CmaCh17G006940 (gene) Cucurbita maxima (Rimu)

NameCmaCh17G006940
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu))
DescriptionUnknown protein
LocationCma_Chr17 : 5751598 .. 5752665 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTAGTGCTCGACAAGCGAATGTCATTGATTACCGTGTAATTTTATGATTTTGTCACCGTTGTAATCTACCATGTTGTGTTTGTGTAAGTATCAGGTCTTTTTTACCTAAACTGGTTGTAGTTGTTACTGCATGCATGTTCTCGAGATATTTGCAAATCTATGAAAAAAACATATGGATATATTTTTTTTTATCTAAAAAAAATTAAATTTTTTTAGATCCCAATTAAAAATATATGTATATAAAATGAAATAAAATATATTAATTGAATCCATCTCCTAGTATTTTAGGTGTTTATGTTGAAATTGACATTGACCACGCTAGACATTAAACAATTTGGGATAAGATAAGTTGTTCGTTGAGCCAAATAAAATTTCAAAATTAAATACTTTAACCGAACTAATCCAAACCTCATTTTAAATGTTGTTAATGAATTCAAAATATATCTACGAGGTTACCCACTAATATTTATTCAAATATCGTTTTTAACTGGTTCGATCTTAAACTTACTCTAAAACACATAAATTAAATTAAAAAAAAATTAAATGAATCATTACCTACTAATTCATAATAAAAAAAAAAAAATAATTACTTGTTAGTTTGTTCTTGAATAGGTTCAAACTTGATCGTAACTTTACAAGCTATGGGTAACATGATCTAGAGTCATATGAGTAGAAAGACATTTAAAACACGTCAATATGTAACTGACGAGCTAAAGGGAGGAAAAAAAATCGTTGGTGGTTGTTTAAACATGTCGATGATGGAGATTCGAATTTTATAGGTATGGGTCGGGGCAAAGTTGCTTGTTAAATCCATCTCATATAATATATGAGATTTCATCGTAATTTGAGAATAAAACCGTTATTAATCGTCCATTAGTATTGTCGCATACTTATTGGAGACACAAGCACGAGGTGATTGGAGAAAACGTTAGAATCGTTGTAGGACTCTTTTTGCAAGTCTTATCATCGTAAAACTATAGATCTTCAACAAAGAAAACTCACATCACAATTGTGTTTGTAAACCTATTTTGTGTCGTTTTGACAATCGCACGTCATCCAACGTGA

mRNA sequence

ATGGTAGTGCTCGACAAGCGAATGTCATTGATTACCGTGTTCAAACTTGATCGTAACTTTACAAGCTATGGGTATGGGTCGGGGCAAAGTTGCTTGTTAAATCCATCTCATATAATATATGAGATTTCATCATCTTCAACAAAGAAAACTCACATCACAATTGTGTTTGTAAACCTATTTTGTGTCGTTTTGACAATCGCACGTCATCCAACGTGA

Coding sequence (CDS)

ATGGTAGTGCTCGACAAGCGAATGTCATTGATTACCGTGTTCAAACTTGATCGTAACTTTACAAGCTATGGGTATGGGTCGGGGCAAAGTTGCTTGTTAAATCCATCTCATATAATATATGAGATTTCATCATCTTCAACAAAGAAAACTCACATCACAATTGTGTTTGTAAACCTATTTTGTGTCGTTTTGACAATCGCACGTCATCCAACGTGA

Protein sequence

MVVLDKRMSLITVFKLDRNFTSYGYGSGQSCLLNPSHIIYEISSSSTKKTHITIVFVNLFCVVLTIARHPT
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh17G006940.1CmaCh17G006940.1mRNA


Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePROFILEPS51257PROKAR_LIPOPROTEINcoord: 1..31
score:

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CmaCh17G006940Cucurbita pepo (Zucchini)cmacpeB399
CmaCh17G006940Cucurbita pepo (Zucchini)cmacpeB371
CmaCh17G006940Cucurbita pepo (Zucchini)cmacpeB376
CmaCh17G006940Cucurbita pepo (Zucchini)cmacpeB395
CmaCh17G006940Cucurbita pepo (Zucchini)cmacpeB400
CmaCh17G006940Cucurbita pepo (Zucchini)cmacpeB406
CmaCh17G006940Bottle gourd (USVL1VR-Ls)cmalsiB345
CmaCh17G006940Bottle gourd (USVL1VR-Ls)cmalsiB358
CmaCh17G006940Bottle gourd (USVL1VR-Ls)cmalsiB361
CmaCh17G006940Cucumber (Gy14) v2cgybcmaB919
CmaCh17G006940Melon (DHL92) v3.6.1cmamedB372
CmaCh17G006940Melon (DHL92) v3.6.1cmamedB383
CmaCh17G006940Silver-seed gourdcarcmaB0122
CmaCh17G006940Silver-seed gourdcarcmaB0155
CmaCh17G006940Silver-seed gourdcarcmaB0840
CmaCh17G006940Silver-seed gourdcarcmaB1228
CmaCh17G006940Silver-seed gourdcarcmaB1419
CmaCh17G006940Cucumber (Chinese Long) v3cmacucB0456
CmaCh17G006940Watermelon (97103) v2cmawmbB361
CmaCh17G006940Watermelon (97103) v2cmawmbB365
CmaCh17G006940Watermelon (97103) v2cmawmbB382
CmaCh17G006940Watermelon (97103) v2cmawmbB389
CmaCh17G006940Wax gourdcmawgoB0488
CmaCh17G006940Wax gourdcmawgoB0499
CmaCh17G006940Cucurbita maxima (Rimu)cmacmaB096
CmaCh17G006940Cucurbita maxima (Rimu)cmacmaB136
CmaCh17G006940Cucurbita maxima (Rimu)cmacmaB245
CmaCh17G006940Cucurbita maxima (Rimu)cmacmaB360
CmaCh17G006940Cucurbita maxima (Rimu)cmacmaB383
CmaCh17G006940Cucumber (Gy14) v1cgycmaB0983
CmaCh17G006940Cucurbita moschata (Rifu)cmacmoB346
CmaCh17G006940Cucurbita moschata (Rifu)cmacmoB348
CmaCh17G006940Cucurbita moschata (Rifu)cmacmoB349
CmaCh17G006940Cucurbita moschata (Rifu)cmacmoB353
CmaCh17G006940Cucurbita moschata (Rifu)cmacmoB355
CmaCh17G006940Cucurbita moschata (Rifu)cmacmoB375
CmaCh17G006940Wild cucumber (PI 183967)cmacpiB387
CmaCh17G006940Cucumber (Chinese Long) v2cmacuB383
CmaCh17G006940Melon (DHL92) v3.5.1cmameB319
CmaCh17G006940Watermelon (Charleston Gray)cmawcgB308
CmaCh17G006940Watermelon (Charleston Gray)cmawcgB315
CmaCh17G006940Watermelon (Charleston Gray)cmawcgB332
CmaCh17G006940Watermelon (97103) v1cmawmB330
CmaCh17G006940Watermelon (97103) v1cmawmB339
CmaCh17G006940Watermelon (97103) v1cmawmB350