CmaCh17G005350 (gene) Cucurbita maxima (Rimu)

Overview
NameCmaCh17G005350
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu))
DescriptionPolygalacturonase
LocationCma_Chr17 : 4071299 .. 4083774 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGGCACGACATTGTTTTATTGTCCCTTCCAATGGCCTAGCTCGTTCCATTACTTCAATGTCTACATAAATAAGAGAGATAGAGATAATTGTGAAAGTAGTCTATGTTCATAGCATATGAGTGAGGAAAATGTCTGTATGTTCAACTATAAAACCGATAATTATGATATTTGCTACAACTGGTCAGACAAAAAATCCATCTATCCATAAATTCGAAAGTTTGATTTTAATATTGAAATAAATAAATGTTTTTGATATGTTGTTTATGTGGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTNTTTTTTTTTTTTTTTTTTTTTTTTTTTGTTTGTCTTAAAGCTTGATATGATTAGTACAAGTGAAATATAAACGACGTTAATTACCTATCGACATAGATTATATATGAAAATTTGTTAACTTATTTTGGTCATGATTGATAATCAAAACAACTATATCAGATGGGACATTGCATTAGAAGGATTTTGACCTACGGTAAAGGTAAGGTAGAGCCTTAGGCTTGGCCTAGAGTAGAGGCAAGTCGGTTAGAGTTGTTACATGTATGATTGAACAATAGGTTAGAGTTGTTACACGTATGATTCAACAAAGTTTAGTTTCTATATAAGTGATGTTTGGTTAGTGGCGAACCTTGTTAAAGTCTAATGAAGCCATAAAGTCAGGTAAAAAAGGTTTTTCATGATAATATCTTGGCTAACTCATTCACTTAAAGCACATATCGCTGATGAAATTATTCACGCCAAGACAGCTCATCAAGTGTGGGTTGATCTTCACGATCAATTCTCACAAAAGAATGCTCCAGCAATTTTTCAGATACAAAAGTCGATAGCAATGATGTCACAGGGAACCATGGCACTCTCAGCTTATTTCACCAAGGTCAAAGCATTATGGGATGAATTGGAAGCGTACCGCATGTTGAACACAACTCTTTGTGGGAAACACTCACACTCTTCATTAAGACTAATCGAGAAGAGAATACAAGACACTTTGTAGAATACTCATACTTTATAATGCTTGGGATTTCTTGGGATGAAAAACTAGATAGGGTCGAGGGGTATTTCTACTATACCCTACGCACTCTAAACCTAACAAATGTAAGTATTTCTCCTAAAATATCGAGATATCTTTCTAAAAATATCGAGATATCTTTCCGAAAATATCTAGTATCTTTCCTAAAATCTCTACTAAAATAAATATACAATGGGCTCTTAGCTTTCTTTCTCAAGCTCATGCAATTTGTTGTTTTTTAAAGGACCTCTTACCTGTCTTCTCTAATGTTCTGACATTTATAATTTGGTAAATGTTCTTCATTTTCTAGAGGATAACCTTTAAACAATCAAGTGAACAAGTGAATTTTTTTTTAGTTTTCAATTTTATTGAGTTCTGTTCAAATTTTTAGCTTCATTACCGAATCTCACAAAATATTATTTGATTATACAAAATGTTTAGAGTTTGAGGTTCAACTTCATCTAATTCAACCGTTAAGGGAATAACATCACTTGATAGCAAGAACTTCCATATCAACGTCCTGGGCTGCAACAACCTCACGTTCCATAATATCAATATAATTGCACCAGAAAACAATCCCAACATTGATGGAATACACATCGGTCGATCAAATAAGATCACACTCACAAAGTCCAAAATTCCAACCGGAGATGATTGCATTTCTCTTGGAGATGGAAGCAAACTAATTGAAGTCACCAACGTGACATGCGGGCCAGGACATGGAATAAGCATCGAAAGTCTTGGAAGATACACTAATGAAGAACCTGTTGAAGGTGTCACCGTAAAGAACTGCACGCTAATTAACACCACTAATGGTGTCAGGATCAAAACGTGGCCAGCTTCTGCTGCTAGCGGCACCGCCACCAATATGCACTTTTTGGACATTATAATGGTCAATGTTAGCAACCCTATTCTAATAGATCAAGAGTATTGTTCGTGGAATCAGTGCAATCGGCAGGTATTGATCGTATTCTCGAACCTTTGATTCATTTTTTCGTTATAACGTCACAAATAAACCATTTGTTGTCTCATTTTAATTTTCAGATTCTTTCAAAAATTAAGATTCGTATCGTGAGCTTCAAGAACATTAGAGGAAGTTCTGCAACTCCGCTGGCAATCAGACTCATTTGCAGCCGTTACTTACCATGTTACGATGTAAAAGTAAGCAACATTGACCTCACTTACAATGGAATAAAAGGTTCTATTTCCTCCCAATGCACCAATGTGAAACCCATCATTTCAGGAAGACAAAACCCCAAGATATGCTCCTCTCCTTATGTTGTCCGATAAATTGTTCATCGCCATAGAACTTCAAAATAATAGAGAACCTTAATTAAAAAAAGAAGACTGCCTCTATCCATTTGACTCTCATTCTTTTGAGTTTCTTTTGTTGTACTTTTCGAAATAAATAAGATGGTCGAATGTTTGGAGGAGACTTTGTGTCGTGAACCACCTAATATTTCTAGTACCTCGAACTTATAAAATAAAATGGTTTCACACTTCTTTTTCATTTTAGATTTGAATTGGAATAAGGCAATGTTTATTTAAAAAAAAACCAATCCATTACTCAAGAAAAAAATCTTTAACCAACAAAAATATCTAACTCCTCTTTCTATTAGTTACCCTAAATAAGTCATTTACCATTAGAAATCTTTTAGACGGAATCGATAAGTTAGATCGAATCTCCTAACCATATCCGTCACATATTGCACAGATCCATCATTATTGTTAGAGAAGAATTGACATTAGAGGTGACTAATCCAGCAAGTCTTGTTCTTAAATCTATCTTTTTCGTCATTTGTGTAATTTCGGTTGCAATTTCTGAGTATGAATTGAAAAAATTTAGGTTTTCGATTAGAAAATTAAGTGACAAGTATTAATATGTATTTTAGGAATTTACATTTAATATCGAATTATCTACCTATTTATCCCGACCAATTTTAGTTTTAGGAAAAATGTCGATAGTCCTAGAAAAATTAAATATCAAAAGTAGCTAAATGTTCTAGGAGTTTAATGTACGAGAACTCATCAAAATTGGCCCAAATCCGTGGTAAATAAGGCCAAAAAAACAACAAAAATCACAAAAGAGAGAATAAAAACAAAACATGATCTCGATCAATGATGCTATGTTTCGTGTTTTAAAGTCTCAAGATATTTGTTGTTCATGAGTTTAGCTGGGTCGAGTTGAGATATTTTTTAAGCCTAATTAGATCATAAATTTATTCAAGTCAAACAACCCTTATTAAATAATTAAACCTTTTGATTTTTATGTTTAGAATAATATCTTAAGAAAAAAAAATGGGAACTAAGCTTTTTGGAAATCGTGCCCTTGTTAAGATTTGGACCATGATTTCAAATTTGGATTCAACAACTGATTCCCTTGACATTCCCCTGCATCTACCATGACATACCTACGTTACCAACTTATCTTGAATTGCTATAAGAGTGAAAACTATCCACAAACCAACACGATTTTTTGTAGCATGTTTTTTTTTTTGTAAATGTTTACTGAATCCACCCCACCTAAATGGTGGTGAGAGTTCTCTTATTTATAATCATTTACCGAATACAGAAATATGGTAAATTACAAATAATATGAAAATAACAGTGAGAGGAAAGAATAATAAATGAATACAATATATTTGCCTTTAATAAAAGGGCAAATATGGTAAGCAAGGCAAATATCTAGATGTTTGCCTGATAATGAACGGTCAACTATCCTTAACATCCCCCCGCAAGCTGAGCGTCGGATTTGAACGAACGTGAAGCTTGGATCTGAAAAATTCAAAGAGAGGTAGAGAAATACTTTTTGTGAAGATGTCAGCAACTTGGAGATGAGAGGGTACATATTGTGTGCGAAGATTGCCAGCGATAACAAGTTCTCGAAGGAAATGATAATCTAGTTCAACATGTTTGGCCCGCTTGTGAGAAACGGGATTAGAGCTCAAAAAAATAGCACTTTTGTTATCACATAAGAGTAGAGGTTGCTGTGAAATAGGGACCTTGAGGTCATGCAAAAGATGCGTAACCCAAAGAAGTTTAGCAGCAGTTGTGGCAAGAGCACGATACTCAGATTCACAGCTGGAGCGTGAGATAGTAGGTTGCTTTTTGGCACTCTAAGAAATGAGATTGTTACCAAGATAAATAGAATAGTCTGATGTAGAACAATGGGTATCTGGACAACCATCTCAGTCAGCATCTGAATAAGCGACTAGCGTACTAGGAACAGTGGATGGACGAAAGGTAAGACCAAAGTGGAGTGTTTCTTTGACATAACAAAAAATACGTTTGACAGCAAGAAAGTGATCTACAGTAGGAGCATGCAAGAATTGACTGACAAAATTGACAGCATAGGCAATATCTGGACGCGTAATAGTCAAGTACTGAAGGGCACCAACAAGAGATCTATAGAGAGTAGGATCAAAGAAAGGAGAACCATCAACAGTCAGGTGTTGAGAAACAACCATAGGAGTGTGGACTGGTTTGCTATCGAGAACCTAAGCACGAGTAAGAATATCTTGAGCATATTTTAACTGACTAATAAAGAGACCATCAGGAGTGGGTGAGGCTTCAAGACCAAGAAAGTAACTGAGAGAACCCAAATCTTTGGTAGCAAACTCAGAATGAAGCTTGCGAGTAAAGCTGTCAATAAGAGATGAGTTGTTGTTGGTAACAATAATGTCATCAGCATAAAGAAGCAAATAGATAAGGTTAGTTTGCTGATGAAAGACAAAAAGGGACGTGTCAGCGCTACTGCAAGAAAACCCAAGTGTGAGAAGAAATGAGCTAAAATGCTGAAACCAGGCACGAGGAGCTTGCTTTAAGCCATAAAAGACTTTCTTTAATAGAATAACATGAGTGGGAAATCGAGGATCAATATACCCCGAAGGTTGTTCCGTATGAACACATTCAATAAGAGTTCCATTGAGAAAAGCATTCTTGACATCAAGTTGTCGAAGAGGCCATTTATTTGTGACTGCAATAGAGAGCACAACACGGACAGTGGTAGCTTTGACAGCCGGACTGAAAGTGTCAGTGTAGTCAAGACCAGGAACCTGAGTATAAACTTTGGCAACAAAAAGAGCCTTGAAACGCTCGATGGATCCATCAGGAAAATATTTAATACGAAACACCCATTTAGAGGCCACGATGTTGGTGTTGGTAGGGCGAGGAACCAAAGTCTAAGTATTATTTTGTTGAAACGCTCGAATTTCTTCATCCATGGTAGCCACCCAAGCAAGATTCTTAGTAGCAGATTTGAATCCTTTTGGCTCAGTGGATGCAAGAAGAGCAGAAAGAAGTCCAGATGAGCCCAAAATACCAAGATTTGTTGGATGACGAGTCTTGAATATACTAGCTTTGGCTCGTGTGATCATAGGATGAATGCCCAAAGAAGAGTAATCAACAGTAGGTTCAATAGAAGCCGAATTAGAAGTCGAGGGTGGCAAAGTGGAACCTACAAGAGAAGTATCAACCTGCACAGACTCATCCACAAGATCAGAACAAATATCACACGAGGATGAACTAGATCGAGGAATGTGCGATGATGAAGTGGTAGGGGGGGATGAATCAATATGATAAAGATGTGGTTCTAAGAAATTTGAAATAGGAATAGAGGAAAGAGGTTGGGCCGGGGAGTTAGGGATAGCAGGAAAGTGAGTTTCATCAAATTGAGCATGGCGGGTGATATATAGCTTAGTGGTGGTGGGATCAAGACAGAGGAACCCTTTATGAGTAGGACTATAACCCCAAAAAATACAAGGAATGATGCAGGGAGAAAGCTTGTTAGGCATATAATCTCGCAAATAAGGATAAACACGACAACCAAAGGGATGAAAATTGTCATAATGTGGAATGTAGCCATTAAGGAGTTCAAAGGGTGACTTACCTTCAAGAAGTGGAGTAGGAAACCGGTTGATAATATAAGCTGCAGTGCTGAAAGCGTCAACCCAAAAACGAGGAGAAAGATGAGAGTGAAAGAGAAGGGTCAAGCCAGTCTCAGTCACATGACGATGTTTTCTCTCAGCAAGACCATTTTGAGTAGGTGTATATGGACAAGAGAGTTGATGGTCGATGCCAAAATTACGTAAATGAGTTTTGAAACAAGTGCTAGTAAATTCAGTACCTCCATAGCTTTGAAATACCTTGATACGAGAAGAATATAGATTTTCCACAAATTTTTTTAAATTGAAGAAAAATATCACAGAAATCATATTTAAATTTTAAAGGGTAAAGCCAAGTGAATCGