CmaCh17G011920 (gene) Cucurbita maxima (Rimu)

Overview
NameCmaCh17G011920
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu))
DescriptionKelch repeat-containing protein
LocationCma_Chr17 : 8241222 .. 8242259 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCTGGTTTGATTGAAGGACTCCCTGATGCAATTTCCATAAGATGTCTTGCTTTTGTTCCATATTATCTCCACCCCAAGTTGGAACTCGTTTCTCGCTCTTGGAAAGCAGCTATTCGTAGCACCGAACTGTTTAGAGCTCGACAGGAAGTTGGTTCGTCCGAGGATTTACTATGTGTGTGTTCTTATGATCCAAATAATACATGGAAGCTTTATGACCCTCTTCAGAACCTTTGGATGACCCTCCCTGAACTTCCATCTAAAATAAAGCACCTTGCGAATTTTGGTGTTGTCTCCACTTCTCAAAAGCTGTTTGTTCTCGGTGGCCGTGGCGATGCTGTTGATCCAGTGACCGGTGACCGTGAGGAGACCTCTTCAACCAACGAGGTCTGGTCATTTGACCCTGTAACTCGAATGTGGTCCATGCGAGCACCAATGCTCGTACCACGTTCTATGTTTGCCTGCTGTGTTGTGGATGGGAAAATTGTAGTAGCAGGTGGCTTCACCAGCTTATCAAAATCAACTTCTCAGGCAGAAATGTATGACATTGAGAAGGATGTTTGGATTCCATTACCTGATCTACTTCACACCCGTGATTCAACCTGCATTGGCCTGATGATTGGAGGAAAAATGCACATTATGTACGGAGGGGTCTCCACGGTGCAAGTTTTTGACAGTTTGGAGCTGAAATGGAGAGTTGAGTATTACGGCTGGCTTCCCGGCCACAAGGCTGTTGTTGGAGGTTCACTCTACACCATGAGCCAAGGACTTGTGTTCAAGCAGGAGGAACGAGGTGCGCAGGCTGTTGTTTCGGCGTCTCAGTTTGTCCAAAGGATCGGTATGGCAATGGTCGGGTTTAGAGGTGAATTGTATGTAATTGGAGGCATAGTTCGCCCCGAACGCTTCGATGGTGACCTTGTAAAACTATCTGACGTGCATGTTCTTAAGGTGAGAAATGAGAAGCCAAGTTGGTATTGTGCTGCTCCTACGAGCCGATGCTCTGGGACTATTCTTGGTTGCACGGTTTTAAGAATATAG

mRNA sequence

ATGTCTGGTTTGATTGAAGGACTCCCTGATGCAATTTCCATAAGATGTCTTGCTTTTGTTCCATATTATCTCCACCCCAAGTTGGAACTCGTTTCTCGCTCTTGGAAAGCAGCTATTCGTAGCACCGAACTGTTTAGAGCTCGACAGGAAGTTGGTTCGTCCGAGGATTTACTATGTGTGTGTTCTTATGATCCAAATAATACATGGAAGCTTTATGACCCTCTTCAGAACCTTTGGATGACCCTCCCTGAACTTCCATCTAAAATAAAGCACCTTGCGAATTTTGGTGTTGTCTCCACTTCTCAAAAGCTGTTTGTTCTCGGTGGCCGTGGCGATGCTGTTGATCCAGTGACCGGTGACCGTGAGGAGACCTCTTCAACCAACGAGGTCTGGTCATTTGACCCTGTAACTCGAATGTGGTCCATGCGAGCACCAATGCTCGTACCACGTTCTATGTTTGCCTGCTGTGTTGTGGATGGGAAAATTGTAGTAGCAGGTGGCTTCACCAGCTTATCAAAATCAACTTCTCAGGCAGAAATGTATGACATTGAGAAGGATGTTTGGATTCCATTACCTGATCTACTTCACACCCGTGATTCAACCTGCATTGGCCTGATGATTGGAGGAAAAATGCACATTATGTACGGAGGGGTCTCCACGGTGCAAGTTTTTGACAGTTTGGAGCTGAAATGGAGAGTTGAGTATTACGGCTGGCTTCCCGGCCACAAGGCTGTTGTTGGAGGTTCACTCTACACCATGAGCCAAGGACTTGTGTTCAAGCAGGAGGAACGAGGTGCGCAGGCTGTTGTTTCGGCGTCTCAGTTTGTCCAAAGGATCGGTATGGCAATGGTCGGGTTTAGAGGTGAATTGTATGTAATTGGAGGCATAGTTCGCCCCGAACGCTTCGATGGTGACCTTGTAAAACTATCTGACGTGCATGTTCTTAAGGTGAGAAATGAGAAGCCAAGTTGGTATTGTGCTGCTCCTACGAGCCGATGCTCTGGGACTATTCTTGGTTGCACGGTTTTAAGAATATAG

Coding sequence (CDS)

ATGTCTGGTTTGATTGAAGGACTCCCTGATGCAATTTCCATAAGATGTCTTGCTTTTGTTCCATATTATCTCCACCCCAAGTTGGAACTCGTTTCTCGCTCTTGGAAAGCAGCTATTCGTAGCACCGAACTGTTTAGAGCTCGACAGGAAGTTGGTTCGTCCGAGGATTTACTATGTGTGTGTTCTTATGATCCAAATAATACATGGAAGCTTTATGACCCTCTTCAGAACCTTTGGATGACCCTCCCTGAACTTCCATCTAAAATAAAGCACCTTGCGAATTTTGGTGTTGTCTCCACTTCTCAAAAGCTGTTTGTTCTCGGTGGCCGTGGCGATGCTGTTGATCCAGTGACCGGTGACCGTGAGGAGACCTCTTCAACCAACGAGGTCTGGTCATTTGACCCTGTAACTCGAATGTGGTCCATGCGAGCACCAATGCTCGTACCACGTTCTATGTTTGCCTGCTGTGTTGTGGATGGGAAAATTGTAGTAGCAGGTGGCTTCACCAGCTTATCAAAATCAACTTCTCAGGCAGAAATGTATGACATTGAGAAGGATGTTTGGATTCCATTACCTGATCTACTTCACACCCGTGATTCAACCTGCATTGGCCTGATGATTGGAGGAAAAATGCACATTATGTACGGAGGGGTCTCCACGGTGCAAGTTTTTGACAGTTTGGAGCTGAAATGGAGAGTTGAGTATTACGGCTGGCTTCCCGGCCACAAGGCTGTTGTTGGAGGTTCACTCTACACCATGAGCCAAGGACTTGTGTTCAAGCAGGAGGAACGAGGTGCGCAGGCTGTTGTTTCGGCGTCTCAGTTTGTCCAAAGGATCGGTATGGCAATGGTCGGGTTTAGAGGTGAATTGTATGTAATTGGAGGCATAGTTCGCCCCGAACGCTTCGATGGTGACCTTGTAAAACTATCTGACGTGCATGTTCTTAAGGTGAGAAATGAGAAGCCAAGTTGGTATTGTGCTGCTCCTACGAGCCGATGCTCTGGGACTATTCTTGGTTGCACGGTTTTAAGAATATAG

Protein sequence

MSGLIEGLPDAISIRCLAFVPYYLHPKLELVSRSWKAAIRSTELFRARQEVGSSEDLLCVCSYDPNNTWKLYDPLQNLWMTLPELPSKIKHLANFGVVSTSQKLFVLGGRGDAVDPVTGDREETSSTNEVWSFDPVTRMWSMRAPMLVPRSMFACCVVDGKIVVAGGFTSLSKSTSQAEMYDIEKDVWIPLPDLLHTRDSTCIGLMIGGKMHIMYGGVSTVQVFDSLELKWRVEYYGWLPGHKAVVGGSLYTMSQGLVFKQEERGAQAVVSASQFVQRIGMAMVGFRGELYVIGGIVRPERFDGDLVKLSDVHVLKVRNEKPSWYCAAPTSRCSGTILGCTVLRI
Homology
[Close]
BLAST of CmaCh17G011920 vs. Swiss-Prot
Match: SKI30_ARATH (F-box/kelch-repeat protein SKIP30 OS=Arabidopsis thaliana GN=SKIP30 PE=1 SV=2)

HSP 1 Score: 425.2 bits (1092), Expect = 6.6e-118
Identity = 199/345 (57.68%), Postives = 258/345 (74.78%), Query Frame = 1 

Query: 1   MSGLIEGLPDAISIRCLAFVPYYLHPKLELVSRSWKAAIRSTELFRARQEVGSSEDLLCV 60
           MSGL++G+P+A+++RCLA VP +LHP LELVSRSW+AAIRS ELFR R+E+ SSE LLCV
Sbjct: 8   MSGLLDGIPEAVALRCLAHVPLHLHPNLELVSRSWRAAIRSHELFRVRKELRSSEHLLCV 67

Query: 61  CSYDPNNTWKLYDPLQNLWMTLPELPSKIKHLANFGVVSTSQKLFVLGGRGDAVDPVTGD 120
           C++DP N W++Y P  + W+TLP LPS+I+HLA+FG V+T+  LFVLGG  DAV PVTGD
Sbjct: 68  CAFDPENIWQVYSPNCDRWLTLPLLPSRIRHLAHFGAVTTAGMLFVLGGGSDAVSPVTGD 127

Query: 121 REETSSTNEVWSFDPVTRMWSMRAPMLVPRSMFACCVVDGKIVVAGGFTSLSKSTSQAEM 180
            + T +T++VWS+D V R W+ RA MLVPR+MFACCV+ GKIVVAGGFT+  KS S AEM
Sbjct: 128 HDGTFATDQVWSYDFVQRQWTPRASMLVPRAMFACCVLQGKIVVAGGFTTCRKSISGAEM 187

Query: 181 YDIEKDVWIPLPDLLHTRDSTCIGLMIGGKMHIMYGGVSTVQVFDSLELKWRVEYYGWLP 240
           YD E DVW  +PDL  T +S C GL++ GK+H+++ G+STVQV +S++L W V+ YGW  
Sbjct: 188 YDPENDVWTSIPDLHQTHNSACSGLVVNGKVHVLHKGLSTVQVLESVKLGWDVKDYGWPQ 247

Query: 241 GHKAVVGGSLYTMSQGLVFKQEERGAQAVVSASQFVQRIGMAMVGFRGELYVIGGIVRPE 300
           G   VV   LY MS GLVFKQE    + V SAS+F +RIGMAM     E+ ++GG++ P+
Sbjct: 248 GPMVVVEDVLYVMSHGLVFKQEGDTWKMVASASEFKRRIGMAMTSLSDEVLIVGGVIGPD 307

Query: 301 RFDGDLVKLSDVHVLKVRNEKPSWYCAAPTSRCSGTILGCTVLRI 346
           R + D+  LSDV  L V N++P+W   AP +RC GTILGCT L I
Sbjct: 308 RLNWDIKPLSDVDALTVGNDRPAWRSVAPMTRCRGTILGCTQLTI 352

[Close]
BLAST of CmaCh17G011920 vs. Swiss-Prot
Match: FBK5_ARATH (F-box/kelch-repeat protein At1g16250 OS=Arabidopsis thaliana GN=At1g16250 PE=2 SV=1)

HSP 1 Score: 129.0 bits (323), Expect = 9.8e-29
Identity = 104/373 (27.88%), Postives = 159/373 (42.63%), Query Frame = 1 

Query: 4   LIEGLPDAISIRCLAFVPYYLHPKLELVSRSWKAAIRSTELFRARQEVGSSEDLLCVCSY 63
           +I GLPD +++RC+A + +  H  LE VSR W+  +R  +    +   G S   L V + 
Sbjct: 8   IIPGLPDDLALRCIAKLSHGYHGVLECVSRGWRDLVRGADYSCYKARNGWSGSWLFVLTE 67

Query: 64  DPNNTWKLYDPLQNLWMTLPELPSKIK--HLANFGVVSTSQKLFVLGGRGDAVDPVTGDR 123
              N W  YDP  + W  LP   +     H + F  V  S  L V+GG   A    +   
Sbjct: 68  RSKNQWVAYDPEADRWHPLPRTRAVQDGWHHSGFACVCVSNCLLVIGG-CYAPSVSSFPH 127

Query: 124 EETSSTNEVWSFDPVTRMWSMRAPMLVPRSMFACCVVDGKIVVAGGFT-SLSKSTSQAEM 183
           ++   T +V  FDP  + W M A M  PR+ FAC  V GK+ VAGG   + S+    AE+
Sbjct: 128 QKPVVTKDVMRFDPFKKQWKMVASMRTPRTHFACTSVSGKVYVAGGRNLTHSRGIPSAEV 187

Query: 184 YDIEKDVWIPLPDLLHTRDSTCIGLMIGGKMHIM-----YGGVSTVQVFDSLELKWRVEY 243
           YD   D W  LP +   +   C GL   G  H++     +   ++ +VF+  ++ W    
Sbjct: 188 YDPVADRWEELPAMPRPQ-MDCSGLSYRGCFHVLSDQVGFAEQNSSEVFNPRDMTWSTVE 247

Query: 244 YGWLPGHKA-------VVGGSLYTM-------------SQGLVFKQEERGAQAVVSASQF 303
             W P  +A       +    +YT+              +G  +      +  + +  + 
Sbjct: 248 DVW-PFSRAMQFAVQVMKNDRVYTIVDWGESLIKTRDTDEGEWYNVGSVPSVVLPNHPRE 307

Query: 304 VQRIGMAMVGFRGELYVIGGIVRPERFDG----DLVKLSDVHVLKVRNEKPSWYCAAPTS 344
           ++  G      R ELYVIGG V      G    D+V+L  V V    +   +W    P  
Sbjct: 308 LEAFGYGFAALRNELYVIGGKVLKWEESGAGRFDIVRLPVVRVCNPLDRPLNWRETKPMC 367

[Close]
BLAST of CmaCh17G011920 vs. Swiss-Prot
Match: FBK28_ARATH (F-box/kelch-repeat protein At1g67480 OS=Arabidopsis thaliana GN=At1g67480 PE=2 SV=1)

HSP 1 Score: 101.7 bits (252), Expect = 1.7e-20
Identity = 71/230 (30.87%), Postives = 105/230 (45.65%), Query Frame = 1 

Query: 4   LIEGLPDAISIRCLAFVPYYLHPKLELVSRSWKAAIRSTELFRARQEVGSSEDLLCVCSY 63
           LI GLPD ++ +CLA VP    P +  V + W+  ++S E    R+  G  E+ L V + 
Sbjct: 39  LIPGLPDDVAKQCLALVPRARFPSMGSVCKKWRFVVQSKEFITVRRLAGMLEEWLYVLTM 98

Query: 64  D---PNNTWKLYDPLQNLWMTLPELPSKIKHLANFGVVSTSQKLFVLGG----RGDAVDP 123
           +    +N W++ D L     +LP +P   K    F VV    KL V+ G     G  V  
Sbjct: 99  NAGGKDNRWEVMDCLGQKLSSLPPMPGPAK--TGFKVVVVDGKLLVIAGCCMINGSLV-- 158

Query: 124 VTGDREETSSTNEVWSFDPVTRMWSMRAPMLVPRSMFACCVVDGKIVVAGGFTSLSKSTS 183
                    ++ +V+ +D     WS  A + V R  FAC  V+G + V GG     +S S
Sbjct: 159 ---------ASADVYQYDTCLNSWSRLADLEVARYDFACAEVNGHVYVVGGHGVDGESLS 218

Query: 184 QAEMYDIEKDVWIPLPDLLHTRDSTCIGLMIGGKMHIMYGGVSTVQVFDS 227
            AE+YD E   W  +  L   R   C      GK+++M GG S   + +S
Sbjct: 219 SAEVYDPETCTWTFIESLRRPRWG-CFASAFNGKLYVM-GGRSNFTIGNS 253

[Close]
BLAST of CmaCh17G011920 vs. Swiss-Prot
Match: FBK22_ARATH (F-box/kelch-repeat protein At1g55270 OS=Arabidopsis thaliana GN=At1g55270 PE=2 SV=1)

HSP 1 Score: 101.3 bits (251), Expect = 2.2e-20
Identity = 60/195 (30.77%), Postives = 93/195 (47.69%), Query Frame = 1 

Query: 4   LIEGLPDAISIRCLAFVPYYLHPKLELVSRSWKAAIRSTELFRARQEVGSSEDLLCVCSY 63
           L+ GLPD +++ CL  VP   H KL LV + W         +  R+ +G SE+ + V   
Sbjct: 78  LLPGLPDDLAVACLIRVPRAEHRKLRLVCKRWYRLASGNFFYSQRKLLGMSEEWVYVFKR 137

Query: 64  DPNN--TWKLYDPLQNLWMTLPELPSKIKHLANFG-VVSTSQKLFVLGGRGDAVDPVTGD 123
           D +   +W  +DP+  LW  LP +P +      FG  V +   L++ GG+    DP+ G 
Sbjct: 138 DRDGKISWNTFDPISQLWQPLPPVPREYSEAVGFGCAVLSGCHLYLFGGK----DPLRG- 197

Query: 124 REETSSTNEVWSFDPVTRMWSMRAPMLVPRSMFACCVVDGKIVVAGG-FTSLSKSTSQAE 183
                S   V  ++  T  W     ML  R  F CCV++  + VAGG    + ++   AE
Sbjct: 198 -----SMRRVIFYNARTNKWHRAPDMLRKRHFFGCCVINNCLYVAGGECEGIQRTLRSAE 257

Query: 184 MYDIEKDVWIPLPDL 195
           +YD  K+ W  + D+
Sbjct: 258 VYDPNKNRWSFIADM 262

[Close]
BLAST of CmaCh17G011920 vs. Swiss-Prot
Match: FK132_ARATH (F-box/kelch-repeat protein At5g60570 OS=Arabidopsis thaliana GN=At5g60570 PE=2 SV=1)

HSP 1 Score: 99.0 bits (245), Expect = 1.1e-19
Identity = 71/238 (29.83%), Postives = 113/238 (47.48%), Query Frame = 1 

Query: 4   LIEGLPDAISIRCLAFVPYYLHPKLELVSRSWKAAIRSTELFRARQEVGSSEDLL-CVCS 63
           ++ GL D +++ CLA+VP   +P L  V++ +   I S  LF  R+E+G  E L+  VC 
Sbjct: 49  VLPGLIDDVALNCLAWVPRSDYPSLSCVNKKYNKLINSGHLFALRKELGIVEYLVFMVC- 108

Query: 64  YDPNNTWKLYDPLQNLWMTLPELP-SKIKHLANFGVVSTSQKLFVLGGRGDAVDPVTGDR 123
            DP   W ++ P++  WM LP++P  +  + A+   ++   +L V G            R
Sbjct: 109 -DPRG-WLMFSPMKKKWMVLPKMPCDECFNHADKESLAVDDELLVFG------------R 168

Query: 124 EETSSTNEVWSFDPVTRMWSMRAPMLVPRSMFACCVVDGKIVVAGGFTSLSKSTSQAEMY 183
           E       +W +   +R W     M  PR +FA   + G  +VAGG        + AE+Y
Sbjct: 169 ELFQFA--IWKYSLRSRCWVKCEGMHRPRCLFASGSLGGIAIVAGGTDMNGNILASAELY 228

Query: 184 DIEKDVWIPLPDLLHTRDSTCIGLMIGGKMHIMYGGVSTVQV-------FDSLELKWR 233
           D     W  LP+ +H+    C G  + GK +++ GG+S+  V       FD    KWR
Sbjct: 229 DSSSGRWEMLPN-MHSPRRLCSGFFMDGKFYVI-GGMSSPNVSVTFGEEFDLETRKWR 267

[Close]
BLAST of CmaCh17G011920 vs. TrEMBL
Match: A0A0A0K7B1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G387780 PE=4 SV=1)

HSP 1 Score: 554.3 bits (1427), Expect = 1.1e-154
Identity = 265/347 (76.37%), Postives = 294/347 (84.73%), Query Frame = 1 

Query: 1   MSGLIEGLPDAISIRCLAFVPYYLHPKLELVSRSWKAAIRSTELFRARQEVGSSEDLLCV 60
           MSGLIEGLPDAIS+RCLA++PYYLHPKLELVSRSWKAAIRS ELFRARQEVG SED LCV
Sbjct: 1   MSGLIEGLPDAISLRCLAYIPYYLHPKLELVSRSWKAAIRSVELFRARQEVGFSEDFLCV 60

Query: 61  CSYDPNNTWKLYDPLQNLWMTLPELPSKIKHLANFGVVSTSQKLFVLGGRGDAVDPVTGD 120
           CSY PNNTW+LYDPL N WMTLPELPSK  HL NF  VSTSQKLFVLGGR DAVDPVTGD
Sbjct: 61  CSYHPNNTWQLYDPLPNRWMTLPELPSKRMHLGNFCAVSTSQKLFVLGGRSDAVDPVTGD 120

Query: 121 REETSSTNEVWSFDPVTRMWSMRAPMLVPRSMFACCVVDGKIVVAGGFTSLSKSTSQAEM 180
           R++  STNEVWSFDP+TR WSMRAPMLVPR+MFACCVVDGKI+VAGGFTS SKSTS+AEM
Sbjct: 121 RDDNFSTNEVWSFDPITRTWSMRAPMLVPRAMFACCVVDGKIIVAGGFTSKSKSTSKAEM 180

Query: 181 YDIEKDVWIPLPDLLHTRDSTCIGLMIGGKMHIMYGGVSTVQVFDSLELKWRVEYYGWLP 240
           YD EKDVW PLPDLL T DSTCIGL++ GKMHI+Y  VSTVQV DS E+KWRVE YGW+ 
Sbjct: 181 YDSEKDVWTPLPDLLQTHDSTCIGLVVRGKMHIVYNKVSTVQVLDSSEMKWRVEDYGWVL 240

Query: 241 GHKAVVGGSLYTMS--QGLVFKQEERGAQAVVSASQFVQRIGMAMVGFRGELYVIGGIVR 300
           G KAVVG SLY M+  +G+VFKQ  R  + +  A+QF QRIGMA+VGFRG+LY IGG + 
Sbjct: 241 GLKAVVGDSLYVMNPLEGVVFKQYGRTWKVIALATQFAQRIGMAVVGFRGDLYAIGGGIH 300

Query: 301 PERFDGDLVKLSDVHVLKVRNEKPSWYCAAPTSRCSGTILGCTVLRI 346
           P R  GDL KLSDVHVL +R+E+P+W CAA  SRC GT+LGCT LRI
Sbjct: 301 PNRTGGDLTKLSDVHVLNLRDEEPTWRCAAQMSRCQGTVLGCTELRI 347

[Close]
BLAST of CmaCh17G011920 vs. TrEMBL
Match: B9SFJ2_RICCO (Protein AFR, putative OS=Ricinus communis GN=RCOM_0646580 PE=4 SV=1)

HSP 1 Score: 479.2 bits (1232), Expect = 4.3e-132
Identity = 224/345 (64.93%), Postives = 279/345 (80.87%), Query Frame = 1 

Query: 1   MSGLIEGLPDAISIRCLAFVPYYLHPKLELVSRSWKAAIRSTELFRARQEVGSSEDLLCV 60
           MS LIEGLPDAI+IRC+A VP+YLHPKLELVS SW++AIRS ELF+ARQEVGS+EDLLCV
Sbjct: 1   MSELIEGLPDAIAIRCIARVPFYLHPKLELVSHSWRSAIRSPELFKARQEVGSAEDLLCV 60

Query: 61  CSYDPNNTWKLYDPLQNLWMTLPELPSKIKHLANFGVVSTSQKLFVLGGRGDAVDPVTGD 120
           C+++P N W+LYDPL++LW+TLP LPSKI+HLA+FGVVST+ KL+VLGG  DAVDP+TGD
Sbjct: 61  CAFEPENLWQLYDPLRDLWITLPVLPSKIRHLAHFGVVSTAGKLYVLGGGSDAVDPLTGD 120

Query: 121 REETSSTNEVWSFDPVTRMWSMRAPMLVPRSMFACCVVDGKIVVAGGFTSLSKSTSQAEM 180
           ++   +TNEVWS+DPV R W++RA MLVPR+MFACCV+ GKIVVAGGFTS  KS SQAEM
Sbjct: 121 QDGNFATNEVWSYDPVIRQWALRASMLVPRAMFACCVLKGKIVVAGGFTSCRKSISQAEM 180

Query: 181 YDIEKDVWIPLPDLLHTRDSTCIGLMIGGKMHIMYGGVSTVQVFDSLELKWRVEYYGWLP 240
           YD EKDVWIP+PDL  T +S C G++IGGK+HI++ G+S VQV D++   W VE Y WL 
Sbjct: 181 YDPEKDVWIPIPDLHRTHNSACSGIVIGGKVHILHKGLSAVQVLDNVGAGWTVEDYNWLQ 240

Query: 241 GHKAVVGGSLYTMSQGLVFKQEERGAQAVVSASQFVQRIGMAMVGFRGELYVIGGIVRPE 300
           G  AVV G+LY MS GL+ KQE +  + VVSAS+F +RIG AM G   ++YVIGG++ P+
Sbjct: 241 GPMAVVHGALYVMSHGLICKQEGKVRKVVVSASEFRRRIGFAMTGLGDDIYVIGGVIGPD 300

Query: 301 RFDGDLVKLSDVHVLKVRNEKPSWYCAAPTSRCSGTILGCTVLRI 346
           R++ D+  +SDV +L V  E+P+W  AAP SRC GTILGC  LRI
Sbjct: 301 RWNWDIKPMSDVDILAVGGERPTWRQAAPMSRCRGTILGCAQLRI 345

[Close]
BLAST of CmaCh17G011920 vs. TrEMBL
Match: F6HI50_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_07s0151g00770 PE=4 SV=1)

HSP 1 Score: 478.8 bits (1231), Expect = 5.6e-132
Identity = 216/345 (62.61%), Postives = 280/345 (81.16%), Query Frame = 1 

