CmaCh18G003260 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh18G003260
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	Thioredoxin h
Location	Cma_Chr18 : 1747321 .. 1749105 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGGGGCAAGAGCAGTGGCGACAGATTAGGGTTGTGAAGATCGAATCCATGGAATCGTGGAATTCCTTTGTGACTAAAGCTGCTCAGCAAGACTCTCTTGTATGTTCCCTTCTTCAACTTCATTTCCTTTGTCTCGATTTTTGAATGGTTTCTTAATGTTGAGATTTGATCTATTTTGATGGGAGATTGGTTTGTGAGTTCTTGGTTTTCGTTTATCTCTGTGGTTTTTGTAGATTGTTGTGCACTTCACTGCTTCTTGGTGCATGCCTTCTGTTGCTATGAATCCATTCTTTGAAGAACTGGCTTTTAATTACCCAGATGCTCTGTTTCTCACTGTTGATGTTGATGAGGTTAAGGTAATAAGTCTAATTCCAATGTCCAAAATCATGATAAATGTGGTAGCAGTTTTTGAAGAGTATGGTACATTTTGCTGAAGAACAGATTATGTCATTGCTTCTATCTAAAAACTTATATCAGACTTCTTCATTCCATCAAGTTTCTTCAAGTCAATGTGTCATAAGTTCGTTGTTTTGGTTCTATAATTCAAATGATTATGGTTTCAAAATGAGTAATCAGAAACACATTTGGTGTAGATTGAGGTTGGAAGTTCATTATCTTTGAAAACTTCCAACTAGCTCATAACCCACATTCAGCTTCTTTCTTCTTCATCAAAGCCATAAAAGCACTCATAAATGGCAAATATCAGATCAGTGATTCATCCTTTATCAAACAATCATGAACTCATAAAAGGGCAGTATATTTGTGCAAAGTCGGAGAAAAATTCGATCCAAACTTGGGAAAGATACCACATGTTATGTGATATCCCACATCGGTTGGGAGGAGAACGAAACATTCTTTATAAGGGGTGGAAACTCTCCCTAATAGATGCGTTTTAATACCAATACCTTGAGGGGGCTGGACACTGGGAGGTGTGCTAGCGAGGACGCTGAGCCTCTAAGGTGGGTAGACACCAGGCGGTGTGCCAGTGAGGATGCTGAGCCCTGAAGGGGGTGGACACCAGACGGTGTGCTGGTAAGGATGTTGGGCCTTGAATGAGGGTGGATTATGAGATTCCACCTCGATTGAGGAGGGGAACGACATCGATTGAAGAGGAGAACGAGTGCCAGTGAGGACGAGAAGGGGGGTGGATTGTGAGATCCCACATCGGTTGGGAAGGAGAACGAAGAATTCTTTATAAGAGTGTGGAAACCTCTCCCTAGTAGACGTGTTTTAAAACCTTAAGTCTGAAAGAGAAAGTCCAAAGAGGGACAATATGTGTCAGCGGTTGGCTTGGGCTGTTACCTTTAGGGATGACTTTCACAGTGACTTGCTATTATCCCTCATGTTCCCCTTTCTTGACTGTCCTTCTACATGTGTGGCCAAAAAAGCCCCTTCCCAACCGCTTCTCCAAGCTAACTTGTTCCTAAATGCTTCGGAAACCCAAAGCTCTTGTCAAAACCAGGCCATGGAACAGATGCCTCATACGGTTTCACTGTGTTGTATCGTCTCGCTAGTTGAAACCGATGCCTCATAAATGGAAAATATCAGATGGAACCGTTCTTTATCGTCCCCTGATTCACATCCTGAGAGAGATAACAAAATAACTTCTTTGTGATTTTCTTGTTTTCATGATAGGAAGTGGCTGCTAAAATGGAGATAAAGGCAATGCCAACATTCTTGCTGATGAAGAATGGTACTCAAATTGGGAAGCTCGTGGGTGCAAATCCAGAAGAGGTAAGGAAAATGATAGACGCAAATGTTGAGACCATACATGTTGCATAA

mRNA sequence

ATGGAGGGGCAAGAGCAGTGGCGACAGATTAGGGTTGTGAAGATCGAATCCATGGAATCGTGGAATTCCTTTGTGACTAAAGCTGCTCAGCAAGACTCTCTTATTGTTGTGCACTTCACTGCTTCTTGGTGCATGCCTTCTGTTGCTATGAATCCATTCTTTGAAGAACTGGCTTTTAATTACCCAGATGCTCTGTTTCTCACTGTTGATGTTGATGAGGTTAAGGAAGTGGCTGCTAAAATGGAGATAAAGGCAATGCCAACATTCTTGCTGATGAAGAATGGTACTCAAATTGGGAAGCTCGTGGGTGCAAATCCAGAAGAGGTAAGGAAAATGATAGACGCAAATGTTGAGACCATACATGTTGCATAA

Coding sequence (CDS)

ATGGAGGGGCAAGAGCAGTGGCGACAGATTAGGGTTGTGAAGATCGAATCCATGGAATCGTGGAATTCCTTTGTGACTAAAGCTGCTCAGCAAGACTCTCTTATTGTTGTGCACTTCACTGCTTCTTGGTGCATGCCTTCTGTTGCTATGAATCCATTCTTTGAAGAACTGGCTTTTAATTACCCAGATGCTCTGTTTCTCACTGTTGATGTTGATGAGGTTAAGGAAGTGGCTGCTAAAATGGAGATAAAGGCAATGCCAACATTCTTGCTGATGAAGAATGGTACTCAAATTGGGAAGCTCGTGGGTGCAAATCCAGAAGAGGTAAGGAAAATGATAGACGCAAATGTTGAGACCATACATGTTGCATAA

Protein sequence

MEGQEQWRQIRVVKIESMESWNSFVTKAAQQDSLIVVHFTASWCMPSVAMNPFFEELAFNYPDALFLTVDVDEVKEVAAKMEIKAMPTFLLMKNGTQIGKLVGANPEEVRKMIDANVETIHVA

Homology

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BLAST of CmaCh18G003260 vs. Swiss-Prot
Match: CXXS1_ARATH (Thioredoxin-like protein CXXS1 OS=Arabidopsis thaliana GN=CXXS1 PE=2 SV=2)

HSP 1 Score: 152.9 bits (385), Expect = 2.3e-36
Identity = 73/116 (62.93%), Postives = 94/116 (81.03%), Query Frame = 1


Query: 11  RVVKIESMESWNSFVTKAAQQDSLIVVHFTASWCMPSVAMNPFFEELAFNYPDALFLTVD 70
           RVVKI+S ESWN +V++A  Q+  IV HFTA WC+PSV MN FFEELAFNY DALFL VD
Sbjct: 3   RVVKIDSAESWNFYVSQAKNQNCPIVAHFTALWCIPSVFMNSFFEELAFNYKDALFLIVD 62

Query: 71  VDEVKEVAAKMEIKAMPTFLLMKNGTQIGKLVGANPEEVRKMIDANVET---IHVA 124
           VDEVKEVA+++E+KAMPTFL +K+G  + KLVGANP+E++K +D  V++   +H+A
Sbjct: 63  VDEVKEVASQLEVKAMPTFLFLKDGNAMDKLVGANPDEIKKRVDGFVQSSRVVHIA 118

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BLAST of CmaCh18G003260 vs. Swiss-Prot
Match: CXXS1_ORYSJ (Thioredoxin-like protein CXXS1 OS=Oryza sativa subsp. japonica GN=Os04g0629500 PE=2 SV=1)

HSP 1 Score: 125.6 bits (314), Expect = 3.9e-28
Identity = 58/112 (51.79%), Postives = 85/112 (75.89%), Query Frame = 1


Query: 11  RVVKIESMESWNSFVTKAAQQDSLIVVHFTASWCMPSVAMNPFFEELAFNYPDALFLTVD 70
           +VVK+E  ESW+ FV +A+ +   +V HF ASWC+ S++MN  FEELA  +P+ LFL VD
Sbjct: 13  KVVKVEKEESWDLFVNQASNEGHPVVAHFGASWCVTSLSMNYKFEELAQTHPEILFLYVD 72

Query: 71  VDEVKEVAAKMEIKAMPTFLLMKNGTQIGKLVGANPEEVRKMIDANVETIHV 123
           VD+V+ V++K+ +KAMPTF L+K+   + K+VGANP+EV+KM+DA+ E+  V
Sbjct: 73  VDDVQSVSSKLGVKAMPTFFLIKDKEVVNKIVGANPDEVKKMVDASAESFGV 124

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BLAST of CmaCh18G003260 vs. Swiss-Prot
Match: TRXH1_ARATH (Thioredoxin H1 OS=Arabidopsis thaliana GN=TRX1 PE=1 SV=1)

HSP 1 Score: 96.7 bits (239), Expect = 1.9e-19
Identity = 46/103 (44.66%), Postives = 68/103 (66.02%), Query Frame = 1


Query: 11  RVVKIESMESWNSFVTKAAQQDSLIVVHFTASWCMPSVAMNPFFEELAFNYPDALFLTVD 70
           +V+   ++E+WN  + KA +  +L+VV FTASWC P   + PFF +LA   P+ LFL VD
Sbjct: 7   QVIACHTVETWNEQLQKANESKTLVVVDFTASWCGPCRFIAPFFADLAKKLPNVLFLKVD 66

Query: 71  VDEVKEVAAKMEIKAMPTFLLMKNGTQIGKLVGANPEEVRKMI 114
            DE+K VA+   I+AMPTF+ +K G  + K+VGA  +E++  I
Sbjct: 67  TDELKSVASDWAIQAMPTFMFLKEGKILDKVVGAKKDELQSTI 109

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BLAST of CmaCh18G003260 vs. Swiss-Prot
Match: TRXH9_ARATH (Thioredoxin H9 OS=Arabidopsis thaliana GN=TRX9 PE=1 SV=1)

HSP 1 Score: 96.7 bits (239), Expect = 1.9e-19
Identity = 43/106 (40.57%), Postives = 71/106 (66.98%), Query Frame = 1


Query: 15  IESMESWNSFVTKAAQQDSLIVVHFTASWCMPSVAMNPFFEELAFNYPDALFLTVDVDEV 74
           I + ESW+  + +A +   ++V +F+A+WC P   + PFF EL+  +   +FL VDVDE+
Sbjct: 28  ITTKESWDDKLAEADRDGKIVVANFSATWCGPCKIVAPFFIELSEKHSSLMFLLVDVDEL 87

Query: 75  KEVAAKMEIKAMPTFLLMKNGTQIGKLVGANPEEVRKMIDANVETI 121
            + ++  +IKA PTF  +KNG QIGKLVGAN  E++K + + ++++
Sbjct: 88  SDFSSSWDIKATPTFFFLKNGQQIGKLVGANKPELQKKVTSIIDSV 133

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BLAST of CmaCh18G003260 vs. Swiss-Prot
Match: TRXH_POPJC (Thioredoxin H-type OS=Populus jackii PE=1 SV=1)

HSP 1 Score: 95.5 bits (236), Expect = 4.3e-19
Identity = 41/106 (38.68%), Postives = 71/106 (66.98%), Query Frame = 1


Query: 15  IESMESWNSFVTKAAQQDSLIVVHFTASWCMPSVAMNPFFEELAFNYPDALFLTVDVDEV 74
           I + E W+  +++A++   +++ +F+A WC P   + P++ EL+ NYP  +FL +DVDE+
Sbjct: 29  ITTKERWDQKLSEASRDGKIVLANFSARWCGPCKQIAPYYIELSENYPSLMFLVIDVDEL 88

Query: 75  KEVAAKMEIKAMPTFLLMKNGTQIGKLVGANPEEVRKMIDANVETI 121
            + +A  EIKA PTF  +++G Q+ KLVGAN  E+ K I A ++++
Sbjct: 89  SDFSASWEIKATPTFFFLRDGQQVDKLVGANKPELHKKITAILDSL 134

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BLAST of CmaCh18G003260 vs. TrEMBL
Match: A0A0A0LUX0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G065970 PE=4 SV=1)

HSP 1 Score: 204.9 bits (520), Expect = 5.6e-50
Identity = 101/123 (82.11%), Postives = 109/123 (88.62%), Query Frame = 1


Query: 1   MEGQEQWRQIRVVKIESMESWNSFVTKAAQQDSLIVVHFTASWCMPSVAMNPFFEELAFN 60
           MEGQ+QW++ RVVKIESMESWN  +TKA QQDSLIVVHFTASWCMPSVAMNPFFEELA  
Sbjct: 1   MEGQDQWQRTRVVKIESMESWNFNLTKAIQQDSLIVVHFTASWCMPSVAMNPFFEELALT 60

Query: 61  YPDALFLTVDVDEVKEVAAKMEIKAMPTFLLMKNGTQIGKLVGANPEEVRKMIDANVETI 120
           YPD LFLTVDVDEVKEVAAK+EIKAMPTFL+MKNG  I KLVGANPEE+RK I A  ET+
Sbjct: 61  YPDVLFLTVDVDEVKEVAAKLEIKAMPTFLVMKNGNLIDKLVGANPEEIRKRIGAYTETV 120

Query: 121 HVA 124
           HVA
Sbjct: 121 HVA 123

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BLAST of CmaCh18G003260 vs. TrEMBL
Match: A0A067JAI5_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_21292 PE=4 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 6.8e-40
Identity = 82/122 (67.21%), Postives = 100/122 (81.97%), Query Frame = 1


Query: 1   MEGQEQWRQIRVVKIESMESWNSFVTKAAQQDSLIVVHFTASWCMPSVAMNPFFEELAFN 60
           ME QEQ  + RVVK++S++SW  +VT+A  Q   IVVHFTASWC+PSVAMNPFFEELA  
Sbjct: 1   MENQEQQTKSRVVKVDSVQSWEFYVTQANNQGCPIVVHFTASWCIPSVAMNPFFEELAST 60

Query: 61  YPDALFLTVDVDEVKEVAAKMEIKAMPTFLLMKNGTQIGKLVGANPEEVRKMIDANVETI 120
           YPD LFLTVDVD+VKEVA+K+E+KAMPTF+LMK G Q+ +LVGANPEE+RK ID  V ++
Sbjct: 61  YPDVLFLTVDVDDVKEVASKLEVKAMPTFVLMKEGAQVDRLVGANPEEIRKRIDGFVHSV 120

Query: 121 HV 123
            V
Sbjct: 121 RV 122

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BLAST of CmaCh18G003260 vs. TrEMBL
Match: B9RXV0_RICCO (Thioredoxin H-type, putative OS=Ricinus communis GN=RCOM_0906500 PE=4 SV=1)

HSP 1 Score: 171.0 bits (432), Expect = 8.9e-40
Identity = 82/122 (67.21%), Postives = 102/122 (83.61%), Query Frame = 1


Query: 1   MEGQEQWRQIRVVKIESMESWNSFVTKAAQQDSLIVVHFTASWCMPSVAMNPFFEELAFN 60
           ME Q+Q  + RVVK++S+ESW+ +VT+A  Q   IVVHFTASWC+PS+AMNPFFEE+A  
Sbjct: 1   MESQDQQPKSRVVKVDSVESWDFYVTQATNQGCPIVVHFTASWCIPSLAMNPFFEEVASA 60

Query: 61  YPDALFLTVDVDEVKEVAAKMEIKAMPTFLLMKNGTQIGKLVGANPEEVRKMIDANVETI 120
            PDALFLTVDVD+VKEVA KME+KAMPTF+LMKNG Q+ K+VGANPEE+RK ID  V+++
Sbjct: 61  NPDALFLTVDVDDVKEVAGKMEVKAMPTFVLMKNGAQVDKVVGANPEEIRKRIDGFVQSV 120

Query: 121 HV 123
            V
Sbjct: 121 RV 122

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BLAST of CmaCh18G003260 vs. TrEMBL
Match: Q9XF70_HEVBR (Thioredoxin h OS=Hevea brasiliensis PE=2 SV=1)

HSP 1 Score: 169.9 bits (429), Expect = 2.0e-39
Identity = 84/123 (68.29%), Postives = 101/123 (82.11%), Query Frame = 1


Query: 1   MEGQEQWRQIRVVKIESMESWNSFVTKAAQQDSLIVVHFTASWCMPSVAMNPFFEELAFN 60
           ME QEQ  + RVVK++S+ESW+ +VT+A  Q   IVVHFTASWC+PSVAMNPFFEELA  
Sbjct: 1   METQEQQAKSRVVKVDSVESWDFYVTQANNQGCPIVVHFTASWCIPSVAMNPFFEELASA 60

Query: 61  YPDALFLTVDVDEVKEVAAKMEIKAMPTFLLMKNGTQIGKLVGANPEEVRKMIDANVETI 120
           YPD LFL VDVDEVKEVA+K+E+KAMPTF+LMK+G QI +LVGANPEE+RK I    ++I
Sbjct: 61  YPDVLFLAVDVDEVKEVASKLEVKAMPTFVLMKDGAQIDRLVGANPEEIRKRIGGFAQSI 120

Query: 121 HVA 124
            VA
Sbjct: 121 RVA 123

[Close]

BLAST of CmaCh18G003260 vs. TrEMBL
Match: A0A061GGI1_THECC (C-terminal cysteine residue is changed to a serine 1 OS=Theobroma cacao GN=TCM_030081 PE=4 SV=1)

HSP 1 Score: 169.5 bits (428), Expect = 2.6e-39
Identity = 84/122 (68.85%), Postives = 100/122 (81.97%), Query Frame = 1


Query: 1   MEGQEQWRQIRVVKIESMESWNSFVTKAAQQDSLIVVHFTASWCMPSVAMNPFFEELAFN 60
           MEGQEQ  + RVVKI+S+ESW+ +V +A  Q   IVVHFTASWCMPSVAMNPFFEELA +
Sbjct: 1   MEGQEQQSKSRVVKIDSVESWDFYVNQATNQGCPIVVHFTASWCMPSVAMNPFFEELASS 60

Query: 61  YPDALFLTVDVDEVKEVAAKMEIKAMPTFLLMKNGTQIGKLVGANPEEVRKMIDANVETI 120
           + D LFLTVDVD+VKEVA +MEIKAMPTFLLM+ GT + KLVGANPEE+RK I   V++I
Sbjct: 61  FQDVLFLTVDVDDVKEVATRMEIKAMPTFLLMRGGTVVDKLVGANPEEIRKRIHGFVQSI 120

Query: 121 HV 123
            +
Sbjct: 121 RL 122

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BLAST of CmaCh18G003260 vs. TAIR10
Match: AT1G11530.1 (AT1G11530.1 C-terminal cysteine residue is changed to a serine 1)

HSP 1 Score: 152.9 bits (385), Expect = 1.3e-37
Identity = 73/116 (62.93%), Postives = 94/116 (81.03%), Query Frame = 1


