CmaCh18G005420 (gene) Cucurbita maxima (Rimu)

Overview
NameCmaCh18G005420
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu))
DescriptionTransmembrane 56
LocationCma_Chr18 : 3485381 .. 3490864 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AAAAATCATCGGGCAAGGCGCGAAGATATCACATTCCTTGGGTTGGTAGTGCGAGGATTGGATAGAATGAAATTGAATCCATTAGAATACGACGATCCCATCTCTGGACACTCAAATGCATTGCTGATTAGCAAAACCCACTTCCAATTCGATTACCCATATTTCACCAATTCCTTCTTATTCTTTGTAATTTCTCTCCATCTTGTCGCGATTGACTATTTTAGATTGTTGCGGTTGGAGATTCCTAACGCTTCACATTGATTCAACCTCACGGTTCTTTTATACCGGCCGGTTGTTGCATCGCCCTTTACAGATATCTTATTTTGTTTGTTCCCATTTTGTTATCTTTGAAAAAATGAAAAACCCCTTCCTCTGCATCTCCTCGTGATCTGGGGTTTTCATTTATGAGGTATTGCTTCTTTCTTTTCTTTGTTTTTTGCGCTGATTTTACTGATTTCCTCTGTTTTTCTGGGTTGCTCATCTGTGTTTTGATCGTTTATGTTGATGGGATCTTTTAGAGTTGTGAATTTGTGTGTTTGCTGTAAGTTACACCATATGATCTTTGAGCTTATCTGATTATTTGCTTTTGTAGCGTTCGTGGGTTTTGTTCAAAATATGGAATCATCCTCTTGTAGTTTGTTGATTCAATGAGTGAGCGTCGTTTCTCTTTGAGACAGTCCTTGTTTCTTCTAGTTCTTCTTTAACATTTTGTATTTTCATTTGTAGTTTGTAGGCAATCTGCCTTGCTTGAATGACATTAATAAGTTTTTTGAAAAAAATATTGATATGTTTGGAAGAAACGAAGTTGTTTTGTTTGATGCTTCCATGAATGCTTTCTTGCGGGTGGTTGCATGGTATGTTAGGAATCACGGCTCTTCTCAATGGTATGATATTGTCCACTTTGAGCCATAAGCTCTCATGGTTTTTCTTTGGGTCTCCCCAAAGGCTGAATACCAATGGAGATACAATTCTTATTTACAAACTCATGATCATTCCTCCTAACAATCCTCACCAATCCTCCCCTCGAACAAAGTACATTATAGAGCCTCCCTCGAGGCCTATGGAGCTCTCGAACAGCCTCCCCTTAATCAAGGCTCGACTTGTTCTCTGGAGTCCTTGAAAGAAGTACCTCCTTTGTTCGACACTTGAGTCACTTTTGACTACACCTTCGAGGTTCACAACTTCATTATTTGACATTTGAGAATGCTATTGACATGGCTAAGTTCAGGGCATGGCTCTGATACCATATTAGGAATCACGACTTTCCACAATGGTATGATACTGTCCACTTTGAGCATAAGCTCTCATGACTTTACTTTTGGTTTCCCCAAAACGCCTCATATCAATGGAGAATGTTTCTTTACTTATAAACCCATGATCATTCCTTAAATTAGCCAACGTGAGACTCCCTCCCAACAATTCTCAACATGATACAGCAATAGTGTCTCAAGAGCTCTTTTGTGGTATATTCAAAATGAAAGAAAGAATCAATAGTAGAATAGTACTCTGCCATGATACAGACCTGGGAATCGTATTCCCGGCTGGTGCACCTTGCAATGGTGATATTTGTGCCTAGAAAGTTGATCACATGGGTCATCCATCAACATTATCCAATAAAAAGAATGAAAGAATCGATAGAATTTGCAATGATGTTTTTTACATTGCACAGTTTAAGTCTCATATATTTTATATGATAATTCTAGACTGGATGCATTTAGTTTGGTCCCAAAAGGAAAATATAAACTATGGAACAACTTTAGCTAAGTGATTCGTGTGCTCTTTCGTGGGAAGTTCAGATTGATTGCTTAGAAATTTTTTAAGATGGAATAAGGAATCAACTAGATTTTGGATGTTATGCTGTTGTACTCTTCTCGATGCCGTTTGTCCTTCATTTTGTGAGGTTAATTGCCGCTTATGAACATTGATTGCTTAAGCACAGATTTTGTATATCACTATCCTTTATATTTCTTTCTAACTAGCTTCATATTTGGTCAAGAAGGGATAACAACATGGAGTGAGGGAGTAAATAGTTAATTCAGTCTAAGATACAGCAATCTGCCGATTGTTATGTAGCCAAACAAAACAATGGCAATGTCTTTGAAGACTGTAATGGCTATTAAATCTTACCAAAGTCAAGCTGATGCATTGGTAAAGAACTACTTATTAGCAGATCGTTTTATCCCGTACACCTCTGTTCTTGGAGGCATGCTTGCTTGTAAATTGGTATGTATCAACTTTTAGCTCATGCTAGATATTAGGACAAAATGCTGCTTCTCTTCAATTAGGACACATTAAAAATTTTGTGTTTCCTCGTGCAGGTATATGATCTTACTCAATTAGTTAGCAATTTTTACTTCAAGAGTTATCTGGGTCTTACGAAAATTCAACGAGTCGAGTGGAATAACCGGTGAGTTTAGTATCTTTGATTGTCCATTGCTTTCATAATCTATTCAGTGGACTGTTATGGCCATTACTGATATTTTGAACTAAAATTGGCAGCGGTGTGTCCACTATTCATGCAATATATATCTCAATTATGTCATTGTACTTCGTTTTCTGGTCAGATCTCTTCTCTGACCAGCGTCACGCTGGCCTTCTTACCTTTCAAAGTTCGACGTTGTCTACGTTCATATTGGGGGTAAGCTTTCTACTACCTAATCTTCAATGAATGTCAGCTTCCTTTTGAATTTTTTGATGTTTTAGATAAAGTTTCTAAGCAGCATGTAAGCGGTGCACGATAAGGACACATGCCAAAATGTTGTCGGCCCAACGTTTTCTTGTGGATTGTGTAAAGGCCATATGTTAAAAAAAACTAAGTCCCAATGTTAACCACCCTATGTGTTAGCCATTAGTAGTTGCTTTCATCTATTGAGGTGTGTATTAAGTTATCCAAAATGTTCTTTAAAGCTAAGAACTCATCAATGGATGAAATGGGGGTGGGTTGCAACAATGTTAGAAAGATAGAGGCAGCCTGAAAGGAGGCGCCATTAGCAAAACTCGGTCCTTGCGATCCAGCTCAACCATGCTATTCAATATAGCATTAGCAAGGCAATGCAAACACGTCACAAAACAATGATTTGCGACGTGTTGGGAAATGAAACGAGGATGATATTGGATCTTTGCTTCAACATTGTTTGTTTTAATCTAAAAGTTGAACCTTATCTGTATTATACTTAGTTGAATGAGGGAACCTCTATAATCCAACATGACATGGCCATATTTGGACGGACACAATGTCTGATTTTCTGTTTCTGATTTGAGGATAACATCTACGATAGACCTTCCGAGCTGTCTGACACCGCTTGGCAGACTTTTCGAGTCATTTGAGCTTCTATTCTGTTTTACTTGAATTTTTACTAAACATTAACTAAAATTCTAATCATATACCCTTTTCCAGATTTCGGTTGGATACTTTTTGGCAGATCTCGGATTGATCATTTTTCTGTATCCGTCTTTAGGCGGGATGGAATATGTAAGTACCTTCGCTGCTGATAGCGCTTCAAATTTGATAAGAGTCGTGCATAATTATGAAACTTCGATGATAGGTTGTCCACCACTCTCTTTCTGGACTAGCAGTAGCATATTCTGTTCTTTCTGGAGAAGGGCAACTCTATACATATATGGTTCTCATTTCAGAGATTACAACTCCTGAGATTAATATGAGATGGTAGGCTTTCGTTATGGTATTGATTCTTAATTTTATTAGTTCTTCCTCTGAATTCTTTCATATTTTGTGAAGGTATCTTGACACAGCTGGTATGAAGAGATCCTGTGCATATCTGATTAATGGCTTTGTAATATTCTTTGCATGGCTGGTGAGTTAATGGTCTGAAGGTCATCTTGCCTGTTTTTTTTTTTTATATATAAAATGGCGTAAACACGACCGTCAATAGCTCGACGACATGCTAAAAGATCCTAAAGAATTGGATTTAACATAACTGAACATGAACTACCACAGCAGATATTGTCTTCTTTGGGTTTTCCTTTTCGGGCTTTCCCTCAAGGTTTTTAAAACGTGTCTACTGGGAAGAGGTTTTCACACTCTTATAAATGGTGCTTTGTTCTTCTCCCCAATCGATGTGGGATCTCACAATCCACCCCCTTTGGGGCCCTACGTCCTCGCTGGCACTCGTTCCCTTCTCCAATCGATGTGGGACCCCTAATCCCCACCCCCCTTCAGGGTCCAGCATTCTTGCTGGCACACCGCTTCGTGTCCACCCTCCTTCGAAGCTCATCCTCCTCATTGGCACATTGCCCAGTGTCTGGCTCTGATACCATTCGTAACAGCCCAAGTCCACCGCTAGCAGATATTGTCTTCTTTAGGCTTTCCCTTTTGGGCTTCCCTTTAAGGTTTTTAAAACGCGTTTACTAGGGAGAGGTTTTCACTCTCTTATAAAGGGTGCTTTGTTCTTCTCCCCAACCAAGGTGGGATCTCACAATCCACCCCCTTGGGAACCAACGTCCTCGTTGGCACTCGTACCCTTCTCCAATCGATGTGAGACCCCCCCCAATCCACCTCATTTCGGGATCCAGCGTCCTTGCTGGCACACCGCCTCGTGTCCACCCTCCTTTGAAGCTCATCCTCCTTGGTGGCACATCGCCCCATGTCTGGTTTTGATACCATTTGTAACAGCCCAAGTCCGCCACCATCAAATATTGTCCTCTTTGGGCTTTCCCTTTCCAGCTTTCTCTCAAGGTTTTTAAAACGCGTCTACCAGGAAGAGGTTTTCATGCTCTTATAAAGGGTGTTTTGTTCTCCTCTCAAATCGATATGAGAGATATCGATCTCACATATTAGTATCCGCACTCAGATCTTGTTTTATGATTGGATTTTCTTGTATTTGGATTGTTGTTTACATGCTTGGTGATGAGTGTTTATAACAGGTTGCTCGCATTCTGCTGTTTGGTTACACATTCTATCATGTTTACCTGCACTATGATCAGGTATTTTCAAGATCAATTATGCATATTTTTCAGTGCTTATGGCTTTGTTCATTAAGTTGTAAAATGGGAACATTGATCTTATTGCAATATGTTCTCTCATTTAACTCGATCACGATATGGACAATCGTGTTATGCAGGTAATTAAGATGCATGTAATAGGATATATTTTGGTATTTGGAGTGCCGACCGTGCTAGGGATGATGAACTTGATGTGGTTCGGGAAGATCGTGAAGGGATTAATGAAGACGATATCGAAAAGGCGATGAGAAACATGTTCTTGTGGTTCATATCAATCTGCAAATGGGTTGAGGAGGAAAAGGGATTTGATGCTATGCAGTGTGTTGTAAATGGTTCAAAATAACTTTAAATTCGTTGAGACATTTTTAGTGTCTTCTTCCTCTTGTCAGTTCTGTGTACCAATTCATTCTTTCTGTATAGTTCTTCTCTCTTTTTCCTGAATGTATGGAAGGAATGTGATGATACCGCTGCAATTATTTTGTATTCAGATATATTTACGATCTCGGTTCGGTTTGGTTCGTT

