CmaCh18G003240 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh18G003240
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	Cycloeucalenol cycloisomerase-like protein
Location	Cma_Chr18 : 1735188 .. 1738353 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AGTGATCGGAGTGCAACAATGGCGAAAATTTGTATTTAAAAGGAAGCAGTCATCCTTAGTCATCGGCTTTGTGCTGTAAATCTTGGAATTGCGAAGCCAGAAACTACACTCTCTCTGTTTTCAGATTTCAGTCGGAGAAAGCCGAGATCGATCAACGTCGTTCAGATTCTTAATCGCTGTAATGGCCGGTGAGATTTCTTCTCTTCGTTTCGTTTTCCTCTGCTTTCGAATCCTGTATGATACTGTTCTTAACAATGTCCAGATCGAGCGCGCGCTACCGCTCGTTCTTTTAGCCTATGGCTCTCATCGAATCCAAGCAAGAGATGGGGAGAATTGTTTTTTCTTTCCTATACTCCATTTTGGCTAACTCTTTGCTTGGGAATCATCGTCCCTTTCAAACTCTACGAGGTTTGCCCTCTCGAACTCGCTGAAATGGTGCCATTATCAACACTCTTTCTTTTGTTTGATATCACTGTATTGCTTGTAGTTTTATCTTGTTTCTGTTCATATTCGACTTTGTTTTCGAGAAGTCATCAAGGAAGAATGGAAGTGGCTAGGTTTCAAGATAGAATAGGGATTTAACCAAGAATTGGGACTCAACTGTGTTATGATTAAGCCTTTTCTGTTCTTGAAACCGATAATCATCCACAAATTGCTTTGAGATGAACTTTTCTCAAATCTTTCTATTATCAAAAGTCTAAACATGATGATTCTGATTGACAGAGTTTCACGGAAATGGAATATATGGTTCTTGGTTTGGTTGCAGCAGTTCCTTCTTTCTTGATACCAGTGGTGTGGCCTGGAGAGGTACAATTTACTACCTCTTCATTTCTATGATCCGATAACCAAACCCCCTTCACATATTTGTTTATGGGAACCAATGGATTACAGGTTAACTTCATGGGACAGGAAGATTTTCTTCAGTCTAAGGACTGGTGTTTCCCTAAGATTCACATGTGAAACTGAATGTTAATCACTAAAAAGTTCTAAAAAATCAAGATCTAGGCATATCAAGTGATATAATTTGCTTGGAATTGGTTGCAGGCTGACAGGAATTTGCCTTGGAAAGAGCGTTATTGGGTAAAGGTTCGTTTTCTACCCTTTTTTAGCATTAATACCATTAATGTAACCATCCAAGCCCAAACTCAAATCTACCGTTAGCAGATATTGTCATTTTTGTGTTTTTCCTTTCAGACTTCCCCTCAAGGTTTTTAAAACACGGTAGAGGTTTCTACACTTTTTATAAACAATGCTTCTGGTTGTTACAAGTGGTATCAGAGCCCGATACCGAGGGGAGGAGAACAAAGTATTTTTTTTTAAGGATGTGGAAACCTCTCCCAAATAAACGTATTTAAAAGTCTTGAGAAGAAGCCCAAAAAAGACTAATATATGCTAGAGGTGGGATTGAACTCTCAACTCTCAAACTAGATGGCTACCACATCAATTTAAACTCTACCTAAGATGTTTTCCTCTTTGTGGCAGGTTAGTCTATGGATAGCAATCTTCAGCTACGTGGGAAATTACTTTTGGACTCACTACTTTTTCACTGTTTTGGGGGCATCTTATACGTTTCCATCATGGAGGATGAACAATGTAAGAACGGAAAGAATTGAAAGGAAAAGTAGAAGAAAATATCAGAAAGAAGATAAAGGATTTGTTAATTTTGCAGGTACCTCATACGACGTTTCTTCTTACGCATGTCTGCTTTCTATTGTATCATGTCACATCCAACATGACTCTTAGAAGACTCCGGCATTCTATTGCCGGCTTGCCAGAGCATATTCAACGGGCTACCATGGTTGCATGGATTGTGGCTCTCTCATACTTCGTTGCATACTTGGAGACTCTGGCCATTTCTAATGTAATTTCCTATCTTTCTCCTCTTTTGTTCTTACAAAACTATTTCCAAGAAACCTTTTCTGATATGAAGAGGAAAAGGAGAAAAAATGAAATCTTCCTACTTGAAGAATCAGTCTTTTAGTTTATAACTCTTTTTTATATAGTAATTCAACCTATTGATACTTTGGGCGTGGGTAGTTCCCTTACTACCAATTTCAGGATCGGGATTCAATGTACAAATTTGGCTCTCTGTTCTATGCTATCTACTTCTTCGTCAGCTTCCCAATGTTCTTGAGGTAAGATCTCACTCTTGGTGCCTTAGTATGTATAAACAAGACACAAGTCTGCCATTTTTCTTCATGAGTTACAAAAACTAGACAAGGGAAGGAAGACAAATGACTACGATGGGGTACCCAGATTTTCCATGATTCCTTTGAATCATCTTCTATAGTTGTCACTCGCCTTTGCACATAATATGTATAAACATAAACTTCTGTAGTAGTTTGTCGAATTCCATATTACTTGAAAAGAAGAACGAAACATTCCTCACGAGAGTGAAAATTTCTCTCTAACAGACAAATATTGGCTAGCAGTGAGCTTGGACTGTTACAAATTGTATTAGAACCAGACACCGAGCAATGTGTCAATAAGGATGCTAGCCCCACGGGAGATAGATTGTGAGATTCCACGTCAAGCTATAATTTGTCCAATAGTGTTGAAAATTTAGGCGACTATAGTTTGTCCAATAGTGTTAAAAATTTAGGCGACTATAGTTTGTCTAGTGTTAAAAATTTAGGTGACTCTTACTTGTAGATGTAGCTGCCAAGTTTGGACCTTCATAGCTCTATTTTATCACATTAAGCCGTAGGGGCTTGTAAAGCATGCTTACACTTCTTTCTAATATCCTCCCATCATGTTGATTCAATGCACAACAGGATTGATGAGAAGCCTGGTGATCTCTGGGACTTGCAAAGAGTGGCCGTTGATTCTCTGGGAGCAGCAATGTTGGTGACAATCGTACTCGATCTATGGCGCATCTTCCTGGGGCCGATTGTACCAATTCCAAAAAAGCGATGCAGTGAGCCAGGGCTGCCATGGTTTCTTTAACAAATCAAATGAAACTTCAAAACCTGTTACCGTAGTTTTAGTTCAATTTTTTGACACTCTGAAACCCTTGTTTCAGATACCTTAAATAAAACAAAAAACTTCCTCATTGTCTACCACTTAACACTATTTGTGAGTTTTCCCTCACAAATTTACAAAGAGAGAAAACAAATATTAGATTCTTTGCTGTAATATGGTGTCATACACCTGCATCATTTTCCAC

mRNA sequence

AGTGATCGGAGTGCAACAATGGCGAAAATTTGTATTTAAAAGGAAGCAGTCATCCTTAGTCATCGGCTTTGTGCTGTAAATCTTGGAATTGCGAAGCCAGAAACTACACTCTCTCTGTTTTCAGATTTCAGTCGGAGAAAGCCGAGATCGATCAACGTCGTTCAGATTCTTAATCGCTGTAATGGCCGATCGAGCGCGCGCTACCGCTCGTTCTTTTAGCCTATGGCTCTCATCGAATCCAAGCAAGAGATGGGGAGAATTGTTTTTTCTTTCCTATACTCCATTTTGGCTAACTCTTTGCTTGGGAATCATCGTCCCTTTCAAACTCTACGAGAGTTTCACGGAAATGGAATATATGGTTCTTGGTTTGGTTGCAGCAGTTCCTTCTTTCTTGATACCAGTGGTGTGGCCTGGAGAGGTTAGTCTATGGATAGCAATCTTCAGCTACGTGGGAAATTACTTTTGGACTCACTACTTTTTCACTGTTTTGGGGGCATCTTATACGTTTCCATCATGGAGGATGAACAATGTACCTCATACGACGTTTCTTCTTACGCATGTCTGCTTTCTATTGTATCATGTCACATCCAACATGACTCTTAGAAGACTCCGGCATTCTATTGCCGGCTTGCCAGAGCATATTCAACGGGCTACCATGGTTGCATGGATTGTGGCTCTCTCATACTTCGTTGCATACTTGGAGACTCTGGCCATTTCTAATTTCCCTTACTACCAATTTCAGGATCGGGATTCAATGTACAAATTTGGCTCTCTGTTCTATGCTATCTACTTCTTCGTCAGCTTCCCAATGTTCTTGAGGATTGATGAGAAGCCTGGTGATCTCTGGGACTTGCAAAGAGTGGCCGTTGATTCTCTGGGAGCAGCAATGTTGGTGACAATCGTACTCGATCTATGGCGCATCTTCCTGGGGCCGATTGTACCAATTCCAAAAAAGCGATGCAGTGAGCCAGGGCTGCCATGGTTTCTTTAACAAATCAAATGAAACTTCAAAACCTGTTACCGTAGTTTTAGTTCAATTTTTTGACACTCTGAAACCCTTGTTTCAGATACCTTAAATAAAACAAAAAACTTCCTCATTGTCTACCACTTAACACTATTTGTGAGTTTTCCCTCACAAATTTACAAAGAGAGAAAACAAATATTAGATTCTTTGCTGTAATATGGTGTCATACACCTGCATCATTTTCCAC

Coding sequence (CDS)

ATGGCCGATCGAGCGCGCGCTACCGCTCGTTCTTTTAGCCTATGGCTCTCATCGAATCCAAGCAAGAGATGGGGAGAATTGTTTTTTCTTTCCTATACTCCATTTTGGCTAACTCTTTGCTTGGGAATCATCGTCCCTTTCAAACTCTACGAGAGTTTCACGGAAATGGAATATATGGTTCTTGGTTTGGTTGCAGCAGTTCCTTCTTTCTTGATACCAGTGGTGTGGCCTGGAGAGGTTAGTCTATGGATAGCAATCTTCAGCTACGTGGGAAATTACTTTTGGACTCACTACTTTTTCACTGTTTTGGGGGCATCTTATACGTTTCCATCATGGAGGATGAACAATGTACCTCATACGACGTTTCTTCTTACGCATGTCTGCTTTCTATTGTATCATGTCACATCCAACATGACTCTTAGAAGACTCCGGCATTCTATTGCCGGCTTGCCAGAGCATATTCAACGGGCTACCATGGTTGCATGGATTGTGGCTCTCTCATACTTCGTTGCATACTTGGAGACTCTGGCCATTTCTAATTTCCCTTACTACCAATTTCAGGATCGGGATTCAATGTACAAATTTGGCTCTCTGTTCTATGCTATCTACTTCTTCGTCAGCTTCCCAATGTTCTTGAGGATTGATGAGAAGCCTGGTGATCTCTGGGACTTGCAAAGAGTGGCCGTTGATTCTCTGGGAGCAGCAATGTTGGTGACAATCGTACTCGATCTATGGCGCATCTTCCTGGGGCCGATTGTACCAATTCCAAAAAAGCGATGCAGTGAGCCAGGGCTGCCATGGTTTCTTTAA

