CmaCh17G005360 (gene) Cucurbita maxima (Rimu)

NameCmaCh17G005360
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu))
DescriptionRetrotransposon protein, putative, Ty3-gypsy subclass
LocationCma_Chr17 : 4087815 .. 4092496 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGGAAATGGAGGGGAGATCAATGAAGCTAGGTGGAGCGAAGCACAGGTTGGAACAATTTACTCGTTTGAATCAAGTTATTAGTACATTGACAGATCGGATGGAGCGAATTGAAATATCCTTAGGTAATCTTCAAGGGAGGGAAGTACCCTTGAATGAAGGAGTTGAAAATGAAGAAGATGGCAATGTCACCCTTTTAGCGGGACATAGTCTTAGGGGAGGGAGAGATGTCGGTCAAGGGAGAGGAAGAGTCAGAAGAAGGGGTAGAGAAATTTTAGCACCAAAAAGAATTGAGAGGGAGTACCAGTATGAGAGAGAAAAAGAAAAAGGAGTCGGGGGAGTAAAGCTAAAAATTCCAACTTTCTATGGGAAATCTGATCCAGAGGAGTATTTGCAATATAAGAGAAAAATTGAGCATGTCTTCGATTGCAACAATTTCAGTGAAGAAAGAAAGTTGAAGCTTGTTGTGGCTGAATTTTGTGATTATGCCATTATATGGTGGACGTCTTTAAAATCAGAGTGGAGGAGAAATTATGAAGAACCAATTGAAACGTGGGAGGAATTGAAGACATTAATGAGAAAAAGGTACATTCTTAAGCATTATTCTCAAGTACTCAAGCAAAAACTATATACTTTACAACAGGGATCCAAAAGTGTTGAAGAATATTATAAAGAAATGGAGACTCTTATGAATAGAGTATGTATTGATGAAGATGAGGAAGAGACAATGGCTAGATTTCTTGGTGGGTTAAACCGACAACTTGCTCATCAAGTGGATAGGCAAGCGTACTTTGATATGCAAGAATTTTTACACCTTGCTATCAAAATCGAAGGGCAACTAGCTTGGGAGAAGGAGAACTCCAAGATGTATGGTATTTCAAAGTCTACTACTTTCAACACTTGGAAAAATAATGCAAATATTGAAAAGATAGATTTCAAAGTTGGAGGCAAGTATGATCTTGACAAAAAGAACAAAGCTGAGACCTCCAAGGGTAAAGAGAAATCGGAGGAATATAAGGATATTCGAGAAAGAAATAGAGACATCAAATGTTGGAAATGTCAAGGAATTGGTTATCTTAGTCGTGATTGTCCTAACAAGAGAGTCATGATCATCAAGGATGGACAAGTTGTCACAGACAGTGAGAAAAGTGACCATGATGAGCTAGTTGAAGAGGAAATCCAGGAGCATGAGGAGGAACTAGAAGATGGGAGTCGTTTGGTACTTGTAACCAGAAGACTTCTTAAAACTCAAGTTACAAAGAATGATGTTGATGATCAAAGAGACAACCTATTTCACACAAGGTGTTTAGTTAAGGGGACTCCTTGTAGTCTTGTAATTGATAGTGGAAGCTGCACCAATGTCGTAAGTACAATGTTGATCAAAAGGTTGCTAATTCCAACCCAACACCATCCTAAACCTTACAATCTTCAATGGCTCAATGACAGTGGAACAATGAAGGTCACTTCTAGCTTTAATATCTTTTACTTTAAGAAAATATAAAGATGAAGTTCTTTGTGACGTTTTATCAATGCATGCTGGAGACATATTGCTTGGCCGACCATGGCAATTTGACAGGAGGGTTATGTATGATGGCTATTTGAATAGGTATTCTTTTGTAAAAGATGGTAGAAAAACCACTCTTGTGCCTTTGAGTTCTGCAAATGTATTTGCTGATCAATTAAAGTTGGAAGAAAAAAATAAAGAGTTTGAGGAAAAAGAGTTGAGTGAAAAAATAGAGAAAAGTCAACGAGAAAACCATAGTGAAAAAAATAATGAAATTGGAGAAAAAGGAAAGAATGTGAGTTGGAGAGGTTAGAAGGGCAATGTTCTCACAACAAAACCATCTTTGTACTTGTGTACAAGGAAGAATGTTTGGTCTCTAACGATAATAATTTGTCTTTGCCTAGTATGTTTCAATCTCTTTTACAGGAATTTGATGACGTATTCCAAGATGAAGTCCCTAAAGGACTACCTTCAATTAGAGGTATTGAACATAAAATAGACTTCATTCTAGGGGCGATAATTCCTAATAAGTCAGCTTATAGAGCCAACCCAACTGAGACTAAAGAAATTCGAAGGCAAGTAGAGGAGCTTATGGAGAAGAGCTATATACGAGAGAGTTTAAGTCCATGTTCTGTACCAATCTTATTGGTGCCGAAGAAAGATGGAACGTGGCGCATGTGCGTGGATTGTAGAGCCATCAACAAAATCACAGTAAAGTATCGACATCTTATTCCTATGCTAGACGATATGCTTGATGAATTGCATGGTTCATGTTTATTTACAACTTGAAATCTGGATATCATCAAATTATAATGCATGTAGGAGACAAATGGAAAACCGTGTTCAAAACTAAGTTTGGATTATATGAATGGCTTGTTATGCCTTTTGGGTTAACTAATGCTCCTAGTACATTTATGCGCTTAATGAATCATGTTTTGAGAGAATATTTAGGAAAGCATGTTGTTGTGTATTTTGATGATATTTTAATTTATTCAAAGACCTTGCATGAGCATGTGGAGCATGTTAAGTTAGTTTTGATTACACTTAGAAAAGAGAAACTTTATGCTAATTTTAATAAGTGTAGTTTTTGCATGGAAAAAGTTAACTTTCTTGGCTTCATAGTTGGTAAAAATGGAGTAGAAGTAGATGAAGAGAAAGTTAAAGCAATTAGGATTGGCCAACACCACAAAATGCAAGTGACGTTCGTAGTTTTCGTGGGTTAGCTAGCTTCTATAGGAGATTTATAAAAGATTTTAGCACCATAGCTACATCATTGAATGACTTGGTGAAAAAGAATGTTGTTTTTAAATGGGGAGATATGCAAGAGAATGCATTTAATGAGCTTAAGAATAAATTAACCAATGCACCATTACTTGTCTTGCCTAACTTTGATAAAACTTTTGAAATTGAGTGTGATGCAAGTGGTTTGGGAATAGGTGCTGTTTTGATGCAAGATGGCAAACCCGTAATGTATTTTAGTGAAAAACTAAATGGGGCAGCATTGAACTATCCTACCTATGATAAAGAATTGTTTGCTTTAGTTCGCACATTGCATGTGTGGCAACACTACTTATGGCCTAGAGAATTTGTGATCCACTCTGATCATGAAAGCTTGAAGTATCTTAAGGGTTAAAGCAAACTGAACTGTAGGCATGCAAAGTGGGTGGAGTTTATTGAAACATTTTCGTATGTCATCAAATATAAGCAAGGTAAGGATAATGTGGTAGTTGATGCATTATCTAGAAAGTACAATTTTTTTTCTTCACTCAGTGTAAAAATTCTTAGATTTGAGCATATTAAAGAATTATATTGAGATGACCACGACTTTGGAATTATTTATGCATCTTGTCTTACAAAAACAGCTGTAGATGATTATTATGTGTTTCATGAATTCTTATTTAAGAAAAGTAAGCTTTGTATTCCTAAATGCTCTATCCGAGATTTGCTTGTTAAAGAAGCACATAATGGTGGCTTAATGGGACATTTTGAGATTAATAAAACTTATTATATGTTGCATGAACACTTCTTTTGGCCGAAAATGAAGCATGATGTTCATAAATTTTGTAGTCAATGCTTTAAATGCAAAGAAGCTAAATCTAGGTCACAACCAAATGGATTGTACACTACTTTGAATGTACCTAATGAACCTTGGACTAATATATCTATGGATTTTGTTCTTGGTTTACCGCGCACTAAAAAGGGTAAAGATAGTATTTTTGTTGTGGTAGACATATTTAGTAAGATGGCTCATTTTATTACATGTAACAAGACGAACGATGCAAAACATGTTGCTGACTTATTTTTTAGGGAAGTAGTAAGATTACATGGAATCCCTAGAATAATTGTTAGTGATAGGGATGCTAAATTTCTAAGTCACTTTTGAAAAGTATTGTGGGGTAATTGGGTATCAAATTGTTGTTTTCAACTACATGTCATCCTCAGACGGATGGACAAACTGAGGTGGTTAATAGAACATTAGGAGCATTGCTTAGGACTATTATTTCTAAGAATATTAAGTCTTGGGATGAATGTTTGCCATTTGTAGAGTTTGCATATAATAGAGCAATTCATAAAACAACTCATTGTTCTTCTTTTGAAGTTAGTTTATGGATTTAATCCACTTACGCCTCTTGATTTGCTTCATATTTCTTCTAATATGTTTGTGAGTGGACGCAGCAACAAGTAAGGTAGACTTGATCAAAACATTGCACAAGGAGGTGAAGGAGAGAATTGAGACCCAAAATTTCAAAGTTGCTTCTAGGATTAACAAAGGACGGAAGGAAATCATTTTTAAACCTGGTGACTGGGTTTGGATACATTTTCGCAAGGAGCGATTCCCATCTCAACGGAAGACAAAGTTACATCCAAGAGGGGATGGCCCTTATCAAGTTCTTGAAAGAATTAATAACATTGCATATAAAATTGATCTTCCCAGAGACTTTTGAGTACATTCTACTTTCAATGTTGCTGACTTAAGTCCTTTTGATGTAGGTGATGATTTTTCTGATTCGAGGACGAATCCTTTTGAAGAGGGGGAAGATGATAAGAATCACGGTGTTCCAAATGGACCTATTACACGATCCAAGGCAAAGAAGATTCAACAAACATTCGTTCATTCTTCATCTACAAAATTGGATCGGCTCGGTTCAACCATCATTTGTAGAATTAGAAGCTGA

