CmaCh17G006160 (gene) Cucurbita maxima (Rimu)

Overview
NameCmaCh17G006160
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu))
DescriptionTransport, ribosome-binding, bacterial, putative isoform 1
LocationCma_Chr17 : 5252434 .. 5257516 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
TCCGAAAACCACTGTCTGAAAGAAACGCAGGTTGAGTTCGGTGAAGTGGATAAGAGCGCGAGAGAGACGATGCAAATAGCCGCTACGAACTTCTTTCTTTCGGCAAACCCCAAGGTGAATCATTCCTTCTGTCCGGCTCTATTTATGTTTATCTTCCATTTACCGATCAACATTCAGAGAATCATATTCCGTATTCAATGATTAATAGATGCAATTTTTTACTTTGTTATTGGACTATATTGAGTGAGCAAGGAAGAACAGAGGTAGCAAACAATATAACACAAAGTATTATGTATTGACCAACTACAATCTGTGCTAACAGAGCTGTTGGTTTTCTGGGCAAAATATTTGAAGAGGAAAAAATCCCACATGGGAAAGGTCGTCTAAAGTGATGGATTTCACGTGTTATGTAGTGGTTTATTGCTACATTTTTGTCGGGTCTTAGTTAGAAACACTCTTAAGTCTTGGTTTCCTATACTAACTGAAGTTAAATTCCTTTGTGTTGTTTTGTTTGGGAGGGAATTTTGAGGGAGTGTTTTTGTAATTGGGGTAGGAGGGAGAATTCTATTTGATGATAATTCTTTTGGGGTTTCCTTTTTGGTGGGCCGGGATTTGTTTTCTAGTTTGGGAGTTTTCCACTTAAGTTCTCGTGTTCTTTGATTGTTCTTATTACTGAAGTTTTTTTTCTTCTTGTTCCTGTTCTGTGCTGATTTTTGGGACGTTCCATAAAAGTAAATGATGGGAATGTTGTTGTTTGGAGAGAAAGGAGGTTCAACATTGGTATTTGGGACATTTGGCCTCTGGTAGTTGACTGGCTTGCAAGTGTTCGTGTTAAGGTTTAACAATATTTGCTTGAAGTAGGAGTATTTGTGTGATAAGTTTTTTGTTACAAACCAAAAGCATGCTTTTAAGTCATCGAAGTTCGGAATATCCCCTCCGGTACCAAGGGCAGCAGTAGAAGCATCATATTCAACACTAATACCATTCAACAAATATTCAACCAAAAGTTCATTAATTATATGTTCACCAGTAATCAAGTTTTTTTACCATATGAAGTATATTTTAGTCTCTAGACTGGTTTGATCTTCAAGCTTCTTATTATGAATCTCTCCTCTCGGGTTCGGTGTCTAGCTTGAGAAGTATTGTTATACAATGTGCTGGGCACACCCCATTTAGCATTCATCATCATACTTCACTATTCTCGCTAGCATCTTTTCAGTCAGAAAAATAAAGCCAACTCACAGGCCATGACTGAACGATTATAATTTGTATACAATTTACTTCCATCTATATGCTTTCTAGATTGTTTGCAACAATAGCGCTTATTTTTCTGGGGATACGAAACGTGAGTATATTACTGAGAAAAAAGAGAAAAACAGCCTAGGGGTTGGGGAAGAGGGATTCCGCTCCCAACAACTACTAAAAGAGATATTTCCAATTGTAAAGGAGCATGGAAAGAGGACATGAGCTGAACATTTCAACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCAACATAAGAGGACTTATCTTCTAAAGTTCTTTGACTCCTTCCCGACCAAATATGCCATAGTAAGGCCCATAGCCACAAGGTTCCGCAAGACTTTCATCCTCTTTGCCAATTTCCTACCAGATAAAACTTTAAGGAGTCAATCATCCACTTGTTCGGACAGCAAGAAATGCCAATAACTTCAAACAGAAAAGCCCAACCTCTAGAGGTGACAGTGAAGAAAAAGATGAACAATAGATTCTTTGAGTTTCACAGTCAGAATGATTTGAAGATGAAAATGGTTTAAGGTTATGGACAATAACCGGATTTTGGTTTGGATTTGTGTCATTTGGTTGAGTTGTGGGGTGGGTGCTTGGTCCTGCTCAGGTTGTAGGAAGAACAGATGGAGCAGAACAGGTCCCACTAATTGAAGATGACAACATTTGCTAACGGCTACATTTGACACCAGCCGTTAGCAAATGTTTTGATGCTCTAAATGCTATGGATTGGGCAAGGAAGAAGAAATGCAGCAACAGAGAGTAGTAGAAGAAAGCAGTAGTGTAGGGCTGTGTAATAGCTCAATATAATATGTGCTACTCAACAACCTTCTATTTACCACATAATTATACTGTAGTAAAGAAAACCTAGCATTATCACCTCACACCCAAGTAATGAACTGAAATAAAAGAACATCACATCAGACATCTAGTATAGTGACATGTACGGTCATCTAAGGCCAGACATAGAAAATAACATCATACACCAAGAATTATCTGGTCCCATATTTTGTGGGTTTTGCTCGTGTTAGGGTTCATTTTTTTTATACATGATGTAGTTTTTTGAAATTTTTTTTTCTCTTTTTTTGAATGGTTGGTTTGTAGGATCTTCAATATGCCTACTTTGCTCACTTTTTTATTTTTTTTTATTTTTTTCATTTCTAATTATGGTTTCTCTGTTAATATTCATCTGAACTTTATTTCATTCTTATTCAACCTTCTTTCTTAATTGCAGGCTAAATATCATAAGCAGACAGCAGATTGCTTTACTCCAAATCTCACCAGCAAAAGCGTGTCTTTTCCCAGTCAAATGGGATATGGCAGCAGAAAAATTTCTGTGAGGTAATTTCTATTTAATTTTGCCAAATTATATGTTCCAAGGAGTTGTATAAGCCGAATTATGAAAGTTAGTCGTGTCCCTAATTAGGAAGACTTCAGCATCTAATTGATTTACTCTGAACCTTACTTTTATATGATGAAGCTGACTGGTTGACGATCAAAGTTAACGAAACATATAAACTCATAAAAGACTTTCTGTACTAGGAAATTTTGACTTCTAATCTGGATATATGAATGCTCACGAATTGCCTCATTTTTCTCAATTGGATGCTTCACATCCTGTCCTGTTATTTAGTCATTTCAAAATAGAAAGTTAACATGGGGTATCCCACCAATTCGCCATCAAGACCATAACTAAGTTTTGATATAATTTTTCTTTGCTGGATGAGCGAACCAACTTTTATCTAAAGGAAACTACAGAAAAGGTCCACAAAAGCAGGAACATACTAAACATAATTTCAAGAACAAATGGCAACTGGTTGTTATCAAATATTTGGATAGGAAGTTACCATTTGCTTTTTGTTAAATCTACTAAAACCCAAAAAAGATAGGCCATGGATTTAATATTTTATTGATTCAGAAATTAGCACGCTATCTAGGAAGTGAGTTATCAATAATAGTTAGGGAGGAAATAATATTTGCTTCTCTATGGTTGAGGCCCTTCATTGTGCGGTTCACTTGGAGGAGAGATTGCCTCTCTATGATTGAGGCTGTCCTCTTGAGTTCGCCCTTTTGTAGAATGGCCACGTGTTGTGGCAATCGAGCTTCATTTCTATTGCTTGAGATATTTGATTTGGGAGAATATTAGGATCTTTAGAGAGGTCGAAAAATCTAGGGAGGGGGTTTCGGGAGGGGGCTCGGTTTAATGCCTCTTCGTGGGCATCTGTTAATAGTCTCATTTGTAATTATGGTATTGGCATGATTTTGTTGGATTGAAGCCTTTTTTTTAAGTTAGTTGGGGCTCCTCCTTTTTTGTGTGCTGTTTTTTTGTATGCCCTTTTTTTCATTTTTTCTCAAACCATCGTGCCTAACGTCTTAATGATTTACTGTGGGTTTCTTTCTCTCAAAGTATTAAGAATATGATAAGTAGGAGTTGCCTACGTTCCTAATTATAAAAATTATTTTGTTCACCTTACAGTAAAAGTAACAGATATCTTCCTGCTGCTTGTGCTGCATTATCAGGTTAAAATGCTCGTCTCTTTGAAGAGAAATTTCAATATTCTCCATTTGTATGAGGACTATGTTAGCTAAAATCTTTAATTCTGTTGTGAGCAGAAGATGTGATTGTTTCTTCTTCTCAGTTTGAAGACTTCTCTGTCACTAAAGCTACAAATATCAATGAGAATAAAGAACTAAAGGTATGAAATACGGTGAGTTTTATTCTTAGATTCCTTATGTCTATAATCCTCAGATTACTATCTTTCAAATATTTTGTTTGTAGTTACTTCACTTAGACATTCAATTTAGTCTCTAAAAACAAGTTTAGTCCTTGCCATCTATTATCCATTAGTTATTTTAAAAGAATTGAAAAGAATCATAAAAAACTAATGGTAATGTTTGTAAAGATTTTAGAGGAAAATTTGAGGGACTACAATAGGATATTTGGAAGTTTAAGTATGAGGCAGGATTTAAACCTTTATTGAATTATGCACAACAATTTAATGCAGATTCAGGAACCATGTTTTATTTATTTGTTTGATTTTTTTTCTTGAGTTTGCAACCAGATCTGTATTGAGGTCTCTGGAGCCAAAACACGAGCAATTTTCGACAATGTGTTCAATGAAATGGTTGATAAAGCTCAGCCTATTCCAGGTTTTAGAAGAGTGAAAGGAGGTAATATCCAGAGGCATGTTTCTTATTCGAGGTGCTCATGGCTTTCATTTTTGTTTTCTCAAAATCGTTCTAATAATGTTGCTAGCACCATTGTTTTCGGCCGAGCTGTTGTATATTTTACACGCATGGTTAAGGTTACAGTTGATTGTGTCTTCATGTTAGAGAAATGGAAATGTTACTAA

mRNA sequence

TCCGAAAACCACTGTCTGAAAGAAACGCAGGTTGAGTTCGGTGAAGTGGATAAGAGCGCGAGAGAGACGATGCAAATAGCCGCTACGAACTTCTTTCTTTCGGCAAACCCCAAGGCTAAATATCATAAGCAGACAGCAGATTGCTTTACTCCAAATCTCACCAGCAAAAGCGTGTCTTTTCCCAGTCAAATGGGATATGGCAGCAGAAAAATTTCTGTGAGTAAAAGTAACAGATATCTTCCTGCTGCTTGTGCTGCATTATCAGAAGATGTGATTGTTTCTTCTTCTCAGTTTGAAGACTTCTCTGTCACTAAAGCTACAAATATCAATGAGAATAAAGAACTAAAGATCTGTATTGAGGTCTCTGGAGCCAAAACACGAGCAATTTTCGACAATGTGTTCAATGAAATGGTTGATAAAGCTCAGCCTATTCCAGGTTTTAGAAGAGTGAAAGGAGGTAATATCCAGAGGCATGTTTCTTATTCGAGGTGCTCATGGCTTTCATTTTTGTTTTCTCAAAATCGTTCTAATAATGTTGCTAGCACCATTGTTTTCGGCCGAGCTGTTGTATATTTTACACGCATGGTTAAGGTTACAGTTGATTGTGTCTTCATGTTAGAGAAATGGAAATGTTACTAA

Coding sequence (CDS)

ATGCAAATAGCCGCTACGAACTTCTTTCTTTCGGCAAACCCCAAGGCTAAATATCATAAGCAGACAGCAGATTGCTTTACTCCAAATCTCACCAGCAAAAGCGTGTCTTTTCCCAGTCAAATGGGATATGGCAGCAGAAAAATTTCTGTGAGTAAAAGTAACAGATATCTTCCTGCTGCTTGTGCTGCATTATCAGAAGATGTGATTGTTTCTTCTTCTCAGTTTGAAGACTTCTCTGTCACTAAAGCTACAAATATCAATGAGAATAAAGAACTAAAGATCTGTATTGAGGTCTCTGGAGCCAAAACACGAGCAATTTTCGACAATGTGTTCAATGAAATGGTTGATAAAGCTCAGCCTATTCCAGGTTTTAGAAGAGTGAAAGGAGGTAATATCCAGAGGCATGTTTCTTATTCGAGGTGCTCATGGCTTTCATTTTTGTTTTCTCAAAATCGTTCTAATAATGTTGCTAGCACCATTGTTTTCGGCCGAGCTGTTGTATATTTTACACGCATGGTTAAGGTTACAGTTGATTGTGTCTTCATGTTAGAGAAATGGAAATGTTACTAA

Protein sequence

MQIAATNFFLSANPKAKYHKQTADCFTPNLTSKSVSFPSQMGYGSRKISVSKSNRYLPAACAALSEDVIVSSSQFEDFSVTKATNINENKELKICIEVSGAKTRAIFDNVFNEMVDKAQPIPGFRRVKGGNIQRHVSYSRCSWLSFLFSQNRSNNVASTIVFGRAVVYFTRMVKVTVDCVFMLEKWKCY
Homology
[Close]
BLAST of CmaCh17G006160 vs. TrEMBL
Match: A0A0A0KBW0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G086150 PE=4 SV=1)

HSP 1 Score: 200.7 bits (509), Expect = 1.6e-48
Identity = 106/139 (76.26%), Postives = 115/139 (82.73%), Query Frame = 1 

Query: 1   MQIAATNFFLSANPKAKYHKQTADCFTPNLTSKSVSFPSQMGYGSRKISVSKSNRYLPAA 60
           MQIAA NFFLS NPKA YHKQT D FTPNLT   VSFPSQ+ YGSRKIS+SK+NRYLPAA
Sbjct: 1   MQIAAANFFLSVNPKAIYHKQTTDYFTPNLTCIGVSFPSQIRYGSRKISLSKNNRYLPAA 60

Query: 61  CAALSEDVIVSSSQFEDFSVTKATNINENKELKICIEVSGAKTRAIFDNVFNEMVDKAQP 120
           CA LSE+V VSSSQFEDFSVT  TN  ENKELKI +EVSGAKTRAIF+ VF+ MV +AQP
Sbjct: 61  CAVLSENVSVSSSQFEDFSVTNVTNTKENKELKIRVEVSGAKTRAIFNVVFDRMVAEAQP 120

Query: 121 IPGFRRVKGG---NIQRHV 137
           IPGFRRVKGG   NI R +
Sbjct: 121 IPGFRRVKGGKTPNIPRDI 139

[Close]
BLAST of CmaCh17G006160 vs. TrEMBL
Match: A0A061EIA3_THECC (Transport, ribosome-binding, bacterial, putative isoform 1 OS=Theobroma cacao GN=TCM_019901 PE=4 SV=1)

HSP 1 Score: 122.1 bits (305), Expect = 7.3e-25
Identity = 76/141 (53.90%), Postives = 92/141 (65.25%), Query Frame = 1 

Query: 1   MQIAATNFFLSANPKAKYHKQTADCFTPNLTSKSVSFPSQMGYGSRKISVSKSNRYLPAA 60
           M+IA     LS NPK   +KQ  D F PNL+     FP Q  Y + K    + + +L   
Sbjct: 1   MEIAVKTLSLSLNPKIISYKQVEDVFIPNLSCNRACFPPQKRYRALKYQGRERHVHLLTV 60

Query: 61  CAALS--EDVIVSSSQFEDFSVTKATNINENKELKICIEVSGAKTRAIFDNVFNEMVDKA 120
            A  S  EDV VSS QFEDF+VT A+ INEN+ELKI +E+SGAKTRAIFD+VF++MV  A
Sbjct: 61  HAVSSDLEDVGVSS-QFEDFNVTTAS-INENRELKISVEISGAKTRAIFDDVFDKMVAAA 120

Query: 121 QPIPGFRRVKGG---NIQRHV 137
           QPIPGFRRVKGG   NI R +
Sbjct: 121 QPIPGFRRVKGGKTPNIPRDI 139

[Close]
BLAST of CmaCh17G006160 vs. TrEMBL
Match: A0A061EIP8_THECC (Transport, ribosome-binding, bacterial, putative isoform 2 OS=Theobroma cacao GN=TCM_019901 PE=4 SV=1)

HSP 1 Score: 122.1 bits (305), Expect = 7.3e-25
Identity = 76/141 (53.90%), Postives = 92/141 (65.25%), Query Frame = 1 

Query: 1   MQIAATNFFLSANPKAKYHKQTADCFTPNLTSKSVSFPSQMGYGSRKISVSKSNRYLPAA 60
           M+IA     LS NPK   +KQ  D F PNL+     FP Q  Y + K    + + +L   
Sbjct: 1   MEIAVKTLSLSLNPKIISYKQVEDVFIPNLSCNRACFPPQKRYRALKYQGRERHVHLLTV 60

Query: 61  CAALS--EDVIVSSSQFEDFSVTKATNINENKELKICIEVSGAKTRAIFDNVFNEMVDKA 120
            A  S  EDV VSS QFEDF+VT A+ INEN+ELKI +E+SGAKTRAIFD+VF++MV  A
Sbjct: 61  HAVSSDLEDVGVSS-QFEDFNVTTAS-INENRELKISVEISGAKTRAIFDDVFDKMVAAA 120

Query: 121 QPIPGFRRVKGG---NIQRHV 137
           QPIPGFRRVKGG   NI R +
Sbjct: 121 QPIPGFRRVKGGKTPNIPRDI 139

[Close]
BLAST of CmaCh17G006160 vs. TrEMBL
Match: A0A061EK10_THECC (Transport, ribosome-binding, bacterial-like protein isoform 3 OS=Theobroma cacao GN=TCM_019901 PE=4 SV=1)

HSP 1 Score: 121.3 bits (303), Expect = 1.2e-24
Identity = 73/132 (55.30%), Postives = 88/132 (66.67%), Query Frame = 1 

Query: 1   MQIAATNFFLSANPKAKYHKQTADCFTPNLTSKSVSFPSQMGYGSRKISVSKSNRYLPAA 60
           M+IA     LS NPK   +KQ  D F PNL+     FP Q  Y + K    + + +L   
Sbjct: 1   MEIAVKTLSLSLNPKIISYKQVEDVFIPNLSCNRACFPPQKRYRALKYQGRERHVHLLTV 60

Query: 61  CAALS--EDVIVSSSQFEDFSVTKATNINENKELKICIEVSGAKTRAIFDNVFNEMVDKA 120
            A  S  EDV VSS QFEDF+VT A+ INEN+ELKI +E+SGAKTRAIFD+VF++MV  A
Sbjct: 61  HAVSSDLEDVGVSS-QFEDFNVTTAS-INENRELKISVEISGAKTRAIFDDVFDKMVAAA 120

Query: 121 QPIPGFRRVKGG 131
           QPIPGFRRVKGG
Sbjct: 121 QPIPGFRRVKGG 130

[Close]
BLAST of CmaCh17G006160 vs. TrEMBL
Match: V4VSL4_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10022254mg PE=4 SV=1)

HSP 1 Score: 115.5 bits (288), Expect = 6.8e-23
Identity = 71/141 (50.35%), Postives = 86/141 (60.99%), Query Frame = 1 

Query: 1   MQIAATNFFLSANPKAKYHKQTADCFTPNLTSKSVSFPSQMGYGSRKISVSKSNRYLPAA 60
           M+IA  +  L  NP+    +Q  D  TP ++SK   F  Q    +R     K+++Y P  
Sbjct: 1   MEIAVKSLSLGLNPRIVNRRQHFDVSTPRISSKRACFLPQTRCDTRNFLKRKNHKYCPPI 60

Query: 61  CAALS--EDVIVSSSQFEDFSVTKATNINENKELKICIEVSGAKTRAIFDNVFNEMVDKA 120
              LS  ED  VSSSQFEDF V   T  NE  ELKI +EVSGAKTRAIFD+VF++MV  A
Sbjct: 61  FVVLSAVEDAGVSSSQFEDF-VVSTTRTNEATELKIGVEVSGAKTRAIFDDVFDKMVAAA 120

Query: 121 QPIPGFRRVKGG---NIQRHV 137
           QPIPGFRRVKGG   NI R +
Sbjct: 121 QPIPGFRRVKGGKTPNIPRDI 140

[Close]
BLAST of CmaCh17G006160 vs. TAIR10
Match: AT2G30695.1 (AT2G30695.1 FUNCTIONS IN: molecular_function unknown)