Protein sequence

MADRARATARSFSLWLSSNPSKRWGELFFLSYTPFWLTLCLGIIVPFKLYESFTEMEYMVLGLVAAVPSFLIPVVWPGEVSLWIAIFSYVGNYFWTHYFFTVLGASYTFPSWRMNNVPHTTFLLTHVCFLLYHVTSNMTLRRLRHSIAGLPEHIQRATMVAWIVALSYFVAYLETLAISNFPYYQFQDRDSMYKFGSLFYAIYFFVSFPMFLRIDEKPGDLWDLQRVAVDSLGAAMLVTIVLDLWRIFLGPIVPIPKKRCSEPGLPWFL

Homology

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BLAST of CmaCh18G003240 vs. Swiss-Prot
Match: CCI1_ARATH (Cycloeucalenol cycloisomerase OS=Arabidopsis thaliana GN=CPI1 PE=2 SV=1)

HSP 1 Score: 398.3 bits (1022), Expect = 6.8e-110
Identity = 189/271 (69.74%), Postives = 224/271 (82.66%), Query Frame = 1


Query: 13  SLWLSSNPSKRWGELFFLSYTPFWLTLCLGIIVPFKLYESFTEMEYMVLGLVAAVPSFLI 72
           SLWL+ NPSKRWGELFFL YTPFWLTLCLGI+VP+KLYE+FTE+EY++L LV+AVP+F+I
Sbjct: 8   SLWLAPNPSKRWGELFFLFYTPFWLTLCLGIVVPYKLYETFTELEYLLLALVSAVPAFVI 67

Query: 73  PVVWPGEV--------------SLWIAIFSYVGNYFWTHYFFTVLGASYTFPSWRMNNVP 132
           P++  G+               +LWI +FSYVGNYFWTHYFF VLGASYTFPSW+MNNVP
Sbjct: 68  PMLLVGKADRSLCWKDRYWVKANLWIIVFSYVGNYFWTHYFFKVLGASYTFPSWKMNNVP 127

Query: 133 HTTFLLTHVCFLLYHVTSNMTLRRLRHSIAGLPEHIQRATMVAWIVALSYFVAYLETLAI 192
           HTTF LTHVCFL YHV SN+TLRRLRHS A LP+ ++     AWI+ALSYF+AYLET+AI
Sbjct: 128 HTTFFLTHVCFLFYHVASNITLRRLRHSTADLPDSLKWCFEAAWILALSYFIAYLETIAI 187

Query: 193 SNFPYYQFQDRDSMYKFGSLFYAIYFFVSFPMFLRIDEKPGDLWDLQRVAVDSLGAAMLV 252
           +NFPYY+F DR +MY+ G LFYAIYF VSFPMF R+DEK  D WDL RVAVD+LGAAMLV
Sbjct: 188 ANFPYYEFVDRSAMYRVGCLFYAIYFIVSFPMFFRMDEKSTDEWDLSRVAVDALGAAMLV 247

Query: 253 TIVLDLWRIFLGPIVPIPK-KRCSEPGLPWF 269
           TI+LDLWR+FLGPIVP+P+ + C + GLPWF
Sbjct: 248 TIILDLWRLFLGPIVPLPEGQNCLQSGLPWF 278

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BLAST of CmaCh18G003240 vs. TrEMBL
Match: A0A0A0LUD1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G050410 PE=4 SV=1)

HSP 1 Score: 468.8 bits (1205), Expect = 4.5e-129
Identity = 226/273 (82.78%), Postives = 244/273 (89.38%), Query Frame = 1


Query: 11  SFSLWLSSNPSKRWGELFFLSYTPFWLTLCLGIIVPFKLYESFTEMEYMVLGLVAAVPSF 70
           S SLWLSSNPSKRWGELFFLSYTPFWLTLCLGI++PFKLYE FTE+EY++LGL+AA+P+F
Sbjct: 14  SSSLWLSSNPSKRWGELFFLSYTPFWLTLCLGIVIPFKLYERFTELEYLLLGLLAALPAF 73

Query: 71  LIPVVWPGEV--------------SLWIAIFSYVGNYFWTHYFFTVLGASYTFPSWRMNN 130
           LIPVVWPGE               SLWI IFSYVGNYFWTHYFFTVLGASYTFPSWRMN+
Sbjct: 74  LIPVVWPGEADRGLPWKDRYWVKASLWIVIFSYVGNYFWTHYFFTVLGASYTFPSWRMND 133

Query: 131 VPHTTFLLTHVCFLLYHVTSNMTLRRLRHSIAGLPEHIQRATMVAWIVALSYFVAYLETL 190
           VPHTTFLLTHVCFL YHV SNMTLRRLRHS+A LPE+IQ  T+VAWI+ALSYF+AYLETL
Sbjct: 134 VPHTTFLLTHVCFLFYHVASNMTLRRLRHSVADLPENIQWFTLVAWILALSYFIAYLETL 193

Query: 191 AISNFPYYQFQDRDSMYKFGSLFYAIYFFVSFPMFLRIDEKPGDLWDLQRVAVDSLGAAM 250
           AISNFPYYQF DR SMYK GSLFYAIYFFVSFPMFLRIDEKPGDLWDL RVAVDSLGAAM
Sbjct: 194 AISNFPYYQFVDRASMYKVGSLFYAIYFFVSFPMFLRIDEKPGDLWDLPRVAVDSLGAAM 253

Query: 251 LVTIVLDLWRIFLGPIVPIPKKRCSEPGLPWFL 270
           LVTI+LDLWRIFLGPIVP+P K+C +PGLPWFL
Sbjct: 254 LVTILLDLWRIFLGPIVPLPNKQCDQPGLPWFL 286

[Close]

BLAST of CmaCh18G003240 vs. TrEMBL
Match: W9RR26_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_002182 PE=4 SV=1)

HSP 1 Score: 441.8 bits (1135), Expect = 5.9e-121
Identity = 213/265 (80.38%), Postives = 238/265 (89.81%), Query Frame = 1


Query: 5   ARATARSFSLWLSSNPSKRWGELFFLSYTPFWLTLCLGIIVPFKLYESFTEMEYMVLGLV 64
           A++ + S SLWL+ NPSKRWGELFFL YTPFWLTLCLGI+VP+KLYESFTE+EY++LGLV
Sbjct: 4   AKSGSPSPSLWLAPNPSKRWGELFFLCYTPFWLTLCLGIVVPYKLYESFTELEYLLLGLV 63

Query: 65  AAVPSFLIPVVWPGEVSLWIAIFSYVGNYFWTHYFFTVLGASYTFPSWRMNNVPHTTFLL 124
           +AVPSFLIPV++ G+ +LWI IFSYVGNYFWTHYFFTVLGASYTFPSW+MNNVPHTTFLL
Sbjct: 64  SAVPSFLIPVLFVGKANLWIIIFSYVGNYFWTHYFFTVLGASYTFPSWKMNNVPHTTFLL 123

Query: 125 THVCFLLYHVTSNMTLRRLRHSIAGLPEHIQRATMVAWIVALSYFVAYLETLAISNFPYY 184
           THVCFL YHV SNMTLRRLRHSI+ LPE  +     AWI+ALSYF+AYLETLAISNFPYY
Sbjct: 124 THVCFLFYHVASNMTLRRLRHSISDLPEKTRWFFEAAWILALSYFIAYLETLAISNFPYY 183

Query: 185 QFQDRDSMYKFGSLFYAIYFFVSFPMFLRIDEKPGDLWDLQRVAVDSLGAAMLVTIVLDL 244
            F DR SMYK GSLFYAIYF VSFPMFLRIDEKPGD W+L RVAVD+LGAAMLVTI+LDL
Sbjct: 184 DFVDRASMYKVGSLFYAIYFIVSFPMFLRIDEKPGDPWNLPRVAVDALGAAMLVTIILDL 243

Query: 245 WRIFLGPIVPIPK-KRCSEPGLPWF 269
           WRIFLGPIVP+P+ KRC +PGLPWF
Sbjct: 244 WRIFLGPIVPVPETKRCLQPGLPWF 268

[Close]

BLAST of CmaCh18G003240 vs. TrEMBL
Match: A0A0B0P8U0_GOSAR (Cycloeucalenol cycloisomerase-like protein OS=Gossypium arboreum GN=F383_30280 PE=4 SV=1)

HSP 1 Score: 439.1 bits (1128), Expect = 3.8e-120
Identity = 216/273 (79.12%), Postives = 238/273 (87.18%), Query Frame = 1


Query: 11  SFSLWLSSNPSKRWGELFFLSYTPFWLTLCLGIIVPFKLYESFTEMEYMVLGLVAAVPSF 70
           S SLWL++NPSKRWGELFFL YTPFWLTLCLGI+VPFKLYE+FTE+EY++LGLV+A+PSF
Sbjct: 8   SSSLWLAANPSKRWGELFFLCYTPFWLTLCLGIVVPFKLYENFTELEYLLLGLVSAIPSF 67

Query: 71  LIPVVWPGEV--------------SLWIAIFSYVGNYFWTHYFFTVLGASYTFPSWRMNN 130
           LIP++  G+               S+WI IFSYVGNYFWTHYFFTVLGASYTFPSW+MN+
Sbjct: 68  LIPMLVVGKADSSLHWKDRYWVKASVWIVIFSYVGNYFWTHYFFTVLGASYTFPSWKMND 127

Query: 131 VPHTTFLLTHVCFLLYHVTSNMTLRRLRHSIAGLPEHIQRATMVAWIVALSYFVAYLETL 190
           VPHTTFLLTHV FL YHVTSNMTLRRLRHSIA LPE+IQ AT VAWI+ALSYF+AYLETL
Sbjct: 128 VPHTTFLLTHVVFLFYHVTSNMTLRRLRHSIASLPENIQLATEVAWILALSYFIAYLETL 187

Query: 191 AISNFPYYQFQDRDSMYKFGSLFYAIYFFVSFPMFLRIDEKPGDLWDLQRVAVDSLGAAM 250
           AISNFPYY F DR SMYK GSLFYAIYF VSFPMFLRIDEKPGDLWDL RVAVDSLGAAM
Sbjct: 188 AISNFPYYDFVDRASMYKVGSLFYAIYFIVSFPMFLRIDEKPGDLWDLPRVAVDSLGAAM 247

Query: 251 LVTIVLDLWRIFLGPIVPI-PKKRCSEPGLPWF 269
           LVTI+LDLWRIFLGPIVP+   K+C+ PGLPWF
Sbjct: 248 LVTIILDLWRIFLGPIVPLADAKQCTHPGLPWF 280

[Close]

BLAST of CmaCh18G003240 vs. TrEMBL
Match: A0A0L9TG43_PHAAN (Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan682s000100 PE=4 SV=1)

HSP 1 Score: 437.6 bits (1124), Expect = 1.1e-119
Identity = 209/257 (81.32%), Postives = 232/257 (90.27%), Query Frame = 1


Query: 13  SLWLSSNPSKRWGELFFLSYTPFWLTLCLGIIVPFKLYESFTEMEYMVLGLVAAVPSFLI 72
           SLWL+ NPSKRWGELFFL YTPFWLTLCLGI++PF LYE FTE+EY+++GLV+AVP+F+I
Sbjct: 8   SLWLAPNPSKRWGELFFLLYTPFWLTLCLGIVIPFNLYEKFTELEYLLIGLVSAVPAFVI 67

