CmaCh18G005510 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh18G005510
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	Phloem protein 2
Location	Cma_Chr18 : 3592503 .. 3595019 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AGTAGGGGAGGCTTTTTAACACCATGTTTATCACTCAAAATCTTTTTACTTTTTCACGTTAATCTTTCGATTTTCTCAAATATCGTGTTGTTCTTATCCACTAACACCCTTTTTGTTCCATCTTATGAATAGTTAGTTAAGCTAATTTTAAGATACAAACAAGAATACATTGAGGCTCTTAATTTTTGTTGTGGAAGGTTGCAATAATCCAATAATGGAAAAGGGGCCTCACAAAGTACCAGAAGAAGATGCCTTAGACGTGAAAAACAACGAGGTTTGCCCATTCGACAGCCTCTTTGTTTTCTTTTCTTTAAACTATATCGTATGAAACTCAAGATTTTTATCAGTTTTCTAACATTTGATCTGTGGAAGGTCCTAATTTATCCGAGAGGCTTTAACATCACATGGGGCAACGATGATCGCTATTGGAAGAAATTCAACGGGTCAGTTTCTCGATTAAGCTTTTCGATATAGTATACTAATGGTTAAACAAACTCATATCCATTGATTAATGAATGAAAATTAAATTAAAATTTAGATTTATAAATATATTCTTGCAAAAATATTGTTTTTTTAAGCTTTTCCTCAAAGTTTTTATGCTTGTGCTAGAGAGAGCTTTCCATAAAAAATGTTTTGTTCTCCTTTATAAATAATGTTTCGTTCTCCTCATCAATCAATGTGGGATCTCACAATCCACCCCCTTTAGGGTCCAACATCCTTACTGGCACTCTGTTCCCTTCTCCAATCCACCCCCTTCGAAACTCAGCGTTCTTGCTAACATATCGCTTCATGTCCACCCCTTTCGGGCTAAGCCTTTTCGCTGGCACATTGCCCGATGTCTGGCTCTAATACTATTTGTAACGACTCAAGCCCACCATTAACAAATATTGTCCTCTTTTCCATGCCTTTCGAAAGAATGTTTCGTTCTCTTCCCCAACATACGATCTCACATATACAATATTTGATTTTTTGAAATATAAGTGGTACTAAATATAATATTACTAAAATTATTTATTTAAGGATATTTATTAAAATTTATTACAAAATAAACTAAAAAATCTAAAATTTAGTCCCAAAATTAAATTATTTTAATAATTTGACTTGATAAAAATTAATAACTTAATTATTTAAAATTAAATAATGTAATAAAATTGTTGCAAATACCTTAATAGACACGAGACCAAGTGTTAGTAAGAATGCTAGGCCTAAAGGGGTGGATTTGGCGGGGGCTCCAAAGGAAAGAGTGTCAGCGAAGTCGCTGGACCTCGAAAGAGGTGGATTGTGATGTCCTACATTGGTTGGGGATGAGAACAAAAACACCCATTTACAATTTACAAGGGTGTGGAAACCTTCTCCTAGCAAACGCGTTTTAAAGTCTTTCGGGGAAACTAGTATTCTTGGGACAGGTTTTCACACCATTTCTCTTTCTTAACTGATGTGGGATCGCAGAATCCTATGGTTAGCTGAATCCTATGGTTGGATAGCTATCTATTAAGGATTTAATATTATTGTCTACAAATTTGTGTCATTTTTGCAGGGAAAAAAATTGTGCGGCAGAACTGAAGCAAGTTTCATGGCTGGAAGTAGCATGCTCAATTGATAAGAAACTAAAGTATGGGAAGACATATAAAGTGGGTTTCGAAGTGTCATTGAAACCAGATGCGTTTGGATGGAAAGATGTCGATGTTTATGTGATGGCCAAGGTTGGCAAGTCAGGGAAATACAGTTATAGGAAAGTCCATCTTGACAGGGCACCCCTAGGTGAAAAGATACGCATCCCTGATTATTTCAATGAAACCTTAAAAATCAAGGCTATGCGTCCACCATCCAACAAGCATGACGGGAAGCATGACGAGAAGCATGACGAGAAGCATGACGAGAAGCATGACGAGAAGCATGACGAAAAGTCTAACGAGAAGTCTAACGAGAACGACAAGTCTAACCAGAAGCCTAACAAGAATCCTAACGAGAAGTCTAACGAGAAGCCTAGCGAGAAGCCTAACGAGCCTAACGAGAAGTCTAACGAGAAACCTAAGAAGCCTAACGAGAAGTCTAAGAAGTCTAACGAGAAGCCTAACGAGAAGTCGGAATCCCCAGAAATCCATTTTGGTTTGTATGAAGTATGGACTAAGAAGTGGAAGGGAGGGTTGATGATTCATCACGCCTACATTGAGGAGCTCAAACCAGCTGATCCCAAAAATGAAGAGTCCTCCTCTCAACCCCCCGCCGTATCAAACCAATGAGGTTTCCTTGAAGGGTTCCTTAGGGTTGTGGGAAAATGTTAAGGTCCATCGTGAGTTTTATTATTGTTTAGGATAAAGACGGCTTACTATATATATATATCATATTAGACTCCTTATTATACACATGTTAAGGTCCATCATATACTTAGTTTTATTATTGTTTAAGCTAAAAGACGGTTTACTATATATATATATATCATATTAGACTCCTTATTATACACATGTTAAGTTCTATCATATACTTAGTTTTATTATTGTTTAAGCTAAGAGACGG

mRNA sequence

AGTAGGGGAGGCTTTTTAACACCATGTTTATCACTCAAAATCTTTTTACTTTTTCACGTTAATCTTTCGATTTTCTCAAATATCGTGTTGTTCTTATCCACTAACACCCTTTTTGTTCCATCTTATGAATAGTTAGTTAAGCTAATTTTAAGATACAAACAAGAATACATTGAGGCTCTTAATTTTTGTTGTGGAAGGTTGCAATAATCCAATAATGGAAAAGGGGCCTCACAAAGTACCAGAAGAAGATGCCTTAGACGTGAAAAACAACGAGGTCCTAATTTATCCGAGAGGCTTTAACATCACATGGGGCAACGATGATCGCTATTGGAAGAAATTCAACGGGGAAAAAAATTGTGCGGCAGAACTGAAGCAAGTTTCATGGCTGGAAGTAGCATGCTCAATTGATAAGAAACTAAAGTATGGGAAGACATATAAAGTGGGTTTCGAAGTGTCATTGAAACCAGATGCGTTTGGATGGAAAGATGTCGATGTTTATGTGATGGCCAAGGTTGGCAAGTCAGGGAAATACAGTTATAGGAAAGTCCATCTTGACAGGGCACCCCTAGGTGAAAAGATACGCATCCCTGATTATTTCAATGAAACCTTAAAAATCAAGGCTATGCGTCCACCATCCAACAAGCATGACGGGAAGCATGACGAGAAGCATGACGAGAAGCATGACGAGAAGCATGACGAGAAGCATGACGAAAAGTCTAACGAGAAGTCTAACGAGAACGACAAGTCTAACCAGAAGCCTAACAAGAATCCTAACGAGAAGTCTAACGAGAAGCCTAGCGAGAAGCCTAACGAGCCTAACGAGAAGTCTAACGAGAAACCTAAGAAGCCTAACGAGAAGTCTAAGAAGTCTAACGAGAAGCCTAACGAGAAGTCGGAATCCCCAGAAATCCATTTTGGTTTGTATGAAGTATGGACTAAGAAGTGGAAGGGAGGGTTGATGATTCATCACGCCTACATTGAGGAGCTCAAACCAGCTGATCCCAAAAATGAAGAGTCCTCCTCTCAACCCCCCGCCGTATCAAACCAATGAGGTTTCCTTGAAGGGTTCCTTAGGGTTGTGGGAAAATGTTAAGGTCCATCGTGAGTTTTATTATTGTTTAGGATAAAGACGGCTTACTATATATATATATCATATTAGACTCCTTATTATACACATGTTAAGGTCCATCATATACTTAGTTTTATTATTGTTTAAGCTAAAAGACGGTTTACTATATATATATATATCATATTAGACTCCTTATTATACACATGTTAAGTTCTATCATATACTTAGTTTTATTATTGTTTAAGCTAAGAGACGG

Coding sequence (CDS)

ATGGAAAAGGGGCCTCACAAAGTACCAGAAGAAGATGCCTTAGACGTGAAAAACAACGAGGTCCTAATTTATCCGAGAGGCTTTAACATCACATGGGGCAACGATGATCGCTATTGGAAGAAATTCAACGGGGAAAAAAATTGTGCGGCAGAACTGAAGCAAGTTTCATGGCTGGAAGTAGCATGCTCAATTGATAAGAAACTAAAGTATGGGAAGACATATAAAGTGGGTTTCGAAGTGTCATTGAAACCAGATGCGTTTGGATGGAAAGATGTCGATGTTTATGTGATGGCCAAGGTTGGCAAGTCAGGGAAATACAGTTATAGGAAAGTCCATCTTGACAGGGCACCCCTAGGTGAAAAGATACGCATCCCTGATTATTTCAATGAAACCTTAAAAATCAAGGCTATGCGTCCACCATCCAACAAGCATGACGGGAAGCATGACGAGAAGCATGACGAGAAGCATGACGAGAAGCATGACGAGAAGCATGACGAAAAGTCTAACGAGAAGTCTAACGAGAACGACAAGTCTAACCAGAAGCCTAACAAGAATCCTAACGAGAAGTCTAACGAGAAGCCTAGCGAGAAGCCTAACGAGCCTAACGAGAAGTCTAACGAGAAACCTAAGAAGCCTAACGAGAAGTCTAAGAAGTCTAACGAGAAGCCTAACGAGAAGTCGGAATCCCCAGAAATCCATTTTGGTTTGTATGAAGTATGGACTAAGAAGTGGAAGGGAGGGTTGATGATTCATCACGCCTACATTGAGGAGCTCAAACCAGCTGATCCCAAAAATGAAGAGTCCTCCTCTCAACCCCCCGCCGTATCAAACCAATGA

Protein sequence

MEKGPHKVPEEDALDVKNNEVLIYPRGFNITWGNDDRYWKKFNGEKNCAAELKQVSWLEVACSIDKKLKYGKTYKVGFEVSLKPDAFGWKDVDVYVMAKVGKSGKYSYRKVHLDRAPLGEKIRIPDYFNETLKIKAMRPPSNKHDGKHDEKHDEKHDEKHDEKHDEKSNEKSNENDKSNQKPNKNPNEKSNEKPSEKPNEPNEKSNEKPKKPNEKSKKSNEKPNEKSESPEIHFGLYEVWTKKWKGGLMIHHAYIEELKPADPKNEESSSQPPAVSNQ

Homology

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BLAST of CmaCh18G005510 vs. Swiss-Prot
Match: P2A09_ARATH (Protein PHLOEM PROTEIN 2-LIKE A9 OS=Arabidopsis thaliana GN=PP2A9 PE=2 SV=1)

HSP 1 Score: 96.7 bits (239), Expect = 4.3e-19
Identity = 51/127 (40.16%), Postives = 67/127 (52.76%), Query Frame = 1


Query: 6   HKVPEEDALDVKNNEVLIYPRGFNITWGNDDRYWKKFNGEKNCAAELKQVSWLEVACSID 65
           HK   +   D      +  P G N  WG D RYW     E    AELK VSWLEV  S D
Sbjct: 9   HKADSKMEQDNNRKAWISQPSGLNFVWGGDSRYWV-IPKEPRMPAELKMVSWLEVTGSFD 68

Query: 66  KKLKYGKTYKVGFEVSLKPDAFGWKDVDVYVMAKVGKSGKYSYRKVHLDRAPLG------ 125
            K++ GKTY++GF++S KPDA GW    V++ AK+GK GK  ++++       G      
Sbjct: 69  -KIEPGKTYRIGFKISFKPDATGWDKAPVFMSAKIGKKGKTVWKRIKSVSQNFGILKGGS 128

Query: 126 EKIRIPD 127
           E + IPD
Sbjct: 129 EPVNIPD 133

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BLAST of CmaCh18G005510 vs. TrEMBL
Match: A0A0A0M0V4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G703570 PE=4 SV=1)

HSP 1 Score: 129.0 bits (323), Expect = 8.8e-27
Identity = 67/148 (45.27%), Postives = 93/148 (62.84%), Query Frame = 1


Query: 5   PHKVPEEDALDV-KNNEVLIYPRGFNITWGNDDRYWKKFNG----EKNCAAELKQVSWLE 64
           PH   +  A+++ K  +++ YPR   ITWGND+RYW+        +   A +L QVSWLE
Sbjct: 7   PHSDADPRAIEITKGGKMIFYPRALTITWGNDNRYWRFLPSTNLKDPKSAVQLLQVSWLE 66

Query: 65  VACSIDKKLKYGKTYKVGFEVSLKPDAFGWKDVDVYVMAKVGKSGKYSYRKVHLDR--AP 124
           V CS D K++ G+TYKVGF VSL+PDAFGW DV+V++MAKVGK G Y ++K    +    
Sbjct: 67  VTCSTD-KVEAGQTYKVGFNVSLQPDAFGWDDVEVFIMAKVGKKGTYFFKKTSFGKRLGT 126

Query: 125 LGEKIRIPDYFNETLKIKAMRPPSNKHD 146
             +K  +PD   E L+IK + P S+  D
Sbjct: 127 SSKKFSVPD---EGLEIKIVAPQSSPGD 150

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BLAST of CmaCh18G005510 vs. TrEMBL
Match: A0A0A0LYD1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G703580 PE=4 SV=1)

HSP 1 Score: 125.6 bits (314), Expect = 9.7e-26
Identity = 70/145 (48.28%), Postives = 94/145 (64.83%), Query Frame = 1


Query: 5   PHKVPEEDALD-VKNNEVLIYPRGFNITWGNDDRYWK-----KFNGEKNCAAELKQVSWL 64
           PH      A++  KN +V+IYP+GF ITWGND RYW+     +   E + AAEL QVSWL
Sbjct: 9   PHFNGNPKAIEKAKNQKVIIYPKGFTITWGNDKRYWRFPRQSRNLKESSAAAELLQVSWL 68

Query: 65  EVACSIDKKLKYGKTYKVGFEVSLKPDAFGWKDVDVYVMAKVGKSGKYSYRKVHLD-RAP 124
           EV C  D  ++ GK+YKVGF VS+   AFGWK  +VY+MAK+GK+GK+ Y+K+ LD +A 
Sbjct: 69  EVTCWTD-NVEIGKSYKVGFNVSMTAAAFGWKGCEVYIMAKIGKAGKFVYKKMCLDGKAS 128

Query: 125 LGE-KIRIPDYFNETLKIKAMRPPS 142
            G+ K  +P    E   I  ++PPS
Sbjct: 129 DGQTKFNMP----EDNLIITVKPPS 148

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BLAST of CmaCh18G005510 vs. TrEMBL
Match: A0A0A0LYR0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G708660 PE=4 SV=1)

HSP 1 Score: 123.6 bits (309), Expect = 3.7e-25
Identity = 64/118 (54.24%), Postives = 80/118 (67.80%), Query Frame = 1


Query: 5   PHKVPEEDALDVKNNEVL-----IYPRGFNITWGNDDRYWK--KFNGEKNC-AAELKQVS 64
           PH+  E D ++ K    +     +YP GFNITWGNDDRYW   K N   +   AELKQVS
Sbjct: 6   PHR--EADEINGKEKNFIKGITKVYPTGFNITWGNDDRYWNITKPNVPGSLYVAELKQVS 65

Query: 65  WLEVACSIDKKLKYGKTYKVGFEVSLKPDAFGWKDVDVYVMAKVGKSGKYSYRKVHLD 115
           WLEV CS D  ++ GK Y+VGF +++KPDAFGW  +DVYVMAKVGK GK++  KV L+
Sbjct: 66  WLEVTCSTDN-VEVGKYYRVGFNITMKPDAFGWNGIDVYVMAKVGKKGKFTSMKVSLE 120

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BLAST of CmaCh18G005510 vs. TrEMBL
Match: D0R6I7_MALDO (Phloem protein 2 OS=Malus domestica GN=pp2-3 PE=2 SV=1)