Query: 11  RVVKIESMESWNSFVTKAAQQDSLIVVHFTASWCMPSVAMNPFFEELAFNYPDALFLTVD 70
           RVVKI+S ESWN +V++A  Q+  IV HFTA WC+PSV MN FFEELAFNY DALFL VD
Sbjct: 3   RVVKIDSAESWNFYVSQAKNQNCPIVAHFTALWCIPSVFMNSFFEELAFNYKDALFLIVD 62

Query: 71  VDEVKEVAAKMEIKAMPTFLLMKNGTQIGKLVGANPEEVRKMIDANVET---IHVA 124
           VDEVKEVA+++E+KAMPTFL +K+G  + KLVGANP+E++K +D  V++   +H+A
Sbjct: 63  VDEVKEVASQLEVKAMPTFLFLKDGNAMDKLVGANPDEIKKRVDGFVQSSRVVHIA 118

[Close]

BLAST of CmaCh18G003260 vs. TAIR10
Match: AT3G08710.1 (AT3G08710.1 thioredoxin H-type 9)

HSP 1 Score: 96.7 bits (239), Expect = 1.1e-20
Identity = 43/106 (40.57%), Postives = 71/106 (66.98%), Query Frame = 1


Query: 15  IESMESWNSFVTKAAQQDSLIVVHFTASWCMPSVAMNPFFEELAFNYPDALFLTVDVDEV 74
           I + ESW+  + +A +   ++V +F+A+WC P   + PFF EL+  +   +FL VDVDE+
Sbjct: 28  ITTKESWDDKLAEADRDGKIVVANFSATWCGPCKIVAPFFIELSEKHSSLMFLLVDVDEL 87

Query: 75  KEVAAKMEIKAMPTFLLMKNGTQIGKLVGANPEEVRKMIDANVETI 121
            + ++  +IKA PTF  +KNG QIGKLVGAN  E++K + + ++++
Sbjct: 88  SDFSSSWDIKATPTFFFLKNGQQIGKLVGANKPELQKKVTSIIDSV 133

[Close]

BLAST of CmaCh18G003260 vs. TAIR10
Match: AT3G51030.1 (AT3G51030.1 thioredoxin H-type 1)

HSP 1 Score: 96.7 bits (239), Expect = 1.1e-20
Identity = 46/103 (44.66%), Postives = 68/103 (66.02%), Query Frame = 1


Query: 11  RVVKIESMESWNSFVTKAAQQDSLIVVHFTASWCMPSVAMNPFFEELAFNYPDALFLTVD 70
           +V+   ++E+WN  + KA +  +L+VV FTASWC P   + PFF +LA   P+ LFL VD
Sbjct: 7   QVIACHTVETWNEQLQKANESKTLVVVDFTASWCGPCRFIAPFFADLAKKLPNVLFLKVD 66

Query: 71  VDEVKEVAAKMEIKAMPTFLLMKNGTQIGKLVGANPEEVRKMI 114
            DE+K VA+   I+AMPTF+ +K G  + K+VGA  +E++  I
Sbjct: 67  TDELKSVASDWAIQAMPTFMFLKEGKILDKVVGAKKDELQSTI 109

[Close]

BLAST of CmaCh18G003260 vs. TAIR10
Match: AT3G56420.1 (AT3G56420.1 Thioredoxin superfamily protein)

HSP 1 Score: 88.2 bits (217), Expect = 3.9e-18
Identity = 38/101 (37.62%), Postives = 64/101 (63.37%), Query Frame = 1


Query: 11  RVVKIESMESWNSFVTKAAQQDSLIVVHFTASWCMPSVAMNPFFEELAFNYPDALFLTVD 70
           +V  +  +E W   +T+A     ++VV+F+A WC+P   + P F +LA  YP  +F+TVD
Sbjct: 41  KVHPVSRIEKWEEKITEANNHGKILVVNFSAPWCVPCKKIEPVFRDLASRYPSMIFVTVD 100

Query: 71  VDEVKEVAAKMEIKAMPTFLLMKNGTQIGKLVGANPEEVRK 112
           V+E+ E + +  ++A PT + +K+G Q+ KLVGA   E++K
Sbjct: 101 VEELAEFSNEWNVEATPTVVFLKDGRQMDKLVGAETSELQK 141

[Close]

BLAST of CmaCh18G003260 vs. TAIR10
Match: AT1G45145.1 (AT1G45145.1 thioredoxin H-type 5)

HSP 1 Score: 88.2 bits (217), Expect = 3.9e-18
Identity = 40/102 (39.22%), Postives = 64/102 (62.75%), Query Frame = 1


Query: 12  VVKIESMESWNSFVTKAAQQDSLIVVHFTASWCMPSVAMNPFFEELAFNYPDALFLTVDV 71
           V+   ++E WN  V  A +   LIV+ FTASWC P   + P F E+A  + + +F  +DV
Sbjct: 7   VIACHTLEVWNEKVKDANESKKLIVIDFTASWCPPCRFIAPVFAEMAKKFTNVVFFKIDV 66

