CmaCh18G004970 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh18G004970
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	Glucan endo-1,3-beta-glucosidase 13
Location	Cma_Chr18 : 2905513 .. 2908181 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATAATTTCCTTTGAAGAAACTAATGATTCTTCTTCGCCCATAAACAAAACTAAACTCTTTCATTCATTTATAATGCCTTCTTGTTCTTCCTTCTTCTTCACCTCTTTCATTCAATACAATCAAAATGAGTATACAAATTTGGGGTTTGGTGGCCCTTTTTCTGCTGCAATCTTTCCTTATGGGTATGTTTTTTTTTCTCTGAAAACGACATTTTTATGTCGTTTTTGCTTCATATGTTCTTGTTTTCTATCTGGTGTGTTTTTTTTTTTCTCACTAGAAACTCCATTTTTGTGTCGTTTTTGCGTCAAATGCTCTTGATTACTATCTGGGTATGTGTTTTTCTCACTAGAAACTCCATTTTTGTGTCATTTTTGCTTCAAATGCTCTTATTTTCTATCTGGGTATGTTCTTTTTTTTGTCATAAAATCTCTATTTTTATGTCATTTTTGCTTCAAATGCTCTTGTTTTCTATCTGGGCATGTTTTTTTTTCTCATAAAAACTCCATTTTTATGCCATTTTTGCTTCNAATTCTCTAGTTTTCCATTTGGGTATGTTTTTTTTTCTCATAAAAACTCCATTTTTATGTCATTTTTGCTTCAAATTCTCAAATTTTCTATCTGGGTATGCTTTTTTCTCGTTAAAAACTCCATGTTTATGCCATTTTTGCTTCAAGAACTCTCATTTTTCATCTGGGTATGTTTTTTTTCACTAAAAACTCCATTTTATGCCATTTTTGCTTCAAAATCTCTCATTTTCTATCAGGGTATGTTTTTTTCTCGCTAGAAACTCAATTTTTATGCCATTTTTGCTTCAAATGCTCTTATTTTCCATCTGGGTATGTTTTTTTCTCACTAAAAACTCCATTTTCATGCCATTTTAGCTTCAAACACTCTCATTTTCCATCTGGGTATGTTTTTATCTTCATCTCGTTCTCAAATCAAGGAAAACCCATCACGTCTCTTCATCTAAATACCTCTATTTCCCCCTAACATTCTCGCAAATCTTGGTTCTTATTCACTACTTCCTTAAAAACAGGGGAAGCAATGGCGACGGCGGTGGCAGTGGAGAAGGCAGAGGCGTCAATGCCAATGACAACATGGTCGCCGCCGGAAGGGAACACGACGTTCTTGGACGGAACTTCATGGTGCGTGGCTAAGCCAGGAGTGTCCCAGATCGATCTACAAAACGCGTTGGACTGGGCGTGCGGATTGGGAAAGGCCGACTGCAGAGCCATCCAAAAGGGAGGGCGTTGCTATCAACCGGACACGCTGTTTTCTCATGCTTCTTATGCGTTTAATAGCTATTATCAACAGAATGGAAACTCTGATATTGCTTGCAACTTTGGTGGCTCTGCTACTTTAACCAAAAGAGATCCAAGTAAAATCCTAATCTCTTTTCTCGCTCGGTTTTAGTTTAGTTTCGATCGTATTTACGAGTAAAATTCTCTTTTATTTCGAGTCAAAATGTTTTAACTACTTAACTAGTCGGTACATACATGTGAATGTTCGGAAACAGTGATAAGTAAATATTCAGTTCTAACCTTTAATCATCATTTTTCGATTACTTTTCTTTATTGTATGCATTTTCATGCTTAGATCAAAATATTTGGTCGTAGAGATGTTTAACAATACAAAGAAGAATTAAGTAGAAATTCGACATTATTGTAAGGAAAAAACGAATCATTTGAATTGGGTATAAAAAAATTTGACAATATTAAATATATGTATATATATGTGTGTGAAATCTCACGTTGGTTGTGTCGGTTGGAGAAGAGAACGAAACATTCGAGAATAATATCTGTTGGATGAAGTCCCAAAGCTTATGCTCGAAGTGGACAATTTCATATCATTGTAGAGAGTCGTGTTCATTTAACAATATCCTTGAAGGCAGTTAAAAATGACTAAGACTCCAAAGAAGTCGATGCGTACTTTATTTGAGGGGAGGTGTTGGATGAAAATGTCTCATATTGGTTAATTTAGGAAATAGTCATGCGTTTATAATCTAAGAATACACTCTCCATTGATATGAGTCATTTTGGAAAGTCCGAAGCAAAGTCATTTGAGCATATCATACCATCCTCTATTCGTGAATTTAGATTGCTACCATTTATTTATCGAAGATCTACCCATAACCATATTCCTCTTTACAATGCCCTTTTGTTTTTACAGGTTATGGGAAATGTGACTATTCAGCATCTAGGTATATTTACTTCACATGGAATTTAAGAATAATAATAATAGTAAAAAAAATCTTAATTTCTAAATTTTTAAATTTACGTCTATTTGATTTATAAACTTTAAACCCGTTTGATAGATTTTTAATTTTGTATTTAATAAGTTATTCATGATTTATTAATTATAAAAATTAAATATATAGAAAATTTATGGCCCATTAAACAAAAAATTGAGAAAATTTTTTAAAGTGTAGGGATCGAACAGTAAAAGGTTTAAAGTATAAGGACTAAACTTGCAATTTGATATAAAATAATTATTTTATTTATTTATTTGAATGGACCTCAGGTCAGCGAGCTCAGCACCTTCGAAGTGGAAGAAGAATGGAAGCCGTGGCTGCCTGCAATTGGTTGGTGGGATTTGGATGGTTATGAATTTATATTTTGGAAGTTGATATTTATTTTAATAATAAATAGTGGGAGGGACTTAAATGCAAA