HSP 1 Score: 72.0 bits (175), Expect = 4.4e-13
Identity = 39/85 (45.88%), Postives = 56/85 (65.88%), Query Frame = 1 

Query: 46  RKISVSKSNRYLPAACAALSEDVIVSSSQFEDFSVTKATNINENKELKICIEVSGAKTRA 105
           +K+    +NR   A CAA S+  + +SS+ E   +TK      N E+K+ ++VSG KT+ 
Sbjct: 40  QKLCTRATNRQFVAVCAAPSD--VETSSKDESVLITKVETETSN-EVKVHVQVSGEKTQT 99

Query: 106 IFDNVFNEMVDKAQPIPGFRRVKGG 131
           +F++VF +MV  AQPIPGFRRVKGG
Sbjct: 100 VFNHVFEKMVAAAQPIPGFRRVKGG 121

[Close]
BLAST of CmaCh17G006160 vs. NCBI nr
Match: gi|659120107|ref|XP_008460017.1| (PREDICTED: uncharacterized protein LOC103498958 isoform X2 [Cucumis melo])

HSP 1 Score: 206.5 bits (524), Expect = 4.2e-50
Identity = 106/134 (79.10%), Postives = 114/134 (85.07%), Query Frame = 1 

Query: 1   MQIAATNFFLSANPKAKYHKQTADCFTPNLTSKSVSFPSQMGYGSRKISVSKSNRYLPAA 60
           MQIAA NFFLSANPKA YHKQT D FTPNLT  SVSFPSQ+ YGS KIS+SK+NRYLPAA
Sbjct: 1   MQIAAANFFLSANPKAVYHKQTTDYFTPNLTCTSVSFPSQIKYGSSKISLSKNNRYLPAA 60

Query: 61  CAALSEDVIVSSSQFEDFSVTKATNINENKELKICIEVSGAKTRAIFDNVFNEMVDKAQP 120
           CA LSE+  VSSSQFEDFSVT  TN  ENKELKI +EVSG KTRAIF+ VF+ MV +AQP
Sbjct: 61  CAVLSENASVSSSQFEDFSVTNVTNTTENKELKIRVEVSGTKTRAIFNVVFDRMVAEAQP 120

Query: 121 IPGFRRVKGGNIQR 135
           IPGFRRVKGGNIQR
Sbjct: 121 IPGFRRVKGGNIQR 134

[Close]
BLAST of CmaCh17G006160 vs. NCBI nr
Match: gi|659120105|ref|XP_008460016.1| (PREDICTED: uncharacterized protein LOC103498958 isoform X1 [Cucumis melo])

HSP 1 Score: 206.5 bits (524), Expect = 4.2e-50
Identity = 106/134 (79.10%), Postives = 114/134 (85.07%), Query Frame = 1 

Query: 1   MQIAATNFFLSANPKAKYHKQTADCFTPNLTSKSVSFPSQMGYGSRKISVSKSNRYLPAA 60
           MQIAA NFFLSANPKA YHKQT D FTPNLT  SVSFPSQ+ YGS KIS+SK+NRYLPAA
Sbjct: 1   MQIAAANFFLSANPKAVYHKQTTDYFTPNLTCTSVSFPSQIKYGSSKISLSKNNRYLPAA 60

Query: 61  CAALSEDVIVSSSQFEDFSVTKATNINENKELKICIEVSGAKTRAIFDNVFNEMVDKAQP 120
           CA LSE+  VSSSQFEDFSVT  TN  ENKELKI +EVSG KTRAIF+ VF+ MV +AQP
Sbjct: 61  CAVLSENASVSSSQFEDFSVTNVTNTTENKELKIRVEVSGTKTRAIFNVVFDRMVAEAQP 120

Query: 121 IPGFRRVKGGNIQR 135
           IPGFRRVKGGNIQR
Sbjct: 121 IPGFRRVKGGNIQR 134

[Close]
BLAST of CmaCh17G006160 vs. NCBI nr
Match: gi|449445672|ref|XP_004140596.1| (PREDICTED: uncharacterized protein LOC101211587 isoform X2 [Cucumis sativus])

