CmaCh18G002300 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh18G002300
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	BHLH transcription factor 1
Location	Cma_Chr18 : 1237799 .. 1240822 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTGGTGTTAGCATCGGTGGAACAGTTGCGGTATGCGATTCTTATCCGATTTTCCCTTTCGATTTTTCTCTCATATTCCCTTTTCCATTTCTTCAAATTTCCCATCGTTTCCTTCCCAATGTATATATTCTACCATTCGCCATGGAACTCGGCTGTATCTCTCGCGTTCTGTACTCAGAAATTCAGGGATTTTCAGTTCCGGCAATTGATCGCTGATGGAGTCGCCTGAAATTACCGACTGGGTATTTGATTACGCTCTGATTGAGGACTTTCCGGTCCCCGTCGGTGACCTACCTTCACTGGATCTTCCTGTTTGCACTTTGTCCTCTCGCGATTTCACTGCCTCCTTCAGGTTCTAATAGCTCATGAATCTCTTCTGAGTTTCGTTTTTTGATATTGTTCCTGGGATTTGTATGTCGTTGAAATGAATTGGTTGAGTTGTGGATTATCATCTGGGTTTGCTTGTGGATGTAGATTACATGATTGAACATAGGACTATGAAGTTATTTCATTAAGCAAAATTTGATTCACTAACGTCTTACATTGGCAAGGAGTTGTACCAGATTATGATGCCTACTCCAATCTAGCCTTCGTTCTTATAGATTTTTAACATGGTATCAAAGTAAAAAGCCTTGAATTCAAACTCTTTTTTTAATGTTTTTTCCTTCTCTGTTTTAGATTAGTAGTTCATGATATTAGAGGTAGGTTTCTAAGGGTTAGTGTAACTGCCCAAGCTCACTACTAGCAAATATTATCTTCTTTGGTTTTTTCCTTTCGGACTTCCCCTCAAGGTTTTTAAAAACCCGCTTGCTAGGGAGAGGTTTCCACATCCTTATAAAGAATGTTTCGTTTCTCTCTCCAACCGATGCGGGATCTCACAATCCACCCCCTTGGGGGCTAGCGTCCTCGCTGGCACAACACCCGGTGTATGGCTCTGATACCATTTGTAACCGTCCAAGCCCATTGTTAGCAGATATTGTCCTCTTTAGGCTTTCTCTTTCGGGCTTCTTCTCAAGGTTTTTAAAACATGTCTGTTAGGGAGACGTTTCCACACCCTTATAAGGAATGTTTTGTTCCCCTCTCCAACCTCTCCAACTGACATGGGATCTCACAATCCACCTCCCTTGTGGCCCAGCGCTGGAACACCACCTGGTGTATAGCTTTGATATCATTTGTAACAAGCCCACCGCTAGCAAATATTGTCCTCTTTGGGCTTTCCCTTTTAGACTTCCCCACAAGATTTTAAAACGCCTCTGCTAGGGAAAGGTTTCCACACCCTTATAAGGAATGTTTCGTTCCCCTCTCCAACCGACGTGGGATCTCACAATTCACACCCCTTGGGGGCCTAGTGTCCTCGCTGGCACATCGCTCTGTGTATGGCTCTGATACCATTTCTACCCGTTCAAGCCCACCACTAGCATATATTGTCTTCTTTAGGCTTTCCCTCTTGAGCTTCTCCTCAAGGTTTTTAAAACATGTCTACTAGGGAGAGGTTTCCACACCCTTATAAGAAATGTTTTGTTCTCCTCTCCAACCGACTTGGGATCTCACGGTTAGACTCAATGCGAACATTAGAGCCTATTCATGAGGAGTGTCGTGGAATGTTTATATGTTTTATTTTCTTTATATGACAGATGAGATGCCATTTTTTATAAAAGATCTCATTCGTACCGTTGTTAGTGTTTTAAGGGAAGACTTTGATGAGGCACATGGAAAGCTAAACGATATAAAAGAATCTGGGTCTAGGAAAAGGTGAGCAATTATTAGTTCCCAAGTTGAGTATCTGCACTATGAGGAGGATTAGCATATCATTGTTTATGTTCTAATGCTGTGGCTATGAATTTGAGCATATTGGATATGCCCTTACAATAACATCATCGGTTATGTTCTAATGCTGTGGCTATCAACTTTAGCATATTGGATATGCCCTTACAATAGCATGGTAGTGATCTTACTGTTTACAGGATGAGCCCTGGATCAAGTGCATCTTTGTCCAAAGCACATAAAGAGAAAGTGCGGAGAAATAGACTAAATGACAGGCATCTCGATTCATTACATTCATCTTTTTCGCCATTCCCGTCTCTGCTCCGCTCCTCCCCCGCCTCATATTTTGTGTTTGCTTGCTGATTAAAGGTTTCTGGAGTTGAATTCCATCCTCAATCATGGAACGTCTCCCAAAATTGTCAAGTCTGTTATTTTGGGTGATGCAGTTCGAATGATCTTGCAGCTAAGAGATGAAGCTCAGAAGCTGGAGGAGTCCAATGAGAATTTTCTGGAGAAGATCAATGAAATGAAGGTAGATTATGTGGTTTTGTACTCGTCGATGTTCGGTTTGATCTTCCATCGATGTTTGATTCTATTTCTTCTTTGTTCAGGCTGAAAAGAATGAACTACGAGACGAGAAACAGAGGCTAAAAGAAGCAAAAGACAACCTTAAACAGAAAATGAAAACCTTCATTACTCAACCAAGTTTCCTGCCTCACCCTCCTGCATTTTCTGCTCCAAATCATGTTGTTGGGGCGAAGCTCATACCTGTGATTGGATATCCAGGAGTATCCATGTGGAAGTTTATGCCTCCGGGCACTATGGATACGTCGCAAGACCACGTTCTCCGGCCACCAGTCGCCTGACTTGGTAGAGTTCTTCCATTTTCACTGGCTTTGCTTTTACATGCGAGGATTCCTATGTTGGTTTTTCTGTAGGGCTGACATGGTTCTGTTGTCTGTTAGATTTTCATGATTGAATTGGCTTGAATGTATGTTTTGTTATAGAAATTCCGCTGATCAAAATCAATATAGTCTACTCCCTAAGTTCTTAGCCTTACTGTTTTTCAGCAGAAGACGAGTTTGCTCTGAGAGAAACAATCGTCTTTAGAAGATTATAGAGTTTCAACTAATAGAACTATGCTCGGGTTGACTGATTTTTCTTTAGATATCCATTGTTCGGCATAAGATTTGAAGGATTGACAATGAAATTGAGTTATTCTCTAGCCAATACAGGACTTCAACAATCCTCAACACTCGAC

