CmaCh17G008760 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh17G008760
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	ATP-dependent RNA helicase
Location	Cma_Chr17 : 6709227 .. 6713805 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCAGTTCGTGAACTAGCAAAAGGAATTACTTACATAGAGCCATTATTAACTGGATGGAAACCGCCATTGCCTATCAGGAGGATGTCGAGAAAGGCGTGTGATTTGATTCGTAAACAATGGCACATAATAGTCGATGGTGACGATATTCCACTGCCGATTAACAACTTCAAGGACATGAGACTCCCTGAACCAGTTTTGAAGAAGTTGGAAGAAAAGGGAATCGTGCAGCCGACTCCGATTCAGGTCCAAGGTCTACCTGTGATTTTATCTGGCAGAGATATGATTGGGATTGCATTTACTGGTTCAGGAAAGACCCTAGTTTTCGTTCTTCCTTTGATAATGATTGCTTTACAAGAAGAGGTCATGATGCCCATTGTTTCAGGGGAAGGACCTTTTGGCTTGATCATTTGTCCTTCAAGGAGCTTGCTAGACAGACCTATGAAGTGGTGGAACAGTTCTTAATACCCATGAAGGAGGCTGGATATCCAGAACTTAGGCCTTTGCTCTGTATAGGCGGAGTGGATATGCGGTCACAGATCGAGGTTGTGAAGAAGGGTGTTCATATCGTTGTTGCAACCCCCGGCAGGTTGAAGGATATGTTGGCGAAAAAGAAAATGAACCTTGACAATTGCAGGTATCTTACTTTAGATGAGGCTGATAGATTAGTGGATCTAGGATTCGAAGACGATATTCGGGAAGTTTTTGATCATTTCAAGGCTCAACGCCAAACACTATTGTTTTCTGCTACAATGCCTACCAAAATTCAAAATTTTGCAAGAAGTGCACTAGTAAAGCCTGTCACTGTTAACGTCGGAAGAGCTGGAGCTGCAAACCTCGACGTCATCCAGGAGGTCGAGTACGTGAAACAAGAGGCAAAAATTGTTTACTTGCTCGAGTGTCTGCAGAAAACTCCACCTCCAGTGTTGATATTTTGTGAGAATAAAGCCGATGTTGACGACATTCACGAGTATCTACTCTTGAAAGGTGTTGAAGCAGTGGCAATTCATGGAGGAAAAGATCAGGAAGAAAGAGAGTATGCTATCTCTTCATTTAAGGCGAGCAAGAAAGATGTATTGGTTGCTACTGATGTTGCATCAAAGGGTTTAGGTTTTCCAGACATTCAACATGTTATCAACTACGATATGCCAGCTGAAATTGAGAACTACGTTCATAGGATTGGACGAACTGGTCGGTGTGGTAAGACGGGAATTGCAACAACTTTCATAAACAAGAATCAAAGCGAAACGACCCTCCTTGATTTAAAGCACCTTCTGCAAGAAGCAAAACAGAGGATTCCACCAGTGTTGGCTGAGCTGAATGACCCTATGGAGGACGTGGAGGCGATCACCAATGCAAGTGGGGTCAAAGGTTGCGCTTATTGTGGCGGGCTTGGTCACCGTATCCGTGACTGCCCCAAGTTAGAGCATCAGAAAAGCATGGCGATTGCAAGTTCAAGAAGAGACTATTTTGGATCAGGCGGCTATAGAGGAGAAATTTGAGAAAGCTAAGAACAGAGGAAGGTATTTTTGTTTGATTTCCCCTTCCCTGCAGCTTGTAACTCTATAAAACTGATGAATTAGAGTGGTAATTGTTTGTCTGCTTTGACATTTGCTAGTCGTCATTGATTTGATATCAGGGACAATGCATGTGATCAAGAATCGGTGTCGATTAACCTTACTATGGATATCATTGATTGACAGTCTTTACAAATGATGACAAAGAGAAGGGCATGCTGAAAAAAGAGTAAAATCTTGTCTTCCATCAGAACTTTCTGCAACAGAGATGAACTGAAGCAGATATGTGCATTCAGGTCAGTTGAGAGTCGTTGAGTTTTGACTTCTTTTCTGAAAGTAAATAGCCTAACAGATCAACAGCTAGTCAACTGGAACTTCTACATCCATTCTTATGCCTGATTTATCAAGAACCTGCGAAAGAATGGCATAAAATGAAAACATTCAGCTCTATAAATCAAGAACAATATCACTGTCCAAGCCGCTAACAGATATTGTCTTATTTGAACTTTTCCTTTCGGACTTCCCTTCAAGGTTTTTAAAGCACATCTTTTGGAGTTATGCAGCGAAACTAGTACTCATCTCTTTGGGTTTTTCCTTCTGGGCTTTCCCATCTACTAGGGGTTAAGTTTCCATGCTTTTATAAGGAATGTTTCGTTTCACTCTAATCAATTTAGGACCTCACGATCAAGTTGCTCAGTTGTGTTGGTTTCTTATACTCTCTAGTGAAGTATGGTAAATCAATGAAACACGTCAGCACGTTAACAGTACCTTGATGCAGTCATCGAGTGTCAAGAGAGAGTTTCTTGTATAGCCTGCTTCTTGTAATAATTGGCACAATACTTGCTGCAATGGGAAAGAGAAACTAATAATAGTTCGTTTATGAAGGTGAAAGAAATAATGAGTACAAAGCAAATGTAGTTATTCCACTTCATGTGTTAGACTGGACTAAATATGTTCCTTTCGAGCGACGTAAATGCTCTCAATGCCTATGCACGAGCAAACATATCATCGAGGAGATGCACCAATTAATAGTATGCATGGATTGATGTCTCTCTCAGAGGATTTATATGTTATGTATTTGATACTAAATGAATCACATAATGATAAATTGGAGAAGTAACACAGATGCGAAACATCGAACAAAAGGAAAGAAGACGTCATGCCTCTCTCTCCTCGTCGGAGATGAATGAACTAGACAAATCCCCAAGCACTTCAATGATGTGGTTGAAAGACACCTTCCGGTTGCAGTCGACATCATATAGCTTGAAAATAACTGAAATAAGGAGACACTAGCAATTATTAATACGAAATGAACTATCTCAAAGTAGTTTTCTTAGGTGAGAGAACTCCTTGAGAGGACATTTCAAAGTCAATATCATGTATTAATGTCAGTTCATGACAACCAAGTTTTTTCCATTTAGTCCTCAAACTTATAATTCATGATATTTTTTGGTTTACCGTTCTAGATATAATGAATTATAACTTATAAGTTGGCTTCTTGTGACAAATTTGCTCCAATAATTGAGGAAGACACAACCAAAAAGTTCGATGACTTTTGAGTAAAAATGTAACAGCTCAAGCTCACGACTATCTAACATTCTCAGTTTTAGCTCGTTATGTATCGATGTCAGCCTCACAATTTTAAAACGCGTATGTTAGAGAGGGGTTTCAACACCCTTATAAAGAATGTTTCGTTCCCTCTCCAAGAACGTGGAATCTAACAATCCACCCCCTTGTGAGCCTAGCGTCCTCACTGACACACTATTAAGTGTCTACCTTTGGTACCATTTGTAACAGCACAAGTCTACTGCTAGTAGATATTATCCATTTTAGCTCGTTACATATACCCATCAGCCTCACGATTTTAAAACGCGTGTACTAGGGAGAGGTTTTCAACCACTAACAAGGAATGTTTTGTTCTCCTCTCCAACCAATATGGAATCTCACAAAAAAACATGTTTCGTTCTCCTCTCCAACCAACATGGAATCTCACAAAAAAAAAACGACTACTTACCACCATAAGTATTGATGGCCAATAGGATCCCTAATGTTTTAAATAAGCATTGATTTTCAACCAAAACCCTCAAGCCTGATCAAAACCAGCAAAAGATGAACAAGCAGTAGCAAAACATGCACTTACATTCAATCTTATGGTGCAAACTAGCTTTAGCACTGAATGCTGACAAGAAAGCCACAAAATCCTTGAAATTCAAACCATCAACCATCTTGAGCAGACGCTGAAGATAACGACAGAGTAAAACAAAGAAATCACTTGCCATAAGTCACAACTCATACAACCAACACACAAACACACAATGTTTATATTCAATTTCAAAACAATACCTGAGAAAGTGGATTCATAGCAAATTCAGGAACTGAGAGGAACTCATCAGCTGAAATAAACCCCTTGGAATTTCTATCAAGCTGGCAGAATTTCTGAAACAATGACACTATTTCCTGTTGGGAGACTAACTTCAACACAGCAAAAAGTAAGGCAACCAAACCACAAACAAATCAAAGAACGAAACCAATCGAGACAAGGATAGATTAACCTACAAAGCTTATTGCAGTGCTCTTGAACTTCTTCAATATCATATTGAGTGAGCATCGATGAGGCATTCCCCATGAGTTCTTGCCCAATTTCTAAATGATACTAAGGAATCAAACTTCTGAAATCGGAAAACCCTCATAAAAACCGCTCAACCAAATCAGTGATCAAATACAGAGAGAATCGGAATAGAACAAGTAAGAACCTCAAATTTAATGGATCGACTGAAATTCAAACAATGAAGCTTCAAACGGATAGAAAACTGCGACAAAAATGGTGAAAGGGGAAAGAAGAACAGACCTGAAAACCACAGCTGACCTGATAATGAACGGTTTCTTTTACTTACTCACAGCAGATATATAAATTGAACCATCCCTGCTGCAGCTATCACCTGGACATCATCGAGACGCTAAAAGGCAGATATGAGTTTTCATGGAGCTTTTTTGTTATCATCGAAGGCGACGAAGATTATTCCCTTTCGTCGACTCATGTTGAGAATCAAGGGAAGCCTTAA

mRNA sequence

ATGTCAGTTCGTGAACTAGCAAAAGGAATTACTTACATAGAGCCATTATTAACTGGATGGAAACCGCCATTGCCTATCAGGAGGATGTCGAGAAAGGCGTGTGATTTGATTCGTAAACAATGGCACATAATAGTCGATGGTGACGATATTCCACTGCCGATTAACAACTTCAAGGACATGAGACTCCCTGAACCAGTTTTGAAGAAGTTGGAAGAAAAGGGAATCGTGCAGCCGACTCCGATTCAGGTCCAAGGTCTACCTGTGATTTTATCTGGCAGAGATATGATTGGGATTGCATTTACTGGTTCAGGAAAGACCCTAGTTTTCGTTCTTCCTTTGATAATGATTGCTTTACAAGAAGAGGAGCTTGCTAGACAGACCTATGAAGTGGTGGAACAGTTCTTAATACCCATGAAGGAGGCTGGATATCCAGAACTTAGGCCTTTGCTCTGTATAGGCGGAGTGGATATGCGGTCACAGATCGAGGTTGTGAAGAAGGGTGTTCATATCGTTGTTGCAACCCCCGGCAGGTTGAAGGATATGTTGGCGAAAAAGAAAATGAACCTTGACAATTGCAGGTATCTTACTTTAGATGAGGCTGATAGATTAGTGGATCTAGGATTCGAAGACGATATTCGGGAAGTTTTTGATCATTTCAAGGCTCAACGCCAAACACTATTGTTTTCTGCTACAATGCCTACCAAAATTCAAAATTTTGCAAGAAGTGCACTAGTAAAGCCTGTCACTGTTAACGTCGGAAGAGCTGGAGCTGCAAACCTCGACGTCATCCAGGAGGTCGAGTACGTGAAACAAGAGGCAAAAATTGTTTACTTGCTCGAGTGTCTGCAGAAAACTCCACCTCCAGTGTTGATATTTTGTGAGAATAAAGCCGATGTTGACGACATTCACGAGTATCTACTCTTGAAAGGTGTTGAAGCAGTGGCAATTCATGGAGGAAAAGATCAGGAAGAAAGAGAGTATGCTATCTCTTCATTTAAGGCGAGCAAGAAAGATGTATTGGTTGCTACTGATGTTGCATCAAAGGGTTTAGGTTTTCCAGACATTCAACATGTTATCAACTACGATATGCCAGCTGAAATTGAGAACTACGTTCATAGGATTGGACGAACTGGTCGGTGTGGTAAGACGGGAATTGCAACAACTTTCATAAACAAGAATCAAAGCGAAACGACCCTCCTTGATTTAAAGCACCTTCTGCAAGAAGCAAAACAGAGGATTCCACCAGTGTTGGCTGAGCTGAATGACCCTATGGAGGACGTGGAGGCGATCACCAATGCAAGTGGGGTCAAAGGTTGCGCTTATTGTGGCGGGCTTGGTCACCGTATCCGTGACTGCCCCAAAAAAGCATGGCGATTGCAAGTTCAAGAAGAGACTATTTTGGATCAGGCGGCTATAGAGGAGAAATTTGAGAAAGCTAAGAACAGAGGAAGCTATCACCTGGACATCATCGAGACGCTAAAAGGCAGATATGAGTTTTCATGGAGCTTTTTTGTTATCATCGAAGGCGACGAAGATTATTCCCTTTCGTCGACTCATGTTGAGAATCAAGGGAAGCCTTAA

Coding sequence (CDS)

ATGTCAGTTCGTGAACTAGCAAAAGGAATTACTTACATAGAGCCATTATTAACTGGATGGAAACCGCCATTGCCTATCAGGAGGATGTCGAGAAAGGCGTGTGATTTGATTCGTAAACAATGGCACATAATAGTCGATGGTGACGATATTCCACTGCCGATTAACAACTTCAAGGACATGAGACTCCCTGAACCAGTTTTGAAGAAGTTGGAAGAAAAGGGAATCGTGCAGCCGACTCCGATTCAGGTCCAAGGTCTACCTGTGATTTTATCTGGCAGAGATATGATTGGGATTGCATTTACTGGTTCAGGAAAGACCCTAGTTTTCGTTCTTCCTTTGATAATGATTGCTTTACAAGAAGAGGAGCTTGCTAGACAGACCTATGAAGTGGTGGAACAGTTCTTAATACCCATGAAGGAGGCTGGATATCCAGAACTTAGGCCTTTGCTCTGTATAGGCGGAGTGGATATGCGGTCACAGATCGAGGTTGTGAAGAAGGGTGTTCATATCGTTGTTGCAACCCCCGGCAGGTTGAAGGATATGTTGGCGAAAAAGAAAATGAACCTTGACAATTGCAGGTATCTTACTTTAGATGAGGCTGATAGATTAGTGGATCTAGGATTCGAAGACGATATTCGGGAAGTTTTTGATCATTTCAAGGCTCAACGCCAAACACTATTGTTTTCTGCTACAATGCCTACCAAAATTCAAAATTTTGCAAGAAGTGCACTAGTAAAGCCTGTCACTGTTAACGTCGGAAGAGCTGGAGCTGCAAACCTCGACGTCATCCAGGAGGTCGAGTACGTGAAACAAGAGGCAAAAATTGTTTACTTGCTCGAGTGTCTGCAGAAAACTCCACCTCCAGTGTTGATATTTTGTGAGAATAAAGCCGATGTTGACGACATTCACGAGTATCTACTCTTGAAAGGTGTTGAAGCAGTGGCAATTCATGGAGGAAAAGATCAGGAAGAAAGAGAGTATGCTATCTCTTCATTTAAGGCGAGCAAGAAAGATGTATTGGTTGCTACTGATGTTGCATCAAAGGGTTTAGGTTTTCCAGACATTCAACATGTTATCAACTACGATATGCCAGCTGAAATTGAGAACTACGTTCATAGGATTGGACGAACTGGTCGGTGTGGTAAGACGGGAATTGCAACAACTTTCATAAACAAGAATCAAAGCGAAACGACCCTCCTTGATTTAAAGCACCTTCTGCAAGAAGCAAAACAGAGGATTCCACCAGTGTTGGCTGAGCTGAATGACCCTATGGAGGACGTGGAGGCGATCACCAATGCAAGTGGGGTCAAAGGTTGCGCTTATTGTGGCGGGCTTGGTCACCGTATCCGTGACTGCCCCAAAAAAGCATGGCGATTGCAAGTTCAAGAAGAGACTATTTTGGATCAGGCGGCTATAGAGGAGAAATTTGAGAAAGCTAAGAACAGAGGAAGCTATCACCTGGACATCATCGAGACGCTAAAAGGCAGATATGAGTTTTCATGGAGCTTTTTTGTTATCATCGAAGGCGACGAAGATTATTCCCTTTCGTCGACTCATGTTGAGAATCAAGGGAAGCCTTAA

Protein sequence

MSVRELAKGITYIEPLLTGWKPPLPIRRMSRKACDLIRKQWHIIVDGDDIPLPINNFKDMRLPEPVLKKLEEKGIVQPTPIQVQGLPVILSGRDMIGIAFTGSGKTLVFVLPLIMIALQEEELARQTYEVVEQFLIPMKEAGYPELRPLLCIGGVDMRSQIEVVKKGVHIVVATPGRLKDMLAKKKMNLDNCRYLTLDEADRLVDLGFEDDIREVFDHFKAQRQTLLFSATMPTKIQNFARSALVKPVTVNVGRAGAANLDVIQEVEYVKQEAKIVYLLECLQKTPPPVLIFCENKADVDDIHEYLLLKGVEAVAIHGGKDQEEREYAISSFKASKKDVLVATDVASKGLGFPDIQHVINYDMPAEIENYVHRIGRTGRCGKTGIATTFINKNQSETTLLDLKHLLQEAKQRIPPVLAELNDPMEDVEAITNASGVKGCAYCGGLGHRIRDCPKKAWRLQVQEETILDQAAIEEKFEKAKNRGSYHLDIIETLKGRYEFSWSFFVIIEGDEDYSLSSTHVENQGKP

Homology

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BLAST of CmaCh17G008760 vs. Swiss-Prot
Match: RH35_ARATH (DEAD-box ATP-dependent RNA helicase 35 OS=Arabidopsis thaliana GN=RH35 PE=2 SV=1)

HSP 1 Score: 822.4 bits (2123), Expect = 2.8e-237
Identity = 416/474 (87.76%), Postives = 431/474 (90.93%), Query Frame = 1


Query: 1   MSVRELAKGITYIEPLLTGWKPPLPIRRMSRKACDLIRKQWHIIVDGDDIPLPINNFKDM 60
           MSVRELAKGITY EPLLTGWKPPL IR+MS K  DLIRKQWHIIV+GDDIP PI NFKDM
Sbjct: 92  MSVRELAKGITYTEPLLTGWKPPLHIRKMSSKQRDLIRKQWHIIVNGDDIPPPIKNFKDM 151

Query: 61  RLPEPVLKKLEEKGIVQPTPIQVQGLPVILSGRDMIGIAFTGSGKTLVFVLPLIMIALQE 120
           + P PVL  L+EKGIVQPTPIQVQGLPVIL+GRDMIGIAFTGSGKTLVFVLP+IMIALQE
Sbjct: 152 KFPRPVLDTLKEKGIVQPTPIQVQGLPVILAGRDMIGIAFTGSGKTLVFVLPMIMIALQE 211

Query: 121 E--------------------ELARQTYEVVEQFLIPMKEAGYPELRPLLCIGGVDMRSQ 180
           E                    ELARQTYEVVEQF+ P+ EAGYP LR LLCIGG+DMRSQ
Sbjct: 212 EMMMPIAAGEGPIGLIVCPSRELARQTYEVVEQFVAPLVEAGYPPLRSLLCIGGIDMRSQ 271

Query: 181 IEVVKKGVHIVVATPGRLKDMLAKKKMNLDNCRYLTLDEADRLVDLGFEDDIREVFDHFK 240
           +EVVK+GVHIVVATPGRLKDMLAKKKM+LD CRYLTLDEADRLVDLGFEDDIREVFDHFK
Sbjct: 272 LEVVKRGVHIVVATPGRLKDMLAKKKMSLDACRYLTLDEADRLVDLGFEDDIREVFDHFK 331

Query: 241 AQRQTLLFSATMPTKIQNFARSALVKPVTVNVGRAGAANLDVIQEVEYVKQEAKIVYLLE 300
           +QRQTLLFSATMPTKIQ FARSALVKPVTVNVGRAGAANLDVIQEVEYVKQEAKIVYLLE
Sbjct: 332 SQRQTLLFSATMPTKIQIFARSALVKPVTVNVGRAGAANLDVIQEVEYVKQEAKIVYLLE 391

Query: 301 CLQKTPPPVLIFCENKADVDDIHEYLLLKGVEAVAIHGGKDQEEREYAISSFKASKKDVL 360
           CLQKT PPVLIFCENKADVDDIHEYLLLKGVEAVAIHGGKDQE+REYAISSFKA KKDVL
Sbjct: 392 CLQKTSPPVLIFCENKADVDDIHEYLLLKGVEAVAIHGGKDQEDREYAISSFKAGKKDVL 451

Query: 361 VATDVASKGLGFPDIQHVINYDMPAEIENYVHRIGRTGRCGKTGIATTFINKNQSETTLL 420
           VATDVASKGL FPDIQHVINYDMPAEIENYVHRIGRTGRCGKTGIATTFINKNQSETTLL
Sbjct: 452 VATDVASKGLDFPDIQHVINYDMPAEIENYVHRIGRTGRCGKTGIATTFINKNQSETTLL 511

Query: 421 DLKHLLQEAKQRIPPVLAELNDPMEDVEAITNASGVKGCAYCGGLGHRIRDCPK 455
           DLKHLLQEAKQRIPPVLAELNDPME+ E I NASGVKGCAYCGGLGHRIRDCPK
Sbjct: 512 DLKHLLQEAKQRIPPVLAELNDPMEEAETIANASGVKGCAYCGGLGHRIRDCPK 565

[Close]

BLAST of CmaCh17G008760 vs. Swiss-Prot
Match: RH35A_ORYSJ (DEAD-box ATP-dependent RNA helicase 35A OS=Oryza sativa subsp. japonica GN=Os02g0150100 PE=2 SV=2)

HSP 1 Score: 799.3 bits (2063), Expect = 2.6e-230
Identity = 392/474 (82.70%), Postives = 427/474 (90.08%), Query Frame = 1


Query: 1   MSVRELAKGITYIEPLLTGWKPPLPIRRMSRKACDLIRKQWHIIVDGDDIPLPINNFKDM 60
           MSVRELAKGITY +PL TGWKPPL +RRM R   D +R++WHI+VDGDD+P P  +F+D+
Sbjct: 128 MSVRELAKGITYSDPLKTGWKPPLRLRRMPRAKADELRRKWHILVDGDDVPPPARDFRDL 187

Query: 61  RLPEPVLKKLEEKGIVQPTPIQVQGLPVILSGRDMIGIAFTGSGKTLVFVLPLIMIALQE 120
           RLPEP+L+KL EKGIVQPTPIQVQGLPV+LSGRDMIGIAFTGSGKTLVFVLPLIM+ALQE
Sbjct: 188 RLPEPMLRKLREKGIVQPTPIQVQGLPVVLSGRDMIGIAFTGSGKTLVFVLPLIMVALQE 247

Query: 121 E--------------------ELARQTYEVVEQFLIPMKEAGYPELRPLLCIGGVDMRSQ 180
           E                    ELA+QTY+V+EQFL+P+KEAGYPE+RPLLCIGGVDMR+Q
Sbjct: 248 EMMMPIVPGEGPFGMIICPSRELAKQTYDVIEQFLVPLKEAGYPEIRPLLCIGGVDMRAQ 307

Query: 181 IEVVKKGVHIVVATPGRLKDMLAKKKMNLDNCRYLTLDEADRLVDLGFEDDIREVFDHFK 240
           ++VVKKGVHIVVATPGRLKD+LAKKKMNLDNCRYLTLDEADRLVDLGFEDDIREVFDHFK
Sbjct: 308 LDVVKKGVHIVVATPGRLKDLLAKKKMNLDNCRYLTLDEADRLVDLGFEDDIREVFDHFK 367

Query: 241 AQRQTLLFSATMPTKIQNFARSALVKPVTVNVGRAGAANLDVIQEVEYVKQEAKIVYLLE 300
           AQRQTLLFSATMP KIQNFA+SALVKPV VNVGRAGAANLDVIQEVEYVK++A+I+YLLE
Sbjct: 368 AQRQTLLFSATMPKKIQNFAKSALVKPVIVNVGRAGAANLDVIQEVEYVKEDARIIYLLE 427

Query: 301 CLQKTPPPVLIFCENKADVDDIHEYLLLKGVEAVAIHGGKDQEEREYAISSFKASKKDVL 360
           CLQKTPPPVL+FCENKADVD IHEYLLLKGVEAVAIHGGKDQEERE AI  FK  KKDVL
Sbjct: 428 CLQKTPPPVLVFCENKADVDYIHEYLLLKGVEAVAIHGGKDQEERENAIEFFKNGKKDVL 487

Query: 361 VATDVASKGLGFPDIQHVINYDMPAEIENYVHRIGRTGRCGKTGIATTFINKNQSETTLL 420
           VATDVASKGL FPDIQHVINYDMPAEIENYVHRIGRTGRCGKTGIATTFINKNQ+ETTLL
Sbjct: 488 VATDVASKGLDFPDIQHVINYDMPAEIENYVHRIGRTGRCGKTGIATTFINKNQTETTLL 547

Query: 421 DLKHLLQEAKQRIPPVLAELNDPMEDVEAITNASGVKGCAYCGGLGHRIRDCPK 455
           DLKHLL+EAKQRIPPVLAELNDP+ED E +   SGVKGCAYCGGLGHR+ DCPK
Sbjct: 548 DLKHLLKEAKQRIPPVLAELNDPLEDEETMAKESGVKGCAYCGGLGHRVTDCPK 601

[Close]

BLAST of CmaCh17G008760 vs. Swiss-Prot
Match: RH43_ARATH (Putative DEAD-box ATP-dependent RNA helicase 43 OS=Arabidopsis thaliana GN=RH43 PE=3 SV=1)

HSP 1 Score: 769.2 bits (1985), Expect = 2.8e-221
Identity = 387/474 (81.65%), Postives = 414/474 (87.34%), Query Frame = 1


Query: 1   MSVRELAKGITYIEPLLTGWKPPLPIRRMSRKACDLIRKQWHIIVDGDDIPLPINNFKDM 60
           MSV ELA+GITY EPL T WKPPL +R+MS K  DLIRKQWHI V+G+DIP PI NF DM
Sbjct: 43  MSVGELARGITYTEPLSTWWKPPLHVRKMSTKQMDLIRKQWHITVNGEDIPPPIKNFMDM 102

Query: 61  RLPEPVLKKLEEKGIVQPTPIQVQGLPVILSGRDMIGIAFTGSGKTLVFVLPLIMIALQE 120
           + P P+L+ L++KGI+ PTPIQVQGLPV+LSGRDMIGIAFTGSGKTLVFVLP+I++ALQE
Sbjct: 103 KFPSPLLRMLKDKGIMHPTPIQVQGLPVVLSGRDMIGIAFTGSGKTLVFVLPMIILALQE 162

Query: 121 E--------------------ELARQTYEVVEQFLIPMKEAGYPELRPLLCIGGVDMRSQ 180
           E                    ELA+QTY+VVEQF+  + E GYP LR LLCIGGVDMRSQ
Sbjct: 163 EIMMPIAAGEGPIALVICPSRELAKQTYDVVEQFVASLVEDGYPRLRSLLCIGGVDMRSQ 222

Query: 181 IEVVKKGVHIVVATPGRLKDMLAKKKMNLDNCRYLTLDEADRLVDLGFEDDIREVFDHFK 240
           ++VVKKGVHIVVATPGRLKD+LAKKKM+LD CR LTLDEADRLVDLGFEDDIR VFDHFK
Sbjct: 223 LDVVKKGVHIVVATPGRLKDILAKKKMSLDACRLLTLDEADRLVDLGFEDDIRHVFDHFK 282

Query: 241 AQRQTLLFSATMPTKIQNFARSALVKPVTVNVGRAGAANLDVIQEVEYVKQEAKIVYLLE 300
           +QRQTLLFSATMP KIQ FA SALVKPVTVNVGRAGAANLDVIQEVEYVKQEAKIVYLLE
Sbjct: 283 SQRQTLLFSATMPAKIQIFATSALVKPVTVNVGRAGAANLDVIQEVEYVKQEAKIVYLLE 342

Query: 301 CLQKTPPPVLIFCENKADVDDIHEYLLLKGVEAVAIHGGKDQEEREYAISSFKASKKDVL 360
           CLQKT PPVLIFCENKADVDDIHEYLLLKGVEAVAIHGGKDQE+R+YAIS FKA KKDVL
Sbjct: 343 CLQKTTPPVLIFCENKADVDDIHEYLLLKGVEAVAIHGGKDQEDRDYAISLFKAGKKDVL 402

Query: 361 VATDVASKGLGFPDIQHVINYDMPAEIENYVHRIGRTGRCGKTGIATTFINKNQSETTLL 420
           VATDVASKGL FPDIQHVINYDMP EIENYVHRIGRTGRCGKTGIATTFINKNQSE TLL
Sbjct: 403 VATDVASKGLDFPDIQHVINYDMPGEIENYVHRIGRTGRCGKTGIATTFINKNQSEITLL 462

Query: 421 DLKHLLQEAKQRIPPVLAELNDPMEDVEAITNASGVKGCAYCGGLGHRIRDCPK 455
           DLKHLLQEAKQRIPPVLAELN PME+ E I NASGVKGCAYCGGLGHRI  CPK
Sbjct: 463 DLKHLLQEAKQRIPPVLAELNGPMEETETIANASGVKGCAYCGGLGHRILQCPK 516

[Close]

BLAST of CmaCh17G008760 vs. Swiss-Prot
Match: RH35B_ORYSJ (DEAD-box ATP-dependent RNA helicase 35B OS=Oryza sativa subsp. japonica GN=Os06g0697200 PE=3 SV=1)

HSP 1 Score: 742.7 bits (1916), Expect = 2.9e-213
Identity = 373/491 (75.97%), Postives = 417/491 (84.93%), Query Frame = 1


Query: 1   MSVRELAKGITYIEPLLTGWKPPLPIRRMSRKACDLIRKQWHIIVDGDDIPLPINNFKDM 60
           M V E+AKGI+Y EP+ TGW+PPL +RRM R   D +R+ WHI+VDGDD+P P  +F D+
Sbjct: 119 MPVGEIAKGISYSEPITTGWRPPLRLRRMPRSRADALRRSWHILVDGDDVPPPSRSFGDL 178

Query: 61  RLPEPVLKKLEEKGIVQPTPIQVQGLPVILSGRDMIGIAFTGSGKTLVFVLPLIMIALQE 120
           RLPEP+L+ L  KGI +PTPIQVQGLPV LSGRDMIGIAFTGSGKTLVFVLPLIM ALQE
Sbjct: 179 RLPEPILRALRGKGIEKPTPIQVQGLPVALSGRDMIGIAFTGSGKTLVFVLPLIMAALQE 238

Query: 121 E--------------------ELARQTYEVVEQFLIPMKEAGYPELRPLLCIGGVDMRSQ 180
           E                    ELARQT+EV+E FL P+ EAGYPE+RPLLCIGGVDMR+Q
Sbjct: 239 EILMPIVPGEGPFGLIVCPSRELARQTHEVIEMFLAPLMEAGYPEIRPLLCIGGVDMRTQ 298

Query: 181 IEVVKKGVHIVVATPGRLKDMLAKKKMNLDNCRYLTLDEADRLVDLGFEDDIREVFDHFK 240
           +EVVKKGVHIVVATPGRLKD+L+KKKMNLDNCRYLTLDEADRLVDLGFEDDIREVFDHFK
Sbjct: 299 MEVVKKGVHIVVATPGRLKDLLSKKKMNLDNCRYLTLDEADRLVDLGFEDDIREVFDHFK 358

Query: 241 AQRQTLLFSATMPTKIQNFARSALVKPVTVNVGRAGAANLDVIQEVEYVKQEAKIVYLLE 300
           AQRQTLLFSATMP KIQNFA+SALVKP+ VNVGRAGAANLDVIQEVEYVK+EA+I+YLLE
Sbjct: 359 AQRQTLLFSATMPEKIQNFAKSALVKPIIVNVGRAGAANLDVIQEVEYVKEEARIIYLLE 418

Query: 301 CLQKTPPPVLIFCENKADVDDIHEYLLLKGVEAVAIHGGKDQEEREYAISSFKASKKDVL 360
           CLQKTPPPVL+FCE+KADVD I E+LLLKGVEAVAIHGGKD EER+ A  SFKAS+KDVL
Sbjct: 419 CLQKTPPPVLVFCEHKADVDYIQEFLLLKGVEAVAIHGGKDDEERKDAFKSFKASEKDVL 478

Query: 361 VATDVASKGLGFPDIQHVINYDMPAEIENYVHRIGRTGRCGKTGIATTFINKNQSETTLL 420
           VATDVASKGL  PDIQHVINYDMPAEIENYVHRIGRTGR GKTG+ATTFINKNQ+ETTLL
Sbjct: 479 VATDVASKGLDIPDIQHVINYDMPAEIENYVHRIGRTGRRGKTGVATTFINKNQTETTLL 538

Query: 421 DLKHLLQEAKQRIPPVLAELNDPMEDVE-AITNASGVKGCAYCGGLGHRIRDCPKKAWRL 471
           DLK LL E+KQR+PP+LA+L+DP ED + AI   SGVKGCA+CGGLGHRI  CPK+    
Sbjct: 539 DLKQLLIESKQRLPPILADLDDPQEDDKVAIAQQSGVKGCAFCGGLGHRIEACPKQ---- 598

[Close]

BLAST of CmaCh17G008760 vs. Swiss-Prot
Match: DDX41_MOUSE (Probable ATP-dependent RNA helicase DDX41 OS=Mus musculus GN=Ddx41 PE=1 SV=2)

HSP 1 Score: 617.1 bits (1590), Expect = 1.8e-175
Identity = 309/474 (65.19%), Postives = 373/474 (78.69%), Query Frame = 1


Query: 1   MSVRELAKGITYIEPLLTGWKPPLPIRRMSRKACDLIRKQWHIIVDGDDIPLPINNFKDM 60
           MSV+E+AKGITY +P+ T W PP  +  MS +  + +RK++HI+V+GD IP PI +FK+M
Sbjct: 127 MSVKEMAKGITYDDPIKTSWTPPRYVLSMSEERHERVRKKYHILVEGDGIPPPIKSFKEM 186

Query: 61  RLPEPVLKKLEEKGIVQPTPIQVQGLPVILSGRDMIGIAFTGSGKTLVFVLPLIMIALQE 120
           + P  +L+ L++KGI+ PTPIQ+QG+P ILSGRDMIGIAFTGSGKTLVF LP+IM  L++
Sbjct: 187 KFPAAILRGLKKKGILHPTPIQIQGIPTILSGRDMIGIAFTGSGKTLVFTLPVIMFCLEQ 246

Query: 121 E--------------------ELARQTYEVVEQFLIPMKEAGYPELRPLLCIGGVDMRSQ 180
           E                    ELARQT+ ++E +   ++E   P LR  LCIGG+ ++ Q
Sbjct: 247 EKRLPFSKREGPYGLIICPSRELARQTHGILEYYCRLLQEDSSPLLRCALCIGGMSVKEQ 306

Query: 181 IEVVKKGVHIVVATPGRLKDMLAKKKMNLDNCRYLTLDEADRLVDLGFEDDIREVFDHFK 240
           +E ++ GVH++VATPGRL D+L KK ++LD CRYL LDEADR++D+GFE DIR +F +FK
Sbjct: 307 METIRHGVHMMVATPGRLMDLLQKKMVSLDICRYLALDEADRMIDMGFEGDIRTIFSYFK 366

Query: 241 AQRQTLLFSATMPTKIQNFARSALVKPVTVNVGRAGAANLDVIQEVEYVKQEAKIVYLLE 300
            QRQTLLFSATMP KIQNFA+SALVKPVT+NVGRAGAA+LDVIQEVEYVK+EAK+VYLLE
Sbjct: 367 GQRQTLLFSATMPKKIQNFAKSALVKPVTINVGRAGAASLDVIQEVEYVKEEAKMVYLLE 426

Query: 301 CLQKTPPPVLIFCENKADVDDIHEYLLLKGVEAVAIHGGKDQEEREYAISSFKASKKDVL 360
           CLQKTPPPVLIF E KADVD IHEYLLLKGVEAVAIHGGKDQEER  AI +F+  KKDVL
Sbjct: 427 CLQKTPPPVLIFAEKKADVDAIHEYLLLKGVEAVAIHGGKDQEERTKAIEAFREGKKDVL 486

Query: 361 VATDVASKGLGFPDIQHVINYDMPAEIENYVHRIGRTGRCGKTGIATTFINKNQSETTLL 420
           VATDVASKGL FP IQHVINYDMP EIENYVHRIGRTGR G TGIATTFINK   E+ L+
Sbjct: 487 VATDVASKGLDFPAIQHVINYDMPEEIENYVHRIGRTGRSGNTGIATTFINKACDESVLM 546

Query: 421 DLKHLLQEAKQRIPPVLAELNDPMEDVEAITNASGVKGCAYCGGLGHRIRDCPK 455
           DLK LL EAKQ++PPVL  L+      E++ +  G +GCA+CGGLGHRI DCPK
Sbjct: 547 DLKALLLEAKQKVPPVLQVLHC---GDESMLDIGGERGCAFCGGLGHRITDCPK 597

[Close]

BLAST of CmaCh17G008760 vs. TrEMBL
Match: A0A0A0K6A2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G432260 PE=4 SV=1)

HSP 1 Score: 880.9 bits (2275), Expect = 7.5e-253
Identity = 446/474 (94.09%), Postives = 449/474 (94.73%), Query Frame = 1


Query: 1   MSVRELAKGITYIEPLLTGWKPPLPIRRMSRKACDLIRKQWHIIVDGDDIPLPINNFKDM 60
           MSVRELAKGITY EPLLTGWKPPLPIRRM +KACDLIRKQWHIIVDGD+IP PI NFKDM
Sbjct: 218 MSVRELAKGITYTEPLLTGWKPPLPIRRMPKKACDLIRKQWHIIVDGDEIPPPIKNFKDM 277

Query: 61  RLPEPVLKKLEEKGIVQPTPIQVQGLPVILSGRDMIGIAFTGSGKTLVFVLPLIMIALQE 120
           RLPEPVLKKL+EKGIVQPTPIQVQGLPVILSGRDMIGIAFTGSGKTLVFVLPLIMIALQE
Sbjct: 278 RLPEPVLKKLKEKGIVQPTPIQVQGLPVILSGRDMIGIAFTGSGKTLVFVLPLIMIALQE 337