Query: 1   MSGLIEGLPDAISIRCLAFVPYYLHPKLELVSRSWKAAIRSTELFRARQEVGSSEDLLCV 60
           MSGLIEGLPDA+++RCLA+VP+YLHP+LELVSRSW+ AIR  ELF+ARQEVGSSEDLLCV
Sbjct: 1   MSGLIEGLPDAVALRCLAWVPFYLHPRLELVSRSWRDAIRGPELFKARQEVGSSEDLLCV 60

Query: 61  CSYDPNNTWKLYDPLQNLWMTLPELPSKIKHLANFGVVSTSQKLFVLGGRGDAVDPVTGD 120
           C++DP N W+LYDP ++LW++LP LPS+I+HLA+FG VST+ KLFVLGG  DAVDP+TGD
Sbjct: 61  CAFDPENLWQLYDPRKDLWISLPVLPSRIRHLAHFGAVSTAGKLFVLGGGSDAVDPLTGD 120

Query: 121 REETSSTNEVWSFDPVTRMWSMRAPMLVPRSMFACCVVDGKIVVAGGFTSLSKSTSQAEM 180
           ++ + +TNEVWS+DP+ R W+ RAPMLVPR+MFACCV+DGKIVVAGGFTS  KS SQAE+
Sbjct: 121 QDGSFATNEVWSYDPIIRQWAPRAPMLVPRAMFACCVLDGKIVVAGGFTSCRKSISQAEI 180

Query: 181 YDIEKDVWIPLPDLLHTRDSTCIGLMIGGKMHIMYGGVSTVQVFDSLELKWRVEYYGWLP 240
           YD EKD W+ +PDL  T +S C G+++ GK+H+++ G++TVQ+ D +   WRVE YGWL 
Sbjct: 181 YDPEKDAWVSIPDLHRTHNSACSGVVLDGKVHVLHKGLTTVQILDKVGPGWRVEDYGWLQ 240

Query: 241 GHKAVVGGSLYTMSQGLVFKQEERGAQAVVSASQFVQRIGMAMVGFRGELYVIGGIVRPE 300
           G  A+V G+LY MS G++FKQE    + VVSAS+F +RIG AM G R E+YVIGG++ P+
Sbjct: 241 GPMAIVQGALYVMSHGIIFKQEREVKKMVVSASEFRRRIGFAMTGLRDEIYVIGGVIGPD 300

Query: 301 RFDGDLVKLSDVHVLKVRNEKPSWYCAAPTSRCSGTILGCTVLRI 346
           R++ D+  LSDV VL + +E+P+W   +P S+C GTI GCT LRI
Sbjct: 301 RWNWDIKPLSDVDVLTIGSERPAWRQVSPMSQCRGTIFGCTQLRI 345

[Close]
BLAST of CmaCh17G011920 vs. TrEMBL
Match: B9GSL6_POPTR (Kelch repeat-containing F-box family protein OS=Populus trichocarpa GN=POPTR_0002s05150g PE=4 SV=1)

HSP 1 Score: 477.6 bits (1228), Expect = 1.3e-131
Identity = 221/345 (64.06%), Postives = 279/345 (80.87%), Query Frame = 1 

Query: 1   MSGLIEGLPDAISIRCLAFVPYYLHPKLELVSRSWKAAIRSTELFRARQEVGSSEDLLCV 60
           MS LIEGLPDA++IRC+A VP+YLHPKLE+VSRSW+AA+RSTELF+ARQEVGS+EDLLCV
Sbjct: 1   MSELIEGLPDAVAIRCIARVPFYLHPKLEVVSRSWQAAVRSTELFKARQEVGSAEDLLCV 60

Query: 61  CSYDPNNTWKLYDPLQNLWMTLPELPSKIKHLANFGVVSTSQKLFVLGGRGDAVDPVTGD 120
           C++DP N W+LYDPL++LW+TLP LPSKI+HLA+FGVV ++ KLFVLGG  DAVDP+TGD
Sbjct: 61  CAFDPENLWQLYDPLRDLWITLPILPSKIRHLAHFGVVCSAGKLFVLGGGSDAVDPLTGD 120

Query: 121 REETSSTNEVWSFDPVTRMWSMRAPMLVPRSMFACCVVDGKIVVAGGFTSLSKSTSQAEM 180
           ++ + +TNEVWS+DPV R W+ RA MLVPR+MFACC ++GKIVVAGGFTS  KS SQAEM
Sbjct: 121 QDGSFATNEVWSYDPVLREWAARASMLVPRAMFACCALNGKIVVAGGFTSCQKSISQAEM 180

Query: 181 YDIEKDVWIPLPDLLHTRDSTCIGLMIGGKMHIMYGGVSTVQVFDSLELKWRVEYYGWLP 240
           YD EKDVW+P+PDL  T +S C G++IGGK+H+++ G+STVQV DS+   W VE YGWL 
Sbjct: 181 YDPEKDVWVPIPDLHRTHNSACSGVVIGGKLHVLHRGLSTVQVLDSIGSGWTVEDYGWLQ 240

Query: 241 GHKAVVGGSLYTMSQGLVFKQEERGAQAVVSASQFVQRIGMAMVGFRGELYVIGGIVRPE 300
           G  AVV  +LY MS GL+ KQE +  + VVSAS+F +RIG AM G   E+YVIGG++ P+
Sbjct: 241 GPMAVVHDALYVMSHGLIVKQEGKTRKVVVSASEFRKRIGFAMTGLGDEMYVIGGVIGPD 300

Query: 301 RFDGDLVKLSDVHVLKVRNEKPSWYCAAPTSRCSGTILGCTVLRI 346
           R++ D+  +SDV +L V  E+P+W  A P +RC GTI GC  LRI
Sbjct: 301 RWNWDIKPVSDVDILTVGGERPTWRQATPMTRCRGTIRGCAQLRI 345

[Close]
BLAST of CmaCh17G011920 vs. TrEMBL
Match: V4TAE9_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10020951mg PE=4 SV=1)

HSP 1 Score: 476.9 bits (1226), Expect = 2.1e-131
Identity = 222/345 (64.35%), Postives = 278/345 (80.58%), Query Frame = 1 

Query: 1   MSGLIEGLPDAISIRCLAFVPYYLHPKLELVSRSWKAAIRSTELFRARQEVGSSEDLLCV 60
           MS LIEGLPDA+++RCLA VP++LHPKLELVSRSW+AAIRS ELF+ARQEVGSSE+LLCV
Sbjct: 1   MSELIEGLPDAVALRCLARVPFFLHPKLELVSRSWRAAIRSPELFKARQEVGSSENLLCV 60

Query: 61  CSYDPNNTWKLYDPLQNLWMTLPELPSKIKHLANFGVVSTSQKLFVLGGRGDAVDPVTGD 120
           C++DP N W+LYDPL++LW+TLP LPSKI+HLA+FGVVST+ KLFVLGG  DAVDP+TGD
Sbjct: 61  CAFDPENLWQLYDPLRDLWITLPVLPSKIRHLAHFGVVSTAGKLFVLGGGSDAVDPLTGD 120

Query: 121 REETSSTNEVWSFDPVTRMWSMRAPMLVPRSMFACCVVDGKIVVAGGFTSLSKSTSQAEM 180
           ++ + +TNEVWS+DPVTR WS RA MLVPR+MFACC +  KIVVAGGFTS  KS SQAEM
Sbjct: 121 QDGSFATNEVWSYDPVTRQWSPRASMLVPRAMFACCALKEKIVVAGGFTSCRKSISQAEM 180

Query: 181 YDIEKDVWIPLPDLLHTRDSTCIGLMIGGKMHIMYGGVSTVQVFDSLELKWRVEYYGWLP 240
           YD EKDVW+P+PDL  T +S C G++IGGK+H+++ G+STVQV D + L W VE YGWL 
Sbjct: 181 YDPEKDVWVPIPDLHRTHNSACTGVVIGGKVHVLHKGLSTVQVLDHMGLGWTVEDYGWLQ 240

Query: 241 GHKAVVGGSLYTMSQGLVFKQEERGAQAVVSASQFVQRIGMAMVGFRGELYVIGGIVRPE 300
           G  A+V  S+Y MS GL+ KQ     + V SAS+F +RIG AM+G   ++YVIGG++ P+
Sbjct: 241 GPMAIVHDSVYLMSHGLIIKQHRDVRKVVASASEFRRRIGFAMIGMGDDIYVIGGVIGPD 300

Query: 301 RFDGDLVKLSDVHVLKVRNEKPSWYCAAPTSRCSGTILGCTVLRI 346
           R++ D+  +SDV VL V  E+P+W   +P +RC GTILGCT LRI
Sbjct: 301 RWNWDIKPMSDVDVLTVGAERPTWRQVSPMTRCRGTILGCTQLRI 345

[Close]
BLAST of CmaCh17G011920 vs. TAIR10
Match: AT3G63220.2 (AT3G63220.2 Galactose oxidase/kelch repeat superfamily protein)