mRNA sequence

ATAATTTCCTTTGAAGAAACTAATGATTCTTCTTCGCCCATAAACAAAACTAAACTCTTTCATTCATTTATAATGCCTTCTTGTTCTTCCTTCTTCTTCACCTCTTTCATTCAATACAATCAAAATGAGTATACAAATTTGGGGTTTGGTGGCCCTTTTTCTGCTGCAATCTTTCCTTATGGGGGAAGCAATGGCGACGGCGGTGGCAGTGGAGAAGGCAGAGGCGTCAATGCCAATGACAACATGGTCGCCGCCGGAAGGGAACACGACGTTCTTGGACGGAACTTCATGGTGCGTGGCTAAGCCAGGAGTGTCCCAGATCGATCTACAAAACGCGTTGGACTGGGCGTGCGGATTGGGAAAGGCCGACTGCAGAGCCATCCAAAAGGGAGGGCGTTGCTATCAACCGGACACGCTGTTTTCTCATGCTTCTTATGCGTTTAATAGCTATTATCAACAGAATGGAAACTCTGATATTGCTTGCAACTTTGGTGGCTCTGCTACTTTAACCAAAAGAGATCCAAGTTATGGGAAATGTGACTATTCAGCATCTAGGTCAGCGAGCTCAGCACCTTCGAAGTGGAAGAAGAATGGAAGCCGTGGCTGCCTGCAATTGGTTGGTGGGATTTGGATGGTTATGAATTTATATTTTGGAAGTTGATATTTATTTTAATAATAAATAGTGGGAGGGACTTAAATGCAAA

Coding sequence (CDS)

ATGAGTATACAAATTTGGGGTTTGGTGGCCCTTTTTCTGCTGCAATCTTTCCTTATGGGGGAAGCAATGGCGACGGCGGTGGCAGTGGAGAAGGCAGAGGCGTCAATGCCAATGACAACATGGTCGCCGCCGGAAGGGAACACGACGTTCTTGGACGGAACTTCATGGTGCGTGGCTAAGCCAGGAGTGTCCCAGATCGATCTACAAAACGCGTTGGACTGGGCGTGCGGATTGGGAAAGGCCGACTGCAGAGCCATCCAAAAGGGAGGGCGTTGCTATCAACCGGACACGCTGTTTTCTCATGCTTCTTATGCGTTTAATAGCTATTATCAACAGAATGGAAACTCTGATATTGCTTGCAACTTTGGTGGCTCTGCTACTTTAACCAAAAGAGATCCAAGTTATGGGAAATGTGACTATTCAGCATCTAGGTCAGCGAGCTCAGCACCTTCGAAGTGGAAGAAGAATGGAAGCCGTGGCTGCCTGCAATTGGTTGGTGGGATTTGGATGGTTATGAATTTATATTTTGGAAGTTGA

Protein sequence

MSIQIWGLVALFLLQSFLMGEAMATAVAVEKAEASMPMTTWSPPEGNTTFLDGTSWCVAKPGVSQIDLQNALDWACGLGKADCRAIQKGGRCYQPDTLFSHASYAFNSYYQQNGNSDIACNFGGSATLTKRDPSYGKCDYSASRSASSAPSKWKKNGSRGCLQLVGGIWMVMNLYFGS

Homology

[Close]

BLAST of CmaCh18G004970 vs. Swiss-Prot
Match: E1313_ARATH (Glucan endo-1,3-beta-glucosidase 13 OS=Arabidopsis thaliana GN=At5g56590 PE=1 SV=1)

HSP 1 Score: 116.7 bits (291), Expect = 2.6e-25
Identity = 58/142 (40.85%), Postives = 82/142 (57.75%), Query Frame = 1


Query: 42  SPPEGNTTFLDGTSWCVAKPGVSQIDLQNALDWACGLGKADCRAIQKGGRCYQPDTLFSH 101
           S   G  +     SWC+A    S+ DL+ ALDWACG G  DC AIQ    C+QPDTL SH
Sbjct: 355 SNSSGTNSSGSSNSWCIASSKASERDLKGALDWACGPGNVDCTAIQPSQPCFQPDTLVSH 414

Query: 102 ASYAFNSYYQQNGNSDIACNFGGSATLTKRDPSYGKCDY-------SASRSASSAPSKWK 161
           AS+ FNSY+QQN  +D+AC+FGG+     +DPSY KC Y       + + +A++  S   
Sbjct: 415 ASFVFNSYFQQNRATDVACSFGGAGVKVNKDPSYDKCIYITAGGNKTKATNATALTSSAS 474

Query: 162 KNGSRGCLQLVGGIWMVMNLYF 177
                  LQ +  + ++++L+F
Sbjct: 475 TPRGNELLQWILKLCLMISLFF 496

[Close]

BLAST of CmaCh18G004970 vs. Swiss-Prot
Match: E1312_ARATH (Glucan endo-1,3-beta-glucosidase 12 OS=Arabidopsis thaliana GN=At4g29360 PE=1 SV=1)

HSP 1 Score: 110.9 bits (276), Expect = 1.4e-23
Identity = 56/129 (43.41%), Postives = 71/129 (55.04%), Query Frame = 1


Query: 20  GEAMATAVAVEKAEASMPMTTWSPP-EGNTTFLDG-------TSWCVAKPGVSQIDLQNA 79
           GE             + P  + SP   GN+T   G         WC+A    S  +LQ A
Sbjct: 347 GENTTPVSPTNSTTGTSPSPSSSPIINGNSTVTIGGGGGGGTKKWCIASSQASVTELQTA 406