mRNA sequence

ATGGAGGAAATGGAGGGGAGATCAATGAAGCTAGGTGGAGCGAAGCACAGGTTGGAACAATTTACTCGTTTGAATCAAGTTATTAGTACATTGACAGATCGGATGGAGCGAATTGAAATATCCTTAGGTAATCTTCAAGGGAGGGAAGTACCCTTGAATGAAGGAGTTGAAAATGAAGAAGATGGCAATGTCACCCTTTTAGCGGGACATAGTCTTAGGGGAGGGAGAGATGTCGGTCAAGGGAGAGGAAGAGTCAGAAGAAGGGGTAGAGAAATTTTAGCACCAAAAAGAATTGAGAGGGAGTACCAGTATGAGAGAGAAAAAGAAAAAGGAGTCGGGGGAGTAAAGCTAAAAATTCCAACTTTCTATGGGAAATCTGATCCAGAGGAGTATTTGCAATATAAGAGAAAAATTGAGCATGTCTTCGATTGCAACAATTTCAGTGAAGAAAGAAAGTTGAAGCTTGTTGTGGCTGAATTTTGTGATTATGCCATTATATGGTGGACGTCTTTAAAATCAGAGTGGAGGAGAAATTATGAAGAACCAATTGAAACGTGGGAGGAATTGAAGACATTAATGAGAAAAAGGTACATTCTTAAGCATTATTCTCAAGTACTCAAGCAAAAACTATATACTTTACAACAGGGATCCAAAAGTGTTGAAGAATATTATAAAGAAATGGAGACTCTTATGAATAGAGTATGTATTGATGAAGATGAGGAAGAGACAATGGCTAGATTTCTTGGTGGGTTAAACCGACAACTTGCTCATCAAGTGGATAGGCAAGCGTACTTTGATATGCAAGAATTTTTACACCTTGCTATCAAAATCGAAGGGCAACTAGCTTGGGAGAAGGAGAACTCCAAGATGTATGGTATTTCAAAGTCTACTACTTTCAACACTTGGAAAAATAATGCAAATATTGAAAAGATAGATTTCAAAGTTGGAGGCAAGTATGATCTTGACAAAAAGAACAAAGCTGAGACCTCCAAGGGTAAAGAGAAATCGGAGGAATATAAGGATATTCGAGAAAGAAATAGAGACATCAAATGTTGGAAATGTCAAGGAATTGGTTATCTTAGTCGTGATTGTCCTAACAAGAGAGTCATGATCATCAAGGATGGACAAGTTGTCACAGACAGTGAGAAAAGTGACCATGATGAGCTAGTTGAAGAGGAAATCCAGGAGCATGAGGAGGAACTAGAAGATGGGAGTCGTTTGGTACTTGTAACCAGAAGACTTCTTAAAACTCAAGTTACAAAGAATGATGTTGATGATCAAAGAGACAACCTATTTCACACAAGGTGTTTAGTTAAGGGGACTCCTTGTAGTCTTGTAATTGATAGTGGAAGCTGCACCAATGTCGTAAGTACAATGTTGATCAAAAGGTTGCTAATTCCAACCCAACACCATCCTAAACCTTACAATCTTCAATGGCTCAATGACAGTGGAACAATGAAGGAATTTGATGACGTATTCCAAGATGAAGTCCCTAAAGGACTACCTTCAATTAGAGGTGATGATTTTTCTGATTCGAGGACGAATCCTTTTGAAGAGGGGGAAGATGATAAGAATCACGGTGTTCCAAATGGACCTATTACACGATCCAAGGCAAAGAAGATTCAACAAACATTCGTTCATTCTTCATCTACAAAATTGGATCGGCTCGGTTCAACCATCATTTGTAGAATTAGAAGCTGA

Coding sequence (CDS)

ATGGAGGAAATGGAGGGGAGATCAATGAAGCTAGGTGGAGCGAAGCACAGGTTGGAACAATTTACTCGTTTGAATCAAGTTATTAGTACATTGACAGATCGGATGGAGCGAATTGAAATATCCTTAGGTAATCTTCAAGGGAGGGAAGTACCCTTGAATGAAGGAGTTGAAAATGAAGAAGATGGCAATGTCACCCTTTTAGCGGGACATAGTCTTAGGGGAGGGAGAGATGTCGGTCAAGGGAGAGGAAGAGTCAGAAGAAGGGGTAGAGAAATTTTAGCACCAAAAAGAATTGAGAGGGAGTACCAGTATGAGAGAGAAAAAGAAAAAGGAGTCGGGGGAGTAAAGCTAAAAATTCCAACTTTCTATGGGAAATCTGATCCAGAGGAGTATTTGCAATATAAGAGAAAAATTGAGCATGTCTTCGATTGCAACAATTTCAGTGAAGAAAGAAAGTTGAAGCTTGTTGTGGCTGAATTTTGTGATTATGCCATTATATGGTGGACGTCTTTAAAATCAGAGTGGAGGAGAAATTATGAAGAACCAATTGAAACGTGGGAGGAATTGAAGACATTAATGAGAAAAAGGTACATTCTTAAGCATTATTCTCAAGTACTCAAGCAAAAACTATATACTTTACAACAGGGATCCAAAAGTGTTGAAGAATATTATAAAGAAATGGAGACTCTTATGAATAGAGTATGTATTGATGAAGATGAGGAAGAGACAATGGCTAGATTTCTTGGTGGGTTAAACCGACAACTTGCTCATCAAGTGGATAGGCAAGCGTACTTTGATATGCAAGAATTTTTACACCTTGCTATCAAAATCGAAGGGCAACTAGCTTGGGAGAAGGAGAACTCCAAGATGTATGGTATTTCAAAGTCTACTACTTTCAACACTTGGAAAAATAATGCAAATATTGAAAAGATAGATTTCAAAGTTGGAGGCAAGTATGATCTTGACAAAAAGAACAAAGCTGAGACCTCCAAGGGTAAAGAGAAATCGGAGGAATATAAGGATATTCGAGAAAGAAATAGAGACATCAAATGTTGGAAATGTCAAGGAATTGGTTATCTTAGTCGTGATTGTCCTAACAAGAGAGTCATGATCATCAAGGATGGACAAGTTGTCACAGACAGTGAGAAAAGTGACCATGATGAGCTAGTTGAAGAGGAAATCCAGGAGCATGAGGAGGAACTAGAAGATGGGAGTCGTTTGGTACTTGTAACCAGAAGACTTCTTAAAACTCAAGTTACAAAGAATGATGTTGATGATCAAAGAGACAACCTATTTCACACAAGGTGTTTAGTTAAGGGGACTCCTTGTAGTCTTGTAATTGATAGTGGAAGCTGCACCAATGTCGTAAGTACAATGTTGATCAAAAGGTTGCTAATTCCAACCCAACACCATCCTAAACCTTACAATCTTCAATGGCTCAATGACAGTGGAACAATGAAGGAATTTGATGACGTATTCCAAGATGAAGTCCCTAAAGGACTACCTTCAATTAGAGGTGATGATTTTTCTGATTCGAGGACGAATCCTTTTGAAGAGGGGGAAGATGATAAGAATCACGGTGTTCCAAATGGACCTATTACACGATCCAAGGCAAAGAAGATTCAACAAACATTCGTTCATTCTTCATCTACAAAATTGGATCGGCTCGGTTCAACCATCATTTGTAGAATTAGAAGCTGA

Protein sequence

MEEMEGRSMKLGGAKHRLEQFTRLNQVISTLTDRMERIEISLGNLQGREVPLNEGVENEEDGNVTLLAGHSLRGGRDVGQGRGRVRRRGREILAPKRIEREYQYEREKEKGVGGVKLKIPTFYGKSDPEEYLQYKRKIEHVFDCNNFSEERKLKLVVAEFCDYAIIWWTSLKSEWRRNYEEPIETWEELKTLMRKRYILKHYSQVLKQKLYTLQQGSKSVEEYYKEMETLMNRVCIDEDEEETMARFLGGLNRQLAHQVDRQAYFDMQEFLHLAIKIEGQLAWEKENSKMYGISKSTTFNTWKNNANIEKIDFKVGGKYDLDKKNKAETSKGKEKSEEYKDIRERNRDIKCWKCQGIGYLSRDCPNKRVMIIKDGQVVTDSEKSDHDELVEEEIQEHEEELEDGSRLVLVTRRLLKTQVTKNDVDDQRDNLFHTRCLVKGTPCSLVIDSGSCTNVVSTMLIKRLLIPTQHHPKPYNLQWLNDSGTMKEFDDVFQDEVPKGLPSIRGDDFSDSRTNPFEEGEDDKNHGVPNGPITRSKAKKIQQTFVHSSSTKLDRLGSTIICRIRS
BLAST of CmaCh17G005360 vs. TrEMBL
Match: E7BQD7_PEA (Mutant gag-pol polyprotein OS=Pisum sativum PE=4 SV=1)

HSP 1 Score: 308.9 bits (790), Expect = 1.3e-80
Identity = 166/390 (42.56%), Postives = 240/390 (61.54%), Query Frame = 1

Query: 99  EREYQYEREKEKGVGGVKLKIPTFYGKSDPEEYLQYKRKIEHVFDCNNFSEERKLKLVVA 158
           E   +  R++   + G+K+K+PTF GKSDPE YL+++ K+E +F+C+N+S   K+++   
Sbjct: 56  EERRRRRRQRGDNLRGIKIKVPTFVGKSDPEAYLEWETKLEQIFNCHNYSNLEKVQVASI 115

Query: 159 EFCDYAIIWWTSLKSEWRRNYEEPIETWEELKTLMRKRYILKHYSQVLKQKLYTLQQGSK 218
           EF +YA++WW  L  + RR  E PI+TWEE+K +MR+R++  +Y + L  KL  L QGSK
Sbjct: 116 EFKEYALVWWDQLIKDRRRYAERPIDTWEEMKRIMRRRFVPSYYHRELHNKLRRLTQGSK 175

Query: 219 SVEEYYKEMETLMNRVCIDEDEEETMARFLGGLNRQLAHQVDRQAYFDMQEFLHLAIKIE 278
           SVEEY+KEME L  R  ++ED+E TMARFL GLN  ++  V+   Y +M E +H AIK+E
Sbjct: 176 SVEEYFKEMEVLKIRANVEEDDEATMARFLHGLNHDISDIVELHHYVEMDELVHQAIKVE 235

Query: 279 GQLAWEKENSKMYGISKSTTFN--TWKNNANIEKIDFKVGGKYDLDKKNKAETSKGKEKS 338
            QL       K      STTFN  +WK+    E              K     +KGK  +
Sbjct: 236 QQL-----KRKSQARRNSTTFNSQSWKDKTKKEGAS---------SSKEATVENKGKTIT 295

Query: 339 EEYKDIRERNRDIKCWKCQGIGYLSRDCPNKRVMIIKDGQVVTDSEKSDHDELVEEEIQE 398
                +   N+ +KC+KCQG G+++  CP KR M++++ + + + E  D+DE       E
Sbjct: 296 SSSSSV-STNKSVKCFKCQGQGHIASQCPTKRTMLMEENEGIVEEEDGDYDE-------E 355

Query: 399 HEEELEDGSRLVLVTRRLLKTQVTKNDVDDQRDNLFHTRCLVKGTPCSLVIDSGSCTNVV 458
            EEE+  G   +L+ RR+L +Q+ + D   QR+NLFHTRC V+G  CSL+ID GSCTNV 
Sbjct: 356 FEEEIPSGD--LLMVRRMLGSQIKEEDT-GQRENLFHTRCFVQGKVCSLIIDGGSCTNVA 415

Query: 459 STMLIKRLLIPTQHHPKPYNLQWLNDSGTM 487
           ST L+ +L + T+ HPKPY LQWLN+S  M
Sbjct: 416 STRLVSKLKLETKPHPKPYKLQWLNESVEM 420

BLAST of CmaCh17G005360 vs. TrEMBL
Match: A5AG41_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_037350 PE=4 SV=1)

HSP 1 Score: 308.1 bits (788), Expect = 2.2e-80
Identity = 178/432 (41.20%), Postives = 259/432 (59.95%), Query Frame = 1

Query: 86  RRRGREILAPKRIE-REYQYEREKE--------KGVGGVKLKIPTFYGKSDPEEYLQYKR 145
           RR+GR +      +  E ++E E +        + +G +K+KIP+F GK+DPE YL++++
Sbjct: 23  RRQGRRVHVDDSNDYHEDEFEDEDDQASLNHDGRNLGNIKMKIPSFQGKNDPEVYLEWEK 82

Query: 146 KIEHVFDCNNFSEERKLKLVVAEFCDYAIIWWTSLKSEWRRNYEEPIETWEELKTLMRKR 205
           K+E +F+C+N+SEE+ +KLVV EF D AIIWW  L    RRNYE  IETWEE+K  MR+R
Sbjct: 83  KVEFIFECHNYSEEKNVKLVVIEFTDCAIIWWDQLVMNRRRNYERLIETWEEMKATMRRR 142

Query: 206 YILKHYSQVLKQKLYTLQQGSKSVEEYYKEMETLMNRVCIDEDEEETMARFLGGLNRQLA 265
                                 +V++Y+KEME  M R  ++ED E TMARFL GLNR +A
Sbjct: 143 ----------------------NVDDYHKEMEIAMIRANVEEDRETTMARFLNGLNRDIA 202

Query: 266 HQVDRQAYFDMQEFLHLAIKIEGQLAWEKENSKMYGISKSTTFNTWKNNANIEKIDFKVG 325
           + V+ Q Y +++  +H+AIK+E QL   K    +   +  ++ +   N    E + FK  
Sbjct: 203 NVVELQHYVELENMVHMAIKVERQL---KRKGTLSFQNPGSSASWRPNGRKDEGVVFKSK 262

Query: 326 GKYDLDKKNKAETSKGKEKSEEYKDIRERNRDIKCWKCQGIGYLSRDCPNKRVMIIK-DG 385
            K    +      +KGK +S+       RN DIKC+   G+G+++  CPNKR MI   DG
Sbjct: 263 TKPPKRRDEAPNVNKGKNESQ------TRNHDIKCFHYLGVGHIASQCPNKRTMIAHVDG 322

Query: 386 QVVTDSEKSDHDEL--VEEEIQEHEEELEDGSRLVLVTRRLLKTQVTKNDVDDQRDNLFH 445
           +V T+SE+ D D++  +E+   ++ E   +G    LV RR L  QV K+D++ QR+N+FH
Sbjct: 323 EVETESEEDD-DQMPSLEDSCDDNVEYPVEGES--LVARRALSAQVKKDDMEQQRENIFH 382

Query: 446 TRCLVKGTPCSLVIDSGSCTNVVSTMLIKRLLIPTQHHPKPYNLQWLNDSGTMKEFDDVF 505
           TRC +    CS++ID GSC NV ST L+++L +PT  HP+PY LQWLND G +KE+ DVF
Sbjct: 383 TRCHINNKVCSMIIDGGSCANVASTTLVEKLNLPTLKHPRPYKLQWLNDCGEVKEYKDVF 420

BLAST of CmaCh17G005360 vs. TrEMBL
Match: E7BQD6_PEA (Mutant gag-pol polyprotein OS=Pisum sativum PE=4 SV=1)

HSP 1 Score: 304.3 bits (778), Expect = 3.1e-79
Identity = 164/390 (42.05%), Postives = 237/390 (60.77%), Query Frame = 1

Query: 99  EREYQYEREKEKGVGGVKLKIPTFYGKSDPEEYLQYKRKIEHVFDCNNFSEERKLKLVVA 158
           E   +  R+    + G+K+K+PTF GKSDPE YL+++ K+E +F+C+N+S   K+++   
Sbjct: 56  EERRRRRRQGGDNLRGIKIKVPTFVGKSDPEAYLEWETKLEQIFNCHNYSNLEKVQVASI 115

Query: 159 EFCDYAIIWWTSLKSEWRRNYEEPIETWEELKTLMRKRYILKHYSQVLKQKLYTLQQGSK 218
           EF +YA++WW  L  + RR  E PI+TWEE+K +MR+R++  +Y + L  KL  L QGSK
Sbjct: 116 EFKEYALVWWDQLTKDRRRYAERPIDTWEEMKRIMRRRFVPSYYHRELHNKLQRLTQGSK 175

Query: 219 SVEEYYKEMETLMNRVCIDEDEEETMARFLGGLNRQLAHQVDRQAYFDMQEFLHLAIKIE 278
           SVEEY+KEME L  R  ++ED+E TMARFL GLN  ++  V+   Y +M E +H AIK+E
Sbjct: 176 SVEEYFKEMEVLKIRANVEEDDEATMARFLHGLNHDISDIVELHHYVEMDELVHQAIKVE 235

Query: 279 GQLAWEKENSKMYGISKSTTFN--TWKNNANIEKIDFKVGGKYDLDKKNKAETSKGKEKS 338
            QL       K      STTFN  +WK+    E              K     +KGK  +
Sbjct: 236 QQL-----KRKSQARRNSTTFNSQSWKDKTKKEGAS---------SSKEATVENKGKTIT 295

Query: 339 EEYKDIRERNRDIKCWKCQGIGYLSRDCPNKRVMIIKDGQVVTDSEKSDHDELVEEEIQE 398
                +   N+ +KC+KCQG G+++  CP KR M++++ + + + E  D+D       +E
Sbjct: 296 SSSSSV-STNKSVKCFKCQGQGHIASQCPTKRTMLMEENEEIVEEEDGDYD-------KE 355

Query: 399 HEEELEDGSRLVLVTRRLLKTQVTKNDVDDQRDNLFHTRCLVKGTPCSLVIDSGSCTNVV 458
             EE+  G   +L+ RR+L +Q+ + D   QR+NLFH RC V+G  CSL+ID GSCTNV 
Sbjct: 356 FGEEIPSGD--LLMVRRMLGSQIKEEDT-SQRENLFHIRCFVQGKVCSLIIDGGSCTNVA 415

Query: 459 STMLIKRLLIPTQHHPKPYNLQWLNDSGTM 487
           ST L+ RL + T+ HPKPY LQWLN+S  M
Sbjct: 416 STRLVSRLKLETKPHPKPYKLQWLNESVEM 420

BLAST of CmaCh17G005360 vs. TrEMBL
Match: A0A151RW41_CAJCA (Uncharacterized protein OS=Cajanus cajan GN=KK1_031655 PE=4 SV=1)

HSP 1 Score: 293.1 bits (749), Expect = 7.2e-76
Identity = 165/395 (41.77%), Postives = 245/395 (62.03%), Query Frame = 1

Query: 97  RIEREYQYEREKEKGVG------------GVKLKIPTFYGKSDPEEYLQYKRKIEHVFDC 156
           RIER   YE  +E+  G            GVKL +P F GKSDPE Y++++ KIEH+F C
Sbjct: 36  RIERLENYEHHEEERRGRNGGAPRQNRIEGVKLNVPPFKGKSDPEAYVEWELKIEHIFTC 95

Query: 157 NNFSEERKLKLVVAEFCDYAIIWWTSLKSEWRRNYEEPIETWEELKTLMRKRYILKHYSQ 216
           NN+ EE+K+KL  AEF DYA++WW  LK E  RN E  +ETW E+K LMRKRY+   Y +
Sbjct: 96  NNYDEEQKVKLAAAEFSDYALVWWNKLKRERLRNEEPLVETWAEMKRLMRKRYVPASYVR 155

Query: 217 VLKQKLYTLQQGSKSVEEYYKEMETLMNRVCIDEDEEETMARFLGGLNRQLAHQVDRQAY 276
            +K KL  L QG+K VEEY+KE++ LM +  I+ED E TMARF+ GLN  +   V+ Q +
Sbjct: 156 DVKFKLQKLSQGTKRVEEYFKELDLLMMQANIEEDPELTMARFINGLNNDICDVVELQEF 215

Query: 277 FDMQEFLHLAIKIEGQLAWEKENSKMYGISKSTTFNTWKNNANIEKIDFKVGGKYD--LD 336
            ++++ LH +I++E QL       K   ++K       K+++N     +K   K +  + 
Sbjct: 216 VEIEDLLHKSIQVEQQL-------KRKSVTK-------KSSSNYNSFSWKDKNKKEVAVT 275

Query: 337 KKNKAETSKGKEKSEEYKDIRERNRDIKCWKCQGIGYLSRDCPNKRVMIIKDGQVVTDSE 396
             N A TS GK  S+  +  +++++DIKC+KCQG+G+ + +CP KR M++K+    T   
Sbjct: 276 LSNPASTSHGKSSSKTLEQPQKKSKDIKCFKCQGMGHYAYECPTKRTMVLKENGDYT--S 335

Query: 397 KSDHDELVEEEIQEHEEELEDGSRLVLVTRRLLKTQVTKNDVDDQRDNLFHTRCLVKGTP 456
           +SD  E  E +I+E EE LE     +L+ RR++ +Q++  ++  QR+N+FHTRC + G  
Sbjct: 336 QSDVSEEEEGDIEEEEEALEGD---LLMIRRMMGSQMSPLEI-SQRENIFHTRCSINGKV 395

Query: 457 CSLVIDSGSCTNVVSTMLIKRLLIPTQHHPKPYNL 478
           C ++ID GSCTNV S  L+ +L + T+ HP+PY L
Sbjct: 396 CMVIIDRGSCTNVASARLVSKLNLDTKPHPRPYKL 410

BLAST of CmaCh17G005360 vs. TrEMBL
Match: A5AY05_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_009305 PE=4 SV=1)

HSP 1 Score: 287.3 bits (734), Expect = 3.9e-74
Identity = 180/455 (39.56%), Postives = 272/455 (59.78%), Query Frame = 1

Query: 19  EQFTRLNQVISTLTDRMERIEISLGNLQGREVPLNEG-------VENEEDGNVTLLAGHS 78
           +QF R+N V + + DRM+R   +    QG+   +++         E+EED        H 
Sbjct: 3   QQFERMNVVFNDIWDRMDRALNA--RKQGKRAHVDDSDDYHDDEFEDEED---QASLNHE 62

Query: 79  LRGGRDVGQGRGRVRRRGREILAPKRIEREYQYEREKEKGVGGVKLKIPTFYGKSDPEEY 138
            R G  +G  RGR  R     +AP+       ++    + +G +K+KIP+F GK+DP+ Y
Sbjct: 63  GRFG-PMGDRRGRGFR-----IAPR-------WQDGTTRNLGNIKMKIPSFQGKNDPKVY 122

Query: 139 LQYKRKIEHVFDCNNFSEERKLKLVVAEFCDYAIIWWTSLKSEWRRNYEEPIETWEELKT 198
           L++++K+E +F+C+N+SEE+ +KL V EF DYAIIWW  L    RRNYE PIETWEE+K 
Sbjct: 123 LEWEKKVEFIFECHNYSEEKIVKLPVIEFTDYAIIWWDQLVMNRRRNYERPIETWEEMKA 182

Query: 199 LMRKRYILKHYSQVLKQKLYTLQQGSKSVEEYYKEMETLMNRVCIDEDEEETMARFLGGL 258
            MR+R++L HY + L QKL +L QG +SV++Y+KEME  M RV ++ED E TMARFL  +
Sbjct: 183 TMRRRFVLSHYYRDLYQKLKSLTQGYRSVDDYHKEMEIAMIRVNVEEDREATMARFLNMM 242

Query: 259 NRQLAHQVDRQAYFDMQEFLHLAIKIEGQLAWEKENSKMYGISKSTTFNTWK-NNANIEK 318
           NR +A+ V  Q Y ++++ L    K +G  +++   S          F +W+ N    E 
Sbjct: 243 NRDIANVVKLQHYVELEDML----KRKGTRSFQNPGS----------FASWRPNGRKDEG 302

Query: 319 IDFKVGGKYDLDKKNKAETSKGKEKSEEYKDIRERNRDIKCWKCQGIGYLSRDCPNKRVM 378
           I FK   K    +      +KGK +S+       RNRDIKC++C G+G+++  CPNKR+M
Sbjct: 303 IVFKSKTKPPKRRDEAPNVNKGKNESQ------TRNRDIKCFRCLGVGHIASQCPNKRIM 362

Query: 379 IIK-DGQVVTDSEKSDH-DELVEEEIQEHEEELEDGSRLVLVTRRLLKTQVTKNDVDDQR 438
           I + DG+V  +SE+ D     +E+   ++ E L +G    LV R  L +QV ++D++ QR
Sbjct: 363 IARVDGEVEIESEEDDDLMPSLEDACDDNVEYLVEGES--LVARLALSSQVKEDDMEQQR 417

Query: 439 DNLFHTRCLVKGTPCSLVIDSGSCTNVVSTMLIKR 464
           +N+FHTRC +    CS++ID GSCTNV ST L+++
Sbjct: 423 ENIFHTRCHINNKVCSMIIDGGSCTNVASTTLVEK 417

BLAST of CmaCh17G005360 vs. NCBI nr
Match: gi|823137916|ref|XP_012468777.1| (PREDICTED: uncharacterized protein LOC105786844 [Gossypium raimondii])

HSP 1 Score: 335.9 bits (860), Expect = 1.4e-88
Identity = 188/427 (44.03%), Postives = 266/427 (62.30%), Query Frame = 1

Query: 82  RGRVRRRGREILAPKRIEREYQYEREKEKGVGGVKLKIPTFYGKSDPEEYLQYKRKIEHV 141
           R   RRRG  +       RE +     +  +  +K+ IP F G+SDPE YL++++K+E V
Sbjct: 41  RQSARRRGHRV-------REQRDRERPDDDLKNIKMTIPAFQGRSDPEAYLEWEKKVELV 100

Query: 142 FDCNNFSEERKLKLVVAEFCDYAIIWWTSLKSEWRRNYEEPIETWEELKTLMRKRYILKH 201
           F+C+N+SE +K+KL   EF DYAIIWW  L    RRN E P+ TW E+K +MRKR+IL +
Sbjct: 101 FECHNYSESKKVKLATIEFSDYAIIWWDQLSLSRRRNGERPVSTWAEMKAIMRKRFILAY 160

Query: 202 YSQVLKQKLYTLQQGSKSVEEYYKEMETLMNRVCIDEDEEETMARFLGGLNRQLAHQVDR 261
           Y + L QKL +L QG +SVE+YYKEME  M R  ++ED E TMARFL GLNR++A+ V+ 
Sbjct: 161 YHRELYQKLQSLTQGQRSVEDYYKEMEVAMIRADVEEDREATMARFLAGLNREIANIVEL 220

Query: 262 QAYFDMQEFLHLAIKIEGQLAWEKENSKMYGISKSTTFNTWKNNANIEKIDFKVGGKYDL 321
             Y ++ + +H+AIK+E QL  +  +      S  T +    N  ++   + +V G    
Sbjct: 221 HHYVEVIDMVHMAIKVEKQLKRKGTSRSFPNTSSMTRWGQGTNKRDMPSRNKEVSGATKF 280

Query: 322 DKKNKAETSKGKEKSEEYKDIRERNRDIKCWKCQGIGYLSRDCPNKRVMII-KDGQVVTD 381
           +K   AE+SKGK  ++       R+RDIKC+KC G G+++  C N+  M I  DG++  +
Sbjct: 281 NKPI-AESSKGKMDAQP-----NRSRDIKCFKCLGRGHIASQCLNRNAMFIWDDGKI--E 340

Query: 382 SEKSDHDELVEEEIQEHE-EELEDGSRLVLVTRRLLKTQVTKNDVDDQRDNLFHTRCLVK 441
           SE     E VE   +E E E+ E+G   +LV +R L  Q  +ND   QR+N+FHTRC V 
Sbjct: 341 SEGEQEQEAVEPNKEEEEVEQAENGE--ILVVKRSLTLQGAEND--QQRENIFHTRCQVN 400

Query: 442 GTPCSLVIDSGSCTNVVSTMLIKRLLIPTQHHPKPYNLQWLNDSGTMKEFDDVFQDEVPK 501
           G  C ++ID GSCTNV ST+++++L + T  HP PY LQWLND G +KEF DVF +++P 
Sbjct: 401 GKICCVIIDVGSCTNVASTLMVEKLGLVTTKHPHPYKLQWLNDGGELKEFQDVFPEQIPS 448

Query: 502 GLPSIRG 507
           GLP IRG
Sbjct: 461 GLPPIRG 448

BLAST of CmaCh17G005360 vs. NCBI nr
Match: gi|823218652|ref|XP_012442007.1| (PREDICTED: uncharacterized protein LOC105767023 [Gossypium raimondii])

HSP 1 Score: 328.6 bits (841), Expect = 2.2e-86
Identity = 176/391 (45.01%), Postives = 250/391 (63.94%), Query Frame = 1

Query: 117 LKIPTFYGKSDPEEYLQYKRKIEHVFDCNNFSEERKLKLVVAEFCDYAIIWWTSLKSEWR 176
           + IP F G+SDPE YL++++K+E VF+C+N+SE +K+KL   EF +YAIIWW  L    R
Sbjct: 1   MAIPAFQGRSDPEAYLEWEKKVELVFECHNYSESKKVKLAAIEFSNYAIIWWDQLTMSRR 60

Query: 177 RNYEEPIETWEELKTLMRKRYILKHYSQVLKQKLYTLQQGSKSVEEYYKEMETLMNRVCI 236
           RN E P+ TW E+K +MRK++I  +Y + L QKL +L QG +SVE+YYKEME  M R  +
Sbjct: 61  RNGERPVSTWAEMKAIMRKQFIPAYYHRELYQKLQSLTQGQRSVEDYYKEMEVAMIRADV 120

Query: 237 DEDEEETMARFLGGLNRQLAHQVDRQAYFDMQEFLHLAIKIEGQLAWEKENSKMYGISKS 296
           +ED E TMARFL GLNR++A+ V+   Y ++ + +H+AIK+E QL  +  +      S  
Sbjct: 121 EEDREATMARFLAGLNREIANIVELHHYVEVIDMVHMAIKVEKQLKRKGTSRSFPNTSSL 180

Query: 297 TTFNTWKNNANIEKIDFKVGGKYDLDKKNKAETSKGKEKSEEYKDIRERNRDIKCWKCQG 356
           T +    N  ++   + +V G    +K   AE+SKGK  ++       R+RDIKC+KC G
Sbjct: 181 TRWGQGTNKRDMPSRNKEVSGATKFNKPI-AESSKGKMDAQP-----NRSRDIKCFKCLG 240

Query: 357 IGYLSRDCPNKRVMIIKDGQVVTDSEKSDHDELVEE-EIQEHEEELEDGSRLVLVTRRLL 416
            G++   CPN+  M I+D          D +E VE+ E +E  E+ E+G   +LV +R L
Sbjct: 241 RGHIKSQCPNRNAMFIRD----------DENEAVEQLEEEEDIEQAENGE--ILVVKRSL 300

Query: 417 KTQVTKNDVDDQRDNLFHTRCLVKGTPCSLVIDSGSCTNVVSTMLIKRLLIPTQHHPKPY 476
             Q  +ND   QR+N+FHTRC V+G  C ++ID GSCTNV ST+++++L + T  HP PY
Sbjct: 301 TLQGVEND--QQRENIFHTRCQVQGNICCVIIDGGSCTNVASTLMVEKLGLATTKHPHPY 360

Query: 477 NLQWLNDSGTMKEFDDVFQDEVPKGLPSIRG 507
            LQWLND G +KEF DVF +E+P GLP I G
Sbjct: 361 KLQWLNDGGELKEFQDVFPEEIPSGLPPISG 371

BLAST of CmaCh17G005360 vs. NCBI nr
Match: gi|923695253|ref|XP_013657889.1| (PREDICTED: uncharacterized protein LOC106362554 [Brassica napus])

HSP 1 Score: 322.8 bits (826), Expect = 1.2e-84
Identity = 177/393 (45.04%), Postives = 256/393 (65.14%), Query Frame = 1

Query: 96  KRIEREYQYEREKEKGVGGVKLKIPTFYGKSDPEEYLQYKRKIEHVFDCNNFSEERKLKL 155
           +R  R+++  R +   + G+KLKIP F+GK+DP+ YL++++KIE VF+C ++SE +K+++
Sbjct: 93  RRSRRDHEGRRHRRNELSGLKLKIPPFHGKADPDAYLEWEKKIELVFNCQHYSETKKIQV 152

Query: 156 VVAEFCDYAIIWWTSLKSEWRRNYEEPIETWEELKTLMRKRYILKHYSQVLKQKLYTLQQ 215
              EF DYA+ WW  L +  RRN E PIETW E+K +MR+R++  HY + L QKL  L Q
Sbjct: 153 AATEFNDYALSWWDQLVTNKRRNGEFPIETWAEMKAVMRRRFVPSHYHRDLHQKLRLLTQ 212

Query: 216 GSKSVEEYYKEMETLMNRVCIDEDEEETMARFLGGLNRQLAHQVDRQAYFDMQEFLHLAI 275
           GSKSVEEY++EME LM R C+ ED E TMARFLGGLNR++  +V+ Q Y +++E LH AI
Sbjct: 213 GSKSVEEYFQEMELLMLRACVSEDSEATMARFLGGLNREIQDRVEMQHYLEIEEMLHKAI 272

Query: 276 KIEGQLAWEKENSKMYGISKSTTFNTWKNNANIEKIDFKVGGKYDLDKKNKAETSKGKEK 335
            +E Q+   K  S   G   S  + T K     +K  ++   K    +++K+ +   K+K
Sbjct: 273 LVEQQV---KRRSHARGSYGSNRYQTSKE----DKPSYQKESKPQPKEESKSSSIYNKDK 332

Query: 336 SEEYKDIRERNRDIKCWKCQGIGYLSRDCPNKRVMI-IKDGQVVTDSEKSDHDELVEEEI 395
             + +    R RD+KC+KCQG G+ + +C NKRVMI +++G+  ++ EK   D+ + E  
Sbjct: 333 G-KVEATSSRARDVKCFKCQGRGHYANECTNKRVMILLENGEFESEDEKLRTDQELSE-- 392

Query: 396 QEHEEELEDGSRLVLVTRRLLKTQVTKNDVDDQRDNLFHTRCLVKGTPCSLVIDSGSCTN 455
            EHEEE   G   +LV RR L  Q  K +  +QR+NLF+TRCLV+G  CSL+ID GSC N
Sbjct: 393 VEHEEEPVQGR--LLVARRTLSLQ-NKTEEQEQRENLFYTRCLVQGKVCSLIIDGGSCVN 452

Query: 456 VVSTMLIKRLLIPTQHHPKPYNLQWLNDSGTMK 488
           V S  ++K+L +  Q HPKPY LQWLN+ G M+
Sbjct: 453 VASETMVKKLGLKAQKHPKPYRLQWLNEEGEMR 472

BLAST of CmaCh17G005360 vs. NCBI nr
Match: gi|923695255|ref|XP_013657890.1| (PREDICTED: uncharacterized protein LOC106362556 [Brassica napus])

HSP 1 Score: 322.8 bits (826), Expect = 1.2e-84
Identity = 177/393 (45.04%), Postives = 256/393 (65.14%), Query Frame = 1

Query: 96   KRIEREYQYEREKEKGVGGVKLKIPTFYGKSDPEEYLQYKRKIEHVFDCNNFSEERKLKL 155
            +R  R+++  R +   + G+KLKIP F+GK+DP+ YL++++KIE VF+C ++SE +K+++
Sbjct: 1468 RRSRRDHEGRRHRRNELSGLKLKIPPFHGKADPDAYLEWEKKIELVFNCQHYSETKKIQV 1527

Query: 156  VVAEFCDYAIIWWTSLKSEWRRNYEEPIETWEELKTLMRKRYILKHYSQVLKQKLYTLQQ 215
               EF DYA+ WW  L +  RRN E PIETW E+K +MR+R++  HY + L QKL  L Q
Sbjct: 1528 AATEFNDYALSWWDQLVTNKRRNGEFPIETWAEMKAVMRRRFVPSHYHRDLHQKLRLLTQ 1587

Query: 216  GSKSVEEYYKEMETLMNRVCIDEDEEETMARFLGGLNRQLAHQVDRQAYFDMQEFLHLAI 275
            GSKSVEEY++EME LM R C+ ED E TMARFLGGLNR++  +V+ Q Y +++E LH AI
Sbjct: 1588 GSKSVEEYFQEMELLMLRACVSEDSEATMARFLGGLNREIQDRVEMQHYLEIEEMLHKAI 1647

Query: 276  KIEGQLAWEKENSKMYGISKSTTFNTWKNNANIEKIDFKVGGKYDLDKKNKAETSKGKEK 335
             +E Q+   K  S   G   S  + T K     +K  ++   K    +++K+ +   K+K
Sbjct: 1648 LVEQQV---KRRSHARGSYGSNRYQTSKE----DKPSYQKESKPQPKEESKSSSIYNKDK 1707

Query: 336  SEEYKDIRERNRDIKCWKCQGIGYLSRDCPNKRVMI-IKDGQVVTDSEKSDHDELVEEEI 395
              + +    R RD+KC+KCQG G+ + +C NKRVMI +++G+  ++ EK   D+ + E  
Sbjct: 1708 G-KVEATSSRARDVKCFKCQGRGHYANECTNKRVMILLENGEFESEDEKLRTDQELSE-- 1767

Query: 396  QEHEEELEDGSRLVLVTRRLLKTQVTKNDVDDQRDNLFHTRCLVKGTPCSLVIDSGSCTN 455
             EHEEE   G   +LV RR L  Q  K +  +QR+NLF+TRCLV+G  CSL+ID GSC N
Sbjct: 1768 VEHEEEPVQGR--LLVARRTLSLQ-NKTEEQEQRENLFYTRCLVQGKVCSLIIDGGSCVN 1827

Query: 456  VVSTMLIKRLLIPTQHHPKPYNLQWLNDSGTMK 488
            V S  ++K+L +  Q HPKPY LQWLN+ G M+
Sbjct: 1828 VASETMVKKLGLKAQKHPKPYRLQWLNEEGEMR 1847

BLAST of CmaCh17G005360 vs. NCBI nr
Match: gi|747091079|ref|XP_011093258.1| (PREDICTED: uncharacterized protein LOC105173268 [Sesamum indicum])

HSP 1 Score: 320.9 bits (821), Expect = 4.6e-84
Identity = 191/462 (41.34%), Postives = 267/462 (57.79%), Query Frame = 1

Query: 91  EILAPKRIEREY---QYEREKEKGVGGVKLKIPTFYGKSDPEEYLQYKRKIEHVFDCNNF 150
           E + P+R+ R     +  RE++ G+GGVK+ IP+F GKSDPE YL+++ ++E +F C+N+
Sbjct: 95  EDIRPRRLNRPRDRPRRPREEDGGLGGVKVTIPSFKGKSDPELYLEWEMRVEQIFSCHNY 154

Query: 151 SEERKLKLVVAEFCDYAIIWWTSLKSEWRRNYEEPIETWEELKTLMRKRYILKHYSQVLK 210
           SE +K+KL   EF DYA++WW  ++ E  RN E PI TWEE++  MR+R++  +Y + L 
Sbjct: 155 SESKKVKLAALEFTDYALVWWDQMQKERVRNGERPITTWEEMRATMRRRFVPSYYRRELH 214

Query: 211 QKLYTLQQGSKSVEEYYKEMETLMNRVCIDEDEEETMARFLGGLNRQLAHQVDRQAYFDM 270
             L  L QGSKSV+EYYKEME  M R  I ED E TMARFL GLNR +A  V+   Y ++
Sbjct: 215 NHLQRLTQGSKSVDEYYKEMEIAMIRTNIIEDNEATMARFLHGLNRDIADVVEMHHYVEL 274

Query: 271 QEFLHLAIKIEGQLAWEKENSKMYGISKSTTFNTWKNNANIEKIDFKVGGKYDLDKKNKA 330
           +E +H AIK+E QL   K    +   S S+ F  WKNN   +        + D    +K 
Sbjct: 275 EEMVHQAIKVEQQL---KRRGHLRKTSNSSAFGPWKNNPKKDTPTTSRFKQADPKHDDKV 334

Query: 331 ETSKGKEKSEEYKDIRERNRDIKCWKCQGIGYLSRDCPNKRVMIIKD-GQVVTDSEKSDH 390
            T K + +         RNRDIKC+KCQG G+++ +CPN+  MI  + G++ T+ E +D 
Sbjct: 335 ATKKVQPEPNSL-----RNRDIKCFKCQGKGHIASECPNRHTMIFNNHGELETEEEITDK 394

Query: 391 DELVEEEIQ-EHEEELEDGSRLVLVTRRLLKTQVTKNDVDDQRDNLFHTRCLVKGTPCSL 450
           +E  +E+   E+ EE E     +LVTRR L  Q+ + D + QR+NLFHTRC V G  CS+
Sbjct: 395 EESTKEDGDGEYAEEGE-----LLVTRRTLSAQMLEED-NCQRENLFHTRCQVHGKVCSM 454

Query: 451 VIDSGSCTNVVSTMLIKRLLIPTQHHPKPYNLQWLN------------------------ 507
           +ID GSC NV ST L+++L +PT  H +PY LQWLN                        
Sbjct: 455 IIDGGSCCNVASTELVQKLSLPTFKHHRPYKLQWLNECGELKVTKQVKVFFSIGRYKDEV 514

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
E7BQD7_PEA1.3e-8042.56Mutant gag-pol polyprotein OS=Pisum sativum PE=4 SV=1[more]
A5AG41_VITVI2.2e-8041.20Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_037350 PE=4 SV=1[more]
E7BQD6_PEA3.1e-7942.05Mutant gag-pol polyprotein OS=Pisum sativum PE=4 SV=1[more]
A0A151RW41_CAJCA7.2e-7641.77Uncharacterized protein OS=Cajanus cajan GN=KK1_031655 PE=4 SV=1[more]
A5AY05_VITVI3.9e-7439.56Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_009305 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
gi|823137916|ref|XP_012468777.1|1.4e-8844.03PREDICTED: uncharacterized protein LOC105786844 [Gossypium raimondii][more]
gi|823218652|ref|XP_012442007.1|2.2e-8645.01PREDICTED: uncharacterized protein LOC105767023 [Gossypium raimondii][more]
gi|923695253|ref|XP_013657889.1|1.2e-8445.04PREDICTED: uncharacterized protein LOC106362554 [Brassica napus][more]
gi|923695255|ref|XP_013657890.1|1.2e-8445.04PREDICTED: uncharacterized protein LOC106362556 [Brassica napus][more]
gi|747091079|ref|XP_011093258.1|4.6e-8441.34PREDICTED: uncharacterized protein LOC105173268 [Sesamum indicum][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001878Znf_CCHC
IPR005162Retrotrans_gag_dom
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO:0008270zinc ion binding
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0008270 zinc ion binding

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh17G005360.1CmaCh17G005360.1mRNA


Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001878Zinc finger, CCHC-typeGENE3DG3DSA:4.10.60.10coord: 346..367
score: 4.
IPR001878Zinc finger, CCHC-typeunknownSSF57756Retrovirus zinc finger-like domainscoord: 345..368
score: 8.3
IPR005162Retrotransposon gag domainPFAMPF03732Retrotrans_gagcoord: 154..253
score: 1.9
NoneNo IPR availableunknownCoilCoilcoord: 387..407
scor
NoneNo IPR availablePANTHERPTHR22847WD40 REPEAT PROTEINcoord: 107..293
score: 2.0
NoneNo IPR availablePANTHERPTHR22847:SF430MZB10.11 PROTEIN-RELATEDcoord: 107..293
score: 2.0

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None