HSP 1 Score: 425.2 bits (1092), Expect = 3.7e-119
Identity = 199/345 (57.68%), Postives = 258/345 (74.78%), Query Frame = 1 

Query: 1   MSGLIEGLPDAISIRCLAFVPYYLHPKLELVSRSWKAAIRSTELFRARQEVGSSEDLLCV 60
           MSGL++G+P+A+++RCLA VP +LHP LELVSRSW+AAIRS ELFR R+E+ SSE LLCV
Sbjct: 8   MSGLLDGIPEAVALRCLAHVPLHLHPNLELVSRSWRAAIRSHELFRVRKELRSSEHLLCV 67

Query: 61  CSYDPNNTWKLYDPLQNLWMTLPELPSKIKHLANFGVVSTSQKLFVLGGRGDAVDPVTGD 120
           C++DP N W++Y P  + W+TLP LPS+I+HLA+FG V+T+  LFVLGG  DAV PVTGD
Sbjct: 68  CAFDPENIWQVYSPNCDRWLTLPLLPSRIRHLAHFGAVTTAGMLFVLGGGSDAVSPVTGD 127

Query: 121 REETSSTNEVWSFDPVTRMWSMRAPMLVPRSMFACCVVDGKIVVAGGFTSLSKSTSQAEM 180
            + T +T++VWS+D V R W+ RA MLVPR+MFACCV+ GKIVVAGGFT+  KS S AEM
Sbjct: 128 HDGTFATDQVWSYDFVQRQWTPRASMLVPRAMFACCVLQGKIVVAGGFTTCRKSISGAEM 187

Query: 181 YDIEKDVWIPLPDLLHTRDSTCIGLMIGGKMHIMYGGVSTVQVFDSLELKWRVEYYGWLP 240
           YD E DVW  +PDL  T +S C GL++ GK+H+++ G+STVQV +S++L W V+ YGW  
Sbjct: 188 YDPENDVWTSIPDLHQTHNSACSGLVVNGKVHVLHKGLSTVQVLESVKLGWDVKDYGWPQ 247

Query: 241 GHKAVVGGSLYTMSQGLVFKQEERGAQAVVSASQFVQRIGMAMVGFRGELYVIGGIVRPE 300
           G   VV   LY MS GLVFKQE    + V SAS+F +RIGMAM     E+ ++GG++ P+
Sbjct: 248 GPMVVVEDVLYVMSHGLVFKQEGDTWKMVASASEFKRRIGMAMTSLSDEVLIVGGVIGPD 307

Query: 301 RFDGDLVKLSDVHVLKVRNEKPSWYCAAPTSRCSGTILGCTVLRI 346
           R + D+  LSDV  L V N++P+W   AP +RC GTILGCT L I
Sbjct: 308 RLNWDIKPLSDVDALTVGNDRPAWRSVAPMTRCRGTILGCTQLTI 352

[Close]
BLAST of CmaCh17G011920 vs. TAIR10
Match: AT1G16250.1 (AT1G16250.1 Galactose oxidase/kelch repeat superfamily protein)

HSP 1 Score: 129.0 bits (323), Expect = 5.5e-30
Identity = 104/373 (27.88%), Postives = 159/373 (42.63%), Query Frame = 1 

Query: 4   LIEGLPDAISIRCLAFVPYYLHPKLELVSRSWKAAIRSTELFRARQEVGSSEDLLCVCSY 63
           +I GLPD +++RC+A + +  H  LE VSR W+  +R  +    +   G S   L V + 
Sbjct: 8   IIPGLPDDLALRCIAKLSHGYHGVLECVSRGWRDLVRGADYSCYKARNGWSGSWLFVLTE 67

Query: 64  DPNNTWKLYDPLQNLWMTLPELPSKIK--HLANFGVVSTSQKLFVLGGRGDAVDPVTGDR 123
              N W  YDP  + W  LP   +     H + F  V  S  L V+GG   A    +   
Sbjct: 68  RSKNQWVAYDPEADRWHPLPRTRAVQDGWHHSGFACVCVSNCLLVIGG-CYAPSVSSFPH 127

Query: 124 EETSSTNEVWSFDPVTRMWSMRAPMLVPRSMFACCVVDGKIVVAGGFT-SLSKSTSQAEM 183
           ++   T +V  FDP  + W M A M  PR+ FAC  V GK+ VAGG   + S+    AE+
Sbjct: 128 QKPVVTKDVMRFDPFKKQWKMVASMRTPRTHFACTSVSGKVYVAGGRNLTHSRGIPSAEV 187

Query: 184 YDIEKDVWIPLPDLLHTRDSTCIGLMIGGKMHIM-----YGGVSTVQVFDSLELKWRVEY 243
           YD   D W  LP +   +   C GL   G  H++     +   ++ +VF+  ++ W    
Sbjct: 188 YDPVADRWEELPAMPRPQ-MDCSGLSYRGCFHVLSDQVGFAEQNSSEVFNPRDMTWSTVE 247

Query: 244 YGWLPGHKA-------VVGGSLYTM-------------SQGLVFKQEERGAQAVVSASQF 303
             W P  +A       +    +YT+              +G  +      +  + +  + 
Sbjct: 248 DVW-PFSRAMQFAVQVMKNDRVYTIVDWGESLIKTRDTDEGEWYNVGSVPSVVLPNHPRE 307

Query: 304 VQRIGMAMVGFRGELYVIGGIVRPERFDG----DLVKLSDVHVLKVRNEKPSWYCAAPTS 344
           ++  G      R ELYVIGG V      G    D+V+L  V V    +   +W    P  
Sbjct: 308 LEAFGYGFAALRNELYVIGGKVLKWEESGAGRFDIVRLPVVRVCNPLDRPLNWRETKPMC 367

[Close]
BLAST of CmaCh17G011920 vs. TAIR10
Match: AT1G67480.1 (AT1G67480.1 Galactose oxidase/kelch repeat superfamily protein)

HSP 1 Score: 101.7 bits (252), Expect = 9.4e-22
Identity = 71/230 (30.87%), Postives = 105/230 (45.65%), Query Frame = 1 

Query: 4   LIEGLPDAISIRCLAFVPYYLHPKLELVSRSWKAAIRSTELFRARQEVGSSEDLLCVCSY 63
           LI GLPD ++ +CLA VP    P +  V + W+  ++S E    R+  G  E+ L V + 
Sbjct: 39  LIPGLPDDVAKQCLALVPRARFPSMGSVCKKWRFVVQSKEFITVRRLAGMLEEWLYVLTM 98

Query: 64  D---PNNTWKLYDPLQNLWMTLPELPSKIKHLANFGVVSTSQKLFVLGG----RGDAVDP 123
           +    +N W++ D L     +LP +P   K    F VV    KL V+ G     G  V  
Sbjct: 99  NAGGKDNRWEVMDCLGQKLSSLPPMPGPAK--TGFKVVVVDGKLLVIAGCCMINGSLV-- 158

Query: 124 VTGDREETSSTNEVWSFDPVTRMWSMRAPMLVPRSMFACCVVDGKIVVAGGFTSLSKSTS 183
                    ++ +V+ +D     WS  A + V R  FAC  V+G + V GG     +S S
Sbjct: 159 ---------ASADVYQYDTCLNSWSRLADLEVARYDFACAEVNGHVYVVGGHGVDGESLS 218

Query: 184 QAEMYDIEKDVWIPLPDLLHTRDSTCIGLMIGGKMHIMYGGVSTVQVFDS 227
            AE+YD E   W  +  L   R   C      GK+++M GG S   + +S
Sbjct: 219 SAEVYDPETCTWTFIESLRRPRWG-CFASAFNGKLYVM-GGRSNFTIGNS 253

[Close]
BLAST of CmaCh17G011920 vs. TAIR10
Match: AT1G55270.1 (AT1G55270.1 Galactose oxidase/kelch repeat superfamily protein)

HSP 1 Score: 101.3 bits (251), Expect = 1.2e-21
Identity = 60/195 (30.77%), Postives = 93/195 (47.69%), Query Frame = 1 

Query: 4   LIEGLPDAISIRCLAFVPYYLHPKLELVSRSWKAAIRSTELFRARQEVGSSEDLLCVCSY 63
           L+ GLPD +++ CL  VP   H KL LV + W         +  R+ +G SE+ + V   
Sbjct: 78  LLPGLPDDLAVACLIRVPRAEHRKLRLVCKRWYRLASGNFFYSQRKLLGMSEEWVYVFKR 137

Query: 64  DPNN--TWKLYDPLQNLWMTLPELPSKIKHLANFG-VVSTSQKLFVLGGRGDAVDPVTGD 123
           D +   +W  +DP+  LW  LP +P +      FG  V +   L++ GG+    DP+ G 
Sbjct: 138 DRDGKISWNTFDPISQLWQPLPPVPREYSEAVGFGCAVLSGCHLYLFGGK----DPLRG- 197