Query: 80  LDWACGLGKADCRAIQKGGRCYQPDTLFSHASYAFNSYYQQNGNSDIACNFGGSATLTKR 139
           LDWACG G  DC A+Q    C++PDT+ SHASYAFN+YYQQ+G S I C+F G++    +
Sbjct: 407 LDWACGPGNVDCSAVQPDQPCFEPDTVLSHASYAFNTYYQQSGASSIDCSFNGASVEVDK 466

Query: 140 DPSYGKCDY 141
           DPSYG C Y
Sbjct: 467 DPSYGNCLY 475

[Close]

BLAST of CmaCh18G004970 vs. Swiss-Prot
Match: E132_ARATH (Glucan endo-1,3-beta-glucosidase 2 OS=Arabidopsis thaliana GN=At1g66250 PE=1 SV=2)

HSP 1 Score: 109.8 bits (273), Expect = 3.2e-23
Identity = 55/130 (42.31%), Postives = 77/130 (59.23%), Query Frame = 1


Query: 55  SWCVAKPGVSQIDLQNALDWACGLGKADCRAIQKGGRCYQPDTLFSHASYAFNSYYQQNG 114
           ++C A+ G     LQ ALDWACG GK DC  I++G  CY+PD + +HA+YAF++YY Q G
Sbjct: 367 TYCTAREGADTKMLQAALDWACGPGKIDCSPIKQGETCYEPDNVVAHANYAFDTYYHQTG 426

Query: 115 NSDIACNFGGSATLTKRDPSYGKCDYSASRSAS--------SAPS--KWKKNGSRGCLQL 174
           N+  ACNF G A++T  DPS+G C ++ SR           +APS      +G R  L  
Sbjct: 427 NNPDACNFNGVASITTTDPSHGTCVFAGSRGNGRNGTSVNITAPSANSTTSSGIRSDLYY 486

[Close]

BLAST of CmaCh18G004970 vs. Swiss-Prot
Match: E13B_WHEAT (Glucan endo-1,3-beta-glucosidase OS=Triticum aestivum GN=GLC1 PE=2 SV=1)

HSP 1 Score: 108.2 bits (269), Expect = 9.2e-23
Identity = 46/88 (52.27%), Postives = 62/88 (70.45%), Query Frame = 1


Query: 53  GTSWCVAKPGVSQIDLQNALDWACGLGKADCRAIQKGGRCYQPDTLFSHASYAFNSYYQQ 112
           G  WCVAK G +  DLQN +++ACG    DC+ IQ GG C+ P++L +HASY  N+YYQ 
Sbjct: 374 GGKWCVAKDGANGTDLQNNINYACGF--VDCKPIQSGGACFSPNSLQAHASYVMNAYYQA 433

Query: 113 NGNSDIACNFGGSATLTKRDPSYGKCDY 141
           NG++D+AC+F G+  +T  DPSYG C Y
Sbjct: 434 NGHTDLACDFKGTGIVTSSDPSYGGCKY 459

[Close]

BLAST of CmaCh18G004970 vs. Swiss-Prot
Match: PDCB5_ARATH (PLASMODESMATA CALLOSE-BINDING PROTEIN 5 OS=Arabidopsis thaliana GN=PDCB5 PE=1 SV=2)

HSP 1 Score: 102.1 bits (253), Expect = 6.6e-21
Identity = 54/130 (41.54%), Postives = 73/130 (56.15%), Query Frame = 1


Query: 56  WCVAKPGVSQIDLQNALDWACGLGKADCRAIQKGGRCYQPDTLFSHASYAFNSYYQQNGN 115
           WCVAK       LQ A++WACG G ADC  IQ+GG C  P  +   AS+ FN+YY +NG 
Sbjct: 41  WCVAKNNAEDSSLQTAIEWACGQGGADCGPIQQGGPCNDPTDVQKMASFVFNNYYLKNGE 100

Query: 116 SDIACNFGGSATLTKRDPSYGKCDYSASRSAS-------SAPSKWKKNGSRGCLQLVGGI 175
            D ACNF  +A LT  +PS G C Y +S+ A+       ++    + + SRG  + +   
Sbjct: 101 EDEACNFNNNAALTSLNPSQGTCKYPSSKGANNGRLADDTSMGAGQADMSRGG-RPISSS 160

Query: 176 WMVMNLYFGS 179
           WMV  + FGS
Sbjct: 161 WMVTFIGFGS 169

[Close]

BLAST of CmaCh18G004970 vs. TrEMBL
Match: A0A0A0M121_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G537410 PE=4 SV=1)

HSP 1 Score: 221.9 bits (564), Expect = 6.4e-55
Identity = 117/179 (65.36%), Postives = 134/179 (74.86%), Query Frame = 1


Query: 1   MSIQIWGL-VALFLLQSFLMGEAMATAVAVEKAEASMPMTTWSPPEGNTTFLDGTSWCVA 60
           M  +IW L + L  L  F +G AMA       AEA MP+   +P EGNTTF+DGT+WCVA
Sbjct: 1   MKTKIWVLEILLLFLHYFFLGGAMA-------AEAGMPVMA-APAEGNTTFIDGTTWCVA 60

Query: 61  KPGVSQIDLQNALDWACGLGKADCRAIQKGGRCYQPDTLFSHASYAFNSYYQQNGNSDIA 120
           K GVSQIDLQNALDWACG+GKADCRAIQKGGRCY+PDTL SHAS+AFNSYYQQNGNSDIA
Sbjct: 61  KAGVSQIDLQNALDWACGMGKADCRAIQKGGRCYEPDTLLSHASFAFNSYYQQNGNSDIA 120

