQRYNDIMQKVEDALQTDSNISNQGFVLEDDP 60

Query: 92  EYQLIVECNALSVDIENEIIIIHNFIRDKYRLKFPELESLVHHPIDYARVVKKIGNEMDL 151
           EYQLIVECNALSVDIENEIIIIHNFIRDKYRLKFPELESLVHHPIDYARVVKKIGNE+DL
Sbjct: 61  EYQLIVECNALSVDIENEIIIIHNFIRDKYRLKFPELESLVHHPIDYARVVKKIGNEVDL 120

Query: 152 TLVDLEGLLPSAVIMVVSVTASTTSGKPLPEEILQKTIDACDRALALDSAKKMVLNFVES 211
           TLVDLEGLLPSAVIMVVSVTASTTSGKPLPEEILQKTIDACDRALALDSAKKMVL FVES
Sbjct: 121 TLVDLEGLLPSAVIMVVSVTASTTSGKPLPEEILQKTIDACDRALALDSAKKMVLTFVES 180

Query: 212 RMGYIAPNLSAIVGSAVAAKLMGTAGGLASLAKMPACNVQLLGAKKKNLAGFSTATSQFR 271
           RMG+IAPNLSAIVGSAVAAKLMGTAGGLA+LAKMPACNVQLLGAK+KNLAGFSTATSQFR
Sbjct: 181 RMGHIAPNLSAIVGSAVAAKLMGTAGGLAALAKMPACNVQLLGAKRKNLAGFSTATSQFR 240

Query: 272 LGYIEQTEIFQSTPPHLKMRACRLVSAKSTLAARVDSTRGDPTGKTGRVFKDEILKKIEK 331
           +GYIEQTEIFQSTPP LKMRACRL+SAKSTLAARVDST GDPTGKTGRVFKDEILKKIEK
Sbjct: 241 VGYIEQTEIFQSTPPPLKMRACRLISAKSTLAARVDSTMGDPTGKTGRVFKDEILKKIEK 300

Query: 332 WQEPPPAKQPKPLPVPDSEPKKKRGGRRLRKMKERYATTEMRKLANRMQFGVPEESSLGD 391
           WQEPPPAKQPKPLPVPDSEPKKKRGGRRLRKMKERYATTEMRKLANRMQFGVPEESSLGD
Sbjct: 301 WQEPPPAKQPKPLPVPDSEPKKKRGGRRLRKMKERYATTEMRKLANRMQFGVPEESSLGD 360

Query: 392 GLGEGYGMLGQAGSGKLRVSAAQSKLAAKVVKKFKEKRYGSSGATSGLTSSLAFTPVQGI 451
           GLGEGYGMLGQAGSGKLRVSAAQSKLAAKVVKKFKEKRYGSSGATSGLTSSLAFTPVQGI
Sbjct: 361 GLGEGYGMLGQAGSGKLRVSAAQSKLAAKVVKKFKEKRYGSSGATSGLTSSLAFTPVQGI 420

Query: 452 ELSNPQAHMNQLGSGTQSTYFSETGTFSKIRKN 485
           ELSNPQAH+NQLGSGTQSTYFSETGTFSKIRKN
Sbjct: 421 ELSNPQAHLNQLGSGTQSTYFSETGTFSKIRKN 453

[Close]
BLAST of CmaCh18G008060 vs. NCBI nr
Match: gi|659090828|ref|XP_008446224.1| (PREDICTED: U4/U6 small nuclear ribonucleoprotein Prp31 isoform X2 [Cucumis melo])

HSP 1 Score: 826.2 bits (2133), Expect = 2.9e-236
Identity = 437/453 (96.47%), Postives = 447/453 (98.68%), Query Frame = 1 

Query: 32  MEEDIDGDLADLESLNYDDLDNVSKLQKSQRYSDIMQKVEDALQKDSNISNQGLVLEDDP 91
           MEEDIDGDLADLESLNY+DLD+VSKLQK+QRY+DIMQKVEDALQ DSNISNQG VLEDDP
Sbjct: 1   MEEDIDGDLADLESLNYEDLDSVSKLQKTQRYNDIMQKVEDALQTDSNISNQGFVLEDDP 60

Query: 92  EYQLIVECNALSVDIENEIIIIHNFIRDKYRLKFPELESLVHHPIDYARVVKKIGNEMDL 151
           EYQLIVECNALSVDIENEIIIIHNFIRDKYRLKFPELESLVHHPIDYARVVKKIGNE+DL
Sbjct: 61  EYQLIVECNALSVDIENEIIIIHNFIRDKYRLKFPELESLVHHPIDYARVVKKIGNEVDL 120