Query: 121 E--------------------ELARQTYEVVEQFLIPMKEAGYPELRPLLCIGGVDMRSQ 180
           E                    ELARQTYEVVEQFLIPMKEAGYPELRPLLCIGGVDMRSQ
Sbjct: 338 EVMMPIVSGEGPFGLIICPSRELARQTYEVVEQFLIPMKEAGYPELRPLLCIGGVDMRSQ 397

Query: 181 IEVVKKGVHIVVATPGRLKDMLAKKKMNLDNCRYLTLDEADRLVDLGFEDDIREVFDHFK 240
           IEVVKKGVHIVVATPGRLKDMLAKKKMNLDNCRYLTLDEADRLVDLGFEDDIREVFDHFK
Sbjct: 398 IEVVKKGVHIVVATPGRLKDMLAKKKMNLDNCRYLTLDEADRLVDLGFEDDIREVFDHFK 457

Query: 241 AQRQTLLFSATMPTKIQNFARSALVKPVTVNVGRAGAANLDVIQEVEYVKQEAKIVYLLE 300
           AQRQTLLFSATMPTKIQNFARSALVKPVTVNVGRAGAANLDVIQEVEYVKQEAKIVYLLE
Sbjct: 458 AQRQTLLFSATMPTKIQNFARSALVKPVTVNVGRAGAANLDVIQEVEYVKQEAKIVYLLE 517

Query: 301 CLQKTPPPVLIFCENKADVDDIHEYLLLKGVEAVAIHGGKDQEEREYAISSFKASKKDVL 360
           CLQKTPPPVLIFCENKADVDDIHEYLLLKGVEAVAIHGGKDQEEREYAISSFKASKKDVL
Sbjct: 518 CLQKTPPPVLIFCENKADVDDIHEYLLLKGVEAVAIHGGKDQEEREYAISSFKASKKDVL 577

Query: 361 VATDVASKGLGFPDIQHVINYDMPAEIENYVHRIGRTGRCGKTGIATTFINKNQSETTLL 420
           VATDVASKGL FPDIQHVINYDMPAEIENYVHRIGRTGRCGKTGIATTFINKNQSETTLL
Sbjct: 578 VATDVASKGLDFPDIQHVINYDMPAEIENYVHRIGRTGRCGKTGIATTFINKNQSETTLL 637

Query: 421 DLKHLLQEAKQRIPPVLAELNDPMEDVEAITNASGVKGCAYCGGLGHRIRDCPK 455
           DLKHLLQEAKQRIPPVLAELNDPMEDVEAITNASGVKGCAYCGGLGHRIRDCPK
Sbjct: 638 DLKHLLQEAKQRIPPVLAELNDPMEDVEAITNASGVKGCAYCGGLGHRIRDCPK 691

[Close]

BLAST of CmaCh17G008760 vs. TrEMBL
Match: B9SS37_RICCO (Dead box ATP-dependent RNA helicase, putative OS=Ricinus communis GN=RCOM_0395640 PE=4 SV=1)

HSP 1 Score: 861.7 bits (2225), Expect = 4.7e-247
Identity = 433/474 (91.35%), Postives = 442/474 (93.25%), Query Frame = 1


Query: 1   MSVRELAKGITYIEPLLTGWKPPLPIRRMSRKACDLIRKQWHIIVDGDDIPLPINNFKDM 60
           MSVRELAKGITY EPLLTGWKPPL IRRMSRK CD IRKQWHIIVDG+DIP PI NFK M
Sbjct: 1   MSVRELAKGITYTEPLLTGWKPPLQIRRMSRKQCDAIRKQWHIIVDGEDIPPPIKNFKSM 60

Query: 61  RLPEPVLKKLEEKGIVQPTPIQVQGLPVILSGRDMIGIAFTGSGKTLVFVLPLIMIALQE 120
           R PEP+LKKL++KGIVQPTPIQVQGLPVIL+GRDMIGIAFTGSGKTLVFVLP+IM+ALQE
Sbjct: 61  RFPEPILKKLKDKGIVQPTPIQVQGLPVILTGRDMIGIAFTGSGKTLVFVLPMIMVALQE 120

Query: 121 E--------------------ELARQTYEVVEQFLIPMKEAGYPELRPLLCIGGVDMRSQ 180
           E                    ELARQTYEVVEQFLIPMKEAGYPELRPLLCIGGVDMRSQ
Sbjct: 121 EIMMPIAPGEGPFGLIICPSRELARQTYEVVEQFLIPMKEAGYPELRPLLCIGGVDMRSQ 180

Query: 181 IEVVKKGVHIVVATPGRLKDMLAKKKMNLDNCRYLTLDEADRLVDLGFEDDIREVFDHFK 240
           +EVVKKGVHIVVATPGRLKDMLAKKKMNLDNCRYLTLDEADRLVDLGFEDDIREVFDHFK
Sbjct: 181 LEVVKKGVHIVVATPGRLKDMLAKKKMNLDNCRYLTLDEADRLVDLGFEDDIREVFDHFK 240

Query: 241 AQRQTLLFSATMPTKIQNFARSALVKPVTVNVGRAGAANLDVIQEVEYVKQEAKIVYLLE 300
           AQRQTLLFSATMPTKIQNFARSALVKPVTVNVGRAGAANLDVIQEVEYVKQEAKIVYLLE
Sbjct: 241 AQRQTLLFSATMPTKIQNFARSALVKPVTVNVGRAGAANLDVIQEVEYVKQEAKIVYLLE 300

Query: 301 CLQKTPPPVLIFCENKADVDDIHEYLLLKGVEAVAIHGGKDQEEREYAISSFKASKKDVL 360
           CLQKTPPPVLIFCENKADVDDIHEYLLLKGVEAVAIHGGKDQEEREYAISSFKA KKDVL
Sbjct: 301 CLQKTPPPVLIFCENKADVDDIHEYLLLKGVEAVAIHGGKDQEEREYAISSFKAGKKDVL 360

Query: 361 VATDVASKGLGFPDIQHVINYDMPAEIENYVHRIGRTGRCGKTGIATTFINKNQSETTLL 420
           VATDVASKGL FPDIQHVINYDMPAEIENYVHRIGRTGRCGKTGIATTFINKNQSETTLL
Sbjct: 361 VATDVASKGLDFPDIQHVINYDMPAEIENYVHRIGRTGRCGKTGIATTFINKNQSETTLL 420

Query: 421 DLKHLLQEAKQRIPPVLAELNDPMEDVEAITNASGVKGCAYCGGLGHRIRDCPK 455
           DLKHLLQEAKQRIPPVLAELNDPMED + ITNASGVKGCAYCGGLGHRIRDCPK
Sbjct: 421 DLKHLLQEAKQRIPPVLAELNDPMEDGDTITNASGVKGCAYCGGLGHRIRDCPK 474

[Close]

BLAST of CmaCh17G008760 vs. TrEMBL
Match: A0A067E841_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g007831mg PE=4 SV=1)

HSP 1 Score: 860.1 bits (2221), Expect = 1.4e-246
Identity = 429/474 (90.51%), Postives = 444/474 (93.67%), Query Frame = 1


Query: 1   MSVRELAKGITYIEPLLTGWKPPLPIRRMSRKACDLIRKQWHIIVDGDDIPLPINNFKDM 60
           MSVRELAKGITY +PLLTGWKPPLPIRRMS+KACDLIRKQWHIIVDG+DIP PI NFKDM
Sbjct: 89  MSVRELAKGITYTDPLLTGWKPPLPIRRMSKKACDLIRKQWHIIVDGEDIPPPIKNFKDM 148

Query: 61  RLPEPVLKKLEEKGIVQPTPIQVQGLPVILSGRDMIGIAFTGSGKTLVFVLPLIMIALQE 120
           R PEP+LKKL+ KGIVQPTPIQVQGLPV+LSGRDMIGIAFTGSGKTLVFVLP+IMIA+ E
Sbjct: 149 RFPEPILKKLKAKGIVQPTPIQVQGLPVVLSGRDMIGIAFTGSGKTLVFVLPMIMIAMHE 208

Query: 121 E--------------------ELARQTYEVVEQFLIPMKEAGYPELRPLLCIGGVDMRSQ 180
           E                    ELARQTYEVVEQFL PM++AGYP+LR LLCIGGVDMRSQ
Sbjct: 209 EMMMPIVPGEGPFCLIVCPSRELARQTYEVVEQFLTPMRDAGYPDLRTLLCIGGVDMRSQ 268

Query: 181 IEVVKKGVHIVVATPGRLKDMLAKKKMNLDNCRYLTLDEADRLVDLGFEDDIREVFDHFK 240
           +EVVK+GVHIVVATPGRLKDMLAKKKMNLDNCRYLTLDEADRLVDLGFEDDIREVFDHFK
Sbjct: 269 LEVVKRGVHIVVATPGRLKDMLAKKKMNLDNCRYLTLDEADRLVDLGFEDDIREVFDHFK 328

Query: 241 AQRQTLLFSATMPTKIQNFARSALVKPVTVNVGRAGAANLDVIQEVEYVKQEAKIVYLLE 300
           AQRQTLLFSATMPTKIQNFARSALVKPVTVNVGRAGAANLDVIQEVEYVKQEAKIVYLLE
Sbjct: 329 AQRQTLLFSATMPTKIQNFARSALVKPVTVNVGRAGAANLDVIQEVEYVKQEAKIVYLLE 388

Query: 301 CLQKTPPPVLIFCENKADVDDIHEYLLLKGVEAVAIHGGKDQEEREYAISSFKASKKDVL 360
           CLQKTPPPVLIFCENKADVDDIHEYLLLKGVEAVA+HGGKDQEEREYAISSFKA KKDVL
Sbjct: 389 CLQKTPPPVLIFCENKADVDDIHEYLLLKGVEAVAVHGGKDQEEREYAISSFKAGKKDVL 448

Query: 361 VATDVASKGLGFPDIQHVINYDMPAEIENYVHRIGRTGRCGKTGIATTFINKNQSETTLL 420
           VATDVASKGL FPDIQHVINYDMPAEIENYVHRIGRTGRCGKTGIATTFINKNQSETTLL
Sbjct: 449 VATDVASKGLDFPDIQHVINYDMPAEIENYVHRIGRTGRCGKTGIATTFINKNQSETTLL 508

Query: 421 DLKHLLQEAKQRIPPVLAELNDPMEDVEAITNASGVKGCAYCGGLGHRIRDCPK 455
           DLKHLLQEAKQRIPPVLAELNDPMEDV+AITNASGVKGCAYCGGLGHRIRDCPK
Sbjct: 509 DLKHLLQEAKQRIPPVLAELNDPMEDVDAITNASGVKGCAYCGGLGHRIRDCPK 562

[Close]

BLAST of CmaCh17G008760 vs. TrEMBL
Match: V4UMQ8_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10025231mg PE=4 SV=1)

HSP 1 Score: 859.0 bits (2218), Expect = 3.0e-246
Identity = 428/474 (90.30%), Postives = 444/474 (93.67%), Query Frame = 1


Query: 1   MSVRELAKGITYIEPLLTGWKPPLPIRRMSRKACDLIRKQWHIIVDGDDIPLPINNFKDM 60
           MSVRELAKGITY +PLLTGWKPPLPIRRMS+KACDLIRKQWHIIVDG+DIP PI NFKDM
Sbjct: 89  MSVRELAKGITYTDPLLTGWKPPLPIRRMSKKACDLIRKQWHIIVDGEDIPPPIKNFKDM 148

Query: 61  RLPEPVLKKLEEKGIVQPTPIQVQGLPVILSGRDMIGIAFTGSGKTLVFVLPLIMIALQE 120
           R PEP+LKKL+ KGIVQPTPIQVQGLPV+LSGRDMIGIAFTGSGKTLVFVLP+IMIA+ E
Sbjct: 149 RFPEPILKKLKAKGIVQPTPIQVQGLPVVLSGRDMIGIAFTGSGKTLVFVLPMIMIAMHE 208

Query: 121 E--------------------ELARQTYEVVEQFLIPMKEAGYPELRPLLCIGGVDMRSQ 180
           E                    ELARQTYEVVEQFL PM++AGYP+LR LLCIGGVDMRSQ
Sbjct: 209 EMMMPIVPGEGPFCLIVCPSRELARQTYEVVEQFLTPMRDAGYPDLRTLLCIGGVDMRSQ 268

Query: 181 IEVVKKGVHIVVATPGRLKDMLAKKKMNLDNCRYLTLDEADRLVDLGFEDDIREVFDHFK 240
           +EVVK+GVHIVVATPGRLKDMLAKKKMNLDNCRYLTLDEADRLVDLGFEDDIREVFDHFK
Sbjct: 269 LEVVKRGVHIVVATPGRLKDMLAKKKMNLDNCRYLTLDEADRLVDLGFEDDIREVFDHFK 328

Query: 241 AQRQTLLFSATMPTKIQNFARSALVKPVTVNVGRAGAANLDVIQEVEYVKQEAKIVYLLE 300
           AQRQTLLFSATMPTKIQNFARSALVKPVTVNVGRAGAANLDVIQEVEYVKQEAKIVYLLE
Sbjct: 329 AQRQTLLFSATMPTKIQNFARSALVKPVTVNVGRAGAANLDVIQEVEYVKQEAKIVYLLE 388

Query: 301 CLQKTPPPVLIFCENKADVDDIHEYLLLKGVEAVAIHGGKDQEEREYAISSFKASKKDVL 360
           CLQKTPPPVLIFCENKADVDDIHEYLLLKGVEAVA+HGGKDQEEREYAISSFKA KKD+L
Sbjct: 389 CLQKTPPPVLIFCENKADVDDIHEYLLLKGVEAVAVHGGKDQEEREYAISSFKAGKKDLL 448

Query: 361 VATDVASKGLGFPDIQHVINYDMPAEIENYVHRIGRTGRCGKTGIATTFINKNQSETTLL 420
           VATDVASKGL FPDIQHVINYDMPAEIENYVHRIGRTGRCGKTGIATTFINKNQSETTLL
Sbjct: 449 VATDVASKGLDFPDIQHVINYDMPAEIENYVHRIGRTGRCGKTGIATTFINKNQSETTLL 508

Query: 421 DLKHLLQEAKQRIPPVLAELNDPMEDVEAITNASGVKGCAYCGGLGHRIRDCPK 455
           DLKHLLQEAKQRIPPVLAELNDPMEDV+AITNASGVKGCAYCGGLGHRIRDCPK
Sbjct: 509 DLKHLLQEAKQRIPPVLAELNDPMEDVDAITNASGVKGCAYCGGLGHRIRDCPK 562

[Close]

BLAST of CmaCh17G008760 vs. TrEMBL
Match: A5B7F0_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_09s0002g08120 PE=4 SV=1)

HSP 1 Score: 857.1 bits (2213), Expect = 1.2e-245
Identity = 429/474 (90.51%), Postives = 442/474 (93.25%), Query Frame = 1


Query: 1   MSVRELAKGITYIEPLLTGWKPPLPIRRMSRKACDLIRKQWHIIVDGDDIPLPINNFKDM 60
           MSVRELAKGITY EPLLTGWKPPLPIRRMSRK C+ IRKQWHIIVDGD+IP PI NFKDM
Sbjct: 88  MSVRELAKGITYTEPLLTGWKPPLPIRRMSRKECESIRKQWHIIVDGDEIPPPIKNFKDM 147

Query: 61  RLPEPVLKKLEEKGIVQPTPIQVQGLPVILSGRDMIGIAFTGSGKTLVFVLPLIMIALQE 120
           R PEP+LK L+ KGIVQPTPIQVQGLPVILSGRDMIGIAFTGSGKTLVFVLPLIM+ALQE
Sbjct: 148 RFPEPILKNLKAKGIVQPTPIQVQGLPVILSGRDMIGIAFTGSGKTLVFVLPLIMVALQE 207

Query: 121 E--------------------ELARQTYEVVEQFLIPMKEAGYPELRPLLCIGGVDMRSQ 180
           E                    ELARQTYEVVEQFL+PM+E GYPELRPLLCIGGVDMRSQ
Sbjct: 208 EVSMPIVPGEGPFGLVICPSRELARQTYEVVEQFLVPMRECGYPELRPLLCIGGVDMRSQ 267

Query: 181 IEVVKKGVHIVVATPGRLKDMLAKKKMNLDNCRYLTLDEADRLVDLGFEDDIREVFDHFK 240
           +EVVKKGVHI+VATPGRLKDMLAKKK+NLDNCRYLTLDEADRLVDLGFEDDIREVFDHFK
Sbjct: 268 LEVVKKGVHIIVATPGRLKDMLAKKKLNLDNCRYLTLDEADRLVDLGFEDDIREVFDHFK 327

Query: 241 AQRQTLLFSATMPTKIQNFARSALVKPVTVNVGRAGAANLDVIQEVEYVKQEAKIVYLLE 300
           AQRQTLLFSATMPTKIQNFARSALVKPVTVNVGRAGAANLDVIQEVEYVKQEAKIVYLLE
Sbjct: 328 AQRQTLLFSATMPTKIQNFARSALVKPVTVNVGRAGAANLDVIQEVEYVKQEAKIVYLLE 387

Query: 301 CLQKTPPPVLIFCENKADVDDIHEYLLLKGVEAVAIHGGKDQEEREYAISSFKASKKDVL 360
           CLQKT PPVLIFCENKADVDDIHEYLLLKGVEAVAIHGGKDQEEREYAISSFKA KKDVL
Sbjct: 388 CLQKTSPPVLIFCENKADVDDIHEYLLLKGVEAVAIHGGKDQEEREYAISSFKAGKKDVL 447

Query: 361 VATDVASKGLGFPDIQHVINYDMPAEIENYVHRIGRTGRCGKTGIATTFINKNQSETTLL 420
           VATDVASKGL FPDI+HVINYDMPAEIENYVHRIGRTGRCGKTGIATTFINKNQSETTLL
Sbjct: 448 VATDVASKGLDFPDIKHVINYDMPAEIENYVHRIGRTGRCGKTGIATTFINKNQSETTLL 507

Query: 421 DLKHLLQEAKQRIPPVLAELNDPMEDVEAITNASGVKGCAYCGGLGHRIRDCPK 455
           DLKHLLQEAKQRIPPVLAELNDPMEDV+AIT+ASGVKGCAYCGGLGHRIRDCPK
Sbjct: 508 DLKHLLQEAKQRIPPVLAELNDPMEDVDAITDASGVKGCAYCGGLGHRIRDCPK 561

[Close]

BLAST of CmaCh17G008760 vs. TAIR10
Match: AT5G51280.1 (AT5G51280.1 DEAD-box protein abstrakt, putative)

HSP 1 Score: 822.4 bits (2123), Expect = 1.6e-238
Identity = 416/474 (87.76%), Postives = 431/474 (90.93%), Query Frame = 1


Query: 1   MSVRELAKGITYIEPLLTGWKPPLPIRRMSRKACDLIRKQWHIIVDGDDIPLPINNFKDM 60
           MSVRELAKGITY EPLLTGWKPPL IR+MS K  DLIRKQWHIIV+GDDIP PI NFKDM
Sbjct: 92  MSVRELAKGITYTEPLLTGWKPPLHIRKMSSKQRDLIRKQWHIIVNGDDIPPPIKNFKDM 151

Query: 61  RLPEPVLKKLEEKGIVQPTPIQVQGLPVILSGRDMIGIAFTGSGKTLVFVLPLIMIALQE 120
           + P PVL  L+EKGIVQPTPIQVQGLPVIL+GRDMIGIAFTGSGKTLVFVLP+IMIALQE
Sbjct: 152 KFPRPVLDTLKEKGIVQPTPIQVQGLPVILAGRDMIGIAFTGSGKTLVFVLPMIMIALQE 211

Query: 121 E--------------------ELARQTYEVVEQFLIPMKEAGYPELRPLLCIGGVDMRSQ 180
           E                    ELARQTYEVVEQF+ P+ EAGYP LR LLCIGG+DMRSQ
Sbjct: 212 EMMMPIAAGEGPIGLIVCPSRELARQTYEVVEQFVAPLVEAGYPPLRSLLCIGGIDMRSQ 271

Query: 181 IEVVKKGVHIVVATPGRLKDMLAKKKMNLDNCRYLTLDEADRLVDLGFEDDIREVFDHFK 240
           +EVVK+GVHIVVATPGRLKDMLAKKKM+LD CRYLTLDEADRLVDLGFEDDIREVFDHFK
Sbjct: 272 LEVVKRGVHIVVATPGRLKDMLAKKKMSLDACRYLTLDEADRLVDLGFEDDIREVFDHFK 331

Query: 241 AQRQTLLFSATMPTKIQNFARSALVKPVTVNVGRAGAANLDVIQEVEYVKQEAKIVYLLE 300
           +QRQTLLFSATMPTKIQ FARSALVKPVTVNVGRAGAANLDVIQEVEYVKQEAKIVYLLE
Sbjct: 332 SQRQTLLFSATMPTKIQIFARSALVKPVTVNVGRAGAANLDVIQEVEYVKQEAKIVYLLE 391

Query: 301 CLQKTPPPVLIFCENKADVDDIHEYLLLKGVEAVAIHGGKDQEEREYAISSFKASKKDVL 360
           CLQKT PPVLIFCENKADVDDIHEYLLLKGVEAVAIHGGKDQE+REYAISSFKA KKDVL
Sbjct: 392 CLQKTSPPVLIFCENKADVDDIHEYLLLKGVEAVAIHGGKDQEDREYAISSFKAGKKDVL 451

Query: 361 VATDVASKGLGFPDIQHVINYDMPAEIENYVHRIGRTGRCGKTGIATTFINKNQSETTLL 420
           VATDVASKGL FPDIQHVINYDMPAEIENYVHRIGRTGRCGKTGIATTFINKNQSETTLL
Sbjct: 452 VATDVASKGLDFPDIQHVINYDMPAEIENYVHRIGRTGRCGKTGIATTFINKNQSETTLL 511

Query: 421 DLKHLLQEAKQRIPPVLAELNDPMEDVEAITNASGVKGCAYCGGLGHRIRDCPK 455
           DLKHLLQEAKQRIPPVLAELNDPME+ E I NASGVKGCAYCGGLGHRIRDCPK
Sbjct: 512 DLKHLLQEAKQRIPPVLAELNDPMEEAETIANASGVKGCAYCGGLGHRIRDCPK 565

[Close]

BLAST of CmaCh17G008760 vs. TAIR10
Match: AT4G33370.1 (AT4G33370.1 DEA(D/H)-box RNA helicase family protein)

HSP 1 Score: 769.2 bits (1985), Expect = 1.6e-222
Identity = 387/474 (81.65%), Postives = 414/474 (87.34%), Query Frame = 1


Query: 1   MSVRELAKGITYIEPLLTGWKPPLPIRRMSRKACDLIRKQWHIIVDGDDIPLPINNFKDM 60
           MSV ELA+GITY EPL T WKPPL +R+MS K  DLIRKQWHI V+G+DIP PI NF DM
Sbjct: 43  MSVGELARGITYTEPLSTWWKPPLHVRKMSTKQMDLIRKQWHITVNGEDIPPPIKNFMDM 102

Query: 61  RLPEPVLKKLEEKGIVQPTPIQVQGLPVILSGRDMIGIAFTGSGKTLVFVLPLIMIALQE 120
           + P P+L+ L++KGI+ PTPIQVQGLPV+LSGRDMIGIAFTGSGKTLVFVLP+I++ALQE
Sbjct: 103 KFPSPLLRMLKDKGIMHPTPIQVQGLPVVLSGRDMIGIAFTGSGKTLVFVLPMIILALQE 162

Query: 121 E--------------------ELARQTYEVVEQFLIPMKEAGYPELRPLLCIGGVDMRSQ 180
           E                    ELA+QTY+VVEQF+  + E GYP LR LLCIGGVDMRSQ
Sbjct: 163 EIMMPIAAGEGPIALVICPSRELAKQTYDVVEQFVASLVEDGYPRLRSLLCIGGVDMRSQ 222

Query: 181 IEVVKKGVHIVVATPGRLKDMLAKKKMNLDNCRYLTLDEADRLVDLGFEDDIREVFDHFK 240
           ++VVKKGVHIVVATPGRLKD+LAKKKM+LD CR LTLDEADRLVDLGFEDDIR VFDHFK
Sbjct: 223 LDVVKKGVHIVVATPGRLKDILAKKKMSLDACRLLTLDEADRLVDLGFEDDIRHVFDHFK 282

Query: 241 AQRQTLLFSATMPTKIQNFARSALVKPVTVNVGRAGAANLDVIQEVEYVKQEAKIVYLLE 300
           +QRQTLLFSATMP KIQ FA SALVKPVTVNVGRAGAANLDVIQEVEYVKQEAKIVYLLE
Sbjct: 283 SQRQTLLFSATMPAKIQIFATSALVKPVTVNVGRAGAANLDVIQEVEYVKQEAKIVYLLE 342

Query: 301 CLQKTPPPVLIFCENKADVDDIHEYLLLKGVEAVAIHGGKDQEEREYAISSFKASKKDVL 360
           CLQKT PPVLIFCENKADVDDIHEYLLLKGVEAVAIHGGKDQE+R+YAIS FKA KKDVL
Sbjct: 343 CLQKTTPPVLIFCENKADVDDIHEYLLLKGVEAVAIHGGKDQEDRDYAISLFKAGKKDVL 402

Query: 361 VATDVASKGLGFPDIQHVINYDMPAEIENYVHRIGRTGRCGKTGIATTFINKNQSETTLL 420
           VATDVASKGL FPDIQHVINYDMP EIENYVHRIGRTGRCGKTGIATTFINKNQSE TLL
Sbjct: 403 VATDVASKGLDFPDIQHVINYDMPGEIENYVHRIGRTGRCGKTGIATTFINKNQSEITLL 462