HSP 1 Score: 200.7 bits (509), Expect = 2.3e-48
Identity = 106/139 (76.26%), Postives = 115/139 (82.73%), Query Frame = 1 

Query: 1   MQIAATNFFLSANPKAKYHKQTADCFTPNLTSKSVSFPSQMGYGSRKISVSKSNRYLPAA 60
           MQIAA NFFLS NPKA YHKQT D FTPNLT   VSFPSQ+ YGSRKIS+SK+NRYLPAA
Sbjct: 1   MQIAAANFFLSVNPKAIYHKQTTDYFTPNLTCIGVSFPSQIRYGSRKISLSKNNRYLPAA 60

Query: 61  CAALSEDVIVSSSQFEDFSVTKATNINENKELKICIEVSGAKTRAIFDNVFNEMVDKAQP 120
           CA LSE+V VSSSQFEDFSVT  TN  ENKELKI +EVSGAKTRAIF+ VF+ MV +AQP
Sbjct: 61  CAVLSENVSVSSSQFEDFSVTNVTNTKENKELKIRVEVSGAKTRAIFNVVFDRMVAEAQP 120

Query: 121 IPGFRRVKGG---NIQRHV 137
           IPGFRRVKGG   NI R +
Sbjct: 121 IPGFRRVKGGKTPNIPRDI 139

[Close]
BLAST of CmaCh17G006160 vs. NCBI nr
Match: gi|778711466|ref|XP_011656735.1| (PREDICTED: uncharacterized protein LOC101211587 isoform X1 [Cucumis sativus])

HSP 1 Score: 200.7 bits (509), Expect = 2.3e-48
Identity = 106/139 (76.26%), Postives = 115/139 (82.73%), Query Frame = 1 

Query: 1   MQIAATNFFLSANPKAKYHKQTADCFTPNLTSKSVSFPSQMGYGSRKISVSKSNRYLPAA 60
           MQIAA NFFLS NPKA YHKQT D FTPNLT   VSFPSQ+ YGSRKIS+SK+NRYLPAA
Sbjct: 1   MQIAAANFFLSVNPKAIYHKQTTDYFTPNLTCIGVSFPSQIRYGSRKISLSKNNRYLPAA 60

Query: 61  CAALSEDVIVSSSQFEDFSVTKATNINENKELKICIEVSGAKTRAIFDNVFNEMVDKAQP 120
           CA LSE+V VSSSQFEDFSVT  TN  ENKELKI +EVSGAKTRAIF+ VF+ MV +AQP
Sbjct: 61  CAVLSENVSVSSSQFEDFSVTNVTNTKENKELKIRVEVSGAKTRAIFNVVFDRMVAEAQP 120

Query: 121 IPGFRRVKGG---NIQRHV 137
           IPGFRRVKGG   NI R +
Sbjct: 121 IPGFRRVKGGKTPNIPRDI 139

[Close]
BLAST of CmaCh17G006160 vs. NCBI nr
Match: gi|659120109|ref|XP_008460018.1| (PREDICTED: uncharacterized protein LOC103498958 isoform X3 [Cucumis melo])

HSP 1 Score: 199.5 bits (506), Expect = 5.2e-48
Identity = 105/139 (75.54%), Postives = 114/139 (82.01%), Query Frame = 1 

Query: 1   MQIAATNFFLSANPKAKYHKQTADCFTPNLTSKSVSFPSQMGYGSRKISVSKSNRYLPAA 60
           MQIAA NFFLSANPKA YHKQT D FTPNLT  SVSFPSQ+ YGS KIS+SK+NRYLPAA
Sbjct: 1   MQIAAANFFLSANPKAVYHKQTTDYFTPNLTCTSVSFPSQIKYGSSKISLSKNNRYLPAA 60

Query: 61  CAALSEDVIVSSSQFEDFSVTKATNINENKELKICIEVSGAKTRAIFDNVFNEMVDKAQP 120
           CA LSE+  VSSSQFEDFSVT  TN  ENKELKI +EVSG KTRAIF+ VF+ MV +AQP
Sbjct: 61  CAVLSENASVSSSQFEDFSVTNVTNTTENKELKIRVEVSGTKTRAIFNVVFDRMVAEAQP 120