Query: 121 CNFGGSATLTKRDPSYGKCDYSASRSASSAPSKWKKNGSRGCLQLVGGIWMVMNLYFGS 179
           CNFGG          YGKCDYSAS S +SAPSK K + +  CL+LV  + +V+NLYFGS
Sbjct: 121 CNFGG----------YGKCDYSASSSTNSAPSKSKNSPTHICLKLVSVVSVVLNLYFGS 161

[Close]

BLAST of CmaCh18G004970 vs. TrEMBL
Match: F6HLV9_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_10s0003g04340 PE=4 SV=1)

HSP 1 Score: 212.6 bits (540), Expect = 3.9e-52
Identity = 106/155 (68.39%), Postives = 122/155 (78.71%), Query Frame = 1


Query: 2   SIQIWGL-VALFLLQSFLMGEAMATAVAVEKAEASMPMTTWSPPEGNTTFLDGTSWCVAK 61
           S   W L + L  L+S  +  +    V  EKAEA++P+TT SPPEGNTTFLDGT+WCVA 
Sbjct: 32  SSSFWFLGIELVSLKSNGLQVSTMEGVVQEKAEAALPITTLSPPEGNTTFLDGTNWCVAL 91

Query: 62  PGVSQIDLQNALDWACGLGKADCRAIQKGGRCYQPDTLFSHASYAFNSYYQQNGNSDIAC 121
           PGVSQ+DLQNALDWACGLG ADC AIQ GG C++PDTL SHASYAFNSYYQQNGNSDIAC
Sbjct: 92  PGVSQVDLQNALDWACGLGMADCGAIQAGGACFEPDTLVSHASYAFNSYYQQNGNSDIAC 151

Query: 122 NFGGSATLTKRDPSYGKCDYSASRSASSAPSKWKK 156
           NFGG+ATL+K+DPSYGKC YS S S +S+ S   K
Sbjct: 152 NFGGTATLSKKDPSYGKCSYSTSGSLNSSKSPLSK 186

[Close]

BLAST of CmaCh18G004970 vs. TrEMBL
Match: A0A067KFR2_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_09255 PE=4 SV=1)

HSP 1 Score: 211.1 bits (536), Expect = 1.1e-51
Identity = 108/176 (61.36%), Postives = 133/176 (75.57%), Query Frame = 1


Query: 1   MSIQIWGLVALFLLQSFLMGEAMATAVAVEKAEASMPMTTWSPPEGNTTFLDGTSWCVAK 60
           M   IW L  L LL+ FL+      A+  EKA+A++P+TT SPPEGNTTFL GT+WCVA 
Sbjct: 1   MRKNIWVLQCLLLLECFLV--LKIEAIVQEKADAAIPITTLSPPEGNTTFLGGTTWCVAL 60

Query: 61  PGVSQIDLQNALDWACGLGKADCRAIQKGGRCYQPDTLFSHASYAFNSYYQQNGNSDIAC 120
            GVSQIDLQNALDWACGLG ADCRAIQ+GG C++P+TL SHASYAFN+YYQQNGNSDIAC
Sbjct: 61  AGVSQIDLQNALDWACGLGMADCRAIQEGGACFEPNTLLSHASYAFNNYYQQNGNSDIAC 120

Query: 121 NFGGSATLTKRDPSYGKCDYSAS--RSASSAPSKWKKNGSRGCLQLVGGIWMVMNL 175
           NFGG+ATLTK +PSYGKC+Y+A+   S  S+ + W K+        + GI +++ L
Sbjct: 121 NFGGTATLTKSNPSYGKCNYAAAGLGSLHSSVASWSKHSPNMVWWKLVGILLLLYL 174

[Close]

BLAST of CmaCh18G004970 vs. TrEMBL
Match: A0A0S3QYP5_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.01G095300 PE=4 SV=1)

HSP 1 Score: 208.8 bits (530), Expect = 5.6e-51
Identity = 104/158 (65.82%), Postives = 127/158 (80.38%), Query Frame = 1


Query: 1   MSIQIWGLVALFLLQSFLMGEAMATAVAVE-KAEASMPMTTWSPPEGNTTFLDGTSWCVA 60
           M  ++W  + L  ++ +L   AMA  + V+ KA+A++P+TT SPPEGNTTF+DGT+WC+A
Sbjct: 1   MKNKMWLYLFLIFIECYL---AMAREIVVQQKADAAIPVTTMSPPEGNTTFIDGTTWCMA 60

Query: 61  KPGVSQIDLQNALDWACGLGKADCRAIQKGGRCYQPDTLFSHASYAFNSYYQQNGNSDIA 120
           +PG SQ DLQNALDWACGLG A+C+AIQ+GG C++PDTL SHASYAFNSYYQ NGNSDIA
Sbjct: 61  RPGASQNDLQNALDWACGLGMANCKAIQQGGPCFEPDTLVSHASYAFNSYYQTNGNSDIA 120

Query: 121 CNFGGSATLTKRDPSYGKCDYSASRS-ASSAPSKWKKN 157
           CNFGG+A LTKRDPSYGKC YS S S  +SAP   KKN
Sbjct: 121 CNFGGTAALTKRDPSYGKCVYSTSGSLVASAPPLLKKN 155

[Close]

BLAST of CmaCh18G004970 vs. TrEMBL
Match: A0A0L9TDU5_PHAAN (Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan564s000300 PE=4 SV=1)

HSP 1 Score: 207.2 bits (526), Expect = 1.6e-50
Identity = 97/131 (74.05%), Postives = 113/131 (86.26%), Query Frame = 1


Query: 27  VAVEKAEASMPMTTWSPPEGNTTFLDGTSWCVAKPGVSQIDLQNALDWACGLGKADCRAI 86
           V  +KA+A++P+TT SPPEGNTTF+DGT+WC+A+PG SQ DLQNALDWACGLG A+C+AI
Sbjct: 6   VVQQKADAAIPVTTMSPPEGNTTFIDGTTWCMARPGASQNDLQNALDWACGLGMANCKAI 65

Query: 87  QKGGRCYQPDTLFSHASYAFNSYYQQNGNSDIACNFGGSATLTKRDPSYGKCDYSASRS- 146
           Q+GG C++PDTL SHASYAFNSYYQ NGNSDIACNFGG+A LTKRDPSYGKC YS S S 
Sbjct: 66  QQGGPCFEPDTLVSHASYAFNSYYQTNGNSDIACNFGGTAALTKRDPSYGKCVYSTSGSL 125

Query: 147 ASSAPSKWKKN 157
            +SAP   KKN
Sbjct: 126 VASAPPLLKKN 136

[Close]

BLAST of CmaCh18G004970 vs. TAIR10
Match: AT4G05430.1 (AT4G05430.1 Carbohydrate-binding X8 domain superfamily protein)

HSP 1 Score: 164.5 bits (415), Expect = 6.1e-41
Identity = 72/130 (55.38%), Postives = 98/130 (75.38%), Query Frame = 1


Query: 44  PEGNTTFLDGTSWCVAKPGVSQIDLQNALDWACGLGKADCRAIQKGGRCYQPDTLFSHAS 103
           P+GNTTFL+GT+WCVA+PG +Q +LQ ALDWACG+G+ DC  I++ G CY+PDT+ SHAS
Sbjct: 11  PQGNTTFLEGTTWCVARPGATQAELQRALDWACGIGRVDCSVIERHGDCYEPDTIVSHAS 70

Query: 104 YAFNSYYQQNGNSDIACNFGGSATLTKRDPSYGKCDYSASRSASSAPSKWKKNGSRGCLQ 163
           +AFN+YYQ NGN+ IAC FGG+AT TK +PSYGKC Y AS+S  S      +  +R  L 
Sbjct: 71  FAFNAYYQTNGNNRIACYFGGTATFTKINPSYGKCSYDASKSEVSTARSLSEYKARWLLL 130

Query: 164 LVGGIWMVMN 174
           +  G++ +++
Sbjct: 131 MYIGVFSLIS 140

[Close]

BLAST of CmaCh18G004970 vs. TAIR10
Match: AT1G09460.1 (AT1G09460.1 Carbohydrate-binding X8 domain superfamily protein)

HSP 1 Score: 117.5 bits (293), Expect = 8.6e-27
Identity = 59/114 (51.75%), Postives = 78/114 (68.42%), Query Frame = 1


Query: 36  MPMTTWSPPE-GNTTFLDGTSWCVAKPGVSQIDLQNALDWACGLGKADCRAIQKGGRCYQ 95
           +P+   +PP   N+  + G SWCVAKPG SQ+ LQ ALD+ACG+  ADC  +Q+GG CY 
Sbjct: 116 VPVPVVAPPVVSNSPSVSGQSWCVAKPGASQVSLQQALDYACGI--ADCSQLQQGGNCYS 175

Query: 96  PDTLFSHASYAFNSYYQQNGNSDIACNFGGSATLTKRDPSYGKCDYSASRSASS 149
           P +L SHAS+AFNSYYQ+N  S  +C+FGG+A+L   +PS G C Y    S S+
Sbjct: 176 PISLQSHASFAFNSYYQKN-PSPQSCDFGGAASLVNTNPSTGSCIYQTGSSTST 226

[Close]

BLAST of CmaCh18G004970 vs. TAIR10
Match: AT5G56590.1 (AT5G56590.1 O-Glycosyl hydrolases family 17 protein)

HSP 1 Score: 116.7 bits (291), Expect = 1.5e-26
Identity = 58/142 (40.85%), Postives = 82/142 (57.75%), Query Frame = 1


Query: 42  SPPEGNTTFLDGTSWCVAKPGVSQIDLQNALDWACGLGKADCRAIQKGGRCYQPDTLFSH 101
           S   G  +     SWC+A    S+ DL+ ALDWACG G  DC AIQ    C+QPDTL SH
Sbjct: 355 SNSSGTNSSGSSNSWCIASSKASERDLKGALDWACGPGNVDCTAIQPSQPCFQPDTLVSH 414

Query: 102 ASYAFNSYYQQNGNSDIACNFGGSATLTKRDPSYGKCDY-------SASRSASSAPSKWK 161
           AS+ FNSY+QQN  +D+AC+FGG+     +DPSY KC Y       + + +A++  S   
Sbjct: 415 ASFVFNSYFQQNRATDVACSFGGAGVKVNKDPSYDKCIYITAGGNKTKATNATALTSSAS 474

Query: 162 KNGSRGCLQLVGGIWMVMNLYF 177
                  LQ +  + ++++L+F
Sbjct: 475 TPRGNELLQWILKLCLMISLFF 496

[Close]

BLAST of CmaCh18G004970 vs. TAIR10
Match: AT1G29380.1 (AT1G29380.1 Carbohydrate-binding X8 domain superfamily protein)

HSP 1 Score: 111.3 bits (277), Expect = 6.1e-25
Identity = 54/99 (54.55%), Postives = 70/99 (70.71%), Query Frame = 1


Query: 56  WCVAKPGVSQIDLQNALDWACGLGKADCRAIQKGGRCYQPDTLFSHASYAFNSYYQQNGN 115
           WC+AK   S   LQ ALD+ACG G ADC  IQ+G  CY+P+T+  HAS+AFNSYYQ++  
Sbjct: 148 WCIAKANASPTSLQVALDYACGYGGADCGQIQQGAACYEPNTIRDHASFAFNSYYQKHPG 207