mRNA sequence

AAAAATCATCGGGCAAGGCGCGAAGATATCACATTCCTTGGGTTGGTAGTGCGAGGATTGGATAGAATGAAATTGAATCCATTAGAATACGACGATCCCATCTCTGGACACTCAAATGCATTGCTGATTAGCAAAACCCACTTCCAATTCGATTACCCATATTTCACCAATTCCTTCTTATTCTTTGTAATTTCTCTCCATCTTGTCGCGATTGACTATTTTAGATTGTTGCGGTTGGAGATTCCTAACGCTTCACATTGATTCAACCTCACGGTTCTTTTATACCGGCCGGTTGTTGCATCGCCCTTTACAGATATCTTATTTTGTTTGTTCCCATTTTGTTATCTTTGAAAAAATGAAAAACCCCTTCCTCTGCATCTCCTCGTGATCTGGGGTTTTCATTTATGAGGGATAACAACATGGAGTGAGGGAGTAAATAGTTAATTCAGTCTAAGATACAGCAATCTGCCGATTGTTATGTAGCCAAACAAAACAATGGCAATGTCTTTGAAGACTGTAATGGCTATTAAATCTTACCAAAGTCAAGCTGATGCATTGGTAAAGAACTACTTATTAGCAGATCGTTTTATCCCGTACACCTCTGTTCTTGGAGGCATGCTTGCTTGTAAATTGGTATATGATCTTACTCAATTAGTTAGCAATTTTTACTTCAAGAGTTATCTGGGTCTTACGAAAATTCAACGAGTCGAGTGGAATAACCGCGGTGTGTCCACTATTCATGCAATATATATCTCAATTATGTCATTGTACTTCGTTTTCTGGTCAGATCTCTTCTCTGACCAGCGTCACGCTGGCCTTCTTACCTTTCAAAGTTCGACGTTGTCTACGTTCATATTGGGGATTTCGGTTGGATACTTTTTGGCAGATCTCGGATTGATCATTTTTCTGTATCCGTCTTTAGGCGGGATGGAATATGTTGTCCACCACTCTCTTTCTGGACTAGCAGTAGCATATTCTGTTCTTTCTGGAGAAGGGCAACTCTATACATATATGGTTCTCATTTCAGAGATTACAACTCCTGAGATTAATATGAGATGGTATCTTGACACAGCTGGTATGAAGAGATCCTGTGCATATCTGATTAATGGCTTTGTAATATTCTTTGCATGGCTGGTTGCTCGCATTCTGCTGTTTGGTTACACATTCTATCATGTTTACCTGCACTATGATCAGGTAATTAAGATGCATGTAATAGGATATATTTTGGTATTTGGAGTGCCGACCGTGCTAGGGATGATGAACTTGATGTGGTTCGGGAAGATCGTGAAGGGATTAATGAAGACGATATCGAAAAGGCGATGAGAAACATGTTCTTGTGGTTCATATCAATCTGCAAATGGGTTGAGGAGGAAAAGGGATTTGATGCTATGCAGTGTGTTGTAAATGGTTCAAAATAACTTTAAATTCGTTGAGACATTTTTAGTGTCTTCTTCCTCTTGTCAGTTCTGTGTACCAATTCATTCTTTCTGTATAGTTCTTCTCTCTTTTTCCTGAATGTATGGAAGGAATGTGATGATACCGCTGCAATTATTTTGTATTCAGATATATTTACGATCTCGGTTCGGTTTGGTTCGTT

Coding sequence (CDS)

ATGGCAATGTCTTTGAAGACTGTAATGGCTATTAAATCTTACCAAAGTCAAGCTGATGCATTGGTAAAGAACTACTTATTAGCAGATCGTTTTATCCCGTACACCTCTGTTCTTGGAGGCATGCTTGCTTGTAAATTGGTATATGATCTTACTCAATTAGTTAGCAATTTTTACTTCAAGAGTTATCTGGGTCTTACGAAAATTCAACGAGTCGAGTGGAATAACCGCGGTGTGTCCACTATTCATGCAATATATATCTCAATTATGTCATTGTACTTCGTTTTCTGGTCAGATCTCTTCTCTGACCAGCGTCACGCTGGCCTTCTTACCTTTCAAAGTTCGACGTTGTCTACGTTCATATTGGGGATTTCGGTTGGATACTTTTTGGCAGATCTCGGATTGATCATTTTTCTGTATCCGTCTTTAGGCGGGATGGAATATGTTGTCCACCACTCTCTTTCTGGACTAGCAGTAGCATATTCTGTTCTTTCTGGAGAAGGGCAACTCTATACATATATGGTTCTCATTTCAGAGATTACAACTCCTGAGATTAATATGAGATGGTATCTTGACACAGCTGGTATGAAGAGATCCTGTGCATATCTGATTAATGGCTTTGTAATATTCTTTGCATGGCTGGTTGCTCGCATTCTGCTGTTTGGTTACACATTCTATCATGTTTACCTGCACTATGATCAGGTAATTAAGATGCATGTAATAGGATATATTTTGGTATTTGGAGTGCCGACCGTGCTAGGGATGATGAACTTGATGTGGTTCGGGAAGATCGTGAAGGGATTAATGAAGACGATATCGAAAAGGCGATGA

Protein sequence

MAMSLKTVMAIKSYQSQADALVKNYLLADRFIPYTSVLGGMLACKLVYDLTQLVSNFYFKSYLGLTKIQRVEWNNRGVSTIHAIYISIMSLYFVFWSDLFSDQRHAGLLTFQSSTLSTFILGISVGYFLADLGLIIFLYPSLGGMEYVVHHSLSGLAVAYSVLSGEGQLYTYMVLISEITTPEINMRWYLDTAGMKRSCAYLINGFVIFFAWLVARILLFGYTFYHVYLHYDQVIKMHVIGYILVFGVPTVLGMMNLMWFGKIVKGLMKTISKRR
Homology
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BLAST of CmaCh18G005420 vs. Swiss-Prot
Match: TMM56_MOUSE (Transmembrane protein 56 OS=Mus musculus GN=Tmem56 PE=2 SV=1)

HSP 1 Score: 83.2 bits (204), Expect = 4.9e-15
Identity = 61/215 (28.37%), Postives = 112/215 (52.09%), Query Frame = 1 

Query: 62  YLGLTKIQRVEWNNRGVSTIHAIYISIMSLYFVFWSDLFSDQRHAGLLTFQSSTLSTFIL 121
           Y  L+  +++EWN+R VST H++ + I  LY  F+ +        G  T+ +  ++T   
Sbjct: 51  YNSLSIDKKIEWNSRVVSTCHSLLVGIFGLYLFFFDEATITDPLWGDPTYVNINIAT--- 110

Query: 122 GISVGYFLADLGLIIFLYPSLGGMEYVVHHSLSGLAVAYSVLSGEGQLY-TYMVLISEIT 181
             + GY ++DL +I+F +  +G   +++HH  +GL   Y VL+     Y     L++E++
Sbjct: 111 --ASGYLISDLLIILFNWKVIGDKFFIIHH-CAGLTAYYFVLTTGALAYIANFRLLAELS 170

Query: 182 TPEINMRWYLDTAGM-KRSCAYLINGFVIFFAWLVARILLFGYTFYHVYLHY--DQVIKM 241
           +P +N RW+ +     K S A +ING ++   + + RI+     ++ +Y  Y  +  I+ 
Sbjct: 171 SPFVNQRWFFEALKYPKFSKANVINGILMTVVFFIVRIISIPPMYFFLYSVYGTEPYIRF 230

Query: 242 HVIGYILVFGVPTVLGMMNLMWFGKIVKGLMKTIS 273
             +   +      +L +MN+MW  KI KG +K IS
Sbjct: 231 GFVIQSVWIVTCVILDVMNIMWMIKITKGCIKVIS 259

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BLAST of CmaCh18G005420 vs. Swiss-Prot
Match: TMM56_HUMAN (Transmembrane protein 56 OS=Homo sapiens GN=TMEM56 PE=1 SV=1)

HSP 1 Score: 80.9 bits (198), Expect = 2.4e-14
Identity = 68/232 (29.31%), Postives = 115/232 (49.57%), Query Frame = 1 

Query: 57  FYFKSYLGLTKI----------QRVEWNNRGVSTIHAIYISIMSLYFVFWSDLFSDQRHA 116
           FYF SY    K+          +++EWN+R VST H++ + I  LY      LF +   A
Sbjct: 23  FYFVSYWFSAKVSPGFNSLSFKKKIEWNSRVVSTCHSLVVGIFGLYIF----LFDEATKA 82

Query: 117 GLLTFQSSTLSTFILGISVGYFLADLGLIIFLYPSLGGMEYVVHHSLSGLAVAYSVLSGE 176
             L +   +L+   + I+ GY ++DL +II  +  +G   +++HH  S  A    + +G 
Sbjct: 83  DPL-WGGPSLANVNIAIASGYLISDLSIIILYWKVIGDKFFIMHHCASLYAYYLVLKNGV 142

Query: 177 GQLYTYMVLISEITTPEINMRWYLDTAGM-KRSCAYLINGFVIFFAWLVARI--LLFGYT 236
                   L++E+++P +N RW+ +     K S A +ING ++   + + RI  +L  Y 
Sbjct: 143 LAYIGNFRLLAELSSPFVNQRWFFEALKYPKFSKAIVINGILMTVVFFIVRIASMLPHYG 202

Query: 237 FYHVYLHYDQVIKMHVIGYILVFGVPTVLGMMNLMWFGKIVKGLMKTISKRR 276
           F +     +  I++ V+  +       VL +MN+MW  KI KG +K IS  R
Sbjct: 203 FMYSVYGTEPYIRLGVLIQLSWVISCVVLDVMNVMWMIKISKGCIKVISHIR 249

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BLAST of CmaCh18G005420 vs. Swiss-Prot
Match: TM56B_XENLA (Transmembrane protein 56-B OS=Xenopus laevis GN=tmem56-b PE=2 SV=1)

HSP 1 Score: 79.7 bits (195), Expect = 5.4e-14
Identity = 63/215 (29.30%), Postives = 109/215 (50.70%), Query Frame = 1 

Query: 65  LTKIQRVEWNNRGVSTIHAIYISIMSLYFVFWSDLFSDQRHAGLLTFQSSTLSTFILGIS 124
           L+  Q++EWN+R VS+ HA+ +    LY + + D  +     G        +    + ++
Sbjct: 41  LSARQKIEWNSRTVSSFHALVVGCFCLYILVYDDAVNADPVWG-----DPFMVKLNVAVT 100

Query: 125 VGYFLADLGLIIFLYPSLGGMEYVVHHSLSGLAVAYSVLSGEGQL--YTYMVLISEITTP 184
            GY ++DL LII+ +  +G   +V HH L+ L   Y VL GEG L  +    LI+E +TP
Sbjct: 101 SGYLISDLLLIIYYWKEIGDKYFVTHH-LAALYACYYVL-GEGMLPYFGNFRLIAEFSTP 160

Query: 185 EINMRWYLDTAG-MKRSCAYLINGFVIFFAWLVARILLFGYTFYHVYLHY-DQVIKMHVI 244
            +N RW+ +  G  K S   ++NG ++  ++ + RI +    +  V+  +  +      +
Sbjct: 161 FVNQRWFFEVLGYSKYSLPNMVNGVLMTISFFIVRIAVIPIYYGRVFSTFGTEAFHRLGL 220

Query: 245 GYILVFGVPTV-LGMMNLMWFGKIVKGLMKTISKR 275
           G    + + +V L +MN+MW  KI KG  K +  R
Sbjct: 221 GAQCAWIISSVSLDIMNVMWMIKIAKGCYKVLYHR 248

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BLAST of CmaCh18G005420 vs. Swiss-Prot
Match: TM56B_DICDI (Transmembrane protein 56 homolog B OS=Dictyostelium discoideum GN=tmem56b PE=3 SV=1)

HSP 1 Score: 72.4 bits (176), Expect = 8.7e-12
Identity = 58/225 (25.78%), Postives = 117/225 (52.00%), Query Frame = 1 