mRNA sequence

GTGGTGTTAGCATCGGTGGAACAGTTGCGGTATGCGATTCTTATCCGATTTTCCCTTTCGATTTTTCTCTCATATTCCCTTTTCCATTTCTTCAAATTTCCCATCGTTTCCTTCCCAATGTATATATTCTACCATTCGCCATGGAACTCGGCTGTATCTCTCGCGTTCTGTACTCAGAAATTCAGGGATTTTCAGTTCCGGCAATTGATCGCTGATGGAGTCGCCTGAAATTACCGACTGGGTATTTGATTACGCTCTGATTGAGGACTTTCCGGTCCCCGTCGGTGACCTACCTTCACTGGATCTTCCTGTTTGCACTTTGTCCTCTCGCGATTTCACTGCCTCCTTCAGGATGAGCCCTGGATCAAGTGCATCTTTGTCCAAAGCACATAAAGAGAAAGTGCGGAGAAATAGACTAAATGACAGGTTTCTGGAGTTGAATTCCATCCTCAATCATGGAACGTCTCCCAAAATTGTCAAGTCTGTTATTTTGGGTGATGCAGTTCGAATGATCTTGCAGCTAAGAGATGAAGCTCAGAAGCTGGAGGAGTCCAATGAGAATTTTCTGGAGAAGATCAATGAAATGAAGGCTGAAAAGAATGAACTACGAGACGAGAAACAGAGGCTAAAAGAAGCAAAAGACAACCTTAAACAGAAAATGAAAACCTTCATTACTCAACCAAGTTTCCTGCCTCACCCTCCTGCATTTTCTGCTCCAAATCATGTTGTTGGGGCGAAGCTCATACCTGTGATTGGATATCCAGGAGTATCCATGTGGAAGTTTATGCCTCCGGGCACTATGGATACGTCGCAAGACCACGTTCTCCGGCCACCAGTCGCCTGACTTGGTAGAGTTCTTCCATTTTCACTGGCTTTGCTTTTACATGCGAGGATTCCTATGTTGGTTTTTCTGTAGGGCTGACATGGTTCTGTTGTCTGTTAGATTTTCATGATTGAATTGGCTTGAATGTATGTTTTGTTATAGAAATTCCGCTGATCAAAATCAATATAGTCTACTCCCTAAGTTCTTAGCCTTACTGTTTTTCAGCAGAAGACGAGTTTGCTCTGAGAGAAACAATCGTCTTTAGAAGATTATAGAGTTTCAACTAATAGAACTATGCTCGGGTTGACTGATTTTTCTTTAGATATCCATTGTTCGGCATAAGATTTGAAGGATTGACAATGAAATTGAGTTATTCTCTAGCCAATACAGGACTTCAACAATCCTCAACACTCGAC

Coding sequence (CDS)

ATGGAGTCGCCTGAAATTACCGACTGGGTATTTGATTACGCTCTGATTGAGGACTTTCCGGTCCCCGTCGGTGACCTACCTTCACTGGATCTTCCTGTTTGCACTTTGTCCTCTCGCGATTTCACTGCCTCCTTCAGGATGAGCCCTGGATCAAGTGCATCTTTGTCCAAAGCACATAAAGAGAAAGTGCGGAGAAATAGACTAAATGACAGGTTTCTGGAGTTGAATTCCATCCTCAATCATGGAACGTCTCCCAAAATTGTCAAGTCTGTTATTTTGGGTGATGCAGTTCGAATGATCTTGCAGCTAAGAGATGAAGCTCAGAAGCTGGAGGAGTCCAATGAGAATTTTCTGGAGAAGATCAATGAAATGAAGGCTGAAAAGAATGAACTACGAGACGAGAAACAGAGGCTAAAAGAAGCAAAAGACAACCTTAAACAGAAAATGAAAACCTTCATTACTCAACCAAGTTTCCTGCCTCACCCTCCTGCATTTTCTGCTCCAAATCATGTTGTTGGGGCGAAGCTCATACCTGTGATTGGATATCCAGGAGTATCCATGTGGAAGTTTATGCCTCCGGGCACTATGGATACGTCGCAAGACCACGTTCTCCGGCCACCAGTCGCCTGA

Protein sequence

MESPEITDWVFDYALIEDFPVPVGDLPSLDLPVCTLSSRDFTASFRMSPGSSASLSKAHKEKVRRNRLNDRFLELNSILNHGTSPKIVKSVILGDAVRMILQLRDEAQKLEESNENFLEKINEMKAEKNELRDEKQRLKEAKDNLKQKMKTFITQPSFLPHPPAFSAPNHVVGAKLIPVIGYPGVSMWKFMPPGTMDTSQDHVLRPPVA

Homology

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BLAST of CmaCh18G002300 vs. Swiss-Prot
Match: ILR3_ARATH (Transcription factor ILR3 OS=Arabidopsis thaliana GN=ILR3 PE=1 SV=1)

HSP 1 Score: 179.5 bits (454), Expect = 3.8e-44
Identity = 99/165 (60.00%), Postives = 123/165 (74.55%), Query Frame = 1


Query: 51  SSASLSKAHKEKVRRNRLNDRFLELNSILNHGTSPKIVKSVILGDAVRMILQLRDEAQKL 110
           SSA+ SKA +EK RR+RLND+F+EL +IL  G  PK  K+ IL DAVRM+ QLR EAQKL
Sbjct: 70  SSATSSKACREKQRRDRLNDKFMELGAILEPGNPPKTDKAAILVDAVRMVTQLRGEAQKL 129

Query: 111 EESNENFLEKINEMKAEKNELRDEKQRLKEAKDNLKQKMKTF-ITQPSFLPHPP----AF 170
           ++SN +  +KI E+K EKNELRDEKQRLK  K+ L+Q++K     QPSF P PP    AF
Sbjct: 130 KDSNSSLQDKIKELKTEKNELRDEKQRLKTEKEKLEQQLKAMNAPQPSFFPAPPMMPTAF 189

Query: 171 -SAPNHVVGAKLIPVIGYPGVSMWKFMPPGTMDTSQDHVLRPPVA 210
            SA     G K++P+I YPGV+MW+FMPP ++DTSQDHVLRPPVA
Sbjct: 190 ASAQGQAPGNKMVPIISYPGVAMWQFMPPASVDTSQDHVLRPPVA 234

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BLAST of CmaCh18G002300 vs. Swiss-Prot
Match: BH115_ARATH (Transcription factor bHLH115 OS=Arabidopsis thaliana GN=BHLH115 PE=2 SV=1)

HSP 1 Score: 172.2 bits (435), Expect = 6.1e-42
Identity = 105/227 (46.26%), Postives = 139/227 (61.23%), Query Frame = 1