Query: 73  PVVWPGEVSLWIAIFSYVGNYFWTHYFFTVLGASYTFPSWRMNNVPHTTFLLTHVCFLLY 132
           P++  G+ SLWI IFSYVGNYFWTHYFFTVLGASYTFPSW+MNNVPHTTFLLTHVCFL Y
Sbjct: 68  PMLLVGKASLWIIIFSYVGNYFWTHYFFTVLGASYTFPSWKMNNVPHTTFLLTHVCFLFY 127

Query: 133 HVTSNMTLRRLRHSIAGLPEHIQRATMVAWIVALSYFVAYLETLAISNFPYYQFQDRDSM 192
           HV+SNMTLRRLRH IA LPE IQ AT  AWI+AL+YF+AYLETLAISNFPYY+F DRDSM
Sbjct: 128 HVSSNMTLRRLRHFIADLPEKIQWATEAAWILALAYFIAYLETLAISNFPYYEFVDRDSM 187

Query: 193 YKFGSLFYAIYFFVSFPMFLRIDEKPGDLWDLQRVAVDSLGAAMLVTIVLDLWRIFLGPI 252
           YK GSLFYAIYF VSFPMFLRIDEKPGD WDL RVAVD+LGAAMLVTI+LDLWRIFLGPI
Sbjct: 188 YKVGSLFYAIYFIVSFPMFLRIDEKPGDKWDLPRVAVDALGAAMLVTIILDLWRIFLGPI 247

Query: 253 VPIP-KKRCSEPGLPWF 269
           V IP  K+C + GLPWF
Sbjct: 248 VLIPDAKQCPQVGLPWF 264

[Close]

BLAST of CmaCh18G003240 vs. TrEMBL
Match: A0A0D2QG44_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_001G059700 PE=4 SV=1)

HSP 1 Score: 437.2 bits (1123), Expect = 1.5e-119
Identity = 215/273 (78.75%), Postives = 237/273 (86.81%), Query Frame = 1


Query: 11  SFSLWLSSNPSKRWGELFFLSYTPFWLTLCLGIIVPFKLYESFTEMEYMVLGLVAAVPSF 70
           S SLWL++NPSKRWGELFFL YTPFWLTLCLGI+VPFKLYE+FTE+EY+++GLV+A+PSF
Sbjct: 8   SSSLWLAANPSKRWGELFFLCYTPFWLTLCLGIVVPFKLYENFTELEYLLIGLVSAIPSF 67

Query: 71  LIPVVWPGEV--------------SLWIAIFSYVGNYFWTHYFFTVLGASYTFPSWRMNN 130
           LIP++  G+               S+WI IFSYVGNYFWTHYFFTVLGASYTFPSW+MN+
Sbjct: 68  LIPMLVVGKADSSLHWKDRYWVKASVWIVIFSYVGNYFWTHYFFTVLGASYTFPSWKMND 127

Query: 131 VPHTTFLLTHVCFLLYHVTSNMTLRRLRHSIAGLPEHIQRATMVAWIVALSYFVAYLETL 190
           VPHTTFLLTHV FL YHVTSNMTLRRLRHSIA LPE+IQ AT VAWI+ALSYF+AYLETL
Sbjct: 128 VPHTTFLLTHVVFLFYHVTSNMTLRRLRHSIASLPENIQLATEVAWILALSYFIAYLETL 187

Query: 191 AISNFPYYQFQDRDSMYKFGSLFYAIYFFVSFPMFLRIDEKPGDLWDLQRVAVDSLGAAM 250
           AISNFPYY F DR SMYK GSLFYAIYF VSFPMFLRIDEKPGDLWDL RVAVDSLGAAM
Sbjct: 188 AISNFPYYDFVDRASMYKVGSLFYAIYFIVSFPMFLRIDEKPGDLWDLPRVAVDSLGAAM 247

Query: 251 LVTIVLDLWRIFLGPIVPI-PKKRCSEPGLPWF 269
           LVTI+LDLWRIFLGPIVP+   K+C  PGLPWF
Sbjct: 248 LVTIILDLWRIFLGPIVPLADAKQCIHPGLPWF 280

[Close]

BLAST of CmaCh18G003240 vs. TAIR10
Match: AT5G50375.2 (AT5G50375.2 cyclopropyl isomerase)

HSP 1 Score: 348.6 bits (893), Expect = 3.5e-96
Identity = 167/239 (69.87%), Postives = 196/239 (82.01%), Query Frame = 1


Query: 13  SLWLSSNPSKRWGELFFLSYTPFWLTLCLGIIVPFKLYESFTEMEYMVLGLVAAVPSFLI 72
           SLWL+ NPSKRWGELFFL YTPFWLTLCLGI+VP+KLYE+FTE+EY++L LV+AVP+F+I
Sbjct: 8   SLWLAPNPSKRWGELFFLFYTPFWLTLCLGIVVPYKLYETFTELEYLLLALVSAVPAFVI 67

Query: 73  PVVWPGEV--------------SLWIAIFSYVGNYFWTHYFFTVLGASYTFPSWRMNNVP 132
           P++  G+               +LWI +FSYVGNYFWTHYFF VLGASYTFPSW+MNNVP
Sbjct: 68  PMLLVGKADRSLCWKDRYWVKANLWIIVFSYVGNYFWTHYFFKVLGASYTFPSWKMNNVP 127

Query: 133 HTTFLLTHVCFLLYHVTSNMTLRRLRHSIAGLPEHIQRATMVAWIVALSYFVAYLETLAI 192
           HTTF LTHVCFL YHV SN+TLRRLRHS A LP+ ++     AWI+ALSYF+AYLET+AI
Sbjct: 128 HTTFFLTHVCFLFYHVASNITLRRLRHSTADLPDSLKWCFEAAWILALSYFIAYLETIAI 187