Query: 124 REETSSTNEVWSFDPVTRMWSMRAPMLVPRSMFACCVVDGKIVVAGG-FTSLSKSTSQAE 183
                S   V  ++  T  W     ML  R  F CCV++  + VAGG    + ++   AE
Sbjct: 198 -----SMRRVIFYNARTNKWHRAPDMLRKRHFFGCCVINNCLYVAGGECEGIQRTLRSAE 257

Query: 184 MYDIEKDVWIPLPDL 195
           +YD  K+ W  + D+
Sbjct: 258 VYDPNKNRWSFIADM 262

[Close]
BLAST of CmaCh17G011920 vs. TAIR10
Match: AT5G60570.1 (AT5G60570.1 Galactose oxidase/kelch repeat superfamily protein)

HSP 1 Score: 99.0 bits (245), Expect = 6.1e-21
Identity = 71/238 (29.83%), Postives = 113/238 (47.48%), Query Frame = 1 

Query: 4   LIEGLPDAISIRCLAFVPYYLHPKLELVSRSWKAAIRSTELFRARQEVGSSEDLL-CVCS 63
           ++ GL D +++ CLA+VP   +P L  V++ +   I S  LF  R+E+G  E L+  VC 
Sbjct: 49  VLPGLIDDVALNCLAWVPRSDYPSLSCVNKKYNKLINSGHLFALRKELGIVEYLVFMVC- 108

Query: 64  YDPNNTWKLYDPLQNLWMTLPELP-SKIKHLANFGVVSTSQKLFVLGGRGDAVDPVTGDR 123
            DP   W ++ P++  WM LP++P  +  + A+   ++   +L V G            R
Sbjct: 109 -DPRG-WLMFSPMKKKWMVLPKMPCDECFNHADKESLAVDDELLVFG------------R 168

Query: 124 EETSSTNEVWSFDPVTRMWSMRAPMLVPRSMFACCVVDGKIVVAGGFTSLSKSTSQAEMY 183
           E       +W +   +R W     M  PR +FA   + G  +VAGG        + AE+Y
Sbjct: 169 ELFQFA--IWKYSLRSRCWVKCEGMHRPRCLFASGSLGGIAIVAGGTDMNGNILASAELY 228

Query: 184 DIEKDVWIPLPDLLHTRDSTCIGLMIGGKMHIMYGGVSTVQV-------FDSLELKWR 233
           D     W  LP+ +H+    C G  + GK +++ GG+S+  V       FD    KWR
Sbjct: 229 DSSSGRWEMLPN-MHSPRRLCSGFFMDGKFYVI-GGMSSPNVSVTFGEEFDLETRKWR 267

[Close]
BLAST of CmaCh17G011920 vs. NCBI nr
Match: gi|659100898|ref|XP_008451324.1| (PREDICTED: F-box/kelch-repeat protein SKIP30-like [Cucumis melo])

HSP 1 Score: 556.2 bits (1432), Expect = 4.0e-155
Identity = 268/347 (77.23%), Postives = 295/347 (85.01%), Query Frame = 1 

Query: 1   MSGLIEGLPDAISIRCLAFVPYYLHPKLELVSRSWKAAIRSTELFRARQEVGSSEDLLCV 60
           MSGLIEGLPDAIS+RCLA++PYYLHPKL LVSRSWKAAIRS ELFRARQEVG SED LCV
Sbjct: 1   MSGLIEGLPDAISLRCLAYIPYYLHPKLALVSRSWKAAIRSVELFRARQEVGFSEDFLCV 60

Query: 61  CSYDPNNTWKLYDPLQNLWMTLPELPSKIKHLANFGVVSTSQKLFVLGGRGDAVDPVTGD 120
           CSY PNNTW+LYDPL N WMTLPELPSK  HL NF  VSTSQKLFVLGGR  AVDPVTGD
Sbjct: 61  CSYHPNNTWQLYDPLPNHWMTLPELPSKRMHLGNFCTVSTSQKLFVLGGRSIAVDPVTGD 120

Query: 121 REETSSTNEVWSFDPVTRMWSMRAPMLVPRSMFACCVVDGKIVVAGGFTSLSKSTSQAEM 180
           R++  STNEVWSFDP+TRMWSMRAPMLVPR+MFACCVVDGKI+VAGGFTS SKSTS+AEM
Sbjct: 121 RDDNFSTNEVWSFDPITRMWSMRAPMLVPRAMFACCVVDGKIIVAGGFTSKSKSTSKAEM 180

Query: 181 YDIEKDVWIPLPDLLHTRDSTCIGLMIGGKMHIMYGGVSTVQVFDSLELKWRVEYYGWLP 240
           YD EKDVW  LPDLL T DSTC G +I GKMHI+Y GVSTVQV DSLE+KWRVE YGWLP
Sbjct: 181 YDSEKDVWTLLPDLLQTHDSTCNGWVIRGKMHIVYNGVSTVQVLDSLEMKWRVEDYGWLP 240

Query: 241 GHKAVVGGSLYTMS--QGLVFKQEERGAQAVVSASQFVQRIGMAMVGFRGELYVIGGIVR 300
           G KAVVG SLY MS  QG+VFKQ  R  +  V A+QF+QRIGMA+VGFRG+LY IGG++ 
Sbjct: 241 GLKAVVGDSLYVMSLTQGVVFKQYGRAWKVFVLATQFLQRIGMAVVGFRGDLYAIGGVIH 300

Query: 301 PERFDGDLVKLSDVHVLKVRNEKPSWYCAAPTSRCSGTILGCTVLRI 346
           P R  GDL KLSDVHVL +R+E+P+W+ AA  SRC GT+LGCT LRI
Sbjct: 301 PNRTGGDLTKLSDVHVLNLRDEEPTWHSAAQMSRCQGTVLGCTELRI 347

[Close]
BLAST of CmaCh17G011920 vs. NCBI nr
Match: gi|449458480|ref|XP_004146975.1| (PREDICTED: F-box/kelch-repeat protein SKIP30-like [Cucumis sativus])

HSP 1 Score: 554.3 bits (1427), Expect = 1.5e-154
Identity = 265/347 (76.37%), Postives = 294/347 (84.73%), Query Frame = 1 

Query: 1   MSGLIEGLPDAISIRCLAFVPYYLHPKLELVSRSWKAAIRSTELFRARQEVGSSEDLLCV 60
           MSGLIEGLPDAIS+RCLA++PYYLHPKLELVSRSWKAAIRS ELFRARQEVG SED LCV
Sbjct: 1   MSGLIEGLPDAISLRCLAYIPYYLHPKLELVSRSWKAAIRSVELFRARQEVGFSEDFLCV 60

Query: 61  CSYDPNNTWKLYDPLQNLWMTLPELPSKIKHLANFGVVSTSQKLFVLGGRGDAVDPVTGD 120
           CSY PNNTW+LYDPL N WMTLPELPSK  HL NF  VSTSQKLFVLGGR DAVDPVTGD
Sbjct: 61  CSYHPNNTWQLYDPLPNRWMTLPELPSKRMHLGNFCAVSTSQKLFVLGGRSDAVDPVTGD 120

Query: 121 REETSSTNEVWSFDPVTRMWSMRAPMLVPRSMFACCVVDGKIVVAGGFTSLSKSTSQAEM 180
           R++  STNEVWSFDP+TR WSMRAPMLVPR+MFACCVVDGKI+VAGGFTS SKSTS+AEM
Sbjct: 121 RDDNFSTNEVWSFDPITRTWSMRAPMLVPRAMFACCVVDGKIIVAGGFTSKSKSTSKAEM 180

Query: 181 YDIEKDVWIPLPDLLHTRDSTCIGLMIGGKMHIMYGGVSTVQVFDSLELKWRVEYYGWLP 240
           YD EKDVW PLPDLL T DSTCIGL++ GKMHI+Y  VSTVQV DS E+KWRVE YGW+ 
Sbjct: 181 YDSEKDVWTPLPDLLQTHDSTCIGLVVRGKMHIVYNKVSTVQVLDSSEMKWRVEDYGWVL 240

Query: 241 GHKAVVGGSLYTMS--QGLVFKQEERGAQAVVSASQFVQRIGMAMVGFRGELYVIGGIVR 300
           G KAVVG SLY M+  +G+VFKQ  R  + +  A+QF QRIGMA+VGFRG+LY IGG + 
Sbjct: 241 GLKAVVGDSLYVMNPLEGVVFKQYGRTWKVIALATQFAQRIGMAVVGFRGDLYAIGGGIH 300

Query: 301 PERFDGDLVKLSDVHVLKVRNEKPSWYCAAPTSRCSGTILGCTVLRI 346
           P R  GDL KLSDVHVL +R+E+P+W CAA  SRC GT+LGCT LRI
Sbjct: 301 PNRTGGDLTKLSDVHVLNLRDEEPTWRCAAQMSRCQGTVLGCTELRI 347

[Close]
BLAST of CmaCh17G011920 vs. NCBI nr
Match: gi|255567564|ref|XP_002524761.1| (PREDICTED: F-box/kelch-repeat protein SKIP30 [Ricinus communis])

HSP 1 Score: 479.2 bits (1232), Expect = 6.2e-132
Identity = 224/345 (64.93%), Postives = 279/345 (80.87%), Query Frame = 1 

Query: 1   MSGLIEGLPDAISIRCLAFVPYYLHPKLELVSRSWKAAIRSTELFRARQEVGSSEDLLCV 60
           MS LIEGLPDAI+IRC+A VP+YLHPKLELVS SW++AIRS ELF+ARQEVGS+EDLLCV
Sbjct: 1   MSELIEGLPDAIAIRCIARVPFYLHPKLELVSHSWRSAIRSPELFKARQEVGSAEDLLCV 60

Query: 61  CSYDPNNTWKLYDPLQNLWMTLPELPSKIKHLANFGVVSTSQKLFVLGGRGDAVDPVTGD 120
           C+++P N W+LYDPL++LW+TLP LPSKI+HLA+FGVVST+ KL+VLGG  DAVDP+TGD
Sbjct: 61  CAFEPENLWQLYDPLRDLWITLPVLPSKIRHLAHFGVVSTAGKLYVLGGGSDAVDPLTGD 120

Query: 121 REETSSTNEVWSFDPVTRMWSMRAPMLVPRSMFACCVVDGKIVVAGGFTSLSKSTSQAEM 180
           ++   +TNEVWS+DPV R W++RA MLVPR+MFACCV+ GKIVVAGGFTS  KS SQAEM
Sbjct: 121 QDGNFATNEVWSYDPVIRQWALRASMLVPRAMFACCVLKGKIVVAGGFTSCRKSISQAEM 180

Query: 181 YDIEKDVWIPLPDLLHTRDSTCIGLMIGGKMHIMYGGVSTVQVFDSLELKWRVEYYGWLP 240
           YD EKDVWIP+PDL  T +S C G++IGGK+HI++ G+S VQV D++   W VE Y WL 
Sbjct: 181 YDPEKDVWIPIPDLHRTHNSACSGIVIGGKVHILHKGLSAVQVLDNVGAGWTVEDYNWLQ 240

Query: 241 GHKAVVGGSLYTMSQGLVFKQEERGAQAVVSASQFVQRIGMAMVGFRGELYVIGGIVRPE 300
           G  AVV G+LY MS GL+ KQE +  + VVSAS+F +RIG AM G   ++YVIGG++ P+
Sbjct: 241 GPMAVVHGALYVMSHGLICKQEGKVRKVVVSASEFRRRIGFAMTGLGDDIYVIGGVIGPD 300

Query: 301 RFDGDLVKLSDVHVLKVRNEKPSWYCAAPTSRCSGTILGCTVLRI 346
           R++ D+  +SDV +L V  E+P+W  AAP SRC GTILGC  LRI
Sbjct: 301 RWNWDIKPMSDVDILAVGGERPTWRQAAPMSRCRGTILGCAQLRI 345

[Close]
BLAST of CmaCh17G011920 vs. NCBI nr
Match: gi|359479633|ref|XP_003632309.1| (PREDICTED: F-box/kelch-repeat protein SKIP30 [Vitis vinifera])

HSP 1 Score: 478.8 bits (1231), Expect = 8.1e-132
Identity = 216/345 (62.61%), Postives = 280/345 (81.16%), Query Frame = 1 

Query: 1   MSGLIEGLPDAISIRCLAFVPYYLHPKLELVSRSWKAAIRSTELFRARQEVGSSEDLLCV 60
           MSGLIEGLPDA+++RCLA+VP+YLHP+LELVSRSW+ AIR  ELF+ARQEVGSSEDLLCV
Sbjct: 1   MSGLIEGLPDAVALRCLAWVPFYLHPRLELVSRSWRDAIRGPELFKARQEVGSSEDLLCV 60

Query: 61  CSYDPNNTWKLYDPLQNLWMTLPELPSKIKHLANFGVVSTSQKLFVLGGRGDAVDPVTGD 120
           C++DP N W+LYDP ++LW++LP LPS+I+HLA+FG VST+ KLFVLGG  DAVDP+TGD
Sbjct: 61  CAFDPENLWQLYDPRKDLWISLPVLPSRIRHLAHFGAVSTAGKLFVLGGGSDAVDPLTGD 120

Query: 121 REETSSTNEVWSFDPVTRMWSMRAPMLVPRSMFACCVVDGKIVVAGGFTSLSKSTSQAEM 180
           ++ + +TNEVWS+DP+ R W+ RAPMLVPR+MFACCV+DGKIVVAGGFTS  KS SQAE+
Sbjct: 121 QDGSFATNEVWSYDPIIRQWAPRAPMLVPRAMFACCVLDGKIVVAGGFTSCRKSISQAEI 180

Query: 181 YDIEKDVWIPLPDLLHTRDSTCIGLMIGGKMHIMYGGVSTVQVFDSLELKWRVEYYGWLP 240
           YD EKD W+ +PDL  T +S C G+++ GK+H+++ G++TVQ+ D +   WRVE YGWL 
Sbjct: 181 YDPEKDAWVSIPDLHRTHNSACSGVVLDGKVHVLHKGLTTVQILDKVGPGWRVEDYGWLQ 240

Query: 241 GHKAVVGGSLYTMSQGLVFKQEERGAQAVVSASQFVQRIGMAMVGFRGELYVIGGIVRPE 300
           G  A+V G+LY MS G++FKQE    + VVSAS+F +RIG AM G R E+YVIGG++ P+
Sbjct: 241 GPMAIVQGALYVMSHGIIFKQEREVKKMVVSASEFRRRIGFAMTGLRDEIYVIGGVIGPD 300

Query: 301 RFDGDLVKLSDVHVLKVRNEKPSWYCAAPTSRCSGTILGCTVLRI 346
           R++ D+  LSDV VL + +E+P+W   +P S+C GTI GCT LRI
Sbjct: 301 RWNWDIKPLSDVDVLTIGSERPAWRQVSPMSQCRGTIFGCTQLRI 345

[Close]
BLAST of CmaCh17G011920 vs. NCBI nr
Match: gi|224062428|ref|XP_002300832.1| (kelch repeat-containing F-box family protein [Populus trichocarpa])

HSP 1 Score: 477.6 bits (1228), Expect = 1.8e-131
Identity = 221/345 (64.06%), Postives = 279/345 (80.87%), Query Frame = 1 

Query: 1   MSGLIEGLPDAISIRCLAFVPYYLHPKLELVSRSWKAAIRSTELFRARQEVGSSEDLLCV 60
           MS LIEGLPDA++IRC+A VP+YLHPKLE+VSRSW+AA+RSTELF+ARQEVGS+EDLLCV
Sbjct: 1   MSELIEGLPDAVAIRCIARVPFYLHPKLEVVSRSWQAAVRSTELFKARQEVGSAEDLLCV 60

Query: 61  CSYDPNNTWKLYDPLQNLWMTLPELPSKIKHLANFGVVSTSQKLFVLGGRGDAVDPVTGD 120
           C++DP N W+LYDPL++LW+TLP LPSKI+HLA+FGVV ++ KLFVLGG  DAVDP+TGD
Sbjct: 61  CAFDPENLWQLYDPLRDLWITLPILPSKIRHLAHFGVVCSAGKLFVLGGGSDAVDPLTGD 120

Query: 121 REETSSTNEVWSFDPVTRMWSMRAPMLVPRSMFACCVVDGKIVVAGGFTSLSKSTSQAEM 180
           ++ + +TNEVWS+DPV R W+ RA MLVPR+MFACC ++GKIVVAGGFTS  KS SQAEM
Sbjct: 121 QDGSFATNEVWSYDPVLREWAARASMLVPRAMFACCALNGKIVVAGGFTSCQKSISQAEM 180

Query: 181 YDIEKDVWIPLPDLLHTRDSTCIGLMIGGKMHIMYGGVSTVQVFDSLELKWRVEYYGWLP 240
           YD EKDVW+P+PDL  T +S C G++IGGK+H+++ G+STVQV DS+   W VE YGWL 
Sbjct: 181 YDPEKDVWVPIPDLHRTHNSACSGVVIGGKLHVLHRGLSTVQVLDSIGSGWTVEDYGWLQ 240

Query: 241 GHKAVVGGSLYTMSQGLVFKQEERGAQAVVSASQFVQRIGMAMVGFRGELYVIGGIVRPE 300
           G  AVV  +LY MS GL+ KQE +  + VVSAS+F +RIG AM G   E+YVIGG++ P+
Sbjct: 241 GPMAVVHDALYVMSHGLIVKQEGKTRKVVVSASEFRKRIGFAMTGLGDEMYVIGGVIGPD 300