Query: 116 SDIACNFGGSATLTKRDPSYGKCDYSASRS--ASSAPSK 153
           SD +CNFGG+A LT  DPS G C +S+S    ++S PS+
Sbjct: 208 SD-SCNFGGAAQLTSTDPSKGSCHFSSSSGTVSTSPPSQ 245

[Close]

BLAST of CmaCh18G004970 vs. TAIR10
Match: AT4G29360.1 (AT4G29360.1 O-Glycosyl hydrolases family 17 protein)

HSP 1 Score: 110.9 bits (276), Expect = 8.0e-25
Identity = 56/129 (43.41%), Postives = 71/129 (55.04%), Query Frame = 1


Query: 20  GEAMATAVAVEKAEASMPMTTWSPP-EGNTTFLDG-------TSWCVAKPGVSQIDLQNA 79
           GE             + P  + SP   GN+T   G         WC+A    S  +LQ A
Sbjct: 347 GENTTPVSPTNSTTGTSPSPSSSPIINGNSTVTIGGGGGGGTKKWCIASSQASVTELQTA 406

Query: 80  LDWACGLGKADCRAIQKGGRCYQPDTLFSHASYAFNSYYQQNGNSDIACNFGGSATLTKR 139
           LDWACG G  DC A+Q    C++PDT+ SHASYAFN+YYQQ+G S I C+F G++    +
Sbjct: 407 LDWACGPGNVDCSAVQPDQPCFEPDTVLSHASYAFNTYYQQSGASSIDCSFNGASVEVDK 466

Query: 140 DPSYGKCDY 141
           DPSYG C Y
Sbjct: 467 DPSYGNCLY 475

[Close]

BLAST of CmaCh18G004970 vs. NCBI nr
Match: gi|659068513|ref|XP_008444815.1| (PREDICTED: glucan endo-1,3-beta-glucosidase 13 [Cucumis melo])

HSP 1 Score: 257.3 bits (656), Expect = 2.0e-65
Identity = 128/178 (71.91%), Postives = 145/178 (81.46%), Query Frame = 1


Query: 1   MSIQIWGLVALFLLQSFLMGEAMATAVAVEKAEASMPMTTWSPPEGNTTFLDGTSWCVAK 60
           M  +IW L  L  L  F +G AMA       AEA MP+   +P EGNTTF+DGT+WCVAK
Sbjct: 1   MKTKIWVLEILLFLHYFFLGGAMA-------AEAGMPVMA-APVEGNTTFIDGTTWCVAK 60

Query: 61  PGVSQIDLQNALDWACGLGKADCRAIQKGGRCYQPDTLFSHASYAFNSYYQQNGNSDIAC 120
           PGVSQIDLQNALDWACG+GKADCRAIQKGGRCY+PDTL SHASYAFNSYYQQNGNSDIAC
Sbjct: 61  PGVSQIDLQNALDWACGMGKADCRAIQKGGRCYEPDTLLSHASYAFNSYYQQNGNSDIAC 120

Query: 121 NFGGSATLTKRDPSYGKCDYSASRSASSAPSKWKKNGSRGCLQLVGGIWMVMNLYFGS 179
           NFGG ATLTK+DPSYGKCDYSAS S +SAPSK K + S  CL+L+ G+++V+NLYFGS
Sbjct: 121 NFGGCATLTKKDPSYGKCDYSASSSTNSAPSKSKNSPSHICLKLLSGVFVVLNLYFGS 170

[Close]

BLAST of CmaCh18G004970 vs. NCBI nr
Match: gi|449435510|ref|XP_004135538.1| (PREDICTED: major pollen allergen Ole e 10 [Cucumis sativus])

HSP 1 Score: 245.4 bits (625), Expect = 7.7e-62
Identity = 125/179 (69.83%), Postives = 143/179 (79.89%), Query Frame = 1


Query: 1   MSIQIWGL-VALFLLQSFLMGEAMATAVAVEKAEASMPMTTWSPPEGNTTFLDGTSWCVA 60
           M  +IW L + L  L  F +G AMA       AEA MP+   +P EGNTTF+DGT+WCVA
Sbjct: 1   MKTKIWVLEILLLFLHYFFLGGAMA-------AEAGMPVMA-APAEGNTTFIDGTTWCVA 60

Query: 61  KPGVSQIDLQNALDWACGLGKADCRAIQKGGRCYQPDTLFSHASYAFNSYYQQNGNSDIA 120
           K GVSQIDLQNALDWACG+GKADCRAIQKGGRCY+PDTL SHAS+AFNSYYQQNGNSDIA
Sbjct: 61  KAGVSQIDLQNALDWACGMGKADCRAIQKGGRCYEPDTLLSHASFAFNSYYQQNGNSDIA 120

Query: 121 CNFGGSATLTKRDPSYGKCDYSASRSASSAPSKWKKNGSRGCLQLVGGIWMVMNLYFGS 179
           CNFGG ATLTK+DPSYGKCDYSAS S +SAPSK K + +  CL+LV  + +V+NLYFGS
Sbjct: 121 CNFGGCATLTKKDPSYGKCDYSASSSTNSAPSKSKNSPTHICLKLVSVVSVVLNLYFGS 171

[Close]

BLAST of CmaCh18G004970 vs. NCBI nr
Match: gi|700210795|gb|KGN65891.1| (hypothetical protein Csa_1G537410 [Cucumis sativus])

HSP 1 Score: 221.9 bits (564), Expect = 9.2e-55
Identity = 117/179 (65.36%), Postives = 134/179 (74.86%), Query Frame = 1