Query: 421 DLKHLLQEAKQRIPPVLAELNDPMEDVEAITNASGVKGCAYCGGLGHRIRDCPK 455
           DLKHLLQEAKQRIPPVLAELN PME+ E I NASGVKGCAYCGGLGHRI  CPK
Sbjct: 463 DLKHLLQEAKQRIPPVLAELNGPMEETETIANASGVKGCAYCGGLGHRILQCPK 516

[Close]

BLAST of CmaCh17G008760 vs. TAIR10
Match: AT1G55150.1 (AT1G55150.1 DEA(D/H)-box RNA helicase family protein)

HSP 1 Score: 279.6 bits (714), Expect = 3.9e-75
Identity = 157/397 (39.55%), Postives = 232/397 (58.44%), Query Frame = 1


Query: 38  RKQWHIIVDGDDIPLPINNFKDMRLPEPVLKKLEEKGIVQPTPIQVQGLPVILSGRDMIG 97
           RK   I V+G DIP P+ +F+D+  P+ VL+++++ G  +PTPIQ QG P+ + GRD+IG
Sbjct: 82  RKLREITVEGKDIPKPVKSFRDVGFPDYVLEEVKKAGFTEPTPIQSQGWPMAMKGRDLIG 141

Query: 98  IAFTGSGKTLVFVLPLIMIALQEEELAR----------QTYEVVEQFLIPMKEAGYPELR 157
           IA TGSGKTL ++LP I+    +  LA            T E+  Q      + G     
Sbjct: 142 IAETGSGKTLSYLLPAIVHVNAQPMLAHGDGPIVLVLAPTRELAVQIQQEASKFGSSSKI 201

Query: 158 PLLCI-GGVDMRSQIEVVKKGVHIVVATPGRLKDMLAKKKMNLDNCRYLTLDEADRLVDL 217
              CI GGV    Q+  ++KGV IV+ATPGRL DM+     NL    YL LDEADR++D+
Sbjct: 202 KTTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMMESNNTNLRRVTYLVLDEADRMLDM 261

Query: 218 GFEDDIREVFDHFKAQRQTLLFSATMPTKIQNFARSALVKPVTVNVGRAG-AANLDVIQE 277
           GF+  IR++  H +  RQTL +SAT P +++  ++  L  P  V +G +   AN  + Q 
Sbjct: 262 GFDPQIRKIVSHIRPDRQTLYWSATWPKEVEQLSKKFLYNPYKVIIGSSDLKANRAIRQI 321

Query: 278 VEYVKQEAKIVYLLECLQ--KTPPPVLIFCENKADVDDIHEYLLLKGVEAVAIHGGKDQE 337
           V+ + +  K   L++ L+       +L+F + K   D I   L + G  A++IHG K Q 
Sbjct: 322 VDVISESQKYNKLVKLLEDIMDGSRILVFLDTKKGCDQITRQLRMDGWPALSIHGDKSQA 381

Query: 338 EREYAISSFKASKKDVLVATDVASKGLGFPDIQHVINYDMPAEIENYVHRIGRTGRCGKT 397
           ER++ +S F++ K  ++ ATDVA++GL   D+++VINYD P  +E+YVHRIGRTGR G  
Sbjct: 382 ERDWVLSEFRSGKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVHRIGRTGRAGAK 441

Query: 398 GIATTFINKNQSETTLLDLKHLLQEAKQRIPPVLAEL 421
           G A TF     +     +L ++LQEA Q++ P LA +
Sbjct: 442 GTAYTFFTVANARFA-KELTNILQEAGQKVSPELASM 477

[Close]

BLAST of CmaCh17G008760 vs. TAIR10
Match: AT2G47330.1 (AT2G47330.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein)

HSP 1 Score: 276.6 bits (706), Expect = 3.3e-74
Identity = 165/416 (39.66%), Postives = 233/416 (56.01%), Query Frame = 1


Query: 38  RKQWHIIVDGDDIPLPINNFKDMRLPEPVLKKLEEKGIVQPTPIQVQGLPVILSGRDMIG 97
           R++  I V G D+  P+  F+D      ++  ++++   +PT IQ Q LP++LSGRD+IG
Sbjct: 211 RQRLGIRVSGFDVHRPVKTFEDCGFSSQIMSAIKKQAYEKPTAIQCQALPIVLSGRDVIG 270

Query: 98  IAFTGSGKTLVFVLPLIMIALQEEELARQ----------TYEVVEQFLIPMKEAGYPE-L 157
           IA TGSGKT  FVLP+I+  + + EL R           T E+  Q  +  K+      L
Sbjct: 271 IAKTGSGKTAAFVLPMIVHIMDQPELQRDEGPIGVICAPTRELAHQIFLEAKKFSKAYGL 330

Query: 158 RPLLCIGGVDMRSQIEVVKKGVHIVVATPGRLKDMLAKKKMNLDNCRYLTLDEADRLVDL 217
           R     GG+    Q + +K G  IVVATPGRL DML  K + +    YL LDEADR+ DL
Sbjct: 331 RVSAVYGGMSKHEQFKELKAGCEIVVATPGRLIDMLKMKALTMMRASYLVLDEADRMFDL 390

Query: 218 GFEDDIREVFDHFKAQRQTLLFSATMPTKIQNFARSALVKPVTVNVGRAGAANLDVIQEV 277
           GFE  +R +    +  RQTLLFSATMP K++  AR  L  P+ V VG  G AN D+ Q V
Sbjct: 391 GFEPQVRSIVGQIRPDRQTLLFSATMPWKVEKLAREILSDPIRVTVGEVGMANEDITQVV 450

Query: 278 EYVKQEA-KIVYLLECL--QKTPPPVLIFCENKADVDDIHEYLLLKGVEAVAIHGGKDQE 337
             +  +A K+ +LLE L        VL+F   KA VD+I   L L   +  A+HG KDQ 
Sbjct: 451 NVIPSDAEKLPWLLEKLPGMIDEGDVLVFASKKATVDEIEAQLTLNSFKVAALHGDKDQA 510

Query: 338 EREYAISSFKASKKDVLVATDVASKGLGFPDIQHVINYDMPAEIENYVHRIGRTGRCG-K 397
            R   +  FK+    VL+ATDVA++GL    ++ V+NYD+  +++ +VHRIGRTGR G +
Sbjct: 511 SRMETLQKFKSGVHHVLIATDVAARGLDIKSLKTVVNYDIAKDMDMHVHRIGRTGRAGDR 570

Query: 398 TGIATTFINKNQSETTLLDLKHLLQEAKQRIPPVLAELNDPMEDVEAITNASGVKG 439
            G+A T + + ++     +L + L  A Q +PP L +L   M+D    +   G KG
Sbjct: 571 DGVAYTLVTQREARFA-GELVNSLVAAGQNVPPELTDL--AMKDGRFKSKRDGRKG 623

[Close]

BLAST of CmaCh17G008760 vs. TAIR10
Match: AT5G63120.2 (AT5G63120.2 P-loop containing nucleoside triphosphate hydrolases superfamily protein)

HSP 1 Score: 275.4 bits (703), Expect = 7.3e-74
Identity = 158/410 (38.54%), Postives = 231/410 (56.34%), Query Frame = 1


Query: 26  IRRMSRKACDLIRKQWHIIVDGDDIPLPINNFKDMRLPEPVLKKLEEKGIVQPTPIQVQG 85
           ++ M+ +   + R +  I V+G D+P P+  F+D   P+ +L+ + + G  +PTPIQ QG
Sbjct: 136 VQAMTEQDVAMYRTERDISVEGRDVPKPMKMFQDANFPDNILEAIAKLGFTEPTPIQAQG 195

Query: 86  LPVILSGRDMIGIAFTGSGKTLVFVLPLIMIALQEEELARQTYEVVEQFLIPMKEAGY-- 145
            P+ L GRD+IGIA TGSGKTL ++LP ++    +  L +    +V   L P +E     
Sbjct: 196 WPMALKGRDLIGIAETGSGKTLAYLLPALVHVSAQPRLGQDDGPIV-LILAPTRELAVQI 255

Query: 146 ----------PELRPLLCIGGVDMRSQIEVVKKGVHIVVATPGRLKDMLAKKKMNLDNCR 205
                       +R     GG     QI  +++GV IV+ATPGRL DML  +  NL    
Sbjct: 256 QEESRKFGLRSGVRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLECQHTNLKRVT 315

Query: 206 YLTLDEADRLVDLGFEDDIREVFDHFKAQRQTLLFSATMPTKIQNFARSALVKPVTVNVG 265
           YL LDEADR++D+GFE  IR++    +  RQTLL+SAT P +++  AR  L  P    +G
Sbjct: 316 YLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTLLWSATWPREVETLARQFLRDPYKAIIG 375

Query: 266 RAG-AANLDVIQEVEYVKQEAKIVYLLECLQK--TPPPVLIFCENKADVDDIHEYLLLKG 325
                AN  + Q +E V    K   LL  L++      +LIF E K   D +   L + G
Sbjct: 376 STDLKANQSINQVIEIVPTPEKYNRLLTLLKQLMDGSKILIFVETKRGCDQVTRQLRMDG 435

Query: 326 VEAVAIHGGKDQEEREYAISSFKASKKDVLVATDVASKGLGFPDIQHVINYDMPAEIENY 385
             A+AIHG K Q ER+  ++ FK+ +  ++ ATDVA++GL   DI+ V+NYD P  +E+Y
Sbjct: 436 WPALAIHGDKTQSERDRVLAEFKSGRSPIMTATDVAARGLDVKDIKCVVNYDFPNTLEDY 495

Query: 386 VHRIGRTGRCGKTGIATTFINKNQSETTLLDLKHLLQEAKQRIPPVLAEL 421
           +HRIGRTGR G  G+A TF   + ++    +L  +LQEA Q +PP L+ L
Sbjct: 496 IHRIGRTGRAGAKGMAFTFFTHDNAKFA-RELVKILQEAGQVVPPTLSAL 543

[Close]

BLAST of CmaCh17G008760 vs. NCBI nr
Match: gi|449436164|ref|XP_004135864.1| (PREDICTED: DEAD-box ATP-dependent RNA helicase 35 [Cucumis sativus])

HSP 1 Score: 880.9 bits (2275), Expect = 1.1e-252
Identity = 446/474 (94.09%), Postives = 449/474 (94.73%), Query Frame = 1


Query: 1   MSVRELAKGITYIEPLLTGWKPPLPIRRMSRKACDLIRKQWHIIVDGDDIPLPINNFKDM 60
           MSVRELAKGITY EPLLTGWKPPLPIRRM +KACDLIRKQWHIIVDGD+IP PI NFKDM
Sbjct: 98  MSVRELAKGITYTEPLLTGWKPPLPIRRMPKKACDLIRKQWHIIVDGDEIPPPIKNFKDM 157

Query: 61  RLPEPVLKKLEEKGIVQPTPIQVQGLPVILSGRDMIGIAFTGSGKTLVFVLPLIMIALQE 120
           RLPEPVLKKL+EKGIVQPTPIQVQGLPVILSGRDMIGIAFTGSGKTLVFVLPLIMIALQE
Sbjct: 158 RLPEPVLKKLKEKGIVQPTPIQVQGLPVILSGRDMIGIAFTGSGKTLVFVLPLIMIALQE 217

Query: 121 E--------------------ELARQTYEVVEQFLIPMKEAGYPELRPLLCIGGVDMRSQ 180
           E                    ELARQTYEVVEQFLIPMKEAGYPELRPLLCIGGVDMRSQ
Sbjct: 218 EVMMPIVSGEGPFGLIICPSRELARQTYEVVEQFLIPMKEAGYPELRPLLCIGGVDMRSQ 277

Query: 181 IEVVKKGVHIVVATPGRLKDMLAKKKMNLDNCRYLTLDEADRLVDLGFEDDIREVFDHFK 240
           IEVVKKGVHIVVATPGRLKDMLAKKKMNLDNCRYLTLDEADRLVDLGFEDDIREVFDHFK
Sbjct: 278 IEVVKKGVHIVVATPGRLKDMLAKKKMNLDNCRYLTLDEADRLVDLGFEDDIREVFDHFK 337

Query: 241 AQRQTLLFSATMPTKIQNFARSALVKPVTVNVGRAGAANLDVIQEVEYVKQEAKIVYLLE 300
           AQRQTLLFSATMPTKIQNFARSALVKPVTVNVGRAGAANLDVIQEVEYVKQEAKIVYLLE
Sbjct: 338 AQRQTLLFSATMPTKIQNFARSALVKPVTVNVGRAGAANLDVIQEVEYVKQEAKIVYLLE 397

Query: 301 CLQKTPPPVLIFCENKADVDDIHEYLLLKGVEAVAIHGGKDQEEREYAISSFKASKKDVL 360
           CLQKTPPPVLIFCENKADVDDIHEYLLLKGVEAVAIHGGKDQEEREYAISSFKASKKDVL
Sbjct: 398 CLQKTPPPVLIFCENKADVDDIHEYLLLKGVEAVAIHGGKDQEEREYAISSFKASKKDVL 457