Query: 193 SNFPYYQFQDRDSMYKFGSLFYAIYFFVSFPMFLRIDEKPGDLWDLQRVAVDSLGAAML 238
           +NFPYY+F DR +MY+ G LFYAIYF VSFPMF R+DEK  D WDL RVAVD+LGAAML
Sbjct: 188 ANFPYYEFVDRSAMYRVGCLFYAIYFIVSFPMFFRMDEKSTDEWDLSRVAVDALGAAML 246

[Close]

BLAST of CmaCh18G003240 vs. NCBI nr
Match: gi|659067477|ref|XP_008439629.1| (PREDICTED: cycloeucalenol cycloisomerase [Cucumis melo])

HSP 1 Score: 473.0 bits (1216), Expect = 3.4e-130
Identity = 228/273 (83.52%), Postives = 246/273 (90.11%), Query Frame = 1


Query: 11  SFSLWLSSNPSKRWGELFFLSYTPFWLTLCLGIIVPFKLYESFTEMEYMVLGLVAAVPSF 70
           S SLWLSSNPSKRWGELFFLSYTPFWLTLCLGI++PFKLYE FTE+EY++LGL+AA+P+F
Sbjct: 14  SSSLWLSSNPSKRWGELFFLSYTPFWLTLCLGIVIPFKLYERFTELEYLLLGLLAALPAF 73

Query: 71  LIPVVWPGEV--------------SLWIAIFSYVGNYFWTHYFFTVLGASYTFPSWRMNN 130
           LIPVVWPGE               SLWI IFSYVGNYFWTHYFFTVLGASYTFPSWRMN+
Sbjct: 74  LIPVVWPGEADRCLPWKDRYWVKASLWIVIFSYVGNYFWTHYFFTVLGASYTFPSWRMND 133

Query: 131 VPHTTFLLTHVCFLLYHVTSNMTLRRLRHSIAGLPEHIQRATMVAWIVALSYFVAYLETL 190
           VPHTTFLLTHVCFL YHV SNMTLRRLRHS+A LPE+IQ  T+VAWI+ALSYF+AYLETL
Sbjct: 134 VPHTTFLLTHVCFLFYHVASNMTLRRLRHSVADLPENIQWVTLVAWILALSYFIAYLETL 193

Query: 191 AISNFPYYQFQDRDSMYKFGSLFYAIYFFVSFPMFLRIDEKPGDLWDLQRVAVDSLGAAM 250
           AISNFPYYQF DR SMYK GSLFYAIYFFVSFPMFLRIDEKPGDLWDL RVAVDSLGAAM
Sbjct: 194 AISNFPYYQFVDRASMYKVGSLFYAIYFFVSFPMFLRIDEKPGDLWDLPRVAVDSLGAAM 253

Query: 251 LVTIVLDLWRIFLGPIVPIPKKRCSEPGLPWFL 270
           LVTI+LDLWRIFLGPIVP+PKK+CS+PGLPWFL
Sbjct: 254 LVTILLDLWRIFLGPIVPLPKKQCSQPGLPWFL 286

[Close]

BLAST of CmaCh18G003240 vs. NCBI nr
Match: gi|449469635|ref|XP_004152524.1| (PREDICTED: cycloeucalenol cycloisomerase [Cucumis sativus])

HSP 1 Score: 468.8 bits (1205), Expect = 6.5e-129
Identity = 226/273 (82.78%), Postives = 244/273 (89.38%), Query Frame = 1


Query: 11  SFSLWLSSNPSKRWGELFFLSYTPFWLTLCLGIIVPFKLYESFTEMEYMVLGLVAAVPSF 70
           S SLWLSSNPSKRWGELFFLSYTPFWLTLCLGI++PFKLYE FTE+EY++LGL+AA+P+F
Sbjct: 14  SSSLWLSSNPSKRWGELFFLSYTPFWLTLCLGIVIPFKLYERFTELEYLLLGLLAALPAF 73

Query: 71  LIPVVWPGEV--------------SLWIAIFSYVGNYFWTHYFFTVLGASYTFPSWRMNN 130
           LIPVVWPGE               SLWI IFSYVGNYFWTHYFFTVLGASYTFPSWRMN+
Sbjct: 74  LIPVVWPGEADRGLPWKDRYWVKASLWIVIFSYVGNYFWTHYFFTVLGASYTFPSWRMND 133

Query: 131 VPHTTFLLTHVCFLLYHVTSNMTLRRLRHSIAGLPEHIQRATMVAWIVALSYFVAYLETL 190
           VPHTTFLLTHVCFL YHV SNMTLRRLRHS+A LPE+IQ  T+VAWI+ALSYF+AYLETL
Sbjct: 134 VPHTTFLLTHVCFLFYHVASNMTLRRLRHSVADLPENIQWFTLVAWILALSYFIAYLETL 193

Query: 191 AISNFPYYQFQDRDSMYKFGSLFYAIYFFVSFPMFLRIDEKPGDLWDLQRVAVDSLGAAM 250
           AISNFPYYQF DR SMYK GSLFYAIYFFVSFPMFLRIDEKPGDLWDL RVAVDSLGAAM
Sbjct: 194 AISNFPYYQFVDRASMYKVGSLFYAIYFFVSFPMFLRIDEKPGDLWDLPRVAVDSLGAAM 253

Query: 251 LVTIVLDLWRIFLGPIVPIPKKRCSEPGLPWFL 270
           LVTI+LDLWRIFLGPIVP+P K+C +PGLPWFL
Sbjct: 254 LVTILLDLWRIFLGPIVPLPNKQCDQPGLPWFL 286

[Close]

BLAST of CmaCh18G003240 vs. NCBI nr
Match: gi|703132904|ref|XP_010105236.1| (hypothetical protein L484_002182 [Morus notabilis])

HSP 1 Score: 441.8 bits (1135), Expect = 8.5e-121
Identity = 213/265 (80.38%), Postives = 238/265 (89.81%), Query Frame = 1


Query: 5   ARATARSFSLWLSSNPSKRWGELFFLSYTPFWLTLCLGIIVPFKLYESFTEMEYMVLGLV 64
           A++ + S SLWL+ NPSKRWGELFFL YTPFWLTLCLGI+VP+KLYESFTE+EY++LGLV
Sbjct: 4   AKSGSPSPSLWLAPNPSKRWGELFFLCYTPFWLTLCLGIVVPYKLYESFTELEYLLLGLV 63

Query: 65  AAVPSFLIPVVWPGEVSLWIAIFSYVGNYFWTHYFFTVLGASYTFPSWRMNNVPHTTFLL 124
           +AVPSFLIPV++ G+ +LWI IFSYVGNYFWTHYFFTVLGASYTFPSW+MNNVPHTTFLL
Sbjct: 64  SAVPSFLIPVLFVGKANLWIIIFSYVGNYFWTHYFFTVLGASYTFPSWKMNNVPHTTFLL 123

Query: 125 THVCFLLYHVTSNMTLRRLRHSIAGLPEHIQRATMVAWIVALSYFVAYLETLAISNFPYY 184
           THVCFL YHV SNMTLRRLRHSI+ LPE  +     AWI+ALSYF+AYLETLAISNFPYY
Sbjct: 124 THVCFLFYHVASNMTLRRLRHSISDLPEKTRWFFEAAWILALSYFIAYLETLAISNFPYY 183

Query: 185 QFQDRDSMYKFGSLFYAIYFFVSFPMFLRIDEKPGDLWDLQRVAVDSLGAAMLVTIVLDL 244
            F DR SMYK GSLFYAIYF VSFPMFLRIDEKPGD W+L RVAVD+LGAAMLVTI+LDL
Sbjct: 184 DFVDRASMYKVGSLFYAIYFIVSFPMFLRIDEKPGDPWNLPRVAVDALGAAMLVTIILDL 243

Query: 245 WRIFLGPIVPIPK-KRCSEPGLPWF 269
           WRIFLGPIVP+P+ KRC +PGLPWF
Sbjct: 244 WRIFLGPIVPVPETKRCLQPGLPWF 268

[Close]

BLAST of CmaCh18G003240 vs. NCBI nr
Match: gi|728843700|gb|KHG23143.1| (Cycloeucalenol cycloisomerase -like protein [Gossypium arboreum])

HSP 1 Score: 439.1 bits (1128), Expect = 5.5e-120
Identity = 216/273 (79.12%), Postives = 238/273 (87.18%), Query Frame = 1


Query: 11  SFSLWLSSNPSKRWGELFFLSYTPFWLTLCLGIIVPFKLYESFTEMEYMVLGLVAAVPSF 70
           S SLWL++NPSKRWGELFFL YTPFWLTLCLGI+VPFKLYE+FTE+EY++LGLV+A+PSF
Sbjct: 8   SSSLWLAANPSKRWGELFFLCYTPFWLTLCLGIVVPFKLYENFTELEYLLLGLVSAIPSF 67

Query: 71  LIPVVWPGEV--------------SLWIAIFSYVGNYFWTHYFFTVLGASYTFPSWRMNN 130
           LIP++  G+               S+WI IFSYVGNYFWTHYFFTVLGASYTFPSW+MN+
Sbjct: 68  LIPMLVVGKADSSLHWKDRYWVKASVWIVIFSYVGNYFWTHYFFTVLGASYTFPSWKMND 127

Query: 131 VPHTTFLLTHVCFLLYHVTSNMTLRRLRHSIAGLPEHIQRATMVAWIVALSYFVAYLETL 190
           VPHTTFLLTHV FL YHVTSNMTLRRLRHSIA LPE+IQ AT VAWI+ALSYF+AYLETL
Sbjct: 128 VPHTTFLLTHVVFLFYHVTSNMTLRRLRHSIASLPENIQLATEVAWILALSYFIAYLETL 187

Query: 191 AISNFPYYQFQDRDSMYKFGSLFYAIYFFVSFPMFLRIDEKPGDLWDLQRVAVDSLGAAM 250
           AISNFPYY F DR SMYK GSLFYAIYF VSFPMFLRIDEKPGDLWDL RVAVDSLGAAM
Sbjct: 188 AISNFPYYDFVDRASMYKVGSLFYAIYFIVSFPMFLRIDEKPGDLWDLPRVAVDSLGAAM 247

Query: 251 LVTIVLDLWRIFLGPIVPI-PKKRCSEPGLPWF 269
           LVTI+LDLWRIFLGPIVP+   K+C+ PGLPWF
Sbjct: 248 LVTIILDLWRIFLGPIVPLADAKQCTHPGLPWF 280

[Close]

BLAST of CmaCh18G003240 vs. NCBI nr
Match: gi|920682655|gb|KOM29427.1| (hypothetical protein LR48_Vigan682s000100 [Vigna angularis])

HSP 1 Score: 437.6 bits (1124), Expect = 1.6e-119
Identity = 209/257 (81.32%), Postives = 232/257 (90.27%), Query Frame = 1


Query: 13  SLWLSSNPSKRWGELFFLSYTPFWLTLCLGIIVPFKLYESFTEMEYMVLGLVAAVPSFLI 72
           SLWL+ NPSKRWGELFFL YTPFWLTLCLGI++PF LYE FTE+EY+++GLV+AVP+F+I
Sbjct: 8   SLWLAPNPSKRWGELFFLLYTPFWLTLCLGIVIPFNLYEKFTELEYLLIGLVSAVPAFVI 67

Query: 73  PVVWPGEVSLWIAIFSYVGNYFWTHYFFTVLGASYTFPSWRMNNVPHTTFLLTHVCFLLY 132
           P++  G+ SLWI IFSYVGNYFWTHYFFTVLGASYTFPSW+MNNVPHTTFLLTHVCFL Y
Sbjct: 68  PMLLVGKASLWIIIFSYVGNYFWTHYFFTVLGASYTFPSWKMNNVPHTTFLLTHVCFLFY 127