Query: 1   MSIQIWGL-VALFLLQSFLMGEAMATAVAVEKAEASMPMTTWSPPEGNTTFLDGTSWCVA 60
           M  +IW L + L  L  F +G AMA       AEA MP+   +P EGNTTF+DGT+WCVA
Sbjct: 1   MKTKIWVLEILLLFLHYFFLGGAMA-------AEAGMPVMA-APAEGNTTFIDGTTWCVA 60

Query: 61  KPGVSQIDLQNALDWACGLGKADCRAIQKGGRCYQPDTLFSHASYAFNSYYQQNGNSDIA 120
           K GVSQIDLQNALDWACG+GKADCRAIQKGGRCY+PDTL SHAS+AFNSYYQQNGNSDIA
Sbjct: 61  KAGVSQIDLQNALDWACGMGKADCRAIQKGGRCYEPDTLLSHASFAFNSYYQQNGNSDIA 120

Query: 121 CNFGGSATLTKRDPSYGKCDYSASRSASSAPSKWKKNGSRGCLQLVGGIWMVMNLYFGS 179
           CNFGG          YGKCDYSAS S +SAPSK K + +  CL+LV  + +V+NLYFGS
Sbjct: 121 CNFGG----------YGKCDYSASSSTNSAPSKSKNSPTHICLKLVSVVSVVLNLYFGS 161

[Close]

BLAST of CmaCh18G004970 vs. NCBI nr
Match: gi|297740791|emb|CBI30973.3| (unnamed protein product [Vitis vinifera])

HSP 1 Score: 217.6 bits (553), Expect = 1.7e-53
Identity = 107/155 (69.03%), Postives = 125/155 (80.65%), Query Frame = 1


Query: 1   MSIQIWGLVALFLLQSFLMGEAMATAVAVEKAEASMPMTTWSPPEGNTTFLDGTSWCVAK 60
           M  +IW   +L LL+ +L+  +    V  EKAEA++P+TT SPPEGNTTFLDGT+WCVA 
Sbjct: 549 MRKKIWIFQSLLLLECYLV--STMEGVVQEKAEAALPITTLSPPEGNTTFLDGTNWCVAL 608

Query: 61  PGVSQIDLQNALDWACGLGKADCRAIQKGGRCYQPDTLFSHASYAFNSYYQQNGNSDIAC 120
           PGVSQ+DLQNALDWACGLG ADC AIQ GG C++PDTL SHASYAFNSYYQQNGNSDIAC
Sbjct: 609 PGVSQVDLQNALDWACGLGMADCGAIQAGGACFEPDTLVSHASYAFNSYYQQNGNSDIAC 668

Query: 121 NFGGSATLTKRDPSYGKCDYSASRSASSAPSKWKK 156
           NFGG+ATL+K+DPSYGKC YS S S +S+ S   K
Sbjct: 669 NFGGTATLSKKDPSYGKCSYSTSGSLNSSKSPLSK 701

[Close]

BLAST of CmaCh18G004970 vs. NCBI nr
Match: gi|359483921|ref|XP_002274294.2| (PREDICTED: glucan endo-1,3-beta-glucosidase 13 [Vitis vinifera])

HSP 1 Score: 217.6 bits (553), Expect = 1.7e-53
Identity = 107/155 (69.03%), Postives = 125/155 (80.65%), Query Frame = 1


Query: 1   MSIQIWGLVALFLLQSFLMGEAMATAVAVEKAEASMPMTTWSPPEGNTTFLDGTSWCVAK 60
           M  +IW   +L LL+ +L+  +    V  EKAEA++P+TT SPPEGNTTFLDGT+WCVA 
Sbjct: 4   MRKKIWIFQSLLLLECYLV--STMEGVVQEKAEAALPITTLSPPEGNTTFLDGTNWCVAL 63

Query: 61  PGVSQIDLQNALDWACGLGKADCRAIQKGGRCYQPDTLFSHASYAFNSYYQQNGNSDIAC 120
           PGVSQ+DLQNALDWACGLG ADC AIQ GG C++PDTL SHASYAFNSYYQQNGNSDIAC
Sbjct: 64  PGVSQVDLQNALDWACGLGMADCGAIQAGGACFEPDTLVSHASYAFNSYYQQNGNSDIAC 123

Query: 121 NFGGSATLTKRDPSYGKCDYSASRSASSAPSKWKK 156
           NFGG+ATL+K+DPSYGKC YS S S +S+ S   K
Sbjct: 124 NFGGTATLSKKDPSYGKCSYSTSGSLNSSKSPLSK 156

The following BLAST results are available for this feature:

BLAST of CmaCh18G004970 vs. Swiss-Prot


Match Name	E-value	Identity	Description
E1313_ARATH	2.6e-25	40.85	Glucan endo-1,3-beta-glucosidase 13 OS=Arabidopsis thaliana GN=At5g56590 PE=1 SV...	[more]
E1312_ARATH	1.4e-23	43.41	Glucan endo-1,3-beta-glucosidase 12 OS=Arabidopsis thaliana GN=At4g29360 PE=1 SV...	[more]
E132_ARATH	3.2e-23	42.31	Glucan endo-1,3-beta-glucosidase 2 OS=Arabidopsis thaliana GN=At1g66250 PE=1 SV=...	[more]
E13B_WHEAT	9.2e-23	52.27	Glucan endo-1,3-beta-glucosidase OS=Triticum aestivum GN=GLC1 PE=2 SV=1	[more]
PDCB5_ARATH	6.6e-21	41.54	PLASMODESMATA CALLOSE-BINDING PROTEIN 5 OS=Arabidopsis thaliana GN=PDCB5 PE=1 SV...	[more]