Query: 1   MESPEITDWVFDYALIED--------FPVPVGDLPSLDLPV----CTLSSRDFTASFRM- 60
           M SPE T+W+ DY LIE         FP  +    ++ + V    C        +S +  
Sbjct: 1   MVSPENTNWLSDYPLIEGAFSDQNPTFPWQIDGSATVSVEVDGFLCDADVIKEPSSRKRI 60

Query: 61  -SPGSSASLSKAHKEKVRRNRLNDRFLELNSILNHGTSPKIVKSVILGDAVRMILQLRDE 120
            +   + S SKA +EK RR+RLND+F EL+S+L  G +PK  K  I+ DA+RM+ Q RDE
Sbjct: 61  KTESCTGSNSKACREKQRRDRLNDKFTELSSVLEPGRTPKTDKVAIINDAIRMVNQARDE 120

Query: 121 AQKLEESNENFLEKINEMKAEKNELRDEKQRLKEAKDNLKQKMKTFITQPS----FLPHP 180
           AQKL++ N +  EKI E+K EKNELRDEKQ+LK  K+ + Q++K   TQP     FLP+P
Sbjct: 121 AQKLKDLNSSLQEKIKELKDEKNELRDEKQKLKVEKERIDQQLKAIKTQPQPQPCFLPNP 180

Query: 181 PAFSAPNHVVGAKLIPVIGYPGVSMWKFMPPGTMDTSQDHVLRPPVA 210
              S      G+KL+P   YPG +MW+FMPP  +DTSQDHVLRPPVA
Sbjct: 181 QTLSQA-QAPGSKLVPFTTYPGFAMWQFMPPAAVDTSQDHVLRPPVA 226

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BLAST of CmaCh18G002300 vs. Swiss-Prot
Match: BH104_ARATH (Transcription factor bHLH104 OS=Arabidopsis thaliana GN=BHLH104 PE=2 SV=1)

HSP 1 Score: 127.5 bits (319), Expect = 1.7e-28
Identity = 78/156 (50.00%), Postives = 108/156 (69.23%), Query Frame = 1


Query: 56  SKAHKEKVRRNRLNDRFLELNSILNHGTSPKIVKSVILGDAVRMILQLRDEAQKLEESNE 115
           +KA +E++RR +LN+RF++L+S+L  G +PK  K  IL DA+R++ QLRDEA KLEE+N+
Sbjct: 134 TKACRERLRREKLNERFMDLSSVLEPGRTPKTDKPAILDDAIRILNQLRDEALKLEETNQ 193

Query: 116 NFLEKINEMKAEKNELRDEKQRLKEAKDNLKQKMKTFITQPS--FLPHPPAFSAPNHVVG 175
             LE+I  +KAEKNELR+EK  LK  K+  +Q++K+ +T PS  F+PH PA  A NH   
Sbjct: 194 KLLEEIKSLKAEKNELREEKLVLKADKEKTEQQLKS-MTAPSSGFIPHIPA--AFNHNKM 253

Query: 176 AKLIPVIGYPGVSMWKFMPPGTMDTSQDHVLRPPVA 210
           A + P  GY  + MW +MP    DTS+D  LRPP A
Sbjct: 254 A-VYPSYGY--MPMWHYMPQSVRDTSRDQELRPPAA 283

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BLAST of CmaCh18G002300 vs. Swiss-Prot
Match: BH034_ARATH (Transcription factor bHLH34 OS=Arabidopsis thaliana GN=BHLH34 PE=2 SV=1)

HSP 1 Score: 122.1 bits (305), Expect = 7.3e-27
Identity = 71/159 (44.65%), Postives = 104/159 (65.41%), Query Frame = 1


Query: 56  SKAHKEKVRRNRLNDRFLELNSILNHGTSPKIVKSVILGDAVRMILQLRDEAQKLEESNE 115
           +KA +EK+RR +LND+F++L+S+L  G +PK  KS IL DA+R++ QLR EA +L+E+N+
Sbjct: 166 TKACREKLRREKLNDKFMDLSSVLEPGRTPKTDKSAILDDAIRVVNQLRGEAHELQETNQ 225

Query: 116 NFLEKINEMKAEKNELRDEKQRLKEAKDNLKQKMKTFIT-QPSFLP--HPPAFSAPNHVV 175
             LE+I  +KA+KNELR+EK  LK  K+ ++Q++K+ +   P F+P  HP AF +    V
Sbjct: 226 KLLEEIKSLKADKNELREEKLVLKAEKEKMEQQLKSMVVPSPGFMPSQHPAAFHSHKMAV 285

Query: 176 GAKLIPVIGY--PGVSMWKFMPPGTMDTSQDHVLRPPVA 210
                   GY  P + MW  +PP   DTS+D    PPVA
Sbjct: 286 AYP----YGYYPPNMPMWSPLPPADRDTSRDLKNLPPVA 320

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BLAST of CmaCh18G002300 vs. Swiss-Prot
Match: BH121_ARATH (Transcription factor bHLH121 OS=Arabidopsis thaliana GN=BHLH121 PE=2 SV=1)

HSP 1 Score: 60.5 bits (145), Expect = 2.6e-08
Identity = 54/172 (31.40%), Postives = 85/172 (49.42%), Query Frame = 1


Query: 32  PVCTLSSRDFTASFRMSPG-------SSASLSKAHKEKVRRNRLNDRFLELNSILNHGTS 91
           P C L +   + S  + P        S+    KA +EK+RR +LN+ F+EL ++L+    
Sbjct: 31  PPCLLLAHRISPSPSILPAEEEVMDVSARKSQKAGREKLRREKLNEHFVELGNVLDP-ER 90

Query: 92  PKIVKSVILGDAVRMILQLRDEAQKLEESNENFLEKINEMKAEKNELRDEKQRLKEAKDN 151
           PK  K+ IL D V+++ +L  E  KL+       ++  E+  EKN+LR+EK  LK   +N
Sbjct: 91  PKNDKATILTDTVQLLKELTSEVNKLKSEYTALTDESRELTQEKNDLREEKTSLKSDIEN 150

Query: 152 LKQKMKTFITQPSFLPHPPAFSAPNHVVGAKLIPVIGYPGVSMWKFMPPGTM 197
           L  + +  +   S     P  +A +H V     P   YP   M   MPPG++
Sbjct: 151 LNLQYQQRLRSMS-----PWGAAMDHTVMMAPPPSFPYP---MPIAMPPGSI 193

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BLAST of CmaCh18G002300 vs. TrEMBL
Match: A0A0A0LX71_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G065960 PE=4 SV=1)

HSP 1 Score: 310.8 bits (795), Expect = 1.2e-81
Identity = 168/235 (71.49%), Postives = 187/235 (79.57%), Query Frame = 1


Query: 1   MESPEITDWVFDYALIEDFPVPVGDLPSLDLPVCTLSSRDFTASFR-------------- 60
           M SPE+TDWVFDY +IE+ PVP GDLPSLDLP  TL S DFTASFR              
Sbjct: 1   MGSPELTDWVFDYGVIENIPVPGGDLPSLDLPSFTLPSCDFTASFREDFDEPLGMEEDVK 60

Query: 61  -------MSPGSSASL-SKAHKEKVRRNRLNDRFLELNSILNHGTSPKIVKSVILGDAVR 120
                  MS GSS +  SKA KEK+RR++LNDRFLELNSILNHG  PKI KS ILGDAVR
Sbjct: 61  ESRSRKRMSSGSSNAFESKARKEKIRRDKLNDRFLELNSILNHGRPPKIDKSAILGDAVR 120

Query: 121 MILQLRDEAQKLEESNENFLEKINEMKAEKNELRDEKQRLKEAKDNLKQKMKTFITQPSF 180
           MI+QLRDEAQKL+ESNE+ LEKINEMKAEKNELRDEKQRLKEAKD+L++KMK F TQP+F
Sbjct: 121 MIIQLRDEAQKLKESNESSLEKINEMKAEKNELRDEKQRLKEAKDSLEKKMKGFNTQPTF 180

Query: 181 LPHPPA----FSAPNHVVGAKLIPVIGYPGVSMWKFMPPGTMDTSQDHVLRPPVA 210
           LPHPPA    FS+PN +VG KL+PVIGYPGVSMW+FMPPG +DTSQDHVLRPPVA
Sbjct: 181 LPHPPAIPAGFSSPNQIVGGKLVPVIGYPGVSMWQFMPPGAIDTSQDHVLRPPVA 235

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BLAST of CmaCh18G002300 vs. TrEMBL
Match: A0A061GF70_THECC (DNA binding protein, putative isoform 2 OS=Theobroma cacao GN=TCM_030082 PE=4 SV=1)

HSP 1 Score: 248.1 bits (632), Expect = 9.8e-63
Identity = 138/218 (63.30%), Postives = 163/218 (74.77%), Query Frame = 1


Query: 1   MESPEITDWVFD-YALIEDFPVPVGDLPSLDLPVCTLSSRDFTAS---FRMSPGS-SASL 60
           + S   + W+FD Y L+ED PVP GDLPSLD      SS+  T S    R   GS SAS 
Sbjct: 12  VSSENPSGWIFDDYGLLEDIPVPGGDLPSLDPAAPIWSSQSLTCSTPPLRARSGSCSASG 71

Query: 61  SKAHKEKVRRNRLNDRFLELNSILNHGTSPKIVKSVILGDAVRMILQLRDEAQKLEESNE 120
           SKA +EK+RR+RLNDRFLEL SIL+ G   K+ K+VIL DAVRM+ QLRDEAQKL ESNE
Sbjct: 72  SKACREKMRRDRLNDRFLELGSILDPGRPLKVDKAVILVDAVRMVTQLRDEAQKLRESNE 131

Query: 121 NFLEKINEMKAEKNELRDEKQRLKEAKDNLKQKMKTFITQPSFLPHPPA----FSAPNHV 180
           +  EKINE+KAEKNELRDEKQRLK  K+NL+Q++K   TQP FLPHPPA    FS P  V
Sbjct: 132 SLQEKINELKAEKNELRDEKQRLKTEKENLEQQVKALGTQPGFLPHPPAIPTPFSTPGQV 191

Query: 181 VGAKLIPVIGYPGVSMWKFMPPGTMDTSQDHVLRPPVA 210
           VG KL+P +GYPGVSMW+F+PP ++DTSQDH+LRPPVA
Sbjct: 192 VGGKLVPFVGYPGVSMWQFLPPASVDTSQDHILRPPVA 229

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BLAST of CmaCh18G002300 vs. TrEMBL
Match: A0A067GJL0_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g026702mg PE=4 SV=1)

HSP 1 Score: 236.5 bits (602), Expect = 2.9e-59
Identity = 134/235 (57.02%), Postives = 165/235 (70.21%), Query Frame = 1


Query: 1   MESPEITDWVFDYALIEDFPVPVGDLPSLDLPVCTLSSR--------DFTASF------- 60
           M SP  ++W+FD  L++D  V  GDLPSLD P    SS         +F  SF       
Sbjct: 1   MSSPYNSNWIFDCGLLDDIGVSGGDLPSLDPPEVLWSSSTSNPPLSAEFNDSFGNLDAFK 60

Query: 61  ------RMSPGS-SASLSKAHKEKVRRNRLNDRFLELNSILNHGTSPKIVKSVILGDAVR 120
                 R+  GS SAS SKA +EK+RR+RLNDRF+EL SIL+ G  PK+ K+V+L DAV+
Sbjct: 61  ETGSRKRVRSGSCSASGSKACREKMRRDRLNDRFMELASILDPGRPPKMDKTVLLADAVQ 120

Query: 121 MILQLRDEAQKLEESNENFLEKINEMKAEKNELRDEKQRLKEAKDNLKQKMKTFITQPSF 180
           M+ QLRDEAQKL+ SNE  L KINE+K EKNELRDEKQRLK  K+NL++++K   +QP+F
Sbjct: 121 MVTQLRDEAQKLKVSNEKLLGKINELKCEKNELRDEKQRLKNEKENLERQVKALSSQPAF 180

Query: 181 LPHPP----AFSAPNHVVGAKLIPVIGYPGVSMWKFMPPGTMDTSQDHVLRPPVA 210
           LPHPP     FSAP  VVG KL+P++GYPGVSMW+FMPP  +DTSQDHVLRPPVA
Sbjct: 181 LPHPPPVPAPFSAPGQVVGGKLVPLVGYPGVSMWQFMPPAAVDTSQDHVLRPPVA 235

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BLAST of CmaCh18G002300 vs. TrEMBL
Match: V4UJ84_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10016511mg PE=4 SV=1)

HSP 1 Score: 235.7 bits (600), Expect = 5.0e-59
Identity = 134/235 (57.02%), Postives = 165/235 (70.21%), Query Frame = 1


Query: 1   MESPEITDWVFDYALIEDFPVPVGDLPSLDLPVCTLSSR--------DFTASF------- 60
           M SP  ++W+FD  L++   V  GDLPSLD P    SS         +F  SF       
Sbjct: 1   MSSPYNSNWIFDCGLLDGIGVSGGDLPSLDPPEVLWSSSTSNPPLSAEFDDSFGNLDAFK 60

Query: 61  ------RMSPGS-SASLSKAHKEKVRRNRLNDRFLELNSILNHGTSPKIVKSVILGDAVR 120
                 R+  GS SAS SKA +EK+RR+RLNDRF+EL SIL+ G  PK+ K+V+L DAV+
Sbjct: 61  ETGSRKRVRSGSCSASGSKACREKMRRDRLNDRFMELASILDPGRPPKMDKTVLLADAVQ 120