Query: 121 IPGFRRVKGG---NIQRHV 137
           IPGFRRVKGG   NI R +
Sbjct: 121 IPGFRRVKGGKTPNIPRDI 139

The following BLAST results are available for this feature:
BLAST of CmaCh17G006160 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CmaCh17G006160 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KBW0_CUCSA1.6e-4876.26Uncharacterized protein OS=Cucumis sativus GN=Csa_6G086150 PE=4 SV=1[more]
A0A061EIA3_THECC7.3e-2553.90Transport, ribosome-binding, bacterial, putative isoform 1 OS=Theobroma cacao GN... [more]
A0A061EIP8_THECC7.3e-2553.90Transport, ribosome-binding, bacterial, putative isoform 2 OS=Theobroma cacao GN... [more]
A0A061EK10_THECC1.2e-2455.30Transport, ribosome-binding, bacterial-like protein isoform 3 OS=Theobroma cacao... [more]
V4VSL4_9ROSI6.8e-2350.35Uncharacterized protein OS=Citrus clementina GN=CICLE_v10022254mg PE=4 SV=1[more]
BLAST of CmaCh17G006160 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G30695.14.4e-1345.88 FUNCTIONS IN: molecular_function unknown[more]
BLAST of CmaCh17G006160 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659120107|ref|XP_008460017.1|4.2e-5079.10PREDICTED: uncharacterized protein LOC103498958 isoform X2 [Cucumis melo][more]
gi|659120105|ref|XP_008460016.1|4.2e-5079.10PREDICTED: uncharacterized protein LOC103498958 isoform X1 [Cucumis melo][more]
gi|449445672|ref|XP_004140596.1|2.3e-4876.26PREDICTED: uncharacterized protein LOC101211587 isoform X2 [Cucumis sativus][more]
gi|778711466|ref|XP_011656735.1|2.3e-4876.26PREDICTED: uncharacterized protein LOC101211587 isoform X1 [Cucumis sativus][more]
gi|659120109|ref|XP_008460018.1|5.2e-4875.54PREDICTED: uncharacterized protein LOC103498958 isoform X3 [Cucumis melo][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0071840 cellular component organization or biogenesis
biological_process GO:0006457 protein folding
biological_process GO:0015031 protein transport
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh17G006160.1CmaCh17G006160.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR30560TRIGGER FACTOR CHAPERONE AND PEPTIDYL-PROLYL CIS/TRANS ISOMERASEcoord: 9..138
score: 1.7
NoneNo IPR availablePANTHERPTHR30560:SF4SUBFAMILY NOT NAMEDcoord: 9..138
score: 1.7

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmaCh17G006160Csa6G086150Cucumber (Chinese Long) v2cmacuB374
CmaCh17G006160MELO3C022428Melon (DHL92) v3.5.1cmameB317
CmaCh17G006160CmoCh17G006010Cucurbita moschata (Rifu)cmacmoB353
CmaCh17G006160MELO3C022428.2Melon (DHL92) v3.6.1cmamedB369
CmaCh17G006160Bhi12G002194Wax gourdcmawgoB0469
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CmaCh17G006160Cucurbita pepo (Zucchini)cmacpeB371
CmaCh17G006160Cucurbita pepo (Zucchini)cmacpeB394
CmaCh17G006160Bottle gourd (USVL1VR-Ls)cmalsiB335
CmaCh17G006160Cucumber (Gy14) v2cgybcmaB758
CmaCh17G006160Silver-seed gourdcarcmaB0110
CmaCh17G006160Silver-seed gourdcarcmaB1063
CmaCh17G006160Cucumber (Chinese Long) v3cmacucB0446
CmaCh17G006160Watermelon (97103) v2cmawmbB372
CmaCh17G006160Cucurbita maxima (Rimu)cmacmaB389
CmaCh17G006160Cucurbita moschata (Rifu)cmacmoB380
CmaCh17G006160Wild cucumber (PI 183967)cmacpiB379
CmaCh17G006160Watermelon (Charleston Gray)cmawcgB324
CmaCh17G006160Watermelon (97103) v1cmawmB355