BLAST of CmaCh18G004970 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0M121_CUCSA	6.4e-55	65.36	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G537410 PE=4 SV=1	[more]
F6HLV9_VITVI	3.9e-52	68.39	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_10s0003g04340 PE=4 SV=...	[more]
A0A067KFR2_JATCU	1.1e-51	61.36	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_09255 PE=4 SV=1	[more]
A0A0S3QYP5_PHAAN	5.6e-51	65.82	Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.01G095300 PE=...	[more]
A0A0L9TDU5_PHAAN	1.6e-50	74.05	Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan564s000300 PE=4 SV=1	[more]

BLAST of CmaCh18G004970 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G05430.1	6.1e-41	55.38	Carbohydrate-binding X8 domain superfamily protein	[more]
AT1G09460.1	8.6e-27	51.75	Carbohydrate-binding X8 domain superfamily protein	[more]
AT5G56590.1	1.5e-26	40.85	O-Glycosyl hydrolases family 17 protein	[more]
AT1G29380.1	6.1e-25	54.55	Carbohydrate-binding X8 domain superfamily protein	[more]
AT4G29360.1	8.0e-25	43.41	O-Glycosyl hydrolases family 17 protein	[more]

BLAST of CmaCh18G004970 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659068513\|ref\|XP_008444815.1\|	2.0e-65	71.91	PREDICTED: glucan endo-1,3-beta-glucosidase 13 [Cucumis melo]	[more]
gi\|449435510\|ref\|XP_004135538.1\|	7.7e-62	69.83	PREDICTED: major pollen allergen Ole e 10 [Cucumis sativus]	[more]
gi\|700210795\|gb\|KGN65891.1\|	9.2e-55	65.36	hypothetical protein Csa_1G537410 [Cucumis sativus]	[more]
gi\|297740791\|emb\|CBI30973.3\|	1.7e-53	69.03	unnamed protein product [Vitis vinifera]	[more]
gi\|359483921\|ref\|XP_002274294.2\|	1.7e-53	69.03	PREDICTED: glucan endo-1,3-beta-glucosidase 13 [Vitis vinifera]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR012946	X8

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0018106	peptidyl-histidine phosphorylation
biological_process	GO:0048446	petal morphogenesis
biological_process	GO:0008150	biological_process
cellular_component	GO:0009365	protein histidine kinase complex
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0004673	protein histidine kinase activity
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh18G004970.1	CmaCh18G004970.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR012946	X8 domain	PFAM	PF07983	X8	coord: 55..127 score: 8.6
IPR012946	X8 domain	SMART	SM00768	X8_cls	coord: 55..140 score: 4.1
None	No IPR available	PANTHER	PTHR32227	FAMILY NOT NAMED	coord: 18..148 score: 2.1
None	No IPR available	PANTHER	PTHR32227:SF51	CARBOHYDRATE-BINDING X8 DOMAIN-CONTAINING PROTEIN	coord: 18..148 score: 2.1

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh18G004970	Cucsa.166770	Cucumber (Gy14) v1	cgycmaB0476
CmaCh18G004970	Cla019538	Watermelon (97103) v1	cmawmB370
CmaCh18G004970	Csa1G537410	Cucumber (Chinese Long) v2	cmacuB392
CmaCh18G004970	MELO3C002782	Melon (DHL92) v3.5.1	cmameB364
CmaCh18G004970	ClCG03G006410	Watermelon (Charleston Gray)	cmawcgB357
CmaCh18G004970	CSPI01G24680	Wild cucumber (PI 183967)	cmacpiB396
CmaCh18G004970	CmoCh18G004740	Cucurbita moschata (Rifu)	cmacmoB407
CmaCh18G004970	CmoCh13G005320	Cucurbita moschata (Rifu)	cmacmoB398
CmaCh18G004970	Lsi02G009290	Bottle gourd (USVL1VR-Ls)	cmalsiB369
CmaCh18G004970	Cp4.1LG09g07400	Cucurbita pepo (Zucchini)	cmacpeB415
CmaCh18G004970	Cp4.1LG20g05460	Cucurbita pepo (Zucchini)	cmacpeB438
CmaCh18G004970	MELO3C002782.2	Melon (DHL92) v3.6.1	cmamedB423
CmaCh18G004970	CsaV3_1G036990	Cucumber (Chinese Long) v3	cmacucB0467
CmaCh18G004970	Cla97C03G057680	Watermelon (97103) v2	cmawmbB416
CmaCh18G004970	Bhi08G000987	Wax gourd	cmawgoB0528
CmaCh18G004970	CsGy1G024140	Cucumber (Gy14) v2	cgybcmaB087
CmaCh18G004970	Carg22564	Silver-seed gourd	carcmaB0586
CmaCh18G004970	Carg25463	Silver-seed gourd	carcmaB0286

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmaCh18G004970	CmaCh13G005030	Cucurbita maxima (Rimu)	cmacmaB216

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh18G004970	Silver-seed gourd	carcmaB0412
CmaCh18G004970	Cucumber (Chinese Long) v3	cmacucB0480
CmaCh18G004970	Wax gourd	cmawgoB0532
CmaCh18G004970	Cucurbita maxima (Rimu)	cmacmaB397
CmaCh18G004970	Cucurbita maxima (Rimu)	cmacmaB414
CmaCh18G004970	Cucurbita moschata (Rifu)	cmacmoB417
CmaCh18G004970	Cucurbita moschata (Rifu)	cmacmoB429
CmaCh18G004970	Wild cucumber (PI 183967)	cmacpiB426
CmaCh18G004970	Watermelon (Charleston Gray)	cmawcgB345
CmaCh18G004970	Cucurbita pepo (Zucchini)	cmacpeB417
CmaCh18G004970	Cucurbita pepo (Zucchini)	cmacpeB437