Query: 301 RFDGDLVKLSDVHVLKVRNEKPSWYCAAPTSRCSGTILGCTVLRI 346
           R++ D+  +SDV +L V  E+P+W  A P +RC GTI GC  LRI
Sbjct: 301 RWNWDIKPVSDVDILTVGGERPTWRQATPMTRCRGTIRGCAQLRI 345

The following BLAST results are available for this feature:
BLAST of CmaCh17G011920 vs. Swiss-Prot
Match NameE-valueIdentityDescription
SKI30_ARATH6.6e-11857.68F-box/kelch-repeat protein SKIP30 OS=Arabidopsis thaliana GN=SKIP30 PE=1 SV=2[more]
FBK5_ARATH9.8e-2927.88F-box/kelch-repeat protein At1g16250 OS=Arabidopsis thaliana GN=At1g16250 PE=2 S... [more]
FBK28_ARATH1.7e-2030.87F-box/kelch-repeat protein At1g67480 OS=Arabidopsis thaliana GN=At1g67480 PE=2 S... [more]
FBK22_ARATH2.2e-2030.77F-box/kelch-repeat protein At1g55270 OS=Arabidopsis thaliana GN=At1g55270 PE=2 S... [more]
FK132_ARATH1.1e-1929.83F-box/kelch-repeat protein At5g60570 OS=Arabidopsis thaliana GN=At5g60570 PE=2 S... [more]
BLAST of CmaCh17G011920 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K7B1_CUCSA1.1e-15476.37Uncharacterized protein OS=Cucumis sativus GN=Csa_7G387780 PE=4 SV=1[more]
B9SFJ2_RICCO4.3e-13264.93Protein AFR, putative OS=Ricinus communis GN=RCOM_0646580 PE=4 SV=1[more]
F6HI50_VITVI5.6e-13262.61Putative uncharacterized protein OS=Vitis vinifera GN=VIT_07s0151g00770 PE=4 SV=... [more]
B9GSL6_POPTR1.3e-13164.06Kelch repeat-containing F-box family protein OS=Populus trichocarpa GN=POPTR_000... [more]
V4TAE9_9ROSI2.1e-13164.35Uncharacterized protein OS=Citrus clementina GN=CICLE_v10020951mg PE=4 SV=1[more]
BLAST of CmaCh17G011920 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G63220.23.7e-11957.68 Galactose oxidase/kelch repeat superfamily protein[more]
AT1G16250.15.5e-3027.88 Galactose oxidase/kelch repeat superfamily protein[more]
AT1G67480.19.4e-2230.87 Galactose oxidase/kelch repeat superfamily protein[more]
AT1G55270.11.2e-2130.77 Galactose oxidase/kelch repeat superfamily protein[more]
AT5G60570.16.1e-2129.83 Galactose oxidase/kelch repeat superfamily protein[more]
BLAST of CmaCh17G011920 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659100898|ref|XP_008451324.1|4.0e-15577.23PREDICTED: F-box/kelch-repeat protein SKIP30-like [Cucumis melo][more]
gi|449458480|ref|XP_004146975.1|1.5e-15476.37PREDICTED: F-box/kelch-repeat protein SKIP30-like [Cucumis sativus][more]
gi|255567564|ref|XP_002524761.1|6.2e-13264.93PREDICTED: F-box/kelch-repeat protein SKIP30 [Ricinus communis][more]
gi|359479633|ref|XP_003632309.1|8.1e-13262.61PREDICTED: F-box/kelch-repeat protein SKIP30 [Vitis vinifera][more]
gi|224062428|ref|XP_002300832.1|1.8e-13164.06kelch repeat-containing F-box family protein [Populus trichocarpa][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR006652Kelch_1
IPR015916Galactose oxidase, beta-propeller
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009062 fatty acid catabolic process
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0005515 protein binding
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh17G011920.1CmaCh17G011920.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006652Kelch repeat type 1PFAMPF01344Kelch_1coord: 149..194
score: 8.8E-13coord: 92..146
score: 9.
IPR006652Kelch repeat type 1SMARTSM00612kelc_smartcoord: 103..160
score: 7.2E-8coord: 161..208
score: 9.
IPR015916Galactose oxidase, beta-propellerGENE3DG3DSA:2.130.10.80coord: 30..232
score: 1.5
NoneNo IPR availablePANTHERPTHR24414FAMILY NOT NAMEDcoord: 1..345
score: 2.0
NoneNo IPR availablePANTHERPTHR24414:SF29SEGMENTATION PROTEIN CAP'N'COLLARcoord: 1..345
score: 2.0
NoneNo IPR availableunknownSSF117281Kelch motifcoord: 60..333
score: 9.02

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmaCh17G011920Cucsa.084310Cucumber (Gy14) v1cgycmaB0157
CmaCh17G011920Cla006046Watermelon (97103) v1cmawmB343
CmaCh17G011920Cla014778Watermelon (97103) v1cmawmB328
CmaCh17G011920Csa7G387780Cucumber (Chinese Long) v2cmacuB388
CmaCh17G011920MELO3C015811Melon (DHL92) v3.5.1cmameB327
CmaCh17G011920ClCG09G007230Watermelon (Charleston Gray)cmawcgB306
CmaCh17G011920ClCG07G000360Watermelon (Charleston Gray)cmawcgB331
CmaCh17G011920CSPI07G16180Wild cucumber (PI 183967)cmacpiB392
CmaCh17G011920CmoCh19G000290Cucurbita moschata (Rifu)cmacmoB356
CmaCh17G011920CmoCh17G011700Cucurbita moschata (Rifu)cmacmoB353
CmaCh17G011920Lsi05G009430Bottle gourd (USVL1VR-Ls)cmalsiB354
CmaCh17G011920Lsi02G022730Bottle gourd (USVL1VR-Ls)cmalsiB348
CmaCh17G011920Cp4.1LG15g00300Cucurbita pepo (Zucchini)cmacpeB374
CmaCh17G011920MELO3C015811.2Melon (DHL92) v3.6.1cmamedB380
CmaCh17G011920CsaV3_7G027930Cucumber (Chinese Long) v3cmacucB0462
CmaCh17G011920Cla97C09G169830Watermelon (97103) v2cmawmbB386
CmaCh17G011920Cla97C07G128620Watermelon (97103) v2cmawmbB381
CmaCh17G011920Bhi09G000889Wax gourdcmawgoB0496
CmaCh17G011920Bhi05G000231Wax gourdcmawgoB0482
CmaCh17G011920CsGy7G014660Cucumber (Gy14) v2cgybcmaB926
CmaCh17G011920Carg16834Silver-seed gourdcarcmaB1048
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CmaCh17G011920Cucurbita moschata (Rifu)cmacmoB364
CmaCh17G011920Cucurbita moschata (Rifu)cmacmoB374
CmaCh17G011920Cucurbita moschata (Rifu)cmacmoB384
CmaCh17G011920Wild cucumber (PI 183967)cmacpiB368
CmaCh17G011920Cucumber (Chinese Long) v2cmacuB364
CmaCh17G011920Melon (DHL92) v3.5.1cmameB346
CmaCh17G011920Watermelon (97103) v1cmawmB346
CmaCh17G011920Cucurbita pepo (Zucchini)cmacpeB371
CmaCh17G011920Cucurbita pepo (Zucchini)cmacpeB376
CmaCh17G011920Cucurbita pepo (Zucchini)cmacpeB386
CmaCh17G011920Cucurbita pepo (Zucchini)cmacpeB401
CmaCh17G011920Cucurbita pepo (Zucchini)cmacpeB408
CmaCh17G011920Bottle gourd (USVL1VR-Ls)cmalsiB337
CmaCh17G011920Bottle gourd (USVL1VR-Ls)cmalsiB355
CmaCh17G011920Cucumber (Gy14) v2cgybcmaB349
CmaCh17G011920Melon (DHL92) v3.6.1cmamedB399
CmaCh17G011920Silver-seed gourdcarcmaB0069
CmaCh17G011920Silver-seed gourdcarcmaB0142
CmaCh17G011920Silver-seed gourdcarcmaB0456
CmaCh17G011920Silver-seed gourdcarcmaB1176
CmaCh17G011920Cucumber (Chinese Long) v3cmacucB0431
CmaCh17G011920Watermelon (97103) v2cmawmbB367
CmaCh17G011920Watermelon (97103) v2cmawmbB373
CmaCh17G011920Wax gourdcmawgoB0479
CmaCh17G011920Wax gourdcmawgoB0489
CmaCh17G011920Cucurbita maxima (Rimu)cmacmaB248
CmaCh17G011920Cucurbita maxima (Rimu)cmacmaB363
CmaCh17G011920Cucurbita maxima (Rimu)cmacmaB372
CmaCh17G011920Cucurbita maxima (Rimu)cmacmaB382