CmaCh18G005910 (gene) Cucurbita maxima (Rimu)

Overview
NameCmaCh18G005910
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu))
Description30S ribosomal protein S7, chloroplastic
LocationCma_Chr18 : 4244119 .. 4247375 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACTGGAAAGAAAACGGTGGAAAAAGGGAAGAAGCCCATTGCTTCTTCTAACACTCCTACTCTAATGACTTCCGACAGCTATGCGATGGACACATGTTTCACATTGGTGACCAAGTCTAAAGCGAGACTTTCTAAAAAACAAGTAGAGGTTATCACTCCAACGAGGCCTTCTGCCTCTTTAACACGGTCATCTGTCGTTACTCCATCGAGACCCACTGTCTCTTCCACTTCAAAGGGACCTTCTGTCCCCTCAACCTACTCGGATGCGATTGTTCCCGTTCGATTTTCTCCAGTTCCTGAAATTAGGACCTACTTTCAAAAATCTGTGTCCATACCAGAAGCTCTGGTAGAACCAAAATACGACGACCCAAAGATCAGCGAGGTCGTCAAGAAAGCTTATCCGATAGGATTCTTTTATATCCTGGAAGATCTTCATAAGATCAGAAGGTTTTATGAATTCATTTTAGTCGACACAAATTCCGTCGAAATTACTCATATTCTGAGCGTGATGATCCTTCAAAAAGCTGAGTACTCAAAATTAAAAAATTTCAAAGTCATGAATCTGACGTACTGGAATCAAGATTCGTACACGGAAAAGACTTTGTCAAAACCGTTTGTTCCTCACCATTTTTGTTTCTTTAATTTTTATCTTTCTTTATTATTTTGTTTTCTACTTTTTCCACTTTCATCAAAATTATTGATGAATATGGAGTTGTGTGTATGTACATTAATACGTTAATTTGGATGTAAATTATTTGTAAATTAAGCTAGGATACACAACTCAGGTAAATATAAGTTCTCAAGTCATTAAGCGTATGATGGCATTCTTTTTAGGGAGAAATGAATAACAAAAATCAACTAAATACAAAACAACTATTTTTAACCATAAACTTACGAAGCAAAATAAATTTAAAAAAAAGACAGTTTCAATGTCATCTGGGTCACTATTGATAGATTGACCAAGATAACCCATTTGATTCCAAGTAAGACCACTTATCAAGTAGACTAATGGGCCAAATTATACGTAAAAGTGAAAGTCTGCTTGCACAGCGTACCAATGTCCATTGTGTCAGATTGAGATGCTAATTTTACTTTTAATTTCTTGAAAATTTTTGAAAAAGTGATAGGAACGCAACTCAAGTTTAGTACTACGTTTCATTCTCAGACAGATGGGTAGACAGAGAGGTTTAATAAGACCCTGGAGGATATGTTGAGGGCATGTTATAGACTTTACAAGTTGCTGGGTTGAGCACCCGACCCTTATGGAATTCGCCTACAACAATAAATATTTATTCAGATAACACCATTCGAAGCTTTGTATGGACGGAGGTGCAAAACCCCAATATTCTAGGAGGAGGTAGGCAAGAAAACATGTCGATCCAAGTTATGTGCATTAAGTTAAGAAAAACGGAAGAAAATAGATTGAAAAAGCGAAGAAGCTAACATTCTCGAACTTTGGAAACATGTAGGAGAGAGAAAATAATCGCCACACTTCGCCCAACGTATGGAGGGGCGTGGCGGAGCTGACGAACGACACGTGGTAGTGTTCCATTAGAGAAACGTGTTTGGCCTACGTGTCGAAATGCTTCAATGCGCGAGGACTCGGTCGACCTGGAAACGTAACCCTCATGCAAAACGAACTACATCCGAGAACCACCAAACCAACCTATGGTCCAACTCGATGACTCACCACTCCTTGTGCGCCACGTGTCACAACCACAAACTTTAAAGGGCAAGTCTGCGTCTGCTAAGATTCAAAGTGCACCATTGCCCTCACACTGCCCGCTTGAGTCCAACACATGGGGGTGCGTGCAAGCGTGTAGGAGAGCGTGGGGGCACGTAAAGCCCCTATTCTCACCCCTTTTTTGCTCGATTGCCAATTCTGCACCCCGATTTCAATGTTAATGTTGTTTTATTGTGACTTAGGTGCCTATAGAGAAAATTGGTAATTTTAACTCCTCTACGACTAATCAACCAAAATTTGGGAAGGCACGCGTCAGACAAGTAAGCCACCATTTAGATTTCCACGCGCAGTACTTGTAGGAAACAGAATAAGCATGCATGTTGTCAAACTGATTATCCTAGCTAACTAGACCTAACATAATAGTATGTAAGCCATGAAAATTAACTAAATAAGAAAATCAATGATACCTATATAGGATTGGATATGATTCACTTTAGAATGAGAATGTGGTATTGTATGCATGATAAAGAAGGGAGGGAAATTTGTGAAGTTTGTGCTCTATGTGAAAATGGATGTTATCTTCCCATCGAGCATGTTTGTTAATATTGCATGAACTGCGAGCCTATGATTGCTTGTGTTGTCTTTCTTGTTGTGAATAGGAAGAAACTGTGAGCCTAGACTATGGCCCTTAAGACAATGTAAGCTAGACAAAGACCTAGAACGAGATACCTCTAAAATATCGTGCATTCAGGCCTGCAAAATGATGACCAGCAGACTCTGACCCCAGTATTCCAGACCACAATAGGTTTGAGAGTCCTTGCACGAGAATCATAAAGATGAATGAGTCCAAGTCTAAGCAACCATGATCCACCCCTAAAAAGACCTGGTAGGAAACAATAGTAACTGTAGACAACCGAGGTAGCCCACCAGACTTGTGCAACGTGAATAGTGCCACCAGAGCCTCCATTTCCCTCTCTGCTCTGATACCGTACTGTCGAGACTGAACACCGATATTGAGATTGATGAGCTAGGCAGAGCTAGACATGGTAGTGTAATTTGTGCCCCAACCTATTGGTGATAACTAAGGGGTCTCCTGAACAAGACCCCTAAGCCGTAGAAACCTATCCCTGTGCGGGGGAGCATGGGACAAAGTAGGATGACTTAGTAGCTTATCGGCACGCAGGGGACCACAACCTCTCGATTTTAGTGGTAATATGGTCCCGTGGGAGGGTTGTCAACTAACGTCTAAGGATGTTCAGAGAGTAATACTGGTTTAGATCCAGCCATATTGTTCCCTTAGTTTTACTTATGAGGTTGCGCCTCATCCAAAGACACTATTCATCCACTACATCAGATAGGCAAGCCTCAAAATTTGTAAAAAAATAGAGTTGCAACTTAGTCCGCACTTCCTAGAACTCCGAGACAAGGTCGTGAATACTTATTAAGATATGGCTTTCAAATTAAGTTCCGAATTAGTGGATGCTGCCAAACGGAGTGGCGATGCCATACGTAAAAAGGAAGAGACTCATAGAATGGCAGAGGCAAATAGAGCTTTTGCACATTTTCGTTAA