Query: 133 HVTSNMTLRRLRHSIAGLPEHIQRATMVAWIVALSYFVAYLETLAISNFPYYQFQDRDSM 192
           HV+SNMTLRRLRH IA LPE IQ AT  AWI+AL+YF+AYLETLAISNFPYY+F DRDSM
Sbjct: 128 HVSSNMTLRRLRHFIADLPEKIQWATEAAWILALAYFIAYLETLAISNFPYYEFVDRDSM 187

Query: 193 YKFGSLFYAIYFFVSFPMFLRIDEKPGDLWDLQRVAVDSLGAAMLVTIVLDLWRIFLGPI 252
           YK GSLFYAIYF VSFPMFLRIDEKPGD WDL RVAVD+LGAAMLVTI+LDLWRIFLGPI
Sbjct: 188 YKVGSLFYAIYFIVSFPMFLRIDEKPGDKWDLPRVAVDALGAAMLVTIILDLWRIFLGPI 247

Query: 253 VPIP-KKRCSEPGLPWF 269
           V IP  K+C + GLPWF
Sbjct: 248 VLIPDAKQCPQVGLPWF 264

The following BLAST results are available for this feature:

BLAST of CmaCh18G003240 vs. Swiss-Prot


Match Name	E-value	Identity	Description
CCI1_ARATH	6.8e-110	69.74	Cycloeucalenol cycloisomerase OS=Arabidopsis thaliana GN=CPI1 PE=2 SV=1	[more]

BLAST of CmaCh18G003240 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LUD1_CUCSA	4.5e-129	82.78	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G050410 PE=4 SV=1	[more]
W9RR26_9ROSA	5.9e-121	80.38	Uncharacterized protein OS=Morus notabilis GN=L484_002182 PE=4 SV=1	[more]
A0A0B0P8U0_GOSAR	3.8e-120	79.12	Cycloeucalenol cycloisomerase-like protein OS=Gossypium arboreum GN=F383_30280 P...	[more]
A0A0L9TG43_PHAAN	1.1e-119	81.32	Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan682s000100 PE=4 SV=1	[more]
A0A0D2QG44_GOSRA	1.5e-119	78.75	Uncharacterized protein OS=Gossypium raimondii GN=B456_001G059700 PE=4 SV=1	[more]

BLAST of CmaCh18G003240 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G50375.2	3.5e-96	69.87	cyclopropyl isomerase	[more]

BLAST of CmaCh18G003240 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659067477\|ref\|XP_008439629.1\|	3.4e-130	83.52	PREDICTED: cycloeucalenol cycloisomerase [Cucumis melo]	[more]
gi\|449469635\|ref\|XP_004152524.1\|	6.5e-129	82.78	PREDICTED: cycloeucalenol cycloisomerase [Cucumis sativus]	[more]
gi\|703132904\|ref\|XP_010105236.1\|	8.5e-121	80.38	hypothetical protein L484_002182 [Morus notabilis]	[more]
gi\|728843700\|gb\|KHG23143.1\|	5.5e-120	79.12	Cycloeucalenol cycloisomerase -like protein [Gossypium arboreum]	[more]
gi\|920682655\|gb\|KOM29427.1\|	1.6e-119	81.32	hypothetical protein LR48_Vigan682s000100 [Vigna angularis]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR020532	Cycloeucalenol_cycloisomerase

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008152	metabolic process
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0047793	cycloeucalenol cycloisomerase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh18G003240.1	CmaCh18G003240.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR020532	Cycloeucalenol cycloisomerase	PRODOM	PD317471		coord: 13..252 score: 9.0E
None	No IPR available	PANTHER	PTHR35136	FAMILY NOT NAMED	coord: 3..268 score: 1.3E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh18G003240	Cucsa.392020	Cucumber (Gy14) v1	cgycmaB1085
CmaCh18G003240	Cla002612	Watermelon (97103) v1	cmawmB371
CmaCh18G003240	Csa1G050410	Cucumber (Chinese Long) v2	cmacuB397
CmaCh18G003240	MELO3C002354	Melon (DHL92) v3.5.1	cmameB356
CmaCh18G003240	ClCG03G003690	Watermelon (Charleston Gray)	cmawcgB358
CmaCh18G003240	CSPI01G09460	Wild cucumber (PI 183967)	cmacpiB401
CmaCh18G003240	CmoCh18G002100	Cucurbita moschata (Rifu)	cmacmoB409
CmaCh18G003240	CmoCh13G008310	Cucurbita moschata (Rifu)	cmacmoB400
CmaCh18G003240	Lsi02G004970	Bottle gourd (USVL1VR-Ls)	cmalsiB373
CmaCh18G003240	Cp4.1LG09g09700	Cucurbita pepo (Zucchini)	cmacpeB414
CmaCh18G003240	Cp4.1LG20g03090	Cucurbita pepo (Zucchini)	cmacpeB440
CmaCh18G003240	MELO3C002354.2	Melon (DHL92) v3.6.1	cmamedB413
CmaCh18G003240	CsaV3_1G009570	Cucumber (Chinese Long) v3	cmacucB0474
CmaCh18G003240	Cla97C03G054830	Watermelon (97103) v2	cmawmbB417
CmaCh18G003240	Bhi08G001221	Wax gourd	cmawgoB0533
CmaCh18G003240	CsGy1G009510	Cucumber (Gy14) v2	cgybcmaB093
CmaCh18G003240	Carg07597	Silver-seed gourd	carcmaB1397
CmaCh18G003240	Carg06791	Silver-seed gourd	carcmaB0693

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmaCh18G003240	CmaCh13G007990	Cucurbita maxima (Rimu)	cmacmaB218

The following block(s) are covering this gene:

None