Query: 152 TLVDLEGLLPSAVIMVVSVTASTTSGKPLPEEILQKTIDACDRALALDSAKKMVLNFVES 211
           TLVDLEGLLPSAVIMVVSVTASTTSGKPLPEEILQKTIDACDRALALDSAKKMVL FVES
Sbjct: 121 TLVDLEGLLPSAVIMVVSVTASTTSGKPLPEEILQKTIDACDRALALDSAKKMVLTFVES 180

Query: 212 RMGYIAPNLSAIVGSAVAAKLMGTAGGLASLAKMPACNVQLLGAKKKNLAGFSTATSQFR 271
           RMG+IAPNLSAIVGSAVAAKLMGTAGGL +LAKMPACNVQLLGAKKKNLAGFSTATSQFR
Sbjct: 181 RMGHIAPNLSAIVGSAVAAKLMGTAGGLVALAKMPACNVQLLGAKKKNLAGFSTATSQFR 240

Query: 272 LGYIEQTEIFQSTPPHLKMRACRLVSAKSTLAARVDSTRGDPTGKTGRVFKDEILKKIEK 331
           +GYIEQTEIFQSTPP LKMRACRL+SAKSTLAARVDST GDPTGKTGRVFKDEILKKIEK
Sbjct: 241 VGYIEQTEIFQSTPPPLKMRACRLISAKSTLAARVDSTMGDPTGKTGRVFKDEILKKIEK 300

Query: 332 WQEPPPAKQPKPLPVPDSEPKKKRGGRRLRKMKERYATTEMRKLANRMQFGVPEESSLGD 391
           WQEPPPAKQPKPLPVPDSEPKKKRGGRRLRKMKERYATTEMRKLANRMQFGVPEESSLGD
Sbjct: 301 WQEPPPAKQPKPLPVPDSEPKKKRGGRRLRKMKERYATTEMRKLANRMQFGVPEESSLGD 360

Query: 392 GLGEGYGMLGQAGSGKLRVSAAQSKLAAKVVKKFKEKRYGSSGATSGLTSSLAFTPVQGI 451
           GLGEGYGMLGQAGSGKLRVSAAQSKLAAKVVKKFKEKRYGSSGATSGLTSSLAFTPVQGI
Sbjct: 361 GLGEGYGMLGQAGSGKLRVSAAQSKLAAKVVKKFKEKRYGSSGATSGLTSSLAFTPVQGI 420

Query: 452 ELSNPQAHMNQLGSGTQSTYFSETGTFSKIRKN 485
           ELSNPQAH+NQLGSGTQSTYFSETGTFSKIRKN
Sbjct: 421 ELSNPQAHLNQLGSGTQSTYFSETGTFSKIRKN 453

[Close]
BLAST of CmaCh18G008060 vs. NCBI nr
Match: gi|802718753|ref|XP_012085347.1| (PREDICTED: U4/U6 small nuclear ribonucleoprotein Prp31 [Jatropha curcas])

HSP 1 Score: 825.1 bits (2130), Expect = 6.4e-236
Identity = 434/484 (89.67%), Postives = 467/484 (96.49%), Query Frame = 1 

Query: 1   MATLADSFLADLDELSDED-NFPDEEDVDAENMEEDIDGDLADLESLNYDDLDNVSKLQK 60
           MATLADSFLADLDELSD D +  +E+DVDA NMEED+DGD+AD+E+LNYDDLD+VSKLQK
Sbjct: 1   MATLADSFLADLDELSDNDADLVEEDDVDAGNMEEDVDGDMADIEALNYDDLDSVSKLQK 60

Query: 61  SQRYSDIMQKVEDALQKDSNISNQGLVLEDDPEYQLIVECNALSVDIENEIIIIHNFIRD 120
           +QRY+DIMQKVEDAL+K S+ISNQG+VLEDDPEYQLIVECNALSVDIENEIIIIHNFIRD
Sbjct: 61  TQRYNDIMQKVEDALEKGSDISNQGMVLEDDPEYQLIVECNALSVDIENEIIIIHNFIRD 120

Query: 121 KYRLKFPELESLVHHPIDYARVVKKIGNEMDLTLVDLEGLLPSAVIMVVSVTASTTSGKP 180
           KYRLKFPELESLVHHPIDYARVVKKIGNEMDLTLVDLEGLLPSA+IMVVSVTASTTSGKP
Sbjct: 121 KYRLKFPELESLVHHPIDYARVVKKIGNEMDLTLVDLEGLLPSAIIMVVSVTASTTSGKP 180

Query: 181 LPEEILQKTIDACDRALALDSAKKMVLNFVESRMGYIAPNLSAIVGSAVAAKLMGTAGGL 240
           LPEE+LQKTIDACDRALALDSAKK VL+FVESRMGYIAPNLSAIVGSAVAAKLMGTAGGL
Sbjct: 181 LPEEVLQKTIDACDRALALDSAKKKVLDFVESRMGYIAPNLSAIVGSAVAAKLMGTAGGL 240