Query: 50  LTQLVSNFYFKSYLGLTKIQRVEWNNRGVSTIHAIYISIMSLYFVFWSDLFSDQRHAGLL 109
           L +++   + K+ +G  + +R+EW NR +ST++AI  S +S+Y +++++   +   +   
Sbjct: 26  LPKIIEIIFKKNNIGFYERKRIEWPNRIISTVNAIVTSALSIYCLYYNEWIVNSLRS--- 85

Query: 110 TFQSSTLSTFILGISVGYFLADLGLIIFLYPSLGGMEYVVHHSLSGLAVAYSVLSGEGQL 169
              +S +S FI      YF+ D  +  +    L     ++HH+++   ++++ L G+G  
Sbjct: 86  ---TSEMSYFIFKFITYYFIYDFIISSYYSKYLFTWGNLLHHTIA--LLSFTFLGGKGLA 145

Query: 170 YTYMV--LISEITTPEINMRWYLDTAGMKRSCAYLINGFVIFFAWLVARILLFGYTFYHV 229
           +  ++    +EITTP IN+R++L    +K    Y+ING +IF  +++ R+     T + V
Sbjct: 146 HHLLLSYTFTEITTPLINLRFFLLDLNLKNHPLYVINGLLIFVGFVLFRVFYTSATMFDV 205

Query: 230 YL---HYDQVIKMHVIGYILVFGVPTVLGMMNLMWFGKIVKGLMK 270
                HY  +    +I + + F  P +  ++NL W   I K + K
Sbjct: 206 IFNQPHY-SIETDPLIPFFINFVYPAIT-LLNLYWTFYISKSIFK 240

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BLAST of CmaCh18G005420 vs. TrEMBL
Match: A0A0A0M188_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G704090 PE=4 SV=1)

HSP 1 Score: 512.7 bits (1319), Expect = 2.8e-142
Identity = 259/274 (94.53%), Postives = 268/274 (97.81%), Query Frame = 1 

Query: 1   MAMSLKTVMAIKSYQSQADALVKNYLLADRFIPYTSVLGGMLACKLVYDLTQLVSNFYFK 60
           MAMSLKTVMAIKSYQSQADALVKNYLLAD F+P+TSVLGGMLACKLVYDLTQLVSNFYFK
Sbjct: 1   MAMSLKTVMAIKSYQSQADALVKNYLLADHFVPFTSVLGGMLACKLVYDLTQLVSNFYFK 60

Query: 61  SYLGLTKIQRVEWNNRGVSTIHAIYISIMSLYFVFWSDLFSDQRHAGLLTFQSSTLSTFI 120
           SYLGLTKIQRVEWNNRG+ST HAIYISIMSLYFVFWSDLFSDQRH GL+TFQSSTLSTFI
Sbjct: 61  SYLGLTKIQRVEWNNRGMSTFHAIYISIMSLYFVFWSDLFSDQRHPGLVTFQSSTLSTFI 120

Query: 121 LGISVGYFLADLGLIIFLYPSLGGMEYVVHHSLSGLAVAYSVLSGEGQLYTYMVLISEIT 180
           LGISVGYFLADLGLI++LYPSLGGMEYVVHH+LSGLAVAYSV SGEGQLYTYMVLISEIT
Sbjct: 121 LGISVGYFLADLGLIVWLYPSLGGMEYVVHHTLSGLAVAYSVFSGEGQLYTYMVLISEIT 180

Query: 181 TPEINMRWYLDTAGMKRSCAYLINGFVIFFAWLVARILLFGYTFYHVYLHYDQVIKMHVI 240
           TPEINMRWYLDTAGMKRSCAYLING VIFFAWL+ARILLFGYTFYHVYLHYDQVIKMHVI
Sbjct: 181 TPEINMRWYLDTAGMKRSCAYLINGIVIFFAWLIARILLFGYTFYHVYLHYDQVIKMHVI 240

Query: 241 GYILVFGVPTVLGMMNLMWFGKIVKGLMKTISKR 275
           GY+LVFGVPTVLGMMNLMWF KIVKGLMKTISKR
Sbjct: 241 GYLLVFGVPTVLGMMNLMWFAKIVKGLMKTISKR 274

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BLAST of CmaCh18G005420 vs. TrEMBL
Match: A0A067GQ24_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g023916mg PE=4 SV=1)

HSP 1 Score: 437.2 bits (1123), Expect = 1.5e-119
Identity = 212/275 (77.09%), Postives = 249/275 (90.55%), Query Frame = 1 

Query: 1   MAMSLKTVMAIKSYQSQADALVKNYLLADRFIPYTSVLGGMLACKLVYDLTQLVSNFYFK 60
           MAMS +TV AIKSYQ+QA  LVKNY++AD FIPYTS+L G+LACK+VYDLTQL+S FYFK
Sbjct: 1   MAMSEQTVTAIKSYQNQAQVLVKNYIIADPFIPYTSILAGLLACKVVYDLTQLISTFYFK 60

Query: 61  SYLGLTKIQRVEWNNRGVSTIHAIYISIMSLYFVFWSDLFSDQRHAGLLTFQSSTLSTFI 120
           +Y GLTKIQR+EWNNRG+ST+HAI+I+ +SLY+VFWSDLFSDQ+H G +TF+SS LS F 
Sbjct: 61  AYNGLTKIQRMEWNNRGISTVHAIFITALSLYYVFWSDLFSDQQHTGPITFRSSWLSNFG 120

Query: 121 LGISVGYFLADLGLIIFLYPSLGGMEYVVHHSLSGLAVAYSVLSGEGQLYTYMVLISEIT 180
           LG+SVGYFLADLG+I +LYPSLGGMEYVVHHSLSG+AVAYS+ SGEGQLYTYMVLISE+T
Sbjct: 121 LGVSVGYFLADLGMIFWLYPSLGGMEYVVHHSLSGIAVAYSMFSGEGQLYTYMVLISEVT 180

Query: 181 TPEINMRWYLDTAGMKRSCAYLINGFVIFFAWLVARILLFGYTFYHVYLHYDQVIKMHVI 240
           TPEINMRWYLDTAGMKRS  YL+NG +IFFAWL+ARILLF Y FYHVYLHYDQV++MH I
Sbjct: 181 TPEINMRWYLDTAGMKRSTTYLVNGVIIFFAWLIARILLFVYMFYHVYLHYDQVVEMHAI 240

Query: 241 GYILVFGVPTVLGMMNLMWFGKIVKGLMKTISKRR 276
           GY+LVF VP VL +MN+MWFGKI+KGL KT++KR+
Sbjct: 241 GYLLVFVVPFVLAIMNVMWFGKILKGLKKTLAKRQ 275

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BLAST of CmaCh18G005420 vs. TrEMBL
Match: V4UCT1_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10016228mg PE=4 SV=1)

HSP 1 Score: 434.1 bits (1115), Expect = 1.3e-118
Identity = 210/275 (76.36%), Postives = 248/275 (90.18%), Query Frame = 1 

Query: 1   MAMSLKTVMAIKSYQSQADALVKNYLLADRFIPYTSVLGGMLACKLVYDLTQLVSNFYFK 60
           MAMS +TV AIKSYQ+QA  LVKNY++AD FIPYTS+  G+LACK+VYDLTQL+S FYFK
Sbjct: 1   MAMSEQTVTAIKSYQNQAQVLVKNYIIADPFIPYTSIFAGLLACKVVYDLTQLISTFYFK 60

Query: 61  SYLGLTKIQRVEWNNRGVSTIHAIYISIMSLYFVFWSDLFSDQRHAGLLTFQSSTLSTFI 120
           +Y GLTKIQR+EWNNRG+ST+HAI+I+ +SLY+VFWSDLFSDQ+H G +TF+SS LS F 
Sbjct: 61  AYNGLTKIQRMEWNNRGISTVHAIFITALSLYYVFWSDLFSDQQHTGPITFRSSWLSNFG 120

