CmaCh17G010930 (gene) Cucurbita maxima (Rimu)
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CAACAATCCCAAAAAACAGGCGGCGTTCTGGAATCGTTTGGCGGCGATGGCGGTAGAGGCGGCGAAGCCAGTGATGGTGATCGGAATCGACGACAGCGAACACGCAGTTTCCGCTCTGGAGTGGACATTGGACAAATTTTTTTCTCGAACAGTACGATTACAACCGTTTAAGCTTGTCGTTGTTCATGTCAAACCATCTCCCGACGTCTTCGTCGGCGTCTCCGGACCAGGAAGTAAGAACGATCCTCCTTCTCTCTGCTATTTACTTTCAAACAGAAATCGTTCCAAATCTATAATCGAGTTTTTAAAGAGACGACTAATGAACTCGGAATCTACAATCAGGAATTGCAGGATCGGTTGAAACCTACCAAGCTCTGGATGATGATTTGAAGAGAAAAGCTGCGAGAACTATCGAACTTGCCAGAGAAATTTGCGCTGCGAAATCGGTAACGGTGGAGTTTAGATTTCTCGATTTACCTTATTTCAGTCTTTTGAATCGCGGATTGAATGGATACGAACTTGTGATGATTCTCAAATGCGATCCAATTGTAAATCCTAGATTGAGAAAGTAGAAATCGTGTAGATCGATTTAAGAATCTGTAAAGAACAGAGAGCACTAGCAATGGAGTTGAATTGCAGGTTTTTGATGGTGAATTCGAGGTTGAAGAAGGAGATGCAAGGTATGTACTGTGCGAGGCGGCTAATAAGCACCGGGCTTCAGTGATCGTAGTAGGAAGCCGTGGCCATGGAGCTATTAAACGGTACTTTCTCCAGAACTAGTAAATTTTTGTCTCTTTGTTTAATTTCGGTGTGTGGATGTGGATGTATGAGTACCTATCAGAACATTTTGCAATTGGGTATCATATTTCTTTTGGTCGTTGTATTTCACTACAACAATAGGTATCATATTTGAAGGTTAATGGGTATCATATTTGAAGTGTGTGGCGGTTGGTTGAACACGATTCTTCAGCAACAGGATCCACAATCGTATGATATGTTCCACTTTGAGTCTAAGCTCACGTAATTTTGTTTTAGGCTTCTATAACACCATGACGTAAAACAATCTATAACACCTTGACTCACTTGAATGATTGCTTAATTAAAAATTTTAGTCCAAAATTGTAATGGGAGTTCATAGTAATGCAGGGCTTTGATGGGAAGTGTGAGTGACTATTGCGCACATCAAGCACCTTGCAGTGTCATGATTGTGAAGATGAAGGAGCGTAGCAACAAAAACAGTGCTTAAATAAATCAAAATCTGTATTTCTGTTTGTATTTCTGAATGTTATTGTATTTTTAAGATGGGATACTTAAAAATTATTTAATCTTTTTAATTTTCTTTTTAAGGCATTTCTGACTTTAATTTAAATATATATATAAAAACTTTTTGGTTTATTA CAACAATCCCAAAAAACAGGCGGCGTTCTGGAATCGTTTGGCGGCGATGGCGGTAGAGGCGGCGAAGCCAGTGATGGTGATCGGAATCGACGACAGCGAACACGCAGTTTCCGCTCTGGAGTGGACATTGGACAAATTTTTTTCTCGAACAGTACGATTACAACCGTTTAAGCTTGTCGTTGTTCATGTCAAACCATCTCCCGACGTCTTCGTCGGCGTCTCCGGACCAGGAAGAATTGCAGGATCGGTTGAAACCTACCAAGCTCTGGATGATGATTTGAAGAGAAAAGCTGCGAGAACTATCGAACTTGCCAGAGAAATTTGCGCTGCGAAATCGGTTTTTGATGGTGAATTCGAGGTTGAAGAAGGAGATGCAAGGGCTTTGATGGGAAGTGTGAGTGACTATTGCGCACATCAAGCACCTTGCAGTGTCATGATTGTGAAGATGAAGGAGCGTAGCAACAAAAACAGTGCTTAAATAAATCAAAATCTGTATTTCTGTTTGTATTTCTGAATGTTATTGTATTTTTAAGATGGGATACTTAAAAATTATTTAATCTTTTTAATTTTCTTTTTAAGGCATTTCTGACTTTAATTTAAATATATATATAAAAACTTTTTGGTTTATTA ATGGCGGTAGAGGCGGCGAAGCCAGTGATGGTGATCGGAATCGACGACAGCGAACACGCAGTTTCCGCTCTGGAGTGGACATTGGACAAATTTTTTTCTCGAACAGTACGATTACAACCGTTTAAGCTTGTCGTTGTTCATGTCAAACCATCTCCCGACGTCTTCGTCGGCGTCTCCGGACCAGGAAGAATTGCAGGATCGGTTGAAACCTACCAAGCTCTGGATGATGATTTGAAGAGAAAAGCTGCGAGAACTATCGAACTTGCCAGAGAAATTTGCGCTGCGAAATCGGTTTTTGATGGTGAATTCGAGGTTGAAGAAGGAGATGCAAGGGCTTTGATGGGAAGTGTGAGTGACTATTGCGCACATCAAGCACCTTGCAGTGTCATGATTGTGAAGATGAAGGAGCGTAGCAACAAAAACAGTGCTTAA MAVEAAKPVMVIGIDDSEHAVSALEWTLDKFFSRTVRLQPFKLVVVHVKPSPDVFVGVSGPGRIAGSVETYQALDDDLKRKAARTIELAREICAAKSVFDGEFEVEEGDARALMGSVSDYCAHQAPCSVMIVKMKERSNKNSA
BLAST of CmaCh17G010930 vs. TrEMBL
Match: A0A0A0KAW4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G397000 PE=4 SV=1) HSP 1 Score: 201.1 bits (510), Expect = 9.4e-49 Identity = 106/161 (65.84%), Postives = 120/161 (74.53%), Query Frame = 1
BLAST of CmaCh17G010930 vs. TrEMBL
Match: A0A0A0K987_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G397010 PE=4 SV=1) HSP 1 Score: 154.8 bits (390), Expect = 7.7e-35 Identity = 89/160 (55.62%), Postives = 103/160 (64.38%), Query Frame = 1