Query: 241 ASLAKMPACNVQLLGAKKKNLAGFSTATSQFRLGYIEQTEIFQSTPPHLKMRACRLVSAK 300
           ++LAKMPACNVQLLGAKKKNLAGFSTATSQFR+GYIEQTE+FQ+TPP L+MRACRL++AK
Sbjct: 241 SALAKMPACNVQLLGAKKKNLAGFSTATSQFRVGYIEQTEVFQTTPPALRMRACRLLAAK 300

Query: 301 STLAARVDSTRGDPTGKTGRVFKDEILKKIEKWQEPPPAKQPKPLPVPDSEPKKKRGGRR 360
           STLAARVDSTRGDP+G+TGR  ++EI KKIEKWQEPPPAKQPKPLPVPDSEPKKKRGGRR
Sbjct: 301 STLAARVDSTRGDPSGRTGRALREEIHKKIEKWQEPPPAKQPKPLPVPDSEPKKKRGGRR 360

Query: 361 LRKMKERYATTEMRKLANRMQFGVPEESSLGDGLGEGYGMLGQAGSGKLRVSAAQSKLAA 420
           LRKMKERYA T+MRKLANRMQFGVPEESSLGDGLGEGYGMLGQAGSGKLRVS  QSKLAA
Sbjct: 361 LRKMKERYAVTDMRKLANRMQFGVPEESSLGDGLGEGYGMLGQAGSGKLRVSIGQSKLAA 420

Query: 421 KVVKKFKEKRYGSSGATSGLTSSLAFTPVQGIELSNPQAHMNQLGSGTQSTYFSETGTFS 480
           KV KKFKEK YGSSGATSGLTSSLAFTPVQGIEL+NPQAH +QLGSGTQSTYFSETGTFS
Sbjct: 421 KVAKKFKEKNYGSSGATSGLTSSLAFTPVQGIELTNPQAHAHQLGSGTQSTYFSETGTFS 480

Query: 481 KIRK 484
           KI++
Sbjct: 481 KIKR 484

The following BLAST results are available for this feature:
BLAST of CmaCh18G008060 vs. Swiss-Prot
Match NameE-valueIdentityDescription
PRP31_MOUSE4.8e-10647.18U4/U6 small nuclear ribonucleoprotein Prp31 OS=Mus musculus GN=Prpf31 PE=1 SV=3[more]
PRP31_XENLA1.4e-10547.88U4/U6 small nuclear ribonucleoprotein Prp31 OS=Xenopus laevis GN=prpf31 PE=2 SV=... [more]
PRP31_HUMAN4.0e-10547.18U4/U6 small nuclear ribonucleoprotein Prp31 OS=Homo sapiens GN=PRPF31 PE=1 SV=2[more]
PRP31_XENTR3.4e-10447.27U4/U6 small nuclear ribonucleoprotein Prp31 OS=Xenopus tropicalis GN=prpf31 PE=2... [more]
PRP31_DANRE1.6e-10145.22U4/U6 small nuclear ribonucleoprotein Prp31 OS=Danio rerio GN=prpf31 PE=2 SV=1[more]
BLAST of CmaCh18G008060 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KSD2_CUCSA3.9e-24895.25Uncharacterized protein OS=Cucumis sativus GN=Csa_5G602130 PE=4 SV=1[more]
A0A067K434_JATCU4.5e-23689.67Uncharacterized protein OS=Jatropha curcas GN=JCGZ_17722 PE=4 SV=1[more]
A2Q2G1_MEDTR1.4e-22988.04Pre-mRNA processing ribonucleoprotein, binding region; NOSIC OS=Medicago truncat... [more]
A0A0S3TBB0_PHAAN1.8e-22987.19Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.11G202200 PE=... [more]
A0A0B0PVX3_GOSAR1.8e-22987.60U4/U6 small nuclear ribonucleoprotein Prp31 OS=Gossypium arboreum GN=F383_04031 ... [more]
BLAST of CmaCh18G008060 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G60170.11.8e-19976.91 pre-mRNA processing ribonucleoprotein binding region-containing prot... [more]
AT1G70400.31.9e-5268.48 FUNCTIONS IN: molecular_function unknown[more]
AT3G05060.13.0e-2128.87 NOP56-like pre RNA processing ribonucleoprotein[more]
AT5G27120.11.9e-2027.72 NOP56-like pre RNA processing ribonucleoprotein[more]
AT5G27140.19.8e-1724.50 NOP56-like pre RNA processing ribonucleoprotein[more]
BLAST of CmaCh18G008060 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659090826|ref|XP_008446223.1|2.5e-24895.45PREDICTED: U4/U6 small nuclear ribonucleoprotein Prp31 isoform X1 [Cucumis melo][more]
gi|778705094|ref|XP_011655634.1|5.6e-24895.25PREDICTED: U4/U6 small nuclear ribonucleoprotein Prp31 isoform X1 [Cucumis sativ... [more]
gi|778705097|ref|XP_011655635.1|2.2e-23696.47PREDICTED: U4/U6 small nuclear ribonucleoprotein Prp31 isoform X2 [Cucumis sativ... [more]
gi|659090828|ref|XP_008446224.1|2.9e-23696.47PREDICTED: U4/U6 small nuclear ribonucleoprotein Prp31 isoform X2 [Cucumis melo][more]
gi|802718753|ref|XP_012085347.1|6.4e-23689.67PREDICTED: U4/U6 small nuclear ribonucleoprotein Prp31 [Jatropha curcas][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR002687Nop_dom
IPR012976NOSIC
IPR019175Prp31_C
IPR027105Prp31
Vocabulary: Biological Process
TermDefinition
GO:0000398mRNA splicing, via spliceosome
GO:0000244spliceosomal tri-snRNP complex assembly
Vocabulary: Cellular Component
TermDefinition
GO:0046540U4/U6 x U5 tri-snRNP complex
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006346 methylation-dependent chromatin silencing
biological_process GO:0009409 response to cold
biological_process GO:0009845 seed germination
biological_process GO:0000244 spliceosomal tri-snRNP complex assembly
biological_process GO:0000398 mRNA splicing, via spliceosome
cellular_component GO:0046540 U4/U6 x U5 tri-snRNP complex
cellular_component GO:0019013 viral nucleocapsid
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh18G008060.1CmaCh18G008060.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002687Nop domainPFAMPF01798Nopcoord: 103..331
score: 1.3
IPR002687Nop domainPROFILEPS51358NOPcoord: 216..334
score: 3
IPR002687Nop domainunknownSSF89124Nop domaincoord: 88..334
score: 1.83
IPR012976NOSICSMARTSM00931NOSIC_2coord: 95..147
score: 6.4
IPR019175Prp31 C-terminalPFAMPF09785Prp31_Ccoord: 339..456
score: 1.1
IPR027105U4/U6 small nuclear ribonucleoprotein Prp31PANTHERPTHR13904PRE-MRNA SPLICING FACTOR PRP31coord: 2..484
score: 7.6E