Query: 121 LGISVGYFLADLGLIIFLYPSLGGMEYVVHHSLSGLAVAYSVLSGEGQLYTYMVLISEIT 180
           LG+SVGYFLADLG+I +LYPSLGGMEYVVHHSLSG+AVAYS+ SGEGQLYTYMVLISE+T
Sbjct: 121 LGVSVGYFLADLGMIFWLYPSLGGMEYVVHHSLSGIAVAYSMFSGEGQLYTYMVLISEVT 180

Query: 181 TPEINMRWYLDTAGMKRSCAYLINGFVIFFAWLVARILLFGYTFYHVYLHYDQVIKMHVI 240
           TPEINMRW+LDTAGMKRS AYL+NG +IFF WL+ARILLF Y FYHVYLHYDQV++MH I
Sbjct: 181 TPEINMRWFLDTAGMKRSTAYLVNGVIIFFTWLIARILLFVYMFYHVYLHYDQVVEMHAI 240

Query: 241 GYILVFGVPTVLGMMNLMWFGKIVKGLMKTISKRR 276
           GY+LVF VP VL +MN+MWFGKI+KGL KT++KR+
Sbjct: 241 GYLLVFVVPFVLAIMNVMWFGKILKGLKKTLAKRQ 275

[Close]
BLAST of CmaCh18G005420 vs. TrEMBL
Match: M5X7Q4_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa009826mg PE=4 SV=1)

HSP 1 Score: 433.0 bits (1112), Expect = 2.8e-118
Identity = 210/273 (76.92%), Postives = 247/273 (90.48%), Query Frame = 1 

Query: 1   MAMSLKTVMAIKSYQSQADALVKNYLLADRFIPYTSVLGGMLACKLVYDLTQLVSNFYFK 60
           M +S KTVMAIKSYQ+QA  LVKNYLLAD FIPYTS++GG++ CK+VYDLTQL+S+FY K
Sbjct: 1   MEVSTKTVMAIKSYQNQAGVLVKNYLLADPFIPYTSIIGGIILCKMVYDLTQLISSFYIK 60

Query: 61  SYLGLTKIQRVEWNNRGVSTIHAIYISIMSLYFVFWSDLFSDQRHAGLLTFQSSTLSTFI 120
           +Y GLTKIQR+EWN+RG+S+IHAI+I+ +SL+FVFWSDLFSDQ HAGL+TF+SS LS F 
Sbjct: 61  TYAGLTKIQRIEWNSRGISSIHAIFITALSLHFVFWSDLFSDQPHAGLVTFRSSPLSVFG 120

Query: 121 LGISVGYFLADLGLIIFLYPSLGGMEYVVHHSLSGLAVAYSVLSGEGQLYTYMVLISEIT 180
           LG+SVGYF ADLG++++LYPSLGGMEYV HHSLSG+AVAYS+ SGEGQLYTYM+LISEIT
Sbjct: 121 LGVSVGYFCADLGMLLWLYPSLGGMEYVFHHSLSGIAVAYSMFSGEGQLYTYMILISEIT 180

Query: 181 TPEINMRWYLDTAGMKRSCAYLINGFVIFFAWLVARILLFGYTFYHVYLHYDQVIKMHVI 240
           TPEINMRWYLDTAGMKRS AYLING VIF +WL ARILLFGY FYHVYLHYDQVI+MH  
Sbjct: 181 TPEINMRWYLDTAGMKRSSAYLINGIVIFLSWLAARILLFGYMFYHVYLHYDQVIQMHTF 240

Query: 241 GYILVFGVPTVLGMMNLMWFGKIVKGLMKTISK 274
           GY+LVF VP+VL +MNLMWFGKI+KGL+K ++K
Sbjct: 241 GYLLVFVVPSVLAIMNLMWFGKIIKGLIKQLAK 273

[Close]
BLAST of CmaCh18G005420 vs. TrEMBL
Match: A0A0B0MNG5_GOSAR (Transmembrane 56 OS=Gossypium arboreum GN=F383_10125 PE=4 SV=1)

HSP 1 Score: 428.3 bits (1100), Expect = 6.9e-117
Identity = 211/273 (77.29%), Postives = 245/273 (89.74%), Query Frame = 1 

Query: 3   MSLKTVMAIKSYQSQADALVKNYLLADRFIPYTSVLGGMLACKLVYDLTQLVSNFYFKSY 62
           M  +TVMAIKSYQ+QA  LVKNYL AD FIPYTS+LGG+LACK+ YDLTQL+SNFY K+Y
Sbjct: 4   MPKQTVMAIKSYQNQAQLLVKNYLFADPFIPYTSILGGILACKVAYDLTQLISNFYSKTY 63

Query: 63  LGLTKIQRVEWNNRGVSTIHAIYISIMSLYFVFWSDLFSDQRHAGLLTFQSSTLSTFILG 122
            GLTKIQRVEWNNRG+ST+HAI+IS +SLY VFWS+LFSD+  AGLL FQSS LSTF LG
Sbjct: 64  PGLTKIQRVEWNNRGISTVHAIFISALSLYLVFWSNLFSDEL-AGLLVFQSSPLSTFGLG 123

Query: 123 ISVGYFLADLGLIIFLYPSLGGMEYVVHHSLSGLAVAYSVLSGEGQLYTYMVLISEITTP 182
           +SVGYF++DL +I++LYPSLGG+EYV+HHSLSG+AVAYS+ +GE QLYTYMVLISE+TTP
Sbjct: 124 VSVGYFVSDLAMILWLYPSLGGIEYVIHHSLSGIAVAYSMFTGEAQLYTYMVLISEVTTP 183

Query: 183 EINMRWYLDTAGMKRSCAYLINGFVIFFAWLVARILLFGYTFYHVYLHYDQVIKMHVIGY 242
           EIN+RWYLDTAGMKRS AYLING VIF AWLVAR+LLFGY FYHVYLHY QVIKMH+ GY
Sbjct: 184 EINIRWYLDTAGMKRSTAYLINGIVIFLAWLVARVLLFGYMFYHVYLHYTQVIKMHIFGY 243

Query: 243 ILVFGVPTVLGMMNLMWFGKIVKGLMKTISKRR 276
           ILVFGVP VL  MNLMWFGKI+KG++KT++KR+
Sbjct: 244 ILVFGVPAVLATMNLMWFGKIIKGVLKTLAKRQ 275

[Close]
BLAST of CmaCh18G005420 vs. TAIR10
Match: AT1G31300.1 (AT1G31300.1 TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein)

HSP 1 Score: 401.7 bits (1031), Expect = 3.5e-112
Identity = 197/271 (72.69%), Postives = 235/271 (86.72%), Query Frame = 1 

Query: 4   SLKTVMAIKSYQSQADALVKNYLLADRFIPYTSVLGGMLACKLVYDLTQLVSNFYFKSYL 63
           SL+T+ AIKSY  QA  LVKNYLLAD FIPYTSVL G+  CK+VYDL   +SN + K+Y+
Sbjct: 5   SLQTIGAIKSYHHQAQHLVKNYLLADPFIPYTSVLTGIFLCKVVYDLCHFISNSHSKTYI 64

Query: 64  GLTKIQRVEWNNRGVSTIHAIYISIMSLYFVFWSDLFSDQRHAGLLTFQSSTLSTFILGI 123
            LTKIQR+EWNNRG+ST+HAI+IS MSLYFVFWSDLFSD+ H  L+ F+SS LS+  LGI
Sbjct: 65  ILTKIQRIEWNNRGISTVHAIFISAMSLYFVFWSDLFSDRWHNDLVVFRSSRLSSLGLGI 124

Query: 124 SVGYFLADLGLIIFLYPSLGGMEYVVHHSLSGLAVAYSVLSGEGQLYTYMVLISEITTPE 183
           S+GYFLADLG+I + YPSLGG+EY+VHHSLSG+AVAYS+ SGEGQLYTYMVLISEITTPE
Sbjct: 125 SIGYFLADLGMIFWKYPSLGGIEYIVHHSLSGVAVAYSLFSGEGQLYTYMVLISEITTPE 184

