CmaCh17G012510 (gene) Cucurbita maxima (Rimu)
The following sequences are available for this feature:
Legend: exonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGCAAGGGCTTTATGGGGATAACTCACTCAAAGCGTATTTATACCCGACACATCTTATTAGCTATACGCATCACTCTTCTCAAAAGACTTAAACATATTAGTCTTGTTTGTATTTTATGAGTACTCTCATGTTCACTGTTTCAGTGATTCTAGCTAGTTTTGTGATAGCTCGAGCGGTAGGTATTGTTTCACTCGTTCAACTCGTTCAACTCCAATAGCTGATGACGTAAACAAACATTTACTAAAAACAAACATGTTCTAAGCCTTGCCCTAAATATTTATATGTTTTGGTGATGAAAAAAACATAGGTATTGTGAAGGACATTATTGTCTTTTCACTCAACCCCATTAAAGCTTCTTCCTTGTTGTTGTTGTTCTTCTTTTGTTGAAGCTTCTTCACCCTCTTCTCTCTCCTTGGCTTCTCTGTCTTCCTTCATAGGAATTGTTGCTGGTTAATGGATATTGAACCCTTGTGGGGTGTTGGGGGGTGGTTTCTTGTCTTAAATTGTATGGCAACTGCTACACCAAACCAATCTTCATCTTCATCATCTCACTCTCTCTTTTTCCTTCTTTTCTTTTCTTTCCTCCTCCTTCTAACCCTCATTTCCTCTCCTCCTCCTCCTCTTTCGCCTCGTTCCATGGCGGCTGACACCCACCGCCGTCTCTCTGCCGCCACCGCCTTCCATCCGAAGAAATCTCGACCTCGATCCTCTCGTGCCACAGCCGGAGAGTTCGGAGCCGAAGCCCATGAAGTCCCCAGTGGTCCAAACCCTATATCCAACTAA ATGCAAGGGCTTTATGGGGATAACTCACTCAAAGCCTTCTTCACCCTCTTCTCTCTCCTTGGCTTCTCTGTCTTCCTTCATAGGAATTGTTGCTGGTTAATGGATATTGAACCCTTGTGGGGTGTTGGGGGGTGGTTTCTTGTCTTAAATTGTATGGCAACTGCTACACCAAACCAATCTTCATCTTCATCATCTCACTCTCTCTTTTTCCTTCTTTTCTTTTCTTTCCTCCTCCTTCTAACCCTCATTTCCTCTCCTCCTCCTCCTCTTTCGCCTCGTTCCATGGCGGCTGACACCCACCGCCGTCTCTCTGCCGCCACCGCCTTCCATCCGAAGAAATCTCGACCTCGATCCTCTCGTGCCACAGCCGGAGAGTTCGGAGCCGAAGCCCATGAAGTCCCCAGTGGTCCAAACCCTATATCCAACTAA ATGCAAGGGCTTTATGGGGATAACTCACTCAAAGCCTTCTTCACCCTCTTCTCTCTCCTTGGCTTCTCTGTCTTCCTTCATAGGAATTGTTGCTGGTTAATGGATATTGAACCCTTGTGGGGTGTTGGGGGGTGGTTTCTTGTCTTAAATTGTATGGCAACTGCTACACCAAACCAATCTTCATCTTCATCATCTCACTCTCTCTTTTTCCTTCTTTTCTTTTCTTTCCTCCTCCTTCTAACCCTCATTTCCTCTCCTCCTCCTCCTCTTTCGCCTCGTTCCATGGCGGCTGACACCCACCGCCGTCTCTCTGCCGCCACCGCCTTCCATCCGAAGAAATCTCGACCTCGATCCTCTCGTGCCACAGCCGGAGAGTTCGGAGCCGAAGCCCATGAAGTCCCCAGTGGTCCAAACCCTATATCCAACTAA MQGLYGDNSLKAFFTLFSLLGFSVFLHRNCCWLMDIEPLWGVGGWFLVLNCMATATPNQSSSSSSHSLFFLLFFSFLLLLTLISSPPPPLSPRSMAADTHRRLSAATAFHPKKSRPRSSRATAGEFGAEAHEVPSGPNPISN
BLAST of CmaCh17G012510 vs. Swiss-Prot
Match: TDIF_ZINVI (CLAVATA3/ESR (CLE)-related protein TDIF OS=Zinnia violacea GN=TDIF PE=1 SV=1) HSP 1 Score: 60.8 bits (146), Expect = 1.3e-08 Identity = 48/134 (35.82%), Postives = 62/134 (46.27%), Query Frame = 1
BLAST of CmaCh17G012510 vs. Swiss-Prot
Match: CLE41_ARATH (CLAVATA3/ESR (CLE)-related protein 41 OS=Arabidopsis thaliana GN=CLE41 PE=1 SV=1) HSP 1 Score: 53.5 bits (127), Expect = 2.2e-06 Identity = 46/101 (45.54%), Postives = 56/101 (55.45%), Query Frame = 1
BLAST of CmaCh17G012510 vs. TrEMBL
Match: M5VZL5_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa013219mg PE=4 SV=1) HSP 1 Score: 95.9 bits (237), Expect = 4.2e-17 Identity = 66/136 (48.53%), Postives = 80/136 (58.82%), Query Frame = 1
BLAST of CmaCh17G012510 vs. TrEMBL
Match: A0A0D2PF23_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_004G225300 PE=4 SV=1) HSP 1 Score: 89.4 bits (220), Expect = 3.9e-15 Identity = 62/125 (49.60%), Postives = 75/125 (60.00%), Query Frame = 1
BLAST of CmaCh17G012510 vs. TrEMBL
Match: W9S349_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_015208 PE=4 SV=1) HSP 1 Score: 88.6 bits (218), Expect = 6.7e-15 Identity = 65/135 (48.15%), Postives = 79/135 (58.52%), Query Frame = 1
BLAST of CmaCh17G012510 vs. TrEMBL
Match: A0A0S3RV03_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.04G174300 PE=4 SV=1) HSP 1 Score: 88.6 bits (218), Expect = 6.7e-15 Identity = 58/120 (48.33%), Postives = 74/120 (61.67%), Query Frame = 1
BLAST of CmaCh17G012510 vs. TrEMBL
Match: V7B413_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_008G124100g PE=4 SV=1) HSP 1 Score: 88.2 bits (217), Expect = 8.8e-15 Identity = 55/118 (46.61%), Postives = 64/118 (54.24%), Query Frame = 1
BLAST of CmaCh17G012510 vs. TAIR10
Match: AT3G24770.1 (AT3G24770.1 CLAVATA3/ESR-RELATED 41) HSP 1 Score: 53.5 bits (127), Expect = 1.2e-07 Identity = 46/101 (45.54%), Postives = 56/101 (55.45%), Query Frame = 1
BLAST of CmaCh17G012510 vs. NCBI nr
Match: gi|595797091|ref|XP_007201234.1| (hypothetical protein PRUPE_ppa013219mg [Prunus persica]) HSP 1 Score: 95.9 bits (237), Expect = 6.0e-17 Identity = 66/136 (48.53%), Postives = 80/136 (58.82%), Query Frame = 1
BLAST of CmaCh17G012510 vs. NCBI nr
Match: gi|645259722|ref|XP_008235497.1| (PREDICTED: CLAVATA3/ESR (CLE)-related protein 44 [Prunus mume]) HSP 1 Score: 91.7 bits (226), Expect = 1.1e-15 Identity = 63/138 (45.65%), Postives = 79/138 (57.25%), Query Frame = 1
BLAST of CmaCh17G012510 vs. NCBI nr
Match: gi|823152995|ref|XP_012476332.1| (PREDICTED: CLAVATA3/ESR (CLE)-related protein 41-like [Gossypium raimondii]) HSP 1 Score: 89.4 bits (220), Expect = 5.7e-15 Identity = 62/125 (49.60%), Postives = 75/125 (60.00%), Query Frame = 1
BLAST of CmaCh17G012510 vs. NCBI nr
Match: gi|763758227|gb|KJB25558.1| (hypothetical protein B456_004G225300 [Gossypium raimondii]) HSP 1 Score: 89.4 bits (220), Expect = 5.7e-15 Identity = 62/125 (49.60%), Postives = 75/125 (60.00%), Query Frame = 1
BLAST of CmaCh17G012510 vs. NCBI nr
Match: gi|965669778|dbj|BAT84385.1| (hypothetical protein VIGAN_04174300 [Vigna angularis var. angularis]) HSP 1 Score: 88.6 bits (218), Expect = 9.7e-15 Identity = 58/120 (48.33%), Postives = 74/120 (61.67%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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