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmaCh18G008060Cucsa.285960Cucumber (Gy14) v1cgycmaB0799
CmaCh18G008060Cla010097Watermelon (97103) v1cmawmB375
CmaCh18G008060Csa5G602130Cucumber (Chinese Long) v2cmacuB413
CmaCh18G008060MELO3C012005Melon (DHL92) v3.5.1cmameB354
CmaCh18G008060ClCG05G025230Watermelon (Charleston Gray)cmawcgB366
CmaCh18G008060CSPI05G22770Wild cucumber (PI 183967)cmacpiB419
CmaCh18G008060CmoCh04G018050Cucurbita moschata (Rifu)cmacmoB422
CmaCh18G008060Lsi04G005360Bottle gourd (USVL1VR-Ls)cmalsiB383
CmaCh18G008060Cp4.1LG09g04950Cucurbita pepo (Zucchini)cmacpeB415
CmaCh18G008060Cp4.1LG01g15270Cucurbita pepo (Zucchini)cmacpeB431
CmaCh18G008060MELO3C012005.2Melon (DHL92) v3.6.1cmamedB411
CmaCh18G008060CsaV3_5G031650Cucumber (Chinese Long) v3cmacucB0495
CmaCh18G008060Cla97C05G107380Watermelon (97103) v2cmawmbB426
CmaCh18G008060CsGy5G022290Cucumber (Gy14) v2cgybcmaB623
CmaCh18G008060Carg14353Silver-seed gourdcarcmaB0337
CmaCh18G008060Carg14460Silver-seed gourdcarcmaB1012
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
CmaCh18G008060CmaCh04G017210Cucurbita maxima (Rimu)cmacmaB404
The following block(s) are covering this gene:
GeneOrganismBlock
CmaCh18G008060Silver-seed gourdcarcmaB0883
CmaCh18G008060Cucumber (Chinese Long) v3cmacucB0484
CmaCh18G008060Wax gourdcmawgoB0537
CmaCh18G008060Wax gourdcmawgoB0543
CmaCh18G008060Cucurbita maxima (Rimu)cmacmaB177
CmaCh18G008060Cucurbita moschata (Rifu)cmacmoB406
CmaCh18G008060Wild cucumber (PI 183967)cmacpiB410
CmaCh18G008060Bottle gourd (USVL1VR-Ls)cmalsiB377
CmaCh18G008060Cucumber (Gy14) v2cgybcmaB102
CmaCh18G008060Melon (DHL92) v3.6.1cmamedB419