Query: 72  DEVKEVAAKMEIKAMPTFLLMKNGTQIGKLVGANPEEVRKMI 114
           DE++ VA + +++AMPTF+ MK G  I ++VGA  +E+ + +
Sbjct: 67  DELQAVAQEFKVEAMPTFVFMKEGNIIDRVVGAAKDEINEKL 108

[Close]

BLAST of CmaCh18G003260 vs. NCBI nr
Match: gi|659067849|ref|XP_008441601.1| (PREDICTED: thioredoxin-like protein CXXS1 [Cucumis melo])

HSP 1 Score: 213.8 bits (543), Expect = 1.7e-52
Identity = 104/123 (84.55%), Postives = 112/123 (91.06%), Query Frame = 1


Query: 1   MEGQEQWRQIRVVKIESMESWNSFVTKAAQQDSLIVVHFTASWCMPSVAMNPFFEELAFN 60
           MEGQ+QWR+ RVVKIESMESWN ++TKA QQDSLIVVHFTASWCMPSVAMNPFFEELA  
Sbjct: 1   MEGQDQWRRTRVVKIESMESWNFYLTKAIQQDSLIVVHFTASWCMPSVAMNPFFEELALT 60

Query: 61  YPDALFLTVDVDEVKEVAAKMEIKAMPTFLLMKNGTQIGKLVGANPEEVRKMIDANVETI 120
           YPD LFLTVDVDEVKEVAAK+EIKAMPTFL+MKNGTQI KLVGANPEE+RK I A  ET+
Sbjct: 61  YPDVLFLTVDVDEVKEVAAKLEIKAMPTFLMMKNGTQIDKLVGANPEEIRKRIGAYTETV 120

Query: 121 HVA 124
           HVA
Sbjct: 121 HVA 123

[Close]

BLAST of CmaCh18G003260 vs. NCBI nr
Match: gi|449454702|ref|XP_004145093.1| (PREDICTED: thioredoxin-like protein CXXS1 [Cucumis sativus])

HSP 1 Score: 204.9 bits (520), Expect = 8.0e-50
Identity = 101/123 (82.11%), Postives = 109/123 (88.62%), Query Frame = 1


Query: 1   MEGQEQWRQIRVVKIESMESWNSFVTKAAQQDSLIVVHFTASWCMPSVAMNPFFEELAFN 60
           MEGQ+QW++ RVVKIESMESWN  +TKA QQDSLIVVHFTASWCMPSVAMNPFFEELA  
Sbjct: 1   MEGQDQWQRTRVVKIESMESWNFNLTKAIQQDSLIVVHFTASWCMPSVAMNPFFEELALT 60

Query: 61  YPDALFLTVDVDEVKEVAAKMEIKAMPTFLLMKNGTQIGKLVGANPEEVRKMIDANVETI 120
           YPD LFLTVDVDEVKEVAAK+EIKAMPTFL+MKNG  I KLVGANPEE+RK I A  ET+
Sbjct: 61  YPDVLFLTVDVDEVKEVAAKLEIKAMPTFLVMKNGNLIDKLVGANPEEIRKRIGAYTETV 120

Query: 121 HVA 124
           HVA
Sbjct: 121 HVA 123

[Close]

BLAST of CmaCh18G003260 vs. NCBI nr
Match: gi|802779811|ref|XP_012091425.1| (PREDICTED: thioredoxin-like protein CXXS1 [Jatropha curcas])

HSP 1 Score: 171.4 bits (433), Expect = 9.8e-40
Identity = 82/122 (67.21%), Postives = 100/122 (81.97%), Query Frame = 1


Query: 1   MEGQEQWRQIRVVKIESMESWNSFVTKAAQQDSLIVVHFTASWCMPSVAMNPFFEELAFN 60
           ME QEQ  + RVVK++S++SW  +VT+A  Q   IVVHFTASWC+PSVAMNPFFEELA  
Sbjct: 1   MENQEQQTKSRVVKVDSVQSWEFYVTQANNQGCPIVVHFTASWCIPSVAMNPFFEELAST 60

Query: 61  YPDALFLTVDVDEVKEVAAKMEIKAMPTFLLMKNGTQIGKLVGANPEEVRKMIDANVETI 120
           YPD LFLTVDVD+VKEVA+K+E+KAMPTF+LMK G Q+ +LVGANPEE+RK ID  V ++
Sbjct: 61  YPDVLFLTVDVDDVKEVASKLEVKAMPTFVLMKEGAQVDRLVGANPEEIRKRIDGFVHSV 120

Query: 121 HV 123
            V
Sbjct: 121 RV 122

[Close]

BLAST of CmaCh18G003260 vs. NCBI nr
Match: gi|255555063|ref|XP_002518569.1| (PREDICTED: thioredoxin-like protein CXXS1 [Ricinus communis])

HSP 1 Score: 171.0 bits (432), Expect = 1.3e-39
Identity = 82/122 (67.21%), Postives = 102/122 (83.61%), Query Frame = 1


Query: 1   MEGQEQWRQIRVVKIESMESWNSFVTKAAQQDSLIVVHFTASWCMPSVAMNPFFEELAFN 60
           ME Q+Q  + RVVK++S+ESW+ +VT+A  Q   IVVHFTASWC+PS+AMNPFFEE+A  
Sbjct: 1   MESQDQQPKSRVVKVDSVESWDFYVTQATNQGCPIVVHFTASWCIPSLAMNPFFEEVASA 60

Query: 61  YPDALFLTVDVDEVKEVAAKMEIKAMPTFLLMKNGTQIGKLVGANPEEVRKMIDANVETI 120
            PDALFLTVDVD+VKEVA KME+KAMPTF+LMKNG Q+ K+VGANPEE+RK ID  V+++
Sbjct: 61  NPDALFLTVDVDDVKEVAGKMEVKAMPTFVLMKNGAQVDKVVGANPEEIRKRIDGFVQSV 120

Query: 121 HV 123
            V
Sbjct: 121 RV 122

[Close]

BLAST of CmaCh18G003260 vs. NCBI nr
Match: gi|1009108717|ref|XP_015886193.1| (PREDICTED: thioredoxin-like protein CXXS1 isoform X1 [Ziziphus jujuba])

HSP 1 Score: 169.9 bits (429), Expect = 2.9e-39
Identity = 84/125 (67.20%), Postives = 103/125 (82.40%), Query Frame = 1


Query: 1   MEGQEQWRQ---IRVVKIESMESWNSFVTKAAQQDSLIVVHFTASWCMPSVAMNPFFEEL 60
           MEGQ+Q  Q    + VK++S+ESW+SFV +A  Q   IVVHFTASWCMPSVAMNPFFEEL
Sbjct: 1   MEGQQQVEQQIKSKAVKVDSVESWDSFVGQATNQGCPIVVHFTASWCMPSVAMNPFFEEL 60

Query: 61  AFNYPDALFLTVDVDEVKEVAAKMEIKAMPTFLLMKNGTQIGKLVGANPEEVRKMIDANV 120
           A ++PD LFLTVDVDEVKEVA+++EIKAMPTFLLM++G Q+ KLVGANPEE+RK ++A V
Sbjct: 61  ASSFPDVLFLTVDVDEVKEVASRLEIKAMPTFLLMRDGAQVDKLVGANPEEIRKRVEAFV 120

Query: 121 ETIHV 123
            +  V
Sbjct: 121 HSFRV 125

The following BLAST results are available for this feature:

BLAST of CmaCh18G003260 vs. Swiss-Prot


Match Name	E-value	Identity	Description
CXXS1_ARATH	2.3e-36	62.93	Thioredoxin-like protein CXXS1 OS=Arabidopsis thaliana GN=CXXS1 PE=2 SV=2	[more]
CXXS1_ORYSJ	3.9e-28	51.79	Thioredoxin-like protein CXXS1 OS=Oryza sativa subsp. japonica GN=Os04g0629500 P...	[more]
TRXH1_ARATH	1.9e-19	44.66	Thioredoxin H1 OS=Arabidopsis thaliana GN=TRX1 PE=1 SV=1	[more]
TRXH9_ARATH	1.9e-19	40.57	Thioredoxin H9 OS=Arabidopsis thaliana GN=TRX9 PE=1 SV=1	[more]
TRXH_POPJC	4.3e-19	38.68	Thioredoxin H-type OS=Populus jackii PE=1 SV=1	[more]

BLAST of CmaCh18G003260 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LUX0_CUCSA	5.6e-50	82.11	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G065970 PE=4 SV=1	[more]
A0A067JAI5_JATCU	6.8e-40	67.21	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_21292 PE=4 SV=1	[more]
B9RXV0_RICCO	8.9e-40	67.21	Thioredoxin H-type, putative OS=Ricinus communis GN=RCOM_0906500 PE=4 SV=1	[more]
Q9XF70_HEVBR	2.0e-39	68.29	Thioredoxin h OS=Hevea brasiliensis PE=2 SV=1	[more]
A0A061GGI1_THECC	2.6e-39	68.85	C-terminal cysteine residue is changed to a serine 1 OS=Theobroma cacao GN=TCM_0...	[more]

BLAST of CmaCh18G003260 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G11530.1	1.3e-37	62.93	C-terminal cysteine residue is changed to a serine 1	[more]
AT3G08710.1	1.1e-20	40.57	thioredoxin H-type 9	[more]
AT3G51030.1	1.1e-20	44.66	thioredoxin H-type 1	[more]
AT3G56420.1	3.9e-18	37.62	Thioredoxin superfamily protein	[more]
AT1G45145.1	3.9e-18	39.22	thioredoxin H-type 5	[more]

BLAST of CmaCh18G003260 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659067849\|ref\|XP_008441601.1\|	1.7e-52	84.55	PREDICTED: thioredoxin-like protein CXXS1 [Cucumis melo]	[more]
gi\|449454702\|ref\|XP_004145093.1\|	8.0e-50	82.11	PREDICTED: thioredoxin-like protein CXXS1 [Cucumis sativus]	[more]
gi\|802779811\|ref\|XP_012091425.1\|	9.8e-40	67.21	PREDICTED: thioredoxin-like protein CXXS1 [Jatropha curcas]	[more]
gi\|255555063\|ref\|XP_002518569.1\|	1.3e-39	67.21	PREDICTED: thioredoxin-like protein CXXS1 [Ricinus communis]	[more]
gi\|1009108717\|ref\|XP_015886193.1\|	2.9e-39	67.20	PREDICTED: thioredoxin-like protein CXXS1 isoform X1 [Ziziphus jujuba]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR005746	Thioredoxin
IPR012336	Thioredoxin-like_fold
IPR013766	Thioredoxin_domain

Vocabulary: **Biological Process**
Term	Definition
GO:0006662	glycerol ether metabolic process
GO:0045454	cell redox homeostasis

Vocabulary: **Molecular Function**
Term	Definition
GO:0015035	protein disulfide oxidoreductase activity

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045454	cell redox homeostasis
biological_process	GO:0006662	glycerol ether metabolic process
biological_process	GO:0055114	oxidation-reduction process
biological_process	GO:0006661	phosphatidylinositol biosynthetic process
biological_process	GO:0006457	protein folding
cellular_component	GO:0005829	cytosol
cellular_component	GO:0005623	cell
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003756	protein disulfide isomerase activity
molecular_function	GO:0015035	protein disulfide oxidoreductase activity
molecular_function	GO:0046983	protein dimerization activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh18G003260.1	CmaCh18G003260.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005746	Thioredoxin	PANTHER	PTHR10438	THIOREDOXIN	coord: 1..121 score: 1.2
IPR012336	Thioredoxin-like fold	GENE3D	G3DSA:3.40.30.10		coord: 12..116 score: 3.0
IPR012336	Thioredoxin-like fold	unknown	SSF52833	Thioredoxin-like	coord: 5..113 score: 2.63
IPR013766	Thioredoxin domain	PFAM	PF00085	Thioredoxin	coord: 19..115 score: 7.1
IPR013766	Thioredoxin domain	PROFILE	PS51352	THIOREDOXIN_2	coord: 1..118 score: 11
None	No IPR available	PANTHER	PTHR10438:SF242	THIOREDOXIN-LIKE PROTEIN CXXS1	coord: 1..121 score: 1.2

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh18G003260	Cla019421	Watermelon (97103) v1	cmawmB367
CmaCh18G003260	Csa1G065970	Cucumber (Chinese Long) v2	cmacuB391
CmaCh18G003260	MELO3C002508	Melon (DHL92) v3.5.1	cmameB364
CmaCh18G003260	ClCG03G005110	Watermelon (Charleston Gray)	cmawcgB354
CmaCh18G003260	CSPI01G11210	Wild cucumber (PI 183967)	cmacpiB395
CmaCh18G003260	CmoCh18G003080	Cucurbita moschata (Rifu)	cmacmoB407
CmaCh18G003260	CmoCh09G009200	Cucurbita moschata (Rifu)	cmacmoB385
CmaCh18G003260	Lsi04G012460	Bottle gourd (USVL1VR-Ls)	cmalsiB382
CmaCh18G003260	Lsi02G006570	Bottle gourd (USVL1VR-Ls)	cmalsiB369
CmaCh18G003260	Cp4.1LG06g09060	Cucurbita pepo (Zucchini)	cmacpeB454
CmaCh18G003260	Cp4.1LG09g08800	Cucurbita pepo (Zucchini)	cmacpeB415
CmaCh18G003260	MELO3C002508.2	Melon (DHL92) v3.6.1	cmamedB423
CmaCh18G003260	CsaV3_1G011310	Cucumber (Chinese Long) v3	cmacucB0465
CmaCh18G003260	Cla97C03G056320	Watermelon (97103) v2	cmawmbB413
CmaCh18G003260	Bhi08G001423	Wax gourd	cmawgoB0530
CmaCh18G003260	CsGy1G011150	Cucumber (Gy14) v2	cgybcmaB086
CmaCh18G003260	Carg12793	Silver-seed gourd	carcmaB1244
CmaCh18G003260	Carg26529	Silver-seed gourd	carcmaB1108

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmaCh18G003260	CmaCh09G009230	Cucurbita maxima (Rimu)	cmacmaB043

The following block(s) are covering this gene:

None