Query: 121 MILQLRDEAQKLEESNENFLEKINEMKAEKNELRDEKQRLKEAKDNLKQKMKTFITQPSF 180
           M+ QLRDEAQKL+ SNEN L KINE+K EKNELRDEKQRLK  K+NL++++K   +QP+F
Sbjct: 121 MVTQLRDEAQKLKVSNENLLGKINELKCEKNELRDEKQRLKNEKENLERQVKALSSQPAF 180

Query: 181 LPHPP----AFSAPNHVVGAKLIPVIGYPGVSMWKFMPPGTMDTSQDHVLRPPVA 210
           LPHPP     FSAP  VVG KL+P++GYPGVSMW+FMPP  +DTSQDHVLRPPVA
Sbjct: 181 LPHPPPVPAPFSAPGQVVGGKLVPLVGYPGVSMWQFMPPAAVDTSQDHVLRPPVA 235

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BLAST of CmaCh18G002300 vs. TrEMBL
Match: A0A0U2I0R6_9ROSA (BHLH transcription factor OS=Prunus pseudocerasus PE=2 SV=1)

HSP 1 Score: 234.2 bits (596), Expect = 1.5e-58
Identity = 132/234 (56.41%), Postives = 161/234 (68.80%), Query Frame = 1


Query: 4   PEITDWVFDYALIEDFPVPVGDLPSLDLPVCTLSSRDFTA------SFRMSPGSSASL-- 63
           P+  +WVFDY +IED PVP GDLP LDLP  T  S  F A       F  S G+S S+  
Sbjct: 5   PQNHNWVFDYGVIEDIPVPGGDLPPLDLPGFTWPSNSFVAPAAPSVDFDDSFGNSDSIKE 64

Query: 64  ----------------SKAHKEKVRRNRLNDRFLELNSILNHGTSPKIVKSVILGDAVRM 123
                           SKA +EK+RR+RLNDRFLEL+S+L  G  PK  K+ ILGDAVR+
Sbjct: 65  SGFRKRVRSGSCNVTGSKACREKMRRDRLNDRFLELSSMLEPGRPPKTDKAAILGDAVRV 124

Query: 124 ILQLRDEAQKLEESNENFLEKINEMKAEKNELRDEKQRLKEAKDNLKQKMKTFITQPSFL 183
           + QLR EAQ+L++SN +  EKINE+KAEKNELR+EKQRLK  K+N+++++K   TQP FL
Sbjct: 125 VNQLRGEAQQLKDSNGHLQEKINELKAEKNELRNEKQRLKTEKENIERQIKALNTQPGFL 184

Query: 184 PHPPA----FSAPNHVVGAKLIPVIGYPGVSMWKFMPPGTMDTSQDHVLRPPVA 210
           PHP A    F AP  VVG KL+P +GYPGVSMW+FMPP  +DTSQDHVLRPPVA
Sbjct: 185 PHPAAIPGPFPAPGQVVGGKLMPFVGYPGVSMWQFMPPAAVDTSQDHVLRPPVA 238

[Close]

BLAST of CmaCh18G002300 vs. TAIR10
Match: AT5G54680.1 (AT5G54680.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 179.5 bits (454), Expect = 2.2e-45
Identity = 99/165 (60.00%), Postives = 123/165 (74.55%), Query Frame = 1


Query: 51  SSASLSKAHKEKVRRNRLNDRFLELNSILNHGTSPKIVKSVILGDAVRMILQLRDEAQKL 110
           SSA+ SKA +EK RR+RLND+F+EL +IL  G  PK  K+ IL DAVRM+ QLR EAQKL
Sbjct: 70  SSATSSKACREKQRRDRLNDKFMELGAILEPGNPPKTDKAAILVDAVRMVTQLRGEAQKL 129

Query: 111 EESNENFLEKINEMKAEKNELRDEKQRLKEAKDNLKQKMKTF-ITQPSFLPHPP----AF 170
           ++SN +  +KI E+K EKNELRDEKQRLK  K+ L+Q++K     QPSF P PP    AF
Sbjct: 130 KDSNSSLQDKIKELKTEKNELRDEKQRLKTEKEKLEQQLKAMNAPQPSFFPAPPMMPTAF 189

Query: 171 -SAPNHVVGAKLIPVIGYPGVSMWKFMPPGTMDTSQDHVLRPPVA 210
            SA     G K++P+I YPGV+MW+FMPP ++DTSQDHVLRPPVA
Sbjct: 190 ASAQGQAPGNKMVPIISYPGVAMWQFMPPASVDTSQDHVLRPPVA 234

[Close]

BLAST of CmaCh18G002300 vs. TAIR10
Match: AT1G51070.2 (AT1G51070.2 basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 164.1 bits (414), Expect = 9.4e-41
Identity = 89/162 (54.94%), Postives = 114/162 (70.37%), Query Frame = 1


Query: 52  SASLSKAHKEKVRRNRLNDRFLELNSILNHGTSPKIVKSVILGDAVRMILQLRDEAQKLE 111
           + S SKA +EK RR+RLND+F EL+S+L  G +PK  K  I+ DA+RM+ Q RDEAQKL+
Sbjct: 132 TGSNSKACREKQRRDRLNDKFTELSSVLEPGRTPKTDKVAIINDAIRMVNQARDEAQKLK 191

Query: 112 ESNENFLEKINEMKAEKNELRDEKQRLKEAKDNLKQKMKTFITQPS----FLPHPPAFSA 171
           + N +  EKI E+K EKNELRDEKQ+LK  K+ + Q++K   TQP     FLP+P   S 
Sbjct: 192 DLNSSLQEKIKELKDEKNELRDEKQKLKVEKERIDQQLKAIKTQPQPQPCFLPNPQTLSQ 251

Query: 172 PNHVVGAKLIPVIGYPGVSMWKFMPPGTMDTSQDHVLRPPVA 210
                G+KL+P   YPG +MW+FMPP  +DTSQDHVLRPPVA
Sbjct: 252 A-QAPGSKLVPFTTYPGFAMWQFMPPAAVDTSQDHVLRPPVA 292

[Close]

BLAST of CmaCh18G002300 vs. TAIR10
Match: AT4G14410.1 (AT4G14410.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 127.5 bits (319), Expect = 9.7e-30
Identity = 78/156 (50.00%), Postives = 108/156 (69.23%), Query Frame = 1


Query: 56  SKAHKEKVRRNRLNDRFLELNSILNHGTSPKIVKSVILGDAVRMILQLRDEAQKLEESNE 115
           +KA +E++RR +LN+RF++L+S+L  G +PK  K  IL DA+R++ QLRDEA KLEE+N+
Sbjct: 134 TKACRERLRREKLNERFMDLSSVLEPGRTPKTDKPAILDDAIRILNQLRDEALKLEETNQ 193

Query: 116 NFLEKINEMKAEKNELRDEKQRLKEAKDNLKQKMKTFITQPS--FLPHPPAFSAPNHVVG 175
             LE+I  +KAEKNELR+EK  LK  K+  +Q++K+ +T PS  F+PH PA  A NH   
Sbjct: 194 KLLEEIKSLKAEKNELREEKLVLKADKEKTEQQLKS-MTAPSSGFIPHIPA--AFNHNKM 253

Query: 176 AKLIPVIGYPGVSMWKFMPPGTMDTSQDHVLRPPVA 210
           A + P  GY  + MW +MP    DTS+D  LRPP A
Sbjct: 254 A-VYPSYGY--MPMWHYMPQSVRDTSRDQELRPPAA 283

[Close]

BLAST of CmaCh18G002300 vs. TAIR10
Match: AT3G23210.1 (AT3G23210.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 122.1 bits (305), Expect = 4.1e-28
Identity = 71/159 (44.65%), Postives = 104/159 (65.41%), Query Frame = 1


Query: 56  SKAHKEKVRRNRLNDRFLELNSILNHGTSPKIVKSVILGDAVRMILQLRDEAQKLEESNE 115
           +KA +EK+RR +LND+F++L+S+L  G +PK  KS IL DA+R++ QLR EA +L+E+N+
Sbjct: 166 TKACREKLRREKLNDKFMDLSSVLEPGRTPKTDKSAILDDAIRVVNQLRGEAHELQETNQ 225

Query: 116 NFLEKINEMKAEKNELRDEKQRLKEAKDNLKQKMKTFIT-QPSFLP--HPPAFSAPNHVV 175
             LE+I  +KA+KNELR+EK  LK  K+ ++Q++K+ +   P F+P  HP AF +    V
Sbjct: 226 KLLEEIKSLKADKNELREEKLVLKAEKEKMEQQLKSMVVPSPGFMPSQHPAAFHSHKMAV 285

Query: 176 GAKLIPVIGY--PGVSMWKFMPPGTMDTSQDHVLRPPVA 210
                   GY  P + MW  +PP   DTS+D    PPVA
Sbjct: 286 AYP----YGYYPPNMPMWSPLPPADRDTSRDLKNLPPVA 320

[Close]

BLAST of CmaCh18G002300 vs. TAIR10
Match: AT3G19860.2 (AT3G19860.2 basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 60.5 bits (145), Expect = 1.5e-09
Identity = 54/172 (31.40%), Postives = 85/172 (49.42%), Query Frame = 1


Query: 32  PVCTLSSRDFTASFRMSPG-------SSASLSKAHKEKVRRNRLNDRFLELNSILNHGTS 91
           P C L +   + S  + P        S+    KA +EK+RR +LN+ F+EL ++L+    
Sbjct: 31  PPCLLLAHRISPSPSILPAEEEVMDVSARKSQKAGREKLRREKLNEHFVELGNVLDP-ER 90

Query: 92  PKIVKSVILGDAVRMILQLRDEAQKLEESNENFLEKINEMKAEKNELRDEKQRLKEAKDN 151
           PK  K+ IL D V+++ +L  E  KL+       ++  E+  EKN+LR+EK  LK   +N
Sbjct: 91  PKNDKATILTDTVQLLKELTSEVNKLKSEYTALTDESRELTQEKNDLREEKTSLKSDIEN 150

Query: 152 LKQKMKTFITQPSFLPHPPAFSAPNHVVGAKLIPVIGYPGVSMWKFMPPGTM 197
           L  + +  +   S     P  +A +H V     P   YP   M   MPPG++
Sbjct: 151 LNLQYQQRLRSMS-----PWGAAMDHTVMMAPPPSFPYP---MPIAMPPGSI 193

[Close]

BLAST of CmaCh18G002300 vs. NCBI nr
Match: gi|449454698|ref|XP_004145091.1| (PREDICTED: transcription factor ILR3-like [Cucumis sativus])

HSP 1 Score: 310.8 bits (795), Expect = 1.8e-81
Identity = 168/235 (71.49%), Postives = 187/235 (79.57%), Query Frame = 1


Query: 1   MESPEITDWVFDYALIEDFPVPVGDLPSLDLPVCTLSSRDFTASFR-------------- 60
           M SPE+TDWVFDY +IE+ PVP GDLPSLDLP  TL S DFTASFR              
Sbjct: 1   MGSPELTDWVFDYGVIENIPVPGGDLPSLDLPSFTLPSCDFTASFREDFDEPLGMEEDVK 60

Query: 61  -------MSPGSSASL-SKAHKEKVRRNRLNDRFLELNSILNHGTSPKIVKSVILGDAVR 120
                  MS GSS +  SKA KEK+RR++LNDRFLELNSILNHG  PKI KS ILGDAVR
Sbjct: 61  ESRSRKRMSSGSSNAFESKARKEKIRRDKLNDRFLELNSILNHGRPPKIDKSAILGDAVR 120

Query: 121 MILQLRDEAQKLEESNENFLEKINEMKAEKNELRDEKQRLKEAKDNLKQKMKTFITQPSF 180
           MI+QLRDEAQKL+ESNE+ LEKINEMKAEKNELRDEKQRLKEAKD+L++KMK F TQP+F
Sbjct: 121 MIIQLRDEAQKLKESNESSLEKINEMKAEKNELRDEKQRLKEAKDSLEKKMKGFNTQPTF 180

Query: 181 LPHPPA----FSAPNHVVGAKLIPVIGYPGVSMWKFMPPGTMDTSQDHVLRPPVA 210
           LPHPPA    FS+PN +VG KL+PVIGYPGVSMW+FMPPG +DTSQDHVLRPPVA
Sbjct: 181 LPHPPAIPAGFSSPNQIVGGKLVPVIGYPGVSMWQFMPPGAIDTSQDHVLRPPVA 235

[Close]

BLAST of CmaCh18G002300 vs. NCBI nr
Match: gi|659067851|ref|XP_008441610.1| (PREDICTED: transcription factor ILR3-like [Cucumis melo])

HSP 1 Score: 310.5 bits (794), Expect = 2.3e-81
Identity = 170/235 (72.34%), Postives = 186/235 (79.15%), Query Frame = 1


Query: 1   MESPEITDWVFDYALIEDFPVPVGDLPSLDLPVCTLSSRDFTASFR-------------- 60
           M SPEITDWVFDY +IEDFPVP GDLPSLDLP  TL   DFTASFR              
Sbjct: 1   MGSPEITDWVFDYGVIEDFPVPGGDLPSLDLPSFTLPC-DFTASFRADFDEPLGMAEDVK 60