Query: 361 VATDVASKGLGFPDIQHVINYDMPAEIENYVHRIGRTGRCGKTGIATTFINKNQSETTLL 420
           VATDVASKGL FPDIQHVINYDMPAEIENYVHRIGRTGRCGKTGIATTFINKNQSETTLL
Sbjct: 458 VATDVASKGLDFPDIQHVINYDMPAEIENYVHRIGRTGRCGKTGIATTFINKNQSETTLL 517

Query: 421 DLKHLLQEAKQRIPPVLAELNDPMEDVEAITNASGVKGCAYCGGLGHRIRDCPK 455
           DLKHLLQEAKQRIPPVLAELNDPMEDVEAITNASGVKGCAYCGGLGHRIRDCPK
Sbjct: 518 DLKHLLQEAKQRIPPVLAELNDPMEDVEAITNASGVKGCAYCGGLGHRIRDCPK 571

[Close]

BLAST of CmaCh17G008760 vs. NCBI nr
Match: gi|700190012|gb|KGN45245.1| (hypothetical protein Csa_7G432260 [Cucumis sativus])

HSP 1 Score: 880.9 bits (2275), Expect = 1.1e-252
Identity = 446/474 (94.09%), Postives = 449/474 (94.73%), Query Frame = 1


Query: 1   MSVRELAKGITYIEPLLTGWKPPLPIRRMSRKACDLIRKQWHIIVDGDDIPLPINNFKDM 60
           MSVRELAKGITY EPLLTGWKPPLPIRRM +KACDLIRKQWHIIVDGD+IP PI NFKDM
Sbjct: 218 MSVRELAKGITYTEPLLTGWKPPLPIRRMPKKACDLIRKQWHIIVDGDEIPPPIKNFKDM 277

Query: 61  RLPEPVLKKLEEKGIVQPTPIQVQGLPVILSGRDMIGIAFTGSGKTLVFVLPLIMIALQE 120
           RLPEPVLKKL+EKGIVQPTPIQVQGLPVILSGRDMIGIAFTGSGKTLVFVLPLIMIALQE
Sbjct: 278 RLPEPVLKKLKEKGIVQPTPIQVQGLPVILSGRDMIGIAFTGSGKTLVFVLPLIMIALQE 337

Query: 121 E--------------------ELARQTYEVVEQFLIPMKEAGYPELRPLLCIGGVDMRSQ 180
           E                    ELARQTYEVVEQFLIPMKEAGYPELRPLLCIGGVDMRSQ
Sbjct: 338 EVMMPIVSGEGPFGLIICPSRELARQTYEVVEQFLIPMKEAGYPELRPLLCIGGVDMRSQ 397

Query: 181 IEVVKKGVHIVVATPGRLKDMLAKKKMNLDNCRYLTLDEADRLVDLGFEDDIREVFDHFK 240
           IEVVKKGVHIVVATPGRLKDMLAKKKMNLDNCRYLTLDEADRLVDLGFEDDIREVFDHFK
Sbjct: 398 IEVVKKGVHIVVATPGRLKDMLAKKKMNLDNCRYLTLDEADRLVDLGFEDDIREVFDHFK 457

Query: 241 AQRQTLLFSATMPTKIQNFARSALVKPVTVNVGRAGAANLDVIQEVEYVKQEAKIVYLLE 300
           AQRQTLLFSATMPTKIQNFARSALVKPVTVNVGRAGAANLDVIQEVEYVKQEAKIVYLLE
Sbjct: 458 AQRQTLLFSATMPTKIQNFARSALVKPVTVNVGRAGAANLDVIQEVEYVKQEAKIVYLLE 517

Query: 301 CLQKTPPPVLIFCENKADVDDIHEYLLLKGVEAVAIHGGKDQEEREYAISSFKASKKDVL 360
           CLQKTPPPVLIFCENKADVDDIHEYLLLKGVEAVAIHGGKDQEEREYAISSFKASKKDVL
Sbjct: 518 CLQKTPPPVLIFCENKADVDDIHEYLLLKGVEAVAIHGGKDQEEREYAISSFKASKKDVL 577

Query: 361 VATDVASKGLGFPDIQHVINYDMPAEIENYVHRIGRTGRCGKTGIATTFINKNQSETTLL 420
           VATDVASKGL FPDIQHVINYDMPAEIENYVHRIGRTGRCGKTGIATTFINKNQSETTLL
Sbjct: 578 VATDVASKGLDFPDIQHVINYDMPAEIENYVHRIGRTGRCGKTGIATTFINKNQSETTLL 637

Query: 421 DLKHLLQEAKQRIPPVLAELNDPMEDVEAITNASGVKGCAYCGGLGHRIRDCPK 455
           DLKHLLQEAKQRIPPVLAELNDPMEDVEAITNASGVKGCAYCGGLGHRIRDCPK
Sbjct: 638 DLKHLLQEAKQRIPPVLAELNDPMEDVEAITNASGVKGCAYCGGLGHRIRDCPK 691

[Close]

BLAST of CmaCh17G008760 vs. NCBI nr
Match: gi|659122435|ref|XP_008461142.1| (PREDICTED: DEAD-box ATP-dependent RNA helicase 35 [Cucumis melo])

HSP 1 Score: 880.9 bits (2275), Expect = 1.1e-252
Identity = 446/474 (94.09%), Postives = 449/474 (94.73%), Query Frame = 1


Query: 1   MSVRELAKGITYIEPLLTGWKPPLPIRRMSRKACDLIRKQWHIIVDGDDIPLPINNFKDM 60
           MSVRELAKGITY EPLLTGWKPPLPIRRM +KACDLIRKQWHIIVDGD+IP PI NFKDM
Sbjct: 98  MSVRELAKGITYTEPLLTGWKPPLPIRRMPKKACDLIRKQWHIIVDGDEIPPPIKNFKDM 157

Query: 61  RLPEPVLKKLEEKGIVQPTPIQVQGLPVILSGRDMIGIAFTGSGKTLVFVLPLIMIALQE 120
           RLPEPVLKKL+EKGIVQPTPIQVQGLPVILSGRDMIGIAFTGSGKTLVFVLPLIMIALQE
Sbjct: 158 RLPEPVLKKLKEKGIVQPTPIQVQGLPVILSGRDMIGIAFTGSGKTLVFVLPLIMIALQE 217

Query: 121 E--------------------ELARQTYEVVEQFLIPMKEAGYPELRPLLCIGGVDMRSQ 180
           E                    ELARQTYEVVEQFLIPMKEAGYPELRPLLCIGGVDMRSQ
Sbjct: 218 EVMMPIVSGEGPFGLIICPSRELARQTYEVVEQFLIPMKEAGYPELRPLLCIGGVDMRSQ 277

Query: 181 IEVVKKGVHIVVATPGRLKDMLAKKKMNLDNCRYLTLDEADRLVDLGFEDDIREVFDHFK 240
           IEVVKKGVHIVVATPGRLKDMLAKKKMNLDNCRYLTLDEADRLVDLGFEDDIREVFDHFK
Sbjct: 278 IEVVKKGVHIVVATPGRLKDMLAKKKMNLDNCRYLTLDEADRLVDLGFEDDIREVFDHFK 337

Query: 241 AQRQTLLFSATMPTKIQNFARSALVKPVTVNVGRAGAANLDVIQEVEYVKQEAKIVYLLE 300
           AQRQTLLFSATMPTKIQNFARSALVKPVTVNVGRAGAANLDVIQEVEYVKQEAKIVYLLE
Sbjct: 338 AQRQTLLFSATMPTKIQNFARSALVKPVTVNVGRAGAANLDVIQEVEYVKQEAKIVYLLE 397

Query: 301 CLQKTPPPVLIFCENKADVDDIHEYLLLKGVEAVAIHGGKDQEEREYAISSFKASKKDVL 360
           CLQKTPPPVLIFCENKADVDDIHEYLLLKGVEAVAIHGGKDQEEREYAISSFKASKKDVL
Sbjct: 398 CLQKTPPPVLIFCENKADVDDIHEYLLLKGVEAVAIHGGKDQEEREYAISSFKASKKDVL 457

Query: 361 VATDVASKGLGFPDIQHVINYDMPAEIENYVHRIGRTGRCGKTGIATTFINKNQSETTLL 420
           VATDVASKGL FPDIQHVINYDMPAEIENYVHRIGRTGRCGKTGIATTFINKNQSETTLL
Sbjct: 458 VATDVASKGLDFPDIQHVINYDMPAEIENYVHRIGRTGRCGKTGIATTFINKNQSETTLL 517

Query: 421 DLKHLLQEAKQRIPPVLAELNDPMEDVEAITNASGVKGCAYCGGLGHRIRDCPK 455
           DLKHLLQEAKQRIPPVLAELNDPMEDVEAITNASGVKGCAYCGGLGHRIRDCPK
Sbjct: 518 DLKHLLQEAKQRIPPVLAELNDPMEDVEAITNASGVKGCAYCGGLGHRIRDCPK 571

[Close]

BLAST of CmaCh17G008760 vs. NCBI nr
Match: gi|1009129216|ref|XP_015881647.1| (PREDICTED: DEAD-box ATP-dependent RNA helicase 35 isoform X1 [Ziziphus jujuba])

HSP 1 Score: 865.1 bits (2234), Expect = 6.1e-248
Identity = 435/474 (91.77%), Postives = 444/474 (93.67%), Query Frame = 1


Query: 1   MSVRELAKGITYIEPLLTGWKPPLPIRRMSRKACDLIRKQWHIIVDGDDIPLPINNFKDM 60
           MSVRELAKGITY EPL TGWKPPLPIRRMSRK CDLIRKQWHIIVDGDDIP PI NFKDM
Sbjct: 88  MSVRELAKGITYSEPLPTGWKPPLPIRRMSRKQCDLIRKQWHIIVDGDDIPPPIKNFKDM 147

Query: 61  RLPEPVLKKLEEKGIVQPTPIQVQGLPVILSGRDMIGIAFTGSGKTLVFVLPLIMIALQE 120
           R PEP+LKKL+ KGIVQPTPIQVQGLPVILSGRDMIGIAFTGSGKTLVFVLPLIM+ALQE
Sbjct: 148 RFPEPILKKLKAKGIVQPTPIQVQGLPVILSGRDMIGIAFTGSGKTLVFVLPLIMVALQE 207

Query: 121 E--------------------ELARQTYEVVEQFLIPMKEAGYPELRPLLCIGGVDMRSQ 180
           E                    ELARQTYEVVEQFLIPMKEAGYPELRPLLCIGGVDMRSQ
Sbjct: 208 EIIMPIAPGEGPFGLIVCPSRELARQTYEVVEQFLIPMKEAGYPELRPLLCIGGVDMRSQ 267

Query: 181 IEVVKKGVHIVVATPGRLKDMLAKKKMNLDNCRYLTLDEADRLVDLGFEDDIREVFDHFK 240
           +EVVKKGVHIVVATPGRLKD+LAKKKMNLDNCRYLTLDEADRLVDLGFEDDIREVFDHFK
Sbjct: 268 LEVVKKGVHIVVATPGRLKDLLAKKKMNLDNCRYLTLDEADRLVDLGFEDDIREVFDHFK 327

Query: 241 AQRQTLLFSATMPTKIQNFARSALVKPVTVNVGRAGAANLDVIQEVEYVKQEAKIVYLLE 300
           AQRQTLLFSATMP+KIQNFAR+ALVKPVTVNVGRAGAANLDVIQEVEYVKQEAKIVYLLE
Sbjct: 328 AQRQTLLFSATMPSKIQNFARNALVKPVTVNVGRAGAANLDVIQEVEYVKQEAKIVYLLE 387

Query: 301 CLQKTPPPVLIFCENKADVDDIHEYLLLKGVEAVAIHGGKDQEEREYAISSFKASKKDVL 360
           CLQKTPPPVLIFCENKADVDDIHEYLLLKGVE VAIHGGKDQEEREYAISSFKA KKDVL
Sbjct: 388 CLQKTPPPVLIFCENKADVDDIHEYLLLKGVEGVAIHGGKDQEEREYAISSFKAGKKDVL 447

Query: 361 VATDVASKGLGFPDIQHVINYDMPAEIENYVHRIGRTGRCGKTGIATTFINKNQSETTLL 420
           VATDVASKGL FPDIQHVINYDMPAEIENYVHRIGRTGRCGKTGIATTFINKNQSETTLL
Sbjct: 448 VATDVASKGLDFPDIQHVINYDMPAEIENYVHRIGRTGRCGKTGIATTFINKNQSETTLL 507

Query: 421 DLKHLLQEAKQRIPPVLAELNDPMEDVEAITNASGVKGCAYCGGLGHRIRDCPK 455
           DLKHLLQEAKQRIPPVLAELNDPMEDV+AIT+ASGVKGCAYCGGLGHRIRDCPK
Sbjct: 508 DLKHLLQEAKQRIPPVLAELNDPMEDVDAITSASGVKGCAYCGGLGHRIRDCPK 561

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BLAST of CmaCh17G008760 vs. NCBI nr
Match: gi|223531759|gb|EEF33579.1| (dead box ATP-dependent RNA helicase, putative [Ricinus communis])

HSP 1 Score: 861.7 bits (2225), Expect = 6.7e-247
Identity = 433/474 (91.35%), Postives = 442/474 (93.25%), Query Frame = 1