HSP 1 Score: 115.5 bits (288), Expect = 1.0e-22
Identity = 65/151 (43.05%), Postives = 88/151 (58.28%), Query Frame = 1


Query: 1   MEKGPH-KVPEEDALDVKNNEVLIYPRGFNITWGNDDRYWK----KFNGEKNCAAELKQV 60
           M   PH +  ++D +  + N+ +  PRG NI WGND+RYWK    +   E    AEL QV
Sbjct: 3   MTTKPHFQAEQDDEVKQEGNKYIFRPRGLNIVWGNDERYWKLPKKQSKDEPTEPAELIQV 62

Query: 61  SWLEVACSIDKKLKYGKTYKVGFEVSLKPDAFGWKDVDVYVMAKVGKSGKYSYRKVHL-D 120
           SWLEV  S    L   K Y++ F+V L PDAFGW+D+  ++MAKVGK GKY++ KV +  
Sbjct: 63  SWLEVTGSYS--LSTAKKYEISFDVELAPDAFGWRDIQAFLMAKVGKKGKYTWTKVKVAA 122

Query: 121 RAPLGEKIRIPDYFNETLKIKAMRPPSNKHD 146
           + P   K +IPD     +KI+    PSN  D
Sbjct: 123 QDPKVGKFKIPDDNGPPMKIEV---PSNAPD 148

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BLAST of CmaCh18G005510 vs. TrEMBL
Match: A0A067GPZ7_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g030911mg PE=4 SV=1)

HSP 1 Score: 113.2 bits (282), Expect = 5.0e-22
Identity = 59/130 (45.38%), Postives = 78/130 (60.00%), Query Frame = 1


Query: 3   KGPHKVPEEDALD--VKNNEVLIYPRGFNITWGNDDRYWKKFNGEKNCAAELKQVSWLEV 62
           K PH   E++A++   +  E  I PRG NI WGND RYW       N   EL QV WLE 
Sbjct: 4   KKPHHEAEQEAMEWNAERTEATIKPRGLNIVWGNDPRYWHLPEKRSNDPVELVQVCWLEA 63

Query: 63  ACSIDKKLKYGKTYKVGFEVSLKPDAFGWKDVDVYVMAKVGKSGKYSYRKV----HLDRA 122
             S++  +K GK Y++GF++SLK DAFGW    V++MAK+GK GKY++RK+    HL + 
Sbjct: 64  TGSVE--VKRGKKYQIGFKISLKADAFGWSGCPVFMMAKLGKKGKYTWRKMKPLDHLGK- 123

Query: 123 PLGEKIRIPD 127
              E   IPD
Sbjct: 124 ---EAAEIPD 127

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BLAST of CmaCh18G005510 vs. TAIR10
Match: AT1G31200.1 (AT1G31200.1 phloem protein 2-A9)

HSP 1 Score: 96.7 bits (239), Expect = 2.4e-20
Identity = 51/127 (40.16%), Postives = 67/127 (52.76%), Query Frame = 1


Query: 6   HKVPEEDALDVKNNEVLIYPRGFNITWGNDDRYWKKFNGEKNCAAELKQVSWLEVACSID 65
           HK   +   D      +  P G N  WG D RYW     E    AELK VSWLEV  S D
Sbjct: 9   HKADSKMEQDNNRKAWISQPSGLNFVWGGDSRYWV-IPKEPRMPAELKMVSWLEVTGSFD 68

Query: 66  KKLKYGKTYKVGFEVSLKPDAFGWKDVDVYVMAKVGKSGKYSYRKVHLDRAPLG------ 125
            K++ GKTY++GF++S KPDA GW    V++ AK+GK GK  ++++       G      
Sbjct: 69  -KIEPGKTYRIGFKISFKPDATGWDKAPVFMSAKIGKKGKTVWKRIKSVSQNFGILKGGS 128

Query: 126 EKIRIPD 127
           E + IPD
Sbjct: 129 EPVNIPD 133

[Close]

BLAST of CmaCh18G005510 vs. TAIR10
Match: AT1G10155.1 (AT1G10155.1 phloem protein 2-A10)

HSP 1 Score: 88.2 bits (217), Expect = 8.7e-18
Identity = 42/97 (43.30%), Postives = 59/97 (60.82%), Query Frame = 1


Query: 15  DVKNNEVLIYPRGFNITWGNDDRYWKKFNGEKNCAAELKQVSWLEVACSIDKKLKYGKTY 74
           D+     +  P G N  WG D RYW   N E    AELK+VSWLEV  S D K++ GKTY
Sbjct: 21  DIVRKAWVFKPSGLNFIWGGDSRYWVIPN-EDRTPAELKKVSWLEVTGSYD-KIEPGKTY 80

Query: 75  KVGFEVSLKPDAFGWKDVDVYVMAKVGKSGKYSYRKV 112
           ++GF++S   DA GW    V++ AK+GK G+  ++++
Sbjct: 81  RIGFKISFTADATGWDQAPVFMSAKIGKKGRTIWKRI 115

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BLAST of CmaCh18G005510 vs. NCBI nr
Match: gi|778664566|ref|XP_011660312.1| (PREDICTED: protein PHLOEM PROTEIN 2-LIKE A9-like [Cucumis sativus])

HSP 1 Score: 129.0 bits (323), Expect = 1.3e-26
Identity = 67/148 (45.27%), Postives = 93/148 (62.84%), Query Frame = 1


Query: 5   PHKVPEEDALDV-KNNEVLIYPRGFNITWGNDDRYWKKFNG----EKNCAAELKQVSWLE 64
           PH   +  A+++ K  +++ YPR   ITWGND+RYW+        +   A +L QVSWLE
Sbjct: 7   PHSDADPRAIEITKGGKMIFYPRALTITWGNDNRYWRFLPSTNLKDPKSAVQLLQVSWLE 66

Query: 65  VACSIDKKLKYGKTYKVGFEVSLKPDAFGWKDVDVYVMAKVGKSGKYSYRKVHLDR--AP 124
           V CS D K++ G+TYKVGF VSL+PDAFGW DV+V++MAKVGK G Y ++K    +    
Sbjct: 67  VTCSTD-KVEAGQTYKVGFNVSLQPDAFGWDDVEVFIMAKVGKKGTYFFKKTSFGKRLGT 126

Query: 125 LGEKIRIPDYFNETLKIKAMRPPSNKHD 146
             +K  +PD   E L+IK + P S+  D
Sbjct: 127 SSKKFSVPD---EGLEIKIVAPQSSPGD 150

[Close]

BLAST of CmaCh18G005510 vs. NCBI nr
Match: gi|659118310|ref|XP_008459054.1| (PREDICTED: protein PHLOEM PROTEIN 2-LIKE A9-like [Cucumis melo])

HSP 1 Score: 128.3 bits (321), Expect = 2.2e-26
Identity = 67/127 (52.76%), Postives = 84/127 (66.14%), Query Frame = 1


Query: 5   PHKVPEEDALD--VKNNEVLIYPRGFNITWGNDDRYWKKFNGEKNCA---AELKQVSWLE 64
           PH+  +E A +  V      +YPRGFNITWGNDDRYW   N     +   AELKQVSWLE
Sbjct: 6   PHREADETAKEKNVIKGITKVYPRGFNITWGNDDRYWNITNPNVPGSLYMAELKQVSWLE 65

Query: 65  VACSIDKKLKYGKTYKVGFEVSLKPDAFGWKDVDVYVMAKVGKSGKYSYRKVHL-DRAPL 124
           V CS D  ++ G+TY+VGF ++++PDAFGW  +DVYVMAKVGK GK++  KV L +  P 
Sbjct: 66  VTCSTD-NVEVGETYRVGFNITMRPDAFGWDGIDVYVMAKVGKKGKFTSMKVSLGEIGPN 125

Query: 125 GEKIRIP 126
              I IP
Sbjct: 126 ETPITIP 131

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BLAST of CmaCh18G005510 vs. NCBI nr
Match: gi|659118304|ref|XP_008459052.1| (PREDICTED: protein PHLOEM PROTEIN 2-LIKE A9-like [Cucumis melo])

HSP 1 Score: 127.9 bits (320), Expect = 2.8e-26
Identity = 69/146 (47.26%), Postives = 93/146 (63.70%), Query Frame = 1


Query: 5   PHKVPEEDALD-VKNNEVLIYPRGFNITWGNDDRYWK-----KFNGEKNCAAELKQVSWL 64
           PH   +  A++  KN + +IYP+GFNITWGND RYW+     +   E + AAEL QVSWL
Sbjct: 9   PHFNGDPKAIEKAKNKKTIIYPKGFNITWGNDKRYWRLPRQSRNLKESSAAAELLQVSWL 68

Query: 65  EVACSIDKKLKYGKTYKVGFEVSLKPDAFGWKDVDVYVMAKVGKSGKYSYRKVHLDRAPL 124
           EV C  D  ++ GK+YKVGF VS+   AFGWK  DVY+MAK+GK+GK+ Y+K+ LD    
Sbjct: 69  EVTCWTD-NVEIGKSYKVGFNVSMTAAAFGWKGCDVYIMAKIGKAGKFVYKKMCLDSKAS 128

Query: 125 GE--KIRIPDYFNETLKIKAMRPPSN 143
            +  K  +P    E   I  ++PPS+
Sbjct: 129 DDQNKFNMP----EDDLIITVKPPSS 149

[Close]

BLAST of CmaCh18G005510 vs. NCBI nr
Match: gi|778664568|ref|XP_011660313.1| (PREDICTED: protein PHLOEM PROTEIN 2-LIKE A9-like [Cucumis sativus])

HSP 1 Score: 125.6 bits (314), Expect = 1.4e-25
Identity = 70/145 (48.28%), Postives = 94/145 (64.83%), Query Frame = 1


Query: 5   PHKVPEEDALD-VKNNEVLIYPRGFNITWGNDDRYWK-----KFNGEKNCAAELKQVSWL 64
           PH      A++  KN +V+IYP+GF ITWGND RYW+     +   E + AAEL QVSWL
Sbjct: 9   PHFNGNPKAIEKAKNQKVIIYPKGFTITWGNDKRYWRFPRQSRNLKESSAAAELLQVSWL 68

Query: 65  EVACSIDKKLKYGKTYKVGFEVSLKPDAFGWKDVDVYVMAKVGKSGKYSYRKVHLD-RAP 124
           EV C  D  ++ GK+YKVGF VS+   AFGWK  +VY+MAK+GK+GK+ Y+K+ LD +A 
Sbjct: 69  EVTCWTD-NVEIGKSYKVGFNVSMTAAAFGWKGCEVYIMAKIGKAGKFVYKKMCLDGKAS 128

Query: 125 LGE-KIRIPDYFNETLKIKAMRPPS 142
            G+ K  +P    E   I  ++PPS
Sbjct: 129 DGQTKFNMP----EDNLIITVKPPS 148

[Close]

BLAST of CmaCh18G005510 vs. NCBI nr
Match: gi|449455437|ref|XP_004145459.1| (PREDICTED: protein PHLOEM PROTEIN 2-LIKE A9 [Cucumis sativus])

HSP 1 Score: 123.6 bits (309), Expect = 5.3e-25
Identity = 64/118 (54.24%), Postives = 80/118 (67.80%), Query Frame = 1


Query: 5   PHKVPEEDALDVKNNEVL-----IYPRGFNITWGNDDRYWK--KFNGEKNC-AAELKQVS 64
           PH+  E D ++ K    +     +YP GFNITWGNDDRYW   K N   +   AELKQVS
Sbjct: 6   PHR--EADEINGKEKNFIKGITKVYPTGFNITWGNDDRYWNITKPNVPGSLYVAELKQVS 65

Query: 65  WLEVACSIDKKLKYGKTYKVGFEVSLKPDAFGWKDVDVYVMAKVGKSGKYSYRKVHLD 115
           WLEV CS D  ++ GK Y+VGF +++KPDAFGW  +DVYVMAKVGK GK++  KV L+
Sbjct: 66  WLEVTCSTDN-VEVGKYYRVGFNITMKPDAFGWNGIDVYVMAKVGKKGKFTSMKVSLE 120

The following BLAST results are available for this feature:

BLAST of CmaCh18G005510 vs. Swiss-Prot


Match Name	E-value	Identity	Description
P2A09_ARATH	4.3e-19	40.16	Protein PHLOEM PROTEIN 2-LIKE A9 OS=Arabidopsis thaliana GN=PP2A9 PE=2 SV=1	[more]

BLAST of CmaCh18G005510 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0M0V4_CUCSA	8.8e-27	45.27	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G703570 PE=4 SV=1	[more]
A0A0A0LYD1_CUCSA	9.7e-26	48.28	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G703580 PE=4 SV=1	[more]
A0A0A0LYR0_CUCSA	3.7e-25	54.24	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G708660 PE=4 SV=1	[more]
D0R6I7_MALDO	1.0e-22	43.05	Phloem protein 2 OS=Malus domestica GN=pp2-3 PE=2 SV=1	[more]
A0A067GPZ7_CITSI	5.0e-22	45.38	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g030911mg PE=4 SV=1	[more]

BLAST of CmaCh18G005510 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G31200.1	2.4e-20	40.16	phloem protein 2-A9	[more]
AT1G10155.1	8.7e-18	43.30	phloem protein 2-A10	[more]

BLAST of CmaCh18G005510 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778664566\|ref\|XP_011660312.1\|	1.3e-26	45.27	PREDICTED: protein PHLOEM PROTEIN 2-LIKE A9-like [Cucumis sativus]	[more]
gi\|659118310\|ref\|XP_008459054.1\|	2.2e-26	52.76	PREDICTED: protein PHLOEM PROTEIN 2-LIKE A9-like [Cucumis melo]	[more]
gi\|659118304\|ref\|XP_008459052.1\|	2.8e-26	47.26	PREDICTED: protein PHLOEM PROTEIN 2-LIKE A9-like [Cucumis melo]	[more]
gi\|778664568\|ref\|XP_011660313.1\|	1.4e-25	48.28	PREDICTED: protein PHLOEM PROTEIN 2-LIKE A9-like [Cucumis sativus]	[more]
gi\|449455437\|ref\|XP_004145459.1\|	5.3e-25	54.24	PREDICTED: protein PHLOEM PROTEIN 2-LIKE A9 [Cucumis sativus]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR025886	PP2-like

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh18G005510.1	CmaCh18G005510.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR025886	Phloem protein 2-like	PFAM	PF14299	PP2	coord: 21..255 score: 1.3
None	No IPR available	PANTHER	PTHR32278	FAMILY NOT NAMED	coord: 15..136 score: 9.2E-41coord: 189..266 score: 9.2
None	No IPR available	PANTHER	PTHR32278:SF8	PHLOEM PROTEIN 2-A10-RELATED	coord: 15..136 score: 9.2E-41coord: 189..266 score: 9.2

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh18G005510	Cucurbita pepo (Zucchini)	cmacpeB415
CmaCh18G005510	Cucurbita pepo (Zucchini)	cmacpeB438
CmaCh18G005510	Bottle gourd (USVL1VR-Ls)	cmalsiB369
CmaCh18G005510	Cucumber (Gy14) v2	cgybcmaB096
CmaCh18G005510	Melon (DHL92) v3.6.1	cmamedB423
CmaCh18G005510	Silver-seed gourd	carcmaB1314
CmaCh18G005510	Cucumber (Chinese Long) v3	cmacucB0477
CmaCh18G005510	Watermelon (97103) v2	cmawmbB394
CmaCh18G005510	Wax gourd	cmawgoB0532
CmaCh18G005510	Cucurbita maxima (Rimu)	cmacmaB216
CmaCh18G005510	Cucurbita moschata (Rifu)	cmacmoB398
CmaCh18G005510	Cucurbita moschata (Rifu)	cmacmoB407
CmaCh18G005510	Wild cucumber (PI 183967)	cmacpiB404
CmaCh18G005510	Cucumber (Chinese Long) v2	cmacuB400
CmaCh18G005510	Melon (DHL92) v3.5.1	cmameB364
CmaCh18G005510	Watermelon (Charleston Gray)	cmawcgB342
CmaCh18G005510	Watermelon (97103) v1	cmawmB380
CmaCh18G005510	Watermelon (97103) v1	cmawmB385