Query: 61  -------MSPGSSASL-SKAHKEKVRRNRLNDRFLELNSILNHGTSPKIVKSVILGDAVR 120
                  MS GSS +  SKA KEK+RR++LNDRFLELNSILNHG  PK+ KS ILGDAVR
Sbjct: 61  ESGSRKRMSSGSSNAFESKARKEKMRRDKLNDRFLELNSILNHGRPPKLDKSAILGDAVR 120

Query: 121 MILQLRDEAQKLEESNENFLEKINEMKAEKNELRDEKQRLKEAKDNLKQKMKTFITQPSF 180
           MI+QLRDEAQKL+ESNE+ LEKINEMKAEKNELRDEKQRLKEAKD L++KMK F TQPSF
Sbjct: 121 MIIQLRDEAQKLKESNESSLEKINEMKAEKNELRDEKQRLKEAKDGLEKKMKAFNTQPSF 180

Query: 181 LPHPPA----FSAPNHVVGAKLIPVIGYPGVSMWKFMPPGTMDTSQDHVLRPPVA 210
           LPHPPA    FS+PN +VG KL+PVIGYPGVSMW+FMPPG +DTSQDHVLRPPVA
Sbjct: 181 LPHPPAIPPGFSSPNQIVGGKLVPVIGYPGVSMWQFMPPGAIDTSQDHVLRPPVA 234

[Close]

BLAST of CmaCh18G002300 vs. NCBI nr
Match: gi|590625564|ref|XP_007025918.1| (DNA binding protein, putative isoform 2 [Theobroma cacao])

HSP 1 Score: 248.1 bits (632), Expect = 1.4e-62
Identity = 138/218 (63.30%), Postives = 163/218 (74.77%), Query Frame = 1


Query: 1   MESPEITDWVFD-YALIEDFPVPVGDLPSLDLPVCTLSSRDFTAS---FRMSPGS-SASL 60
           + S   + W+FD Y L+ED PVP GDLPSLD      SS+  T S    R   GS SAS 
Sbjct: 12  VSSENPSGWIFDDYGLLEDIPVPGGDLPSLDPAAPIWSSQSLTCSTPPLRARSGSCSASG 71

Query: 61  SKAHKEKVRRNRLNDRFLELNSILNHGTSPKIVKSVILGDAVRMILQLRDEAQKLEESNE 120
           SKA +EK+RR+RLNDRFLEL SIL+ G   K+ K+VIL DAVRM+ QLRDEAQKL ESNE
Sbjct: 72  SKACREKMRRDRLNDRFLELGSILDPGRPLKVDKAVILVDAVRMVTQLRDEAQKLRESNE 131

Query: 121 NFLEKINEMKAEKNELRDEKQRLKEAKDNLKQKMKTFITQPSFLPHPPA----FSAPNHV 180
           +  EKINE+KAEKNELRDEKQRLK  K+NL+Q++K   TQP FLPHPPA    FS P  V
Sbjct: 132 SLQEKINELKAEKNELRDEKQRLKTEKENLEQQVKALGTQPGFLPHPPAIPTPFSTPGQV 191

Query: 181 VGAKLIPVIGYPGVSMWKFMPPGTMDTSQDHVLRPPVA 210
           VG KL+P +GYPGVSMW+F+PP ++DTSQDH+LRPPVA
Sbjct: 192 VGGKLVPFVGYPGVSMWQFLPPASVDTSQDHILRPPVA 229

[Close]

BLAST of CmaCh18G002300 vs. NCBI nr
Match: gi|645236723|ref|XP_008224874.1| (PREDICTED: transcription factor ILR3-like [Prunus mume])

HSP 1 Score: 237.3 bits (604), Expect = 2.5e-59
Identity = 133/234 (56.84%), Postives = 162/234 (69.23%), Query Frame = 1


Query: 4   PEITDWVFDYALIEDFPVPVGDLPSLDLPVCTLSSRDFTA------SFRMSPGSSASL-- 63
           P+  +WVFDY ++ED PVP GDLP LDLP  T  S  F A       F  S G+S S+  
Sbjct: 5   PQNHNWVFDYGVLEDIPVPGGDLPPLDLPGFTWPSHSFVAPAAPSVDFDDSFGNSDSIKE 64

Query: 64  ----------------SKAHKEKVRRNRLNDRFLELNSILNHGTSPKIVKSVILGDAVRM 123
                           SKA +EK+RR+RLNDRFLEL+S+L  G  PK  K+ ILGDAVR+
Sbjct: 65  SGCRKRVRSGSCNVTGSKACREKMRRDRLNDRFLELSSMLEPGRPPKTDKAAILGDAVRV 124

Query: 124 ILQLRDEAQKLEESNENFLEKINEMKAEKNELRDEKQRLKEAKDNLKQKMKTFITQPSFL 183
           + QLR EAQ+L++SN +  EKINE+KAEKNELRDEKQRLK  K+N+++++K   TQP FL
Sbjct: 125 VNQLRGEAQQLKDSNGDLQEKINELKAEKNELRDEKQRLKTEKENIERQIKALNTQPGFL 184

Query: 184 PHPPA----FSAPNHVVGAKLIPVIGYPGVSMWKFMPPGTMDTSQDHVLRPPVA 210
           PHP A    FSAP  VVG KL+P +GYPGVSMW+FMPP  +DTSQDHVLRPPVA
Sbjct: 185 PHPAAIPGPFSAPGQVVGGKLMPFVGYPGVSMWQFMPPAAVDTSQDHVLRPPVA 238

[Close]

BLAST of CmaCh18G002300 vs. NCBI nr
Match: gi|568827209|ref|XP_006467957.1| (PREDICTED: transcription factor ILR3 [Citrus sinensis])

HSP 1 Score: 236.5 bits (602), Expect = 4.2e-59
Identity = 134/235 (57.02%), Postives = 165/235 (70.21%), Query Frame = 1


Query: 1   MESPEITDWVFDYALIEDFPVPVGDLPSLDLPVCTLSSR--------DFTASF------- 60
           M SP  ++W+FD  L++D  V  GDLPSLD P    SS         +F  SF       
Sbjct: 1   MSSPYNSNWIFDCGLLDDIGVSGGDLPSLDPPEVLWSSSTSNPPLSAEFNDSFGNLDAFK 60

Query: 61  ------RMSPGS-SASLSKAHKEKVRRNRLNDRFLELNSILNHGTSPKIVKSVILGDAVR 120
                 R+  GS SAS SKA +EK+RR+RLNDRF+EL SIL+ G  PK+ K+V+L DAV+
Sbjct: 61  ETGSRKRVRSGSCSASGSKACREKMRRDRLNDRFMELASILDPGRPPKMDKTVLLADAVQ 120