Query: 184 INMRWYLDTAGMKRSCAYLINGFVIFFAWLVARILLFGYTFYHVYLHYDQVIKMHVIGYI 243
           IN+RWYLDTAGMK+S AY++NG  IF AWLVARILLF Y FYHVYLHY+QV++MH+ GY+
Sbjct: 185 INLRWYLDTAGMKKSLAYVVNGVFIFLAWLVARILLFIYMFYHVYLHYNQVMRMHIFGYV 244

Query: 244 LVFGVPTVLGMMNLMWFGKIVKGLMKTISKR 275
           LVFGVP  LG+MNL+WFGKIV+G+ KT++KR
Sbjct: 245 LVFGVPAALGVMNLIWFGKIVRGVKKTLAKR 275

[Close]
BLAST of CmaCh18G005420 vs. TAIR10
Match: AT4G19645.1 (AT4G19645.1 TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein)

HSP 1 Score: 379.8 bits (974), Expect = 1.4e-105
Identity = 191/268 (71.27%), Postives = 225/268 (83.96%), Query Frame = 1 

Query: 9   MAIKSYQSQADALVKNYLLADRFIPYTSVLGGMLACKLVYDLTQLVSNFYFKSYLGLTKI 68
           M IKSYQ+QA+  V++YLLAD F+PYTSVL G+  CKLVYDLT+L S+ + KSY  LTKI
Sbjct: 1   MEIKSYQNQAEYFVEHYLLADPFLPYTSVLVGICLCKLVYDLTELFSSIHVKSYSALTKI 60

Query: 69  QRVEWNNRGVSTIHAIYISIMSLYFVFWSDLFSDQRHAGLLT-FQSSTLSTFILGISVGY 128
           +R+EWNNRG+ST+HAI+IS M+LYF F+SDLFSDQR    LT F++S LSTF LG+SVGY
Sbjct: 61  KRIEWNNRGISTVHAIFISFMALYFAFFSDLFSDQRSLETLTVFRNSPLSTFGLGVSVGY 120

Query: 129 FLADLGLIIFLYPSLGGMEYVVHHSLSGLAVAYSVLSGEGQLYTYMVLISEITTPEINMR 188
           FLADLG+I +LYPSLGG EY++HH LSG AVAYS+ SGE QLYTYMVLISE+TTPEIN+R
Sbjct: 121 FLADLGMIFWLYPSLGGSEYILHHCLSGTAVAYSLFSGEAQLYTYMVLISEVTTPEINLR 180

Query: 189 WYLDTAGMKRSCAYLINGFVIFFAWLVARILLFGYTFYHVYLHYDQVIKMHVIGYILVFG 248
           WYLD AG+KRS AYL+NG  IFFAWL ARILLF Y FYHVY HYDQVI+MH  GY+LVF 
Sbjct: 181 WYLDIAGLKRSKAYLVNGVAIFFAWLTARILLFIYMFYHVYTHYDQVIEMHTFGYLLVFV 240

Query: 249 VPTVLGMMNLMWFGKIVKGLMKTISKRR 276
           VP  L +MNL+WFGKIVKGL KT+ KR+
Sbjct: 241 VPISLSVMNLIWFGKIVKGLKKTLEKRQ 268

[Close]
BLAST of CmaCh18G005420 vs. TAIR10
Match: AT4G10360.1 (AT4G10360.1 TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein)

HSP 1 Score: 238.4 bits (607), Expect = 5.2e-63
Identity = 117/251 (46.61%), Postives = 169/251 (67.33%), Query Frame = 1 

Query: 25  YLLADRFIPYTSVLGGMLACKLVYDLTQLVSNFYFKSYLGLTKIQRVEWNNRGVSTIHAI 84
           ++ + + +   S+  G L CK+VYDLT+ +S   F  Y  L    R+EWNNRG ST HA+
Sbjct: 9   FVSSRQLLLLASICSGALMCKIVYDLTRFISPLLFSVYGKLDSKVRMEWNNRGFSTFHAV 68

Query: 85  YISIMSLYFVFWSDLFSDQRHAGLLTFQSSTLSTFILGISVGYFLADLGLIIFLYPSLGG 144
           + S+ S+YF+  SD F +  H   +   ++ LS  ++GIS+GYFLADL +I + +P+LGG
Sbjct: 69  FTSVASIYFLVISDQFDENVHGDSVINSTTRLSESVMGISLGYFLADLAMIFWYFPTLGG 128

Query: 145 MEYVVHHSLSGLAVAYSVLSGEGQLYTYMVLISEITTPEINMRWYLDTAGMKRSCAYLIN 204
           +EYV HH LS  A+  SV SG+ Q Y ++VL+SE TTP +N+RWYLD +G K S AY +N
Sbjct: 129 IEYVFHHFLSMFAIILSVTSGQSQFYIFLVLLSEATTPFVNLRWYLDNSGQKGSKAYTLN 188

Query: 205 GFVIFFAWLVARILLFGYTFYHVYLHYDQVIKMHVIGYILVFGVPTVLGMMNLMWFGKIV 264
           G  +F  WLVAR+LLF + F H+YLH+ QV ++  +G+  +  +P  L +MNL+WF KI 
Sbjct: 189 GIALFLGWLVARVLLFIFFFVHMYLHFHQVKQVFPLGFYSLLTIPPALAVMNLLWFWKIT 248

Query: 265 KGLMKTISKRR 276
           KGL+KT+SK +
Sbjct: 249 KGLIKTLSKAK 259

[Close]
BLAST of CmaCh18G005420 vs. NCBI nr
Match: gi|659118379|ref|XP_008459089.1| (PREDICTED: transmembrane protein 56-B-like [Cucumis melo])

HSP 1 Score: 517.7 bits (1332), Expect = 1.2e-143
Identity = 261/274 (95.26%), Postives = 270/274 (98.54%), Query Frame = 1 

Query: 1   MAMSLKTVMAIKSYQSQADALVKNYLLADRFIPYTSVLGGMLACKLVYDLTQLVSNFYFK 60
           MAMSLKTVMAIKSYQSQADALVKNYLLAD F+P+TSVLGGMLACKL+YDLTQLVSNFYFK
Sbjct: 1   MAMSLKTVMAIKSYQSQADALVKNYLLADHFVPFTSVLGGMLACKLIYDLTQLVSNFYFK 60

Query: 61  SYLGLTKIQRVEWNNRGVSTIHAIYISIMSLYFVFWSDLFSDQRHAGLLTFQSSTLSTFI 120
           SYLGLTKIQRVEWNNRG+ST HAIYISIMSLYFVFWSDLFSDQRHAGL+TFQSSTLSTFI
Sbjct: 61  SYLGLTKIQRVEWNNRGMSTFHAIYISIMSLYFVFWSDLFSDQRHAGLVTFQSSTLSTFI 120

Query: 121 LGISVGYFLADLGLIIFLYPSLGGMEYVVHHSLSGLAVAYSVLSGEGQLYTYMVLISEIT 180
           LGISVGYFLADLGLI++LYPSLGGMEYVVHHSLSGLAVAYSV SGEGQLYTYMVLISEIT
Sbjct: 121 LGISVGYFLADLGLIVWLYPSLGGMEYVVHHSLSGLAVAYSVFSGEGQLYTYMVLISEIT 180

Query: 181 TPEINMRWYLDTAGMKRSCAYLINGFVIFFAWLVARILLFGYTFYHVYLHYDQVIKMHVI 240
           TPEINMRWYLDTAGMKRSCAYLING VIFFAWL+ARILLFGYTFYHVYLHYDQVIKMHVI
Sbjct: 181 TPEINMRWYLDTAGMKRSCAYLINGIVIFFAWLIARILLFGYTFYHVYLHYDQVIKMHVI 240

Query: 241 GYILVFGVPTVLGMMNLMWFGKIVKGLMKTISKR 275
           GY+LVFGVPTVLGMMNLMWFGKIVKGLMKTISKR
Sbjct: 241 GYLLVFGVPTVLGMMNLMWFGKIVKGLMKTISKR 274