Query: 1   MSVRELAKGITYIEPLLTGWKPPLPIRRMSRKACDLIRKQWHIIVDGDDIPLPINNFKDM 60
           MSVRELAKGITY EPLLTGWKPPL IRRMSRK CD IRKQWHIIVDG+DIP PI NFK M
Sbjct: 1   MSVRELAKGITYTEPLLTGWKPPLQIRRMSRKQCDAIRKQWHIIVDGEDIPPPIKNFKSM 60

Query: 61  RLPEPVLKKLEEKGIVQPTPIQVQGLPVILSGRDMIGIAFTGSGKTLVFVLPLIMIALQE 120
           R PEP+LKKL++KGIVQPTPIQVQGLPVIL+GRDMIGIAFTGSGKTLVFVLP+IM+ALQE
Sbjct: 61  RFPEPILKKLKDKGIVQPTPIQVQGLPVILTGRDMIGIAFTGSGKTLVFVLPMIMVALQE 120

Query: 121 E--------------------ELARQTYEVVEQFLIPMKEAGYPELRPLLCIGGVDMRSQ 180
           E                    ELARQTYEVVEQFLIPMKEAGYPELRPLLCIGGVDMRSQ
Sbjct: 121 EIMMPIAPGEGPFGLIICPSRELARQTYEVVEQFLIPMKEAGYPELRPLLCIGGVDMRSQ 180

Query: 181 IEVVKKGVHIVVATPGRLKDMLAKKKMNLDNCRYLTLDEADRLVDLGFEDDIREVFDHFK 240
           +EVVKKGVHIVVATPGRLKDMLAKKKMNLDNCRYLTLDEADRLVDLGFEDDIREVFDHFK
Sbjct: 181 LEVVKKGVHIVVATPGRLKDMLAKKKMNLDNCRYLTLDEADRLVDLGFEDDIREVFDHFK 240

Query: 241 AQRQTLLFSATMPTKIQNFARSALVKPVTVNVGRAGAANLDVIQEVEYVKQEAKIVYLLE 300
           AQRQTLLFSATMPTKIQNFARSALVKPVTVNVGRAGAANLDVIQEVEYVKQEAKIVYLLE
Sbjct: 241 AQRQTLLFSATMPTKIQNFARSALVKPVTVNVGRAGAANLDVIQEVEYVKQEAKIVYLLE 300

Query: 301 CLQKTPPPVLIFCENKADVDDIHEYLLLKGVEAVAIHGGKDQEEREYAISSFKASKKDVL 360
           CLQKTPPPVLIFCENKADVDDIHEYLLLKGVEAVAIHGGKDQEEREYAISSFKA KKDVL
Sbjct: 301 CLQKTPPPVLIFCENKADVDDIHEYLLLKGVEAVAIHGGKDQEEREYAISSFKAGKKDVL 360

Query: 361 VATDVASKGLGFPDIQHVINYDMPAEIENYVHRIGRTGRCGKTGIATTFINKNQSETTLL 420
           VATDVASKGL FPDIQHVINYDMPAEIENYVHRIGRTGRCGKTGIATTFINKNQSETTLL
Sbjct: 361 VATDVASKGLDFPDIQHVINYDMPAEIENYVHRIGRTGRCGKTGIATTFINKNQSETTLL 420

Query: 421 DLKHLLQEAKQRIPPVLAELNDPMEDVEAITNASGVKGCAYCGGLGHRIRDCPK 455
           DLKHLLQEAKQRIPPVLAELNDPMED + ITNASGVKGCAYCGGLGHRIRDCPK
Sbjct: 421 DLKHLLQEAKQRIPPVLAELNDPMEDGDTITNASGVKGCAYCGGLGHRIRDCPK 474

The following BLAST results are available for this feature:

BLAST of CmaCh17G008760 vs. Swiss-Prot


Match Name	E-value	Identity	Description
RH35_ARATH	2.8e-237	87.76	DEAD-box ATP-dependent RNA helicase 35 OS=Arabidopsis thaliana GN=RH35 PE=2 SV=1	[more]
RH35A_ORYSJ	2.6e-230	82.70	DEAD-box ATP-dependent RNA helicase 35A OS=Oryza sativa subsp. japonica GN=Os02g...	[more]
RH43_ARATH	2.8e-221	81.65	Putative DEAD-box ATP-dependent RNA helicase 43 OS=Arabidopsis thaliana GN=RH43 ...	[more]
RH35B_ORYSJ	2.9e-213	75.97	DEAD-box ATP-dependent RNA helicase 35B OS=Oryza sativa subsp. japonica GN=Os06g...	[more]
DDX41_MOUSE	1.8e-175	65.19	Probable ATP-dependent RNA helicase DDX41 OS=Mus musculus GN=Ddx41 PE=1 SV=2	[more]

BLAST of CmaCh17G008760 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K6A2_CUCSA	7.5e-253	94.09	Uncharacterized protein OS=Cucumis sativus GN=Csa_7G432260 PE=4 SV=1	[more]
B9SS37_RICCO	4.7e-247	91.35	Dead box ATP-dependent RNA helicase, putative OS=Ricinus communis GN=RCOM_039564...	[more]
A0A067E841_CITSI	1.4e-246	90.51	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g007831mg PE=4 SV=1	[more]
V4UMQ8_9ROSI	3.0e-246	90.30	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10025231mg PE=4 SV=1	[more]
A5B7F0_VITVI	1.2e-245	90.51	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_09s0002g08120 PE=4 SV=...	[more]

BLAST of CmaCh17G008760 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G51280.1	1.6e-238	87.76	DEAD-box protein abstrakt, putative	[more]
AT4G33370.1	1.6e-222	81.65	DEA(D/H)-box RNA helicase family protein	[more]
AT1G55150.1	3.9e-75	39.55	DEA(D/H)-box RNA helicase family protein	[more]
AT2G47330.1	3.3e-74	39.66	P-loop containing nucleoside triphosphate hydrolases superfamily pro...	[more]
AT5G63120.2	7.3e-74	38.54	P-loop containing nucleoside triphosphate hydrolases superfamily pro...	[more]

BLAST of CmaCh17G008760 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449436164\|ref\|XP_004135864.1\|	1.1e-252	94.09	PREDICTED: DEAD-box ATP-dependent RNA helicase 35 [Cucumis sativus]	[more]
gi\|700190012\|gb\|KGN45245.1\|	1.1e-252	94.09	hypothetical protein Csa_7G432260 [Cucumis sativus]	[more]
gi\|659122435\|ref\|XP_008461142.1\|	1.1e-252	94.09	PREDICTED: DEAD-box ATP-dependent RNA helicase 35 [Cucumis melo]	[more]
gi\|1009129216\|ref\|XP_015881647.1\|	6.1e-248	91.77	PREDICTED: DEAD-box ATP-dependent RNA helicase 35 isoform X1 [Ziziphus jujuba]	[more]
gi\|223531759\|gb\|EEF33579.1\|	6.7e-247	91.35	dead box ATP-dependent RNA helicase, putative [Ricinus communis]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR001650	Helicase_C
IPR001878	Znf_CCHC
IPR011545	DEAD/DEAH_box_helicase_dom
IPR014001	Helicase_ATP-bd
IPR014014	RNA_helicase_DEAD_Q_motif
IPR027417	P-loop_NTPase

Vocabulary: **Molecular Function**
Term	Definition
GO:0003676	nucleic acid binding
GO:0008270	zinc ion binding
GO:0005524	ATP binding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0008152	metabolic process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0004386	helicase activity
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0008270	zinc ion binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh17G008760.1	CmaCh17G008760.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001650	Helicase, C-terminal	PFAM	PF00271	Helicase_C	coord: 274..381 score: 2.8
IPR001650	Helicase, C-terminal	SMART	SM00490	helicmild6	coord: 300..381 score: 1.2
IPR001650	Helicase, C-terminal	PROFILE	PS51194	HELICASE_CTER	coord: 261..421 score: 22
IPR001878	Zinc finger, CCHC-type	GENE3D	G3DSA:4.10.60.10		coord: 439..457 score: 3.
IPR001878	Zinc finger, CCHC-type	PFAM	PF00098	zf-CCHC	coord: 438..454 score: 1.
IPR001878	Zinc finger, CCHC-type	SMART	SM00343	c2hcfinal6	coord: 438..454 score: 0.
IPR001878	Zinc finger, CCHC-type	PROFILE	PS50158	ZF_CCHC	coord: 439..454 score: 9
IPR001878	Zinc finger, CCHC-type	unknown	SSF57756	Retrovirus zinc finger-like domains	coord: 438..456 score: 2.7
IPR011545	DEAD/DEAH box helicase domain	PFAM	PF00270	DEAD	coord: 79..238 score: 2.2
IPR014001	Helicase superfamily 1/2, ATP-binding domain	SMART	SM00487	ultradead3	coord: 74..265 score: 2.0
IPR014001	Helicase superfamily 1/2, ATP-binding domain	PROFILE	PS51192	HELICASE_ATP_BIND_1	coord: 86..250 score: 2
IPR014014	RNA helicase, DEAD-box type, Q motif	PROFILE	PS51195	Q_MOTIF	coord: 55..83 score: 10
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	G3DSA:3.40.50.300		coord: 39..255 score: 9.3E-67coord: 256..419 score: 3.3
IPR027417	P-loop containing nucleoside triphosphate hydrolase	unknown	SSF52540	P-loop containing nucleoside triphosphate hydrolases	coord: 121..396 score: 1.33E-61coord: 91..134 score: 1.0
None	No IPR available	unknown	Coil	Coil	coord: 392..412 scor
None	No IPR available	PANTHER	PTHR24031	RNA HELICASE	coord: 8..454 score:
None	No IPR available	PANTHER	PTHR24031:SF266	DEAD-BOX ATP-DEPENDENT RNA HELICASE 35-RELATED	coord: 8..454 score:

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh17G008760	Cucsa.105640	Cucumber (Gy14) v1	cgycmaB0237
CmaCh17G008760	CmoCh08G006010	Cucurbita moschata (Rifu)	cmacmoB374
CmaCh17G008760	Cp4.1LG17g08670	Cucurbita pepo (Zucchini)	cmacpeB376
CmaCh17G008760	CsaV3_7G032190	Cucumber (Chinese Long) v3	cmacucB0462
CmaCh17G008760	Cla97C09G165330	Watermelon (97103) v2	cmawmbB387
CmaCh17G008760	CsGy7G018650	Cucumber (Gy14) v2	cgybcmaB925
CmaCh17G008760	Carg09602	Silver-seed gourd	carcmaB1419
CmaCh17G008760	Carg23133	Silver-seed gourd	carcmaB0192

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmaCh17G008760	CmaCh08G006110	Cucurbita maxima (Rimu)	cmacmaB382

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh17G008760	Watermelon (97103) v2	cmawmbB362
CmaCh17G008760	Watermelon (97103) v2	cmawmbB382
CmaCh17G008760	Wax gourd	cmawgoB0487
CmaCh17G008760	Cucurbita maxima (Rimu)	cmacmaB175
CmaCh17G008760	Cucurbita maxima (Rimu)	cmacmaB360
CmaCh17G008760	Cucurbita maxima (Rimu)	cmacmaB368
CmaCh17G008760	Cucurbita moschata (Rifu)	cmacmoB353
CmaCh17G008760	Cucurbita moschata (Rifu)	cmacmoB361
CmaCh17G008760	Wild cucumber (PI 183967)	cmacpiB392
CmaCh17G008760	Cucumber (Chinese Long) v2	cmacuB388
CmaCh17G008760	Melon (DHL92) v3.5.1	cmameB326
CmaCh17G008760	Melon (DHL92) v3.5.1	cmameB348
CmaCh17G008760	Watermelon (Charleston Gray)	cmawcgB306
CmaCh17G008760	Watermelon (Charleston Gray)	cmawcgB332
CmaCh17G008760	Watermelon (97103) v1	cmawmB328
CmaCh17G008760	Watermelon (97103) v1	cmawmB339
CmaCh17G008760	Cucurbita pepo (Zucchini)	cmacpeB399
CmaCh17G008760	Cucurbita pepo (Zucchini)	cmacpeB369
CmaCh17G008760	Cucurbita pepo (Zucchini)	cmacpeB371
CmaCh17G008760	Bottle gourd (USVL1VR-Ls)	cmalsiB343
CmaCh17G008760	Bottle gourd (USVL1VR-Ls)	cmalsiB348
CmaCh17G008760	Cucumber (Gy14) v2	cgybcmaB196
CmaCh17G008760	Cucumber (Gy14) v2	cgybcmaB502
CmaCh17G008760	Melon (DHL92) v3.6.1	cmamedB379
CmaCh17G008760	Melon (DHL92) v3.6.1	cmamedB402
CmaCh17G008760	Silver-seed gourd	carcmaB0277
CmaCh17G008760	Silver-seed gourd	carcmaB0799
CmaCh17G008760	Cucumber (Chinese Long) v3	cmacucB0423
CmaCh17G008760	Cucumber (Chinese Long) v3	cmacucB0436