Query: 121 MILQLRDEAQKLEESNENFLEKINEMKAEKNELRDEKQRLKEAKDNLKQKMKTFITQPSF 180
           M+ QLRDEAQKL+ SNE  L KINE+K EKNELRDEKQRLK  K+NL++++K   +QP+F
Sbjct: 121 MVTQLRDEAQKLKVSNEKLLGKINELKCEKNELRDEKQRLKNEKENLERQVKALSSQPAF 180

Query: 181 LPHPP----AFSAPNHVVGAKLIPVIGYPGVSMWKFMPPGTMDTSQDHVLRPPVA 210
           LPHPP     FSAP  VVG KL+P++GYPGVSMW+FMPP  +DTSQDHVLRPPVA
Sbjct: 181 LPHPPPVPAPFSAPGQVVGGKLVPLVGYPGVSMWQFMPPAAVDTSQDHVLRPPVA 235

The following BLAST results are available for this feature:

BLAST of CmaCh18G002300 vs. Swiss-Prot


Match Name	E-value	Identity	Description
ILR3_ARATH	3.8e-44	60.00	Transcription factor ILR3 OS=Arabidopsis thaliana GN=ILR3 PE=1 SV=1	[more]
BH115_ARATH	6.1e-42	46.26	Transcription factor bHLH115 OS=Arabidopsis thaliana GN=BHLH115 PE=2 SV=1	[more]
BH104_ARATH	1.7e-28	50.00	Transcription factor bHLH104 OS=Arabidopsis thaliana GN=BHLH104 PE=2 SV=1	[more]
BH034_ARATH	7.3e-27	44.65	Transcription factor bHLH34 OS=Arabidopsis thaliana GN=BHLH34 PE=2 SV=1	[more]
BH121_ARATH	2.6e-08	31.40	Transcription factor bHLH121 OS=Arabidopsis thaliana GN=BHLH121 PE=2 SV=1	[more]

BLAST of CmaCh18G002300 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LX71_CUCSA	1.2e-81	71.49	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G065960 PE=4 SV=1	[more]
A0A061GF70_THECC	9.8e-63	63.30	DNA binding protein, putative isoform 2 OS=Theobroma cacao GN=TCM_030082 PE=4 SV...	[more]
A0A067GJL0_CITSI	2.9e-59	57.02	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g026702mg PE=4 SV=1	[more]
V4UJ84_9ROSI	5.0e-59	57.02	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10016511mg PE=4 SV=1	[more]
A0A0U2I0R6_9ROSA	1.5e-58	56.41	BHLH transcription factor OS=Prunus pseudocerasus PE=2 SV=1	[more]

BLAST of CmaCh18G002300 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G54680.1	2.2e-45	60.00	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT1G51070.2	9.4e-41	54.94	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT4G14410.1	9.7e-30	50.00	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT3G23210.1	4.1e-28	44.65	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT3G19860.2	1.5e-09	31.40	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]

BLAST of CmaCh18G002300 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449454698\|ref\|XP_004145091.1\|	1.8e-81	71.49	PREDICTED: transcription factor ILR3-like [Cucumis sativus]	[more]
gi\|659067851\|ref\|XP_008441610.1\|	2.3e-81	72.34	PREDICTED: transcription factor ILR3-like [Cucumis melo]	[more]
gi\|590625564\|ref\|XP_007025918.1\|	1.4e-62	63.30	DNA binding protein, putative isoform 2 [Theobroma cacao]	[more]
gi\|645236723\|ref\|XP_008224874.1\|	2.5e-59	56.84	PREDICTED: transcription factor ILR3-like [Prunus mume]	[more]
gi\|568827209\|ref\|XP_006467957.1\|	4.2e-59	57.02	PREDICTED: transcription factor ILR3 [Citrus sinensis]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR011598	bHLH_dom

Vocabulary: **Molecular Function**
Term	Definition
GO:0046983	protein dimerization activity

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0045454	cell redox homeostasis
biological_process	GO:0006662	glycerol ether metabolic process
biological_process	GO:0055114	oxidation-reduction process
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0005623	cell
molecular_function	GO:0046983	protein dimerization activity
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0015035	protein disulfide oxidoreductase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh18G002300.1	CmaCh18G002300.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	GENE3D	G3DSA:4.10.280.10		coord: 60..125 score: 4.6
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PFAM	PF00010	HLH	coord: 57..103 score: 8.
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	SMART	SM00353	finulus	coord: 58..109 score: 8.
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PROFILE	PS50888	BHLH	coord: 52..103 score: 10
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	unknown	SSF47459	HLH, helix-loop-helix DNA-binding domain	coord: 48..115 score: 1.44
None	No IPR available	unknown	Coil	Coil	coord: 93..155 scor
None	No IPR available	PANTHER	PTHR23042	CIRCADIAN PROTEIN CLOCK/ARNT/BMAL/PAS	coord: 1..209 score: 2.0
None	No IPR available	PANTHER	PTHR23042:SF67	TRANSCRIPTION FACTOR ILR3-RELATED	coord: 1..209 score: 2.0

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh18G002300	Cucsa.086300	Cucumber (Gy14) v1	cgycmaB0163
CmaCh18G002300	Cla019420	Watermelon (97103) v1	cmawmB371
CmaCh18G002300	Csa1G065960	Cucumber (Chinese Long) v2	cmacuB397
CmaCh18G002300	MELO3C002507	Melon (DHL92) v3.5.1	cmameB356
CmaCh18G002300	ClCG03G005100	Watermelon (Charleston Gray)	cmawcgB358
CmaCh18G002300	CSPI01G11200	Wild cucumber (PI 183967)	cmacpiB401
CmaCh18G002300	CmoCh18G003010	Cucurbita moschata (Rifu)	cmacmoB409
CmaCh18G002300	CmoCh13G007280	Cucurbita moschata (Rifu)	cmacmoB393
CmaCh18G002300	Lsi02G006560	Bottle gourd (USVL1VR-Ls)	cmalsiB373
CmaCh18G002300	Cp4.1LG09g08850	Cucurbita pepo (Zucchini)	cmacpeB414
CmaCh18G002300	Cp4.1LG20g03990	Cucurbita pepo (Zucchini)	cmacpeB442
CmaCh18G002300	MELO3C002507.2	Melon (DHL92) v3.6.1	cmamedB413
CmaCh18G002300	CsaV3_1G011300	Cucumber (Chinese Long) v3	cmacucB0474
CmaCh18G002300	Cla97C03G056310	Watermelon (97103) v2	cmawmbB417
CmaCh18G002300	Bhi08G001422	Wax gourd	cmawgoB0524
CmaCh18G002300	CsGy1G011150	Cucumber (Gy14) v2	cgybcmaB093
CmaCh18G002300	Carg07520	Silver-seed gourd	carcmaB1394
CmaCh18G002300	Carg26531	Silver-seed gourd	carcmaB1107

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmaCh18G002300	CmaCh13G007060	Cucurbita maxima (Rimu)	cmacmaB209

The following block(s) are covering this gene:

None