[Close]
BLAST of CmaCh18G005420 vs. NCBI nr
Match: gi|778664572|ref|XP_011660315.1| (PREDICTED: transmembrane protein 56-B [Cucumis sativus])

HSP 1 Score: 512.7 bits (1319), Expect = 4.0e-142
Identity = 259/274 (94.53%), Postives = 268/274 (97.81%), Query Frame = 1 

Query: 1   MAMSLKTVMAIKSYQSQADALVKNYLLADRFIPYTSVLGGMLACKLVYDLTQLVSNFYFK 60
           MAMSLKTVMAIKSYQSQADALVKNYLLAD F+P+TSVLGGMLACKLVYDLTQLVSNFYFK
Sbjct: 1   MAMSLKTVMAIKSYQSQADALVKNYLLADHFVPFTSVLGGMLACKLVYDLTQLVSNFYFK 60

Query: 61  SYLGLTKIQRVEWNNRGVSTIHAIYISIMSLYFVFWSDLFSDQRHAGLLTFQSSTLSTFI 120
           SYLGLTKIQRVEWNNRG+ST HAIYISIMSLYFVFWSDLFSDQRH GL+TFQSSTLSTFI
Sbjct: 61  SYLGLTKIQRVEWNNRGMSTFHAIYISIMSLYFVFWSDLFSDQRHPGLVTFQSSTLSTFI 120

Query: 121 LGISVGYFLADLGLIIFLYPSLGGMEYVVHHSLSGLAVAYSVLSGEGQLYTYMVLISEIT 180
           LGISVGYFLADLGLI++LYPSLGGMEYVVHH+LSGLAVAYSV SGEGQLYTYMVLISEIT
Sbjct: 121 LGISVGYFLADLGLIVWLYPSLGGMEYVVHHTLSGLAVAYSVFSGEGQLYTYMVLISEIT 180

Query: 181 TPEINMRWYLDTAGMKRSCAYLINGFVIFFAWLVARILLFGYTFYHVYLHYDQVIKMHVI 240
           TPEINMRWYLDTAGMKRSCAYLING VIFFAWL+ARILLFGYTFYHVYLHYDQVIKMHVI
Sbjct: 181 TPEINMRWYLDTAGMKRSCAYLINGIVIFFAWLIARILLFGYTFYHVYLHYDQVIKMHVI 240

Query: 241 GYILVFGVPTVLGMMNLMWFGKIVKGLMKTISKR 275
           GY+LVFGVPTVLGMMNLMWF KIVKGLMKTISKR
Sbjct: 241 GYLLVFGVPTVLGMMNLMWFAKIVKGLMKTISKR 274

[Close]
BLAST of CmaCh18G005420 vs. NCBI nr
Match: gi|1009108082|ref|XP_015882960.1| (PREDICTED: transmembrane protein 56-B [Ziziphus jujuba])

HSP 1 Score: 439.5 bits (1129), Expect = 4.3e-120
Identity = 217/275 (78.91%), Postives = 248/275 (90.18%), Query Frame = 1 

Query: 1   MAMSLKTVMAIKSYQSQADALVKNYLLADRFIPYTSVLGGMLACKLVYDLTQLVSNFYFK 60
           MAMS KTVMAIKSYQSQA+ LVKNYLL+D FIPYTS+LGG+  CKLVYDLTQL+S FYFK
Sbjct: 29  MAMSKKTVMAIKSYQSQAEVLVKNYLLSDPFIPYTSILGGIFLCKLVYDLTQLISTFYFK 88

Query: 61  SYLGLTKIQRVEWNNRGVSTIHAIYISIMSLYFVFWSDLFSDQRHAGLLTFQSSTLSTFI 120
           SY  LTK+QR+EWNNRG+ST+HAI+I+  SLYFVFWSDLFSDQ+ AG++TF+SS +STF 
Sbjct: 89  SYASLTKMQRIEWNNRGISTVHAIFITATSLYFVFWSDLFSDQQLAGIVTFRSSPMSTFA 148

Query: 121 LGISVGYFLADLGLIIFLYPSLGGMEYVVHHSLSGLAVAYSVLSGEGQLYTYMVLISEIT 180
           LG+SVGYF ADL +I++LYPSLGGMEYVVHHSLSG+AVAYS+LSGEGQLYT+MVLISEIT
Sbjct: 149 LGVSVGYFSADLLMILWLYPSLGGMEYVVHHSLSGIAVAYSMLSGEGQLYTFMVLISEIT 208

Query: 181 TPEINMRWYLDTAGMKRSCAYLINGFVIFFAWLVARILLFGYTFYHVYLHYDQVIKMHVI 240
           TPE+NMRWYLDTAGMKRS AYLING  IFFAWL ARILLFGY FYHVYLHYDQVI+MH+ 
Sbjct: 209 TPEVNMRWYLDTAGMKRSSAYLINGIAIFFAWLGARILLFGYMFYHVYLHYDQVIQMHIF 268

Query: 241 GYILVFGVPTVLGMMNLMWFGKIVKGLMKTISKRR 276
           GY LVF VP+VL  MNLMWFGKI+KGL K ++KR+
Sbjct: 269 GYFLVFVVPSVLATMNLMWFGKILKGLKKQLAKRQ 303

[Close]
BLAST of CmaCh18G005420 vs. NCBI nr
Match: gi|568828222|ref|XP_006468443.1| (PREDICTED: transmembrane protein 56-B [Citrus sinensis])

HSP 1 Score: 437.2 bits (1123), Expect = 2.1e-119
Identity = 212/275 (77.09%), Postives = 249/275 (90.55%), Query Frame = 1 

Query: 1   MAMSLKTVMAIKSYQSQADALVKNYLLADRFIPYTSVLGGMLACKLVYDLTQLVSNFYFK 60
           MAMS +TV AIKSYQ+QA  LVKNY++AD FIPYTS+L G+LACK+VYDLTQL+S FYFK
Sbjct: 1   MAMSEQTVTAIKSYQNQAQVLVKNYIIADPFIPYTSILAGLLACKVVYDLTQLISTFYFK 60

Query: 61  SYLGLTKIQRVEWNNRGVSTIHAIYISIMSLYFVFWSDLFSDQRHAGLLTFQSSTLSTFI 120
           +Y GLTKIQR+EWNNRG+ST+HAI+I+ +SLY+VFWSDLFSDQ+H G +TF+SS LS F 
Sbjct: 61  AYNGLTKIQRMEWNNRGISTVHAIFITALSLYYVFWSDLFSDQQHTGPITFRSSWLSNFG 120

Query: 121 LGISVGYFLADLGLIIFLYPSLGGMEYVVHHSLSGLAVAYSVLSGEGQLYTYMVLISEIT 180
           LG+SVGYFLADLG+I +LYPSLGGMEYVVHHSLSG+AVAYS+ SGEGQLYTYMVLISE+T
Sbjct: 121 LGVSVGYFLADLGMIFWLYPSLGGMEYVVHHSLSGIAVAYSMFSGEGQLYTYMVLISEVT 180

Query: 181 TPEINMRWYLDTAGMKRSCAYLINGFVIFFAWLVARILLFGYTFYHVYLHYDQVIKMHVI 240
           TPEINMRWYLDTAGMKRS  YL+NG +IFFAWL+ARILLF Y FYHVYLHYDQV++MH I
Sbjct: 181 TPEINMRWYLDTAGMKRSTTYLVNGVIIFFAWLIARILLFVYMFYHVYLHYDQVVEMHAI 240

Query: 241 GYILVFGVPTVLGMMNLMWFGKIVKGLMKTISKRR 276
           GY+LVF VP VL +MN+MWFGKI+KGL KT++KR+
Sbjct: 241 GYLLVFVVPFVLAIMNVMWFGKILKGLKKTLAKRQ 275

[Close]
BLAST of CmaCh18G005420 vs. NCBI nr
Match: gi|470115083|ref|XP_004293733.1| (PREDICTED: transmembrane protein 56-B-like isoform X2 [Fragaria vesca subsp. vesca])

HSP 1 Score: 434.1 bits (1115), Expect = 1.8e-118
Identity = 211/275 (76.73%), Postives = 250/275 (90.91%), Query Frame = 1 

Query: 1   MAMSLKTVMAIKSYQSQADALVKNYLLADRFIPYTSVLGGMLACKLVYDLTQLVSNFYFK 60
           MA+  KT MAIKSYQ+QA+ LVK+YLLAD F+PYTSV+GG+  CKLVYDLTQL+S FY K
Sbjct: 1   MAVPRKTAMAIKSYQNQAEDLVKSYLLADPFMPYTSVIGGIFLCKLVYDLTQLISTFYIK 60

Query: 61  SYLGLTKIQRVEWNNRGVSTIHAIYISIMSLYFVFWSDLFSDQRHAGLLTFQSSTLSTFI 120
           SY  LTKIQR+EWN+RG+S+IHAI+I+++SLYFVFWSDLFSDQ+ AGL+TF+SS+LS F 
Sbjct: 61  SYASLTKIQRIEWNSRGISSIHAIFITVLSLYFVFWSDLFSDQQLAGLVTFRSSSLSVFG 120

Query: 121 LGISVGYFLADLGLIIFLYPSLGGMEYVVHHSLSGLAVAYSVLSGEGQLYTYMVLISEIT 180
           LG+SVGYF ADLG++++LYPSLGGMEYV+HHSL+G+AVAYS+ SGEGQLYTYM+LISEIT
Sbjct: 121 LGVSVGYFCADLGMLLWLYPSLGGMEYVLHHSLAGIAVAYSMFSGEGQLYTYMILISEIT 180

Query: 181 TPEINMRWYLDTAGMKRSCAYLINGFVIFFAWLVARILLFGYTFYHVYLHYDQVIKMHVI 240
           TPEINMRWYLDTAGMKRS AYLING VIFF+WL ARILLFGY FYHVYLHYDQVI+MH+ 
Sbjct: 181 TPEINMRWYLDTAGMKRSSAYLINGIVIFFSWLGARILLFGYMFYHVYLHYDQVIQMHIF 240

Query: 241 GYILVFGVPTVLGMMNLMWFGKIVKGLMKTISKRR 276
           GY+LVF VP VL +MNLMWFGKI+KGL+K +SKR+
Sbjct: 241 GYMLVFAVPAVLAIMNLMWFGKIIKGLIKQLSKRQ 275

The following BLAST results are available for this feature:
BLAST of CmaCh18G005420 vs. Swiss-Prot
Match NameE-valueIdentityDescription
TMM56_MOUSE4.9e-1528.37Transmembrane protein 56 OS=Mus musculus GN=Tmem56 PE=2 SV=1[more]
TMM56_HUMAN2.4e-1429.31Transmembrane protein 56 OS=Homo sapiens GN=TMEM56 PE=1 SV=1[more]
TM56B_XENLA5.4e-1429.30Transmembrane protein 56-B OS=Xenopus laevis GN=tmem56-b PE=2 SV=1[more]
TM56B_DICDI8.7e-1225.78Transmembrane protein 56 homolog B OS=Dictyostelium discoideum GN=tmem56b PE=3 S... [more]
BLAST of CmaCh18G005420 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0M188_CUCSA2.8e-14294.53Uncharacterized protein OS=Cucumis sativus GN=Csa_1G704090 PE=4 SV=1[more]
A0A067GQ24_CITSI1.5e-11977.09Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g023916mg PE=4 SV=1[more]
V4UCT1_9ROSI1.3e-11876.36Uncharacterized protein OS=Citrus clementina GN=CICLE_v10016228mg PE=4 SV=1[more]
M5X7Q4_PRUPE2.8e-11876.92Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa009826mg PE=4 SV=1[more]
A0A0B0MNG5_GOSAR6.9e-11777.29Transmembrane 56 OS=Gossypium arboreum GN=F383_10125 PE=4 SV=1[more]
BLAST of CmaCh18G005420 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G31300.13.5e-11272.69 TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein[more]
AT4G19645.11.4e-10571.27 TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein[more]
AT4G10360.15.2e-6346.61 TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein[more]
BLAST of CmaCh18G005420 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659118379|ref|XP_008459089.1|1.2e-14395.26PREDICTED: transmembrane protein 56-B-like [Cucumis melo][more]
gi|778664572|ref|XP_011660315.1|4.0e-14294.53PREDICTED: transmembrane protein 56-B [Cucumis sativus][more]
gi|1009108082|ref|XP_015882960.1|4.3e-12078.91PREDICTED: transmembrane protein 56-B [Ziziphus jujuba][more]
gi|568828222|ref|XP_006468443.1|2.1e-11977.09PREDICTED: transmembrane protein 56-B [Citrus sinensis][more]
gi|470115083|ref|XP_004293733.1|1.8e-11876.73PREDICTED: transmembrane protein 56-B-like isoform X2 [Fragaria vesca subsp. ves... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR006634TLC-dom
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006508 proteolysis
biological_process GO:0008150 biological_process
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0004190 aspartic-type endopeptidase activity
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh18G005420.1CmaCh18G005420.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006634TRAM/LAG1/CLN8 homology domainPFAMPF03798TRAM_LAG1_CLN8coord: 72..265
score: 3.7
IPR006634TRAM/LAG1/CLN8 homology domainSMARTSM00724lag1_27coord: 68..272
score: 2.6
IPR006634TRAM/LAG1/CLN8 homology domainPROFILEPS50922TLCcoord: 68..272
score: 33
NoneNo IPR availablePANTHERPTHR13439CT120 PROTEINcoord: 26..273
score: 3.5E
NoneNo IPR availablePANTHERPTHR13439:SF17SUBFAMILY NOT NAMEDcoord: 26..273
score: 3.5E

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmaCh18G005420Cucsa.236400Cucumber (Gy14) v1cgycmaB0655
CmaCh18G005420Cla009188Watermelon (97103) v1cmawmB380
CmaCh18G005420Csa1G704090Cucumber (Chinese Long) v2cmacuB394
CmaCh18G005420MELO3C021799Melon (DHL92) v3.5.1cmameB364
CmaCh18G005420ClCG01G009070Watermelon (Charleston Gray)cmawcgB342
CmaCh18G005420CSPI01G34560Wild cucumber (PI 183967)cmacpiB398
CmaCh18G005420CmoCh18G005200Cucurbita moschata (Rifu)cmacmoB407
CmaCh18G005420CmoCh13G004770Cucurbita moschata (Rifu)cmacmoB398
CmaCh18G005420Lsi02G010200Bottle gourd (USVL1VR-Ls)cmalsiB369
CmaCh18G005420Cp4.1LG09g06980Cucurbita pepo (Zucchini)cmacpeB415
CmaCh18G005420Cp4.1LG20g05900Cucurbita pepo (Zucchini)cmacpeB438
CmaCh18G005420MELO3C021799.2Melon (DHL92) v3.6.1cmamedB417
CmaCh18G005420CsaV3_1G046450Cucumber (Chinese Long) v3cmacucB0470
CmaCh18G005420Cla97C01G009340Watermelon (97103) v2cmawmbB394
CmaCh18G005420Bhi08G000773Wax gourdcmawgoB0532
CmaCh18G005420CsGy1G033040Cucumber (Gy14) v2cgybcmaB090
CmaCh18G005420Carg25408Silver-seed gourdcarcmaB0623
CmaCh18G005420Carg21439Silver-seed gourdcarcmaB0552
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
CmaCh18G005420CmaCh13G004430Cucurbita maxima (Rimu)cmacmaB216
The following block(s) are covering this gene:
GeneOrganismBlock
CmaCh18G005420Cucumber (Chinese Long) v3cmacucB0477
CmaCh18G005420Cucumber (Gy14) v1cgycmaB0656
CmaCh18G005420Wild cucumber (PI 183967)cmacpiB404
CmaCh18G005420Cucumber (Chinese Long) v2cmacuB400
CmaCh18G005420Melon (DHL92) v3.5.1cmameB359
CmaCh18G005420Cucumber (Gy14) v2cgybcmaB096
CmaCh18G005420Melon (DHL92) v3.6.1cmamedB423