BLAST of CmaCh17G010930 vs. TrEMBL
Match: A0A0A0K632_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G397020 PE=4 SV=1) HSP 1 Score: 148.3 bits (373), Expect = 7.2e-33 Identity = 79/162 (48.77%), Postives = 102/162 (62.96%), Query Frame = 1
BLAST of CmaCh17G010930 vs. TrEMBL
Match: V4SIV6_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10029382mg PE=4 SV=1) HSP 1 Score: 134.8 bits (338), Expect = 8.2e-29 Identity = 75/156 (48.08%), Postives = 93/156 (59.62%), Query Frame = 1
BLAST of CmaCh17G010930 vs. TrEMBL
Match: B9SAP9_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1177920 PE=4 SV=1) HSP 1 Score: 133.3 bits (334), Expect = 2.4e-28 Identity = 78/156 (50.00%), Postives = 93/156 (59.62%), Query Frame = 1
BLAST of CmaCh17G010930 vs. TAIR10
Match: AT2G47710.1 (AT2G47710.1 Adenine nucleotide alpha hydrolases-like superfamily protein) HSP 1 Score: 120.6 bits (301), Expect = 8.1e-28 Identity = 70/160 (43.75%), Postives = 88/160 (55.00%), Query Frame = 1
BLAST of CmaCh17G010930 vs. TAIR10
Match: AT5G49050.1 (AT5G49050.1 FUNCTIONS IN: molecular_function unknown) HSP 1 Score: 79.7 bits (195), Expect = 1.6e-15 Identity = 44/106 (41.51%), Postives = 63/106 (59.43%), Query Frame = 1
BLAST of CmaCh17G010930 vs. TAIR10
Match: AT1G09740.1 (AT1G09740.1 Adenine nucleotide alpha hydrolases-like superfamily protein) HSP 1 Score: 63.5 bits (153), Expect = 1.2e-10 Identity = 53/172 (30.81%), Postives = 77/172 (44.77%), Query Frame = 1
BLAST of CmaCh17G010930 vs. TAIR10
Match: AT3G62550.1 (AT3G62550.1 Adenine nucleotide alpha hydrolases-like superfamily protein) HSP 1 Score: 50.8 bits (120), Expect = 7.9e-07 Identity = 46/168 (27.38%), Postives = 73/168 (43.45%), Query Frame = 1
BLAST of CmaCh17G010930 vs. NCBI nr
Match: gi|659101384|ref|XP_008451577.1| (PREDICTED: universal stress protein A-like protein isoform X3 [Cucumis melo]) HSP 1 Score: 205.3 bits (521), Expect = 7.1e-50 Identity = 106/161 (65.84%), Postives = 121/161 (75.16%), Query Frame = 1
BLAST of CmaCh17G010930 vs. NCBI nr
Match: gi|700189703|gb|KGN44936.1| (hypothetical protein Csa_7G397000 [Cucumis sativus]) HSP 1 Score: 201.1 bits (510), Expect = 1.3e-48 Identity = 106/161 (65.84%), Postives = 120/161 (74.53%), Query Frame = 1
BLAST of CmaCh17G010930 vs. NCBI nr
Match: gi|659101380|ref|XP_008451575.1| (PREDICTED: universal stress protein A-like protein isoform X1 [Cucumis melo]) HSP 1 Score: 196.4 bits (498), Expect = 3.3e-47 Identity = 106/173 (61.27%), Postives = 121/173 (69.94%), Query Frame = 1
BLAST of CmaCh17G010930 vs. NCBI nr
Match: gi|659101386|ref|XP_008451578.1| (PREDICTED: universal stress protein A-like protein isoform X4 [Cucumis melo]) HSP 1 Score: 194.5 bits (493), Expect = 1.3e-46 Identity = 103/161 (63.98%), Postives = 118/161 (73.29%), Query Frame = 1
BLAST of CmaCh17G010930 vs. NCBI nr
Match: gi|659101382|ref|XP_008451576.1| (PREDICTED: universal stress protein A-like protein isoform X2 [Cucumis melo]) HSP 1 Score: 189.5 bits (480), Expect = 4.0e-45 Identity = 102/170 (60.00%), Postives = 118/170 (69.41%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |