CmaCh17G009570 (gene) Cucurbita maxima (Rimu)

NameCmaCh17G009570
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu))
DescriptionUnknown protein
LocationCma_Chr17 : 7116646 .. 7120044 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGGCTTCTTTTCCAACACTGTTTAACCAGTTTCAGTGCAGAAAACTTGAAGATTCAGTGTATGACTGTTGATTCATGTGAGGCTCTGTTGCTGGTTGGAAGTTGATGGATTAGCCCCCTTTCTGCTTGGAAGAAAACCGCTTTTGGTAGTGTTTCTCAGGCAATTCATTCTTGGCTTTAGTTGGTGTACTCTGAGGTGAGATGGAAGAGGATGAAGAAATGAAGCACACAAAAAAATGTGGTACATCCGCTGCCACTTCTCTCCTCTTCAATTTACCTCTTCTATTATGTATGCAGTTCTCATCCTGAACGTCTCAGATAAACAAAAAAATTTAGTGTGAAGACTCTTGTAACTTAATTTAGGTGCATCTGGGTGTTGTATCTATTCAACTTTGAGTGCATGTTTGAGGCTATAAATTTTCATGTTTCTGGACGTACAAGACATTAAATATGGAACCTCTTTCATTCTTTCCTTATTCTGTCGCTCGCACACAATTAAGATTAGATAGTAAAGTCGCTACTACATGCATGACATGTCTAATATGTGCAAAAGATCATTAAAAACAGTTTGCCAGAACGTTGCCATAGACTCAAATGCTGGTTTAATTTTAATATTTAGTGCAAACCTTATTATCCTCTAAAATTTTTAGATGTTGTCCATTATGTTGCTAAAATTCAAGACTGTCAAATAAAACCATCTTTTTTCTTTTTCACCCACTGATATAATAAAAGAAGCAGAAAGCCAATATTTCATATTCTGCGAAGAGTAGTTCGTCCATTCATCTGTATATTTGAAAAAACTCGTAAGCAAAAGAGTTCATTAAATCTTGCATATGAAGCTCAAACGAAGCTAATACATAAGAACAGAAGGTGATGGGCATTAAAGAGATTCATTTTTCTCTGCAAGACAAAGCTTTATATCATCATATTATTCACTAGTGCAAGTTTTCACTTCAAGGTCTTGGAGGGAGGAGGAAGCACAGTATGTAAGAAGTTCGTCACAAGAAAACAAGCAGAGGTAAAACTATTTCAAGATAAAGGAATACTATATTAAATGCTAACAGTTGTTCGTTTGTCTTCTTCAGGTCCTCTTTCGTCCCGAAAATAACTGTACGGTCAGTCAAAGCCTTTCTTGTTCTTGAAGTTGCTCCTGTTCAGATTGAACGTAAAAGCACGAAACCAAAATAAGGGAATGCCTAAAACTAACAGAATACTTCTAGTTCTAAGGTAATCCAACCCAACCCAAGAACGGTGAACCCGAAGAGCCACCATCTTAAGGATACGGAATCCTAGTTAGAAATGACTCGTCGTTGGGCGACATTTTAGCTAGTGATCGTGAATCTGTGACTAAATAATCCAAAATGACACACATGGCTTTGAATGCAATGATTTTGACACTAACCTCTGATACAAAGAAGGCATGAAACCCATATGGAACTCTGTGTGGCAACTCAACAACTGCAACGGGCTCAGATGACATAGTTTTGGCATCCACGACATTCACCGCAGATTTTCTGTAGGTAACAATGAAAATTATTGTCCTCCTCTTTAACCAAATAAACTAAATTTGATTCATCACAGGTATTCGGTAAAACTGCCAACTTGCATTCTAATGCAAATTCAAAGGCTGCTGCTACAGGGTTAGTTCAATTTTATAGTGTAACAGCACAAGCCCAAGCCCACCACTAGCAGATATTGTCCGCTTCGTTCCGTTACGTATCTCCGTCAGTCTCACGGTTTTAAAACGCATCTCCTAGGAAAAGGTTTCCACACCCTTATAAGGAATGCTTCGTTCCCCTCTCCAACCGATGTGAGATCTCACATATAGAGAGTGGGTCTGTATATTCATGAAACGAAAAGGTTATAAGAAAAAGATTAATTGAGAAAATTATAAAACTCCCACTCTGTAACAGCCCAAGCCCACCGCTAGCAGATATTGTCCTCTTTGGGCATTCCTTTCAAGGACTTCCCCTCACGGTTTTAAAACGTGTCTACTAGGGAGAGGTTTCCGCACCCTATAAGAAATGTTTTGTTTTCTTCTCCAACCAATATGGGATCTCACTGTAGAACTAAACTTTCTAAACAGTAAGGTGTTCGATAACAACTATTCAGTAATAGGATATCTAAGAAAGCAAACCGCATTCCAGCTACTACTCGTATGATACATATAAAATACATATGACACAAAACTAGCGATATAATAGAAGAGGAAAACATTTACCCAGTATTCTCATCATGTACGAATAATATTAAGTAGCCATCATCTTCTTCTGAAGTGGTGCCAGGTATACGAGGAACAAAGATAGCTTCAGAACCAAATCTACCAGGTCCAAGGTCATACAGGCCTTGAACATTTCCTCCAACTTCAATCTTCGTTCTTCCAGTTTCACGTTTAGCATGCAGATCAAATTTAGCAATCCCCGTGACTTTTGCAATGCTGTCCAGTGTAGTTCCATATACATATCGTTGCTTCCTGATTGCATACAGAGTACATCATCAATTCCATGTGATAGGAATCCAGTTCATCAAGGCCAGAAAAACAAAAAGGAACATACGAATAAGAAAATGATAACGAGAATCATCCGAATCGCTAACTGCAGTAGATGGCATGCAATGCTGTCGCTAAAACACTGTAAATGCAATTTTGAATGGCATGGTATCCCATTTCAAACTGTTAATTACTCGGATATTCAAAGGAATAGAACAAAAATTCCCCTACGGCTAATGTTGTTTCTGAAGATATAATAGCCCAAACCCACCGCTAGTAAATATTGTCCTCTTTGGGATTTCCCTTTCGGGCTTCCCCTCAAGGTTTCTAAAACGCGTCTGCTAGGAAGAGGTTTCCGCACCCTTATAAAGAATGTTTCATTCTCTTCTCCAACCAATGTGGGATCTCATAGAAGATGTCTTCTAATGGGGTTCTAGTGCTATAATTGGAAAATTGCAAACGAAAGAGATGTCCTTTAGTTCAAGCTTTTCTTACTCCAAAATTGGATGATCTCTTCATATATCCCCATGGATTTGAGCCGATATTCTTTTACAAATGCTAGAAAAAAAAGGGAATTAAAATACCTGCCAGTGTAGCATTCATTCACTCTAGGAAAATCTACAGCAGATTCCGAGAGTTTCCTCTGTGAAGATAAACCAGATTTAAGATTGAATCTCATCTCATACCTGATAGATGGAAAAATAATTAGAAATATCACAGCCACATCAAGAACTTTTCTTCATTTGTAGAAATGGATTAGAGTCCTACAGCTCATTTGAGAAGTTCTCAAGCTTCTCCTTAACAGACCCACTGACCATGTCCAAGTCTGGATTCTCGAGACGGCACGTAATCAAAACTACTTCATCTCCTTCCTCCCAAGCATTAGCTAAGAAGAAGTATACAACATAA

mRNA sequence

ATGGGGCTTCTTTTCCAACACTGTTTAACCAGTTTCAGTGCAGAAAACTTGAAGATTCAGTGTATGACTGTTGATTCATGTGAGGCTCTGTTGCTGGTCTTGGAGGGAGGAGGAAGCACAGTATGTAAGAAGTTCGTCACAAGAAAACAAGCAGAGGTCCTCTTTCGTCCCGAAAATAACTGTACGATCAAATTTAGCAATCCCCGTGACTTTTGCAATGCTGTCCAGTGTAGTTCCATATACATATCGTTGCTTCCTGATTGCATACAGAGTACATCATCAATTCCATGTGATAGGAATCCAGTTCATCAAGGCCAGAAAAACAAAAAGGAACATACGAATAAGAAAATGATAACGAGAATCATCCGAATCGCTAACTGCAGTAGATGGCATGCAATGCTGTCGCTAAAACACTGTAAATGCAATTTTGAATGGCATGAGTCCTACAGCTCATTTGAGAAGTTCTCAAGCTTCTCCTTAACAGACCCACTGACCATGTCCAAGTCTGGATTCTCGAGACGGCACGTAATCAAAACTACTTCATCTCCTTCCTCCCAAGCATTAGCTAAGAAGAAGTATACAACATAA

Coding sequence (CDS)

ATGGGGCTTCTTTTCCAACACTGTTTAACCAGTTTCAGTGCAGAAAACTTGAAGATTCAGTGTATGACTGTTGATTCATGTGAGGCTCTGTTGCTGGTCTTGGAGGGAGGAGGAAGCACAGTATGTAAGAAGTTCGTCACAAGAAAACAAGCAGAGGTCCTCTTTCGTCCCGAAAATAACTGTACGATCAAATTTAGCAATCCCCGTGACTTTTGCAATGCTGTCCAGTGTAGTTCCATATACATATCGTTGCTTCCTGATTGCATACAGAGTACATCATCAATTCCATGTGATAGGAATCCAGTTCATCAAGGCCAGAAAAACAAAAAGGAACATACGAATAAGAAAATGATAACGAGAATCATCCGAATCGCTAACTGCAGTAGATGGCATGCAATGCTGTCGCTAAAACACTGTAAATGCAATTTTGAATGGCATGAGTCCTACAGCTCATTTGAGAAGTTCTCAAGCTTCTCCTTAACAGACCCACTGACCATGTCCAAGTCTGGATTCTCGAGACGGCACGTAATCAAAACTACTTCATCTCCTTCCTCCCAAGCATTAGCTAAGAAGAAGTATACAACATAA

Protein sequence

MGLLFQHCLTSFSAENLKIQCMTVDSCEALLLVLEGGGSTVCKKFVTRKQAEVLFRPENNCTIKFSNPRDFCNAVQCSSIYISLLPDCIQSTSSIPCDRNPVHQGQKNKKEHTNKKMITRIIRIANCSRWHAMLSLKHCKCNFEWHESYSSFEKFSSFSLTDPLTMSKSGFSRRHVIKTTSSPSSQALAKKKYTT
BLAST of CmaCh17G009570 vs. TrEMBL
Match: A0A0V0HJ00_SOLCH (Putative ovule protein (Fragment) OS=Solanum chacoense PE=4 SV=1)

HSP 1 Score: 60.5 bits (145), Expect = 2.7e-06
Identity = 33/40 (82.50%), Postives = 35/40 (87.50%), Query Frame = 1

Query: 150 SSFEKFSSFSLTDPLTMSKSGFSRRHVIKTTSSPSSQALA 190
           SS +KFSSFSLT PLTMS+SGF RR VI TTSSPSSQALA
Sbjct: 14  SSLQKFSSFSLTAPLTMSRSGFIRRQVINTTSSPSSQALA 53

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0V0HJ00_SOLCH2.7e-0682.50Putative ovule protein (Fragment) OS=Solanum chacoense PE=4 SV=1[more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh17G009570.1CmaCh17G009570.1mRNA


The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmaCh17G009570CmoCh17G009330Cucurbita moschata (Rifu)cmacmoB353
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CmaCh17G009570Silver-seed gourdcarcmaB0344
CmaCh17G009570Silver-seed gourdcarcmaB0497
CmaCh17G009570Silver-seed gourdcarcmaB0625
CmaCh17G009570Silver-seed gourdcarcmaB1058
CmaCh17G009570Silver-seed gourdcarcmaB1133
CmaCh17G009570Cucumber (Chinese Long) v3cmacucB0428
CmaCh17G009570Cucumber (Chinese Long) v3cmacucB0432
CmaCh17G009570Cucumber (Chinese Long) v3cmacucB0462
CmaCh17G009570Watermelon (97103) v2cmawmbB360
CmaCh17G009570Watermelon (97103) v2cmawmbB386
CmaCh17G009570Watermelon (97103) v2cmawmbB387
CmaCh17G009570Watermelon (97103) v2cmawmbB391
CmaCh17G009570Wax gourdcmawgoB0454
CmaCh17G009570Wax gourdcmawgoB0487
CmaCh17G009570Cucurbita maxima (Rimu)cmacmaB247
CmaCh17G009570Cucurbita maxima (Rimu)cmacmaB250
CmaCh17G009570Cucurbita maxima (Rimu)cmacmaB360
CmaCh17G009570Cucurbita maxima (Rimu)cmacmaB382
CmaCh17G009570Cucumber (Gy14) v1cgycmaB0346
CmaCh17G009570Cucurbita moschata (Rifu)cmacmoB351
CmaCh17G009570Cucurbita moschata (Rifu)cmacmoB354
CmaCh17G009570Cucurbita moschata (Rifu)cmacmoB374
CmaCh17G009570Wild cucumber (PI 183967)cmacpiB365
CmaCh17G009570Wild cucumber (PI 183967)cmacpiB392
CmaCh17G009570Cucumber (Chinese Long) v2cmacuB361
CmaCh17G009570Cucumber (Chinese Long) v2cmacuB388
CmaCh17G009570Melon (DHL92) v3.5.1cmameB326
CmaCh17G009570Melon (DHL92) v3.5.1cmameB333
CmaCh17G009570Watermelon (Charleston Gray)cmawcgB306
CmaCh17G009570Watermelon (Charleston Gray)cmawcgB310
CmaCh17G009570Watermelon (Charleston Gray)cmawcgB314
CmaCh17G009570Watermelon (97103) v1cmawmB328
CmaCh17G009570Watermelon (97103) v1cmawmB332
CmaCh17G009570Watermelon (97103) v1cmawmB336
CmaCh17G009570Cucurbita pepo (Zucchini)cmacpeB399
CmaCh17G009570Cucurbita pepo (Zucchini)cmacpeB371
CmaCh17G009570Cucurbita pepo (Zucchini)cmacpeB376
CmaCh17G009570Cucurbita pepo (Zucchini)cmacpeB404
CmaCh17G009570Bottle gourd (USVL1VR-Ls)cmalsiB348
CmaCh17G009570Bottle gourd (USVL1VR-Ls)cmalsiB351
CmaCh17G009570Bottle gourd (USVL1VR-Ls)cmalsiB352
CmaCh17G009570Cucumber (Gy14) v2cgybcmaB350
CmaCh17G009570Cucumber (Gy14) v2cgybcmaB925
CmaCh17G009570Melon (DHL92) v3.6.1cmamedB387
CmaCh17G009570Melon (DHL92) v3.6.1cmamedB379
CmaCh17G009570Melon (DHL92) v3.6.1cmamedB389