mRNA sequence

ATGACTGGAAAGAAAACGGTGGAAAAAGGGAAGAAGCCCATTGCTTCTTCTAACACTCCTACTCTAATGACTTCCGACAGCTATGCGATGGACACATGTTTCACATTGGTGACCAAGTCTAAAGCGAGACTTTCTAAAAAACAAGTAGAGGTTATCACTCCAACGAGGCCTTCTGCCTCTTTAACACGGTCATCTGTCGTTACTCCATCGAGACCCACTGTCTCTTCCACTTCAAAGGGACCTTCTGTCCCCTCAACCTACTCGGATGCGATTGTTCCCGTTCGATTTTCTCCAGTTCCTGAAATTAGGACCTACTTTCAAAAATCTGTGTCCATACCAGAAGCTCTGGTAGAACCAAAATACGACGACCCAAAGATCAGCGAGGTCGTCAAGAAAGCTTATCCGATAGGATTCTTTTATATCCTGGAAGATCTTCATAAGATCAGAAGTTCCGAATTAGTGGATGCTGCCAAACGGAGTGGCGATGCCATACGTAAAAAGGAAGAGACTCATAGAATGGCAGAGGCAAATAGAGCTTTTGCACATTTTCGTTAA

Coding sequence (CDS)

ATGACTGGAAAGAAAACGGTGGAAAAAGGGAAGAAGCCCATTGCTTCTTCTAACACTCCTACTCTAATGACTTCCGACAGCTATGCGATGGACACATGTTTCACATTGGTGACCAAGTCTAAAGCGAGACTTTCTAAAAAACAAGTAGAGGTTATCACTCCAACGAGGCCTTCTGCCTCTTTAACACGGTCATCTGTCGTTACTCCATCGAGACCCACTGTCTCTTCCACTTCAAAGGGACCTTCTGTCCCCTCAACCTACTCGGATGCGATTGTTCCCGTTCGATTTTCTCCAGTTCCTGAAATTAGGACCTACTTTCAAAAATCTGTGTCCATACCAGAAGCTCTGGTAGAACCAAAATACGACGACCCAAAGATCAGCGAGGTCGTCAAGAAAGCTTATCCGATAGGATTCTTTTATATCCTGGAAGATCTTCATAAGATCAGAAGTTCCGAATTAGTGGATGCTGCCAAACGGAGTGGCGATGCCATACGTAAAAAGGAAGAGACTCATAGAATGGCAGAGGCAAATAGAGCTTTTGCACATTTTCGTTAA

Protein sequence

MTGKKTVEKGKKPIASSNTPTLMTSDSYAMDTCFTLVTKSKARLSKKQVEVITPTRPSASLTRSSVVTPSRPTVSSTSKGPSVPSTYSDAIVPVRFSPVPEIRTYFQKSVSIPEALVEPKYDDPKISEVVKKAYPIGFFYILEDLHKIRSSELVDAAKRSGDAIRKKEETHRMAEANRAFAHFR
Homology
[Close]
BLAST of CmaCh18G005910 vs. Swiss-Prot
Match: RR7_LEOCS (30S ribosomal protein S7, chloroplastic OS=Leopoldia comosa GN=rps7 PE=3 SV=1)

HSP 1 Score: 65.9 bits (159), Expect = 5.4e-10
Identity = 34/35 (97.14%), Postives = 34/35 (97.14%), Query Frame = 1 

Query: 150 SSELVDAAKRSGDAIRKKEETHRMAEANRAFAHFR 185
           SSELVDAAK SGDAIRKKEETHRMAEANRAFAHFR
Sbjct: 121 SSELVDAAKGSGDAIRKKEETHRMAEANRAFAHFR 155

[Close]
BLAST of CmaCh18G005910 vs. Swiss-Prot
Match: RR7_BARVE (30S ribosomal protein S7, chloroplastic OS=Barbarea verna GN=rps7-A PE=3 SV=1)

HSP 1 Score: 65.9 bits (159), Expect = 5.4e-10
Identity = 34/35 (97.14%), Postives = 34/35 (97.14%), Query Frame = 1 

Query: 150 SSELVDAAKRSGDAIRKKEETHRMAEANRAFAHFR 185
           SSELVDAAK SGDAIRKKEETHRMAEANRAFAHFR
Sbjct: 121 SSELVDAAKGSGDAIRKKEETHRMAEANRAFAHFR 155

[Close]
BLAST of CmaCh18G005910 vs. Swiss-Prot
Match: RR7_BETVU (30S ribosomal protein S7, chloroplastic OS=Beta vulgaris GN=rps7 PE=3 SV=1)

HSP 1 Score: 65.9 bits (159), Expect = 5.4e-10
Identity = 34/35 (97.14%), Postives = 34/35 (97.14%), Query Frame = 1 

Query: 150 SSELVDAAKRSGDAIRKKEETHRMAEANRAFAHFR 185
           SSELVDAAK SGDAIRKKEETHRMAEANRAFAHFR
Sbjct: 121 SSELVDAAKGSGDAIRKKEETHRMAEANRAFAHFR 155

[Close]
BLAST of CmaCh18G005910 vs. Swiss-Prot
Match: RR7_TOBAC (30S ribosomal protein S7, chloroplastic OS=Nicotiana tabacum GN=rps7-A PE=3 SV=1)

HSP 1 Score: 65.9 bits (159), Expect = 5.4e-10
Identity = 34/35 (97.14%), Postives = 34/35 (97.14%), Query Frame = 1 

Query: 150 SSELVDAAKRSGDAIRKKEETHRMAEANRAFAHFR 185
           SSELVDAAK SGDAIRKKEETHRMAEANRAFAHFR
Sbjct: 121 SSELVDAAKGSGDAIRKKEETHRMAEANRAFAHFR 155

[Close]
BLAST of CmaCh18G005910 vs. Swiss-Prot
Match: RR7_BRANA (30S ribosomal protein S7, chloroplastic OS=Brassica napus GN=rps7 PE=3 SV=1)

HSP 1 Score: 65.9 bits (159), Expect = 5.4e-10
Identity = 34/35 (97.14%), Postives = 34/35 (97.14%), Query Frame = 1 

Query: 150 SSELVDAAKRSGDAIRKKEETHRMAEANRAFAHFR 185
           SSELVDAAK SGDAIRKKEETHRMAEANRAFAHFR
Sbjct: 121 SSELVDAAKGSGDAIRKKEETHRMAEANRAFAHFR 155

[Close]
BLAST of CmaCh18G005910 vs. TrEMBL
Match: E5GCE6_CUCME (Putative uncharacterized protein OS=Cucumis melo subsp. melo PE=4 SV=1)

HSP 1 Score: 89.7 bits (221), Expect = 3.9e-15
Identity = 63/151 (41.72%), Postives = 91/151 (60.26%), Query Frame = 1 

Query: 6   TVEKGKKPIASSNT-PTLMTSDSYAMDTCFTLVTKSKARLSK----KQVEVITPTRPSAS 65
           T  KG +P +SSN+ P+ M++  Y MD  FT+VT+S++RLS        E  TP RPS +
Sbjct: 15  TSSKGHRPSSSSNSEPSPMSAYQYTMDLGFTIVTRSRSRLSSIWIGSPTESSTPPRPSVN 74

Query: 66  LTR-SSVVTPSRPTVSSTSKGPSV--PSTYSDAI-VPVRFSPVPEIRTYFQKSVSIPEAL 125
           L R S  V   RP  S +S   S   P+TYS A+ +  RF P PEI++YFQKS+ + + +
Sbjct: 75  LIRPSGGVIQMRPPASPSSNRESSTPPTTYSQAVTLDKRFVPRPEIKSYFQKSIVVYDPI 134

Query: 126 VEPKYDDPKISEVVKKAYPIGFFYILEDLHK 148
           +EP+Y    + E+V K +P  F ++ EDL K
Sbjct: 135 IEPEYQSLTLEEMVSKIFPKDFNFLPEDLKK 165

[Close]
BLAST of CmaCh18G005910 vs. TrEMBL
Match: A0A0E3XDK5_9ROSI (30S ribosomal protein S7, chloroplastic OS=Quercus aquifolioides GN=rps7 PE=3 SV=1)

HSP 1 Score: 66.6 bits (161), Expect = 3.5e-08
Identity = 34/35 (97.14%), Postives = 34/35 (97.14%), Query Frame = 1 

Query: 150 SSELVDAAKRSGDAIRKKEETHRMAEANRAFAHFR 185
           SSELVDAAK SGDAIRKKEETHRMAEANRAFAHFR
Sbjct: 121 SSELVDAAKESGDAIRKKEETHRMAEANRAFAHFR 155

[Close]
BLAST of CmaCh18G005910 vs. TrEMBL
Match: A9QB82_ELAOL (Ribosomal protein S7 (Fragment) OS=Elaeis oleifera GN=rps7 PE=3 SV=1)

HSP 1 Score: 65.9 bits (159), Expect = 6.1e-08
Identity = 34/35 (97.14%), Postives = 34/35 (97.14%), Query Frame = 1 

Query: 150 SSELVDAAKRSGDAIRKKEETHRMAEANRAFAHFR 185
           SSELVDAAK SGDAIRKKEETHRMAEANRAFAHFR
Sbjct: 121 SSELVDAAKGSGDAIRKKEETHRMAEANRAFAHFR 155

[Close]
BLAST of CmaCh18G005910 vs. TrEMBL
Match: A0A0B4MRU6_9APIA (30S ribosomal protein S7, chloroplastic OS=Panax notoginseng GN=rps7 PE=3 SV=1)

HSP 1 Score: 65.9 bits (159), Expect = 6.1e-08
Identity = 34/35 (97.14%), Postives = 34/35 (97.14%), Query Frame = 1 

Query: 150 SSELVDAAKRSGDAIRKKEETHRMAEANRAFAHFR 185
           SSELVDAAK SGDAIRKKEETHRMAEANRAFAHFR
Sbjct: 121 SSELVDAAKGSGDAIRKKEETHRMAEANRAFAHFR 155

[Close]
BLAST of CmaCh18G005910 vs. TrEMBL
Match: A0A0D5CAA2_9SOLA (30S ribosomal protein S7, chloroplastic OS=Vassobia dichotoma GN=rps7 PE=3 SV=1)

HSP 1 Score: 65.9 bits (159), Expect = 6.1e-08
Identity = 34/35 (97.14%), Postives = 34/35 (97.14%), Query Frame = 1 

Query: 150 SSELVDAAKRSGDAIRKKEETHRMAEANRAFAHFR 185
           SSELVDAAK SGDAIRKKEETHRMAEANRAFAHFR
Sbjct: 121 SSELVDAAKGSGDAIRKKEETHRMAEANRAFAHFR 155

[Close]
BLAST of CmaCh18G005910 vs. TAIR10
Match: ATCG01240.1 (ATCG01240.1 ribosomal protein S7)

HSP 1 Score: 65.9 bits (159), Expect = 3.1e-11
Identity = 34/35 (97.14%), Postives = 34/35 (97.14%), Query Frame = 1 

Query: 150 SSELVDAAKRSGDAIRKKEETHRMAEANRAFAHFR 185
           SSELVDAAK SGDAIRKKEETHRMAEANRAFAHFR
Sbjct: 121 SSELVDAAKGSGDAIRKKEETHRMAEANRAFAHFR 155

[Close]
BLAST of CmaCh18G005910 vs. TAIR10
Match: ATCG00900.1 (ATCG00900.1 Ribosomal protein S7p/S5e family protein)

HSP 1 Score: 65.9 bits (159), Expect = 3.1e-11
Identity = 34/35 (97.14%), Postives = 34/35 (97.14%), Query Frame = 1 

Query: 150 SSELVDAAKRSGDAIRKKEETHRMAEANRAFAHFR 185
           SSELVDAAK SGDAIRKKEETHRMAEANRAFAHFR
Sbjct: 121 SSELVDAAKGSGDAIRKKEETHRMAEANRAFAHFR 155

[Close]
BLAST of CmaCh18G005910 vs. NCBI nr
Match: gi|307136323|gb|ADN34145.1| (hypothetical protein [Cucumis melo subsp. melo])

HSP 1 Score: 89.7 bits (221), Expect = 5.6e-15
Identity = 63/151 (41.72%), Postives = 91/151 (60.26%), Query Frame = 1 

Query: 6   TVEKGKKPIASSNT-PTLMTSDSYAMDTCFTLVTKSKARLSK----KQVEVITPTRPSAS 65
           T  KG +P +SSN+ P+ M++  Y MD  FT+VT+S++RLS        E  TP RPS +
Sbjct: 15  TSSKGHRPSSSSNSEPSPMSAYQYTMDLGFTIVTRSRSRLSSIWIGSPTESSTPPRPSVN 74

Query: 66  LTR-SSVVTPSRPTVSSTSKGPSV--PSTYSDAI-VPVRFSPVPEIRTYFQKSVSIPEAL 125
           L R S  V   RP  S +S   S   P+TYS A+ +  RF P PEI++YFQKS+ + + +
Sbjct: 75  LIRPSGGVIQMRPPASPSSNRESSTPPTTYSQAVTLDKRFVPRPEIKSYFQKSIVVYDPI 134

Query: 126 VEPKYDDPKISEVVKKAYPIGFFYILEDLHK 148
           +EP+Y    + E+V K +P  F ++ EDL K
Sbjct: 135 IEPEYQSLTLEEMVSKIFPKDFNFLPEDLKK 165

[Close]
BLAST of CmaCh18G005910 vs. NCBI nr
Match: gi|659098578|ref|XP_008450208.1| (PREDICTED: putative protein TPRXL [Cucumis melo])

HSP 1 Score: 76.3 bits (186), Expect = 6.4e-11
Identity = 55/125 (44.00%), Postives = 78/125 (62.40%), Query Frame = 1 

Query: 6   TVEKGKKPIASSN-TPTLMTSDSYAMDTCFTLVTKSKARLSKKQV----EVITPTRPSAS 65
           T  KG +P +SSN  P+ M++D YAMD  FT +T+S++R S  ++    E  TP RPSA+
Sbjct: 15  TSSKGNRPSSSSNFAPSPMSADQYAMDLEFTTITRSRSRSSGIRIGSPTESSTPPRPSAN 74

Query: 66  LTR-SSVVTPSRPTVSSTSKGPSV--PSTYSDAIVP-VRFSPVPEIRTYFQKSVSIPEAL 122
           L R S  V   RP  S +S   S   P+TYS  + P  RF P P+I++YFQKS+ + + +
Sbjct: 75  LIRLSDGVVQMRPHASPSSNRESSTPPTTYSHTVTPDKRFVPRPKIKSYFQKSIVVYDPI 134

[Close]
BLAST of CmaCh18G005910 vs. NCBI nr
Match: gi|813428144|ref|YP_009133097.1| (ribosomal protein S7 (chloroplast) [Quercus aquifolioides])

HSP 1 Score: 66.6 bits (161), Expect = 5.1e-08
Identity = 34/35 (97.14%), Postives = 34/35 (97.14%), Query Frame = 1 

Query: 150 SSELVDAAKRSGDAIRKKEETHRMAEANRAFAHFR 185
           SSELVDAAK SGDAIRKKEETHRMAEANRAFAHFR
Sbjct: 121 SSELVDAAKESGDAIRKKEETHRMAEANRAFAHFR 155

[Close]
BLAST of CmaCh18G005910 vs. NCBI nr
Match: gi|62287243|sp|Q6EM77.1|RR7_PHYAM (RecName: Full=30S ribosomal protein S7, chloroplastic)

HSP 1 Score: 65.9 bits (159), Expect = 8.7e-08
Identity = 34/35 (97.14%), Postives = 34/35 (97.14%), Query Frame = 1 

Query: 150 SSELVDAAKRSGDAIRKKEETHRMAEANRAFAHFR 185
           SSELVDAAK SGDAIRKKEETHRMAEANRAFAHFR
Sbjct: 121 SSELVDAAKGSGDAIRKKEETHRMAEANRAFAHFR 155

[Close]
BLAST of CmaCh18G005910 vs. NCBI nr
Match: gi|966202953|ref|YP_009193118.1| (ribosomal protein S7 (chloroplast) [Inga leiocalycina])

HSP 1 Score: 65.9 bits (159), Expect = 8.7e-08
Identity = 34/35 (97.14%), Postives = 34/35 (97.14%), Query Frame = 1 

Query: 150 SSELVDAAKRSGDAIRKKEETHRMAEANRAFAHFR 185
           SSELVDAAK SGDAIRKKEETHRMAEANRAFAHFR
Sbjct: 121 SSELVDAAKGSGDAIRKKEETHRMAEANRAFAHFR 155

The following BLAST results are available for this feature:
BLAST of CmaCh18G005910 vs. Swiss-Prot
Match NameE-valueIdentityDescription
RR7_LEOCS5.4e-1097.1430S ribosomal protein S7, chloroplastic OS=Leopoldia comosa GN=rps7 PE=3 SV=1[more]
RR7_BARVE5.4e-1097.1430S ribosomal protein S7, chloroplastic OS=Barbarea verna GN=rps7-A PE=3 SV=1[more]
RR7_BETVU5.4e-1097.1430S ribosomal protein S7, chloroplastic OS=Beta vulgaris GN=rps7 PE=3 SV=1[more]
RR7_TOBAC5.4e-1097.1430S ribosomal protein S7, chloroplastic OS=Nicotiana tabacum GN=rps7-A PE=3 SV=1[more]
RR7_BRANA5.4e-1097.1430S ribosomal protein S7, chloroplastic OS=Brassica napus GN=rps7 PE=3 SV=1[more]
BLAST of CmaCh18G005910 vs. TrEMBL
Match NameE-valueIdentityDescription
E5GCE6_CUCME3.9e-1541.72Putative uncharacterized protein OS=Cucumis melo subsp. melo PE=4 SV=1[more]
A0A0E3XDK5_9ROSI3.5e-0897.1430S ribosomal protein S7, chloroplastic OS=Quercus aquifolioides GN=rps7 PE=3 SV... [more]
A9QB82_ELAOL6.1e-0897.14Ribosomal protein S7 (Fragment) OS=Elaeis oleifera GN=rps7 PE=3 SV=1[more]
A0A0B4MRU6_9APIA6.1e-0897.1430S ribosomal protein S7, chloroplastic OS=Panax notoginseng GN=rps7 PE=3 SV=1[more]
A0A0D5CAA2_9SOLA6.1e-0897.1430S ribosomal protein S7, chloroplastic OS=Vassobia dichotoma GN=rps7 PE=3 SV=1[more]
BLAST of CmaCh18G005910 vs. TAIR10
Match NameE-valueIdentityDescription
ATCG01240.13.1e-1197.14ATCG01240.1 ribosomal protein S7[more]
ATCG00900.13.1e-1197.14ATCG00900.1 Ribosomal protein S7p/S5e family protein[more]
BLAST of CmaCh18G005910 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|307136323|gb|ADN34145.1|5.6e-1541.72hypothetical protein [Cucumis melo subsp. melo][more]
gi|659098578|ref|XP_008450208.1|6.4e-1144.00PREDICTED: putative protein TPRXL [Cucumis melo][more]
gi|813428144|ref|YP_009133097.1|5.1e-0897.14ribosomal protein S7 (chloroplast) [Quercus aquifolioides][more]
gi|62287243|sp|Q6EM77.1|RR7_PHYAM8.7e-0897.14RecName: Full=30S ribosomal protein S7, chloroplastic[more]
gi|966202953|ref|YP_009193118.1|8.7e-0897.14ribosomal protein S7 (chloroplast) [Inga leiocalycina][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR000235Ribosomal_S5/S7
IPR023798Ribosomal_S7_dom
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0042254 ribosome biogenesis
biological_process GO:0006412 translation
cellular_component GO:0009507 chloroplast
cellular_component GO:0015935 small ribosomal subunit
molecular_function GO:0019843 rRNA binding
molecular_function GO:0003735 structural constituent of ribosome
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh18G005910.1CmaCh18G005910.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000235Ribosomal protein S5/S7PANTHERPTHR11205RIBOSOMAL PROTEIN S7coord: 150..184
score: 2.4
IPR023798Ribosomal protein S7 domainGENE3DG3DSA:1.10.455.10coord: 150..184
score: 9.7
IPR023798Ribosomal protein S7 domainPFAMPF00177Ribosomal_S7coord: 151..178
score: 3.
IPR023798Ribosomal protein S7 domainunknownSSF47973Ribosomal protein S7coord: 150..184
score: 2.62

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CmaCh18G005910Watermelon (97103) v2cmawmbB402
CmaCh18G005910Watermelon (97103) v2cmawmbB394
CmaCh18G005910Wax gourdcmawgoB0515
CmaCh18G005910Wax gourdcmawgoB0532
CmaCh18G005910Wax gourdcmawgoB0535
CmaCh18G005910Cucurbita maxima (Rimu)cmacmaB216
CmaCh18G005910Cucurbita maxima (Rimu)cmacmaB399
CmaCh18G005910Cucumber (Gy14) v1cgycmaB0040
CmaCh18G005910Cucurbita moschata (Rifu)cmacmoB398
CmaCh18G005910Cucurbita moschata (Rifu)cmacmoB407
CmaCh18G005910Cucurbita moschata (Rifu)cmacmoB419
CmaCh18G005910Cucurbita moschata (Rifu)cmacmoB428
CmaCh18G005910Wild cucumber (PI 183967)cmacpiB428
CmaCh18G005910Cucumber (Chinese Long) v2cmacuB425
CmaCh18G005910Melon (DHL92) v3.5.1cmameB364
CmaCh18G005910Watermelon (Charleston Gray)cmawcgB342
CmaCh18G005910Watermelon (Charleston Gray)cmawcgB349
CmaCh18G005910Watermelon (97103) v1cmawmB389
CmaCh18G005910Cucurbita pepo (Zucchini)cmacpeB415
CmaCh18G005910Cucurbita pepo (Zucchini)cmacpeB419
CmaCh18G005910Cucurbita pepo (Zucchini)cmacpeB438
CmaCh18G005910Bottle gourd (USVL1VR-Ls)cmalsiB367
CmaCh18G005910Bottle gourd (USVL1VR-Ls)cmalsiB369
CmaCh18G005910Cucumber (Gy14) v2cgybcmaB095
CmaCh18G005910Cucumber (Gy14) v2cgybcmaB771
CmaCh18G005910Melon (DHL92) v3.6.1cmamedB414
CmaCh18G005910Melon (DHL92) v3.6.1cmamedB423
CmaCh18G005910Silver-seed gourdcarcmaB0907
CmaCh18G005910Cucumber (Chinese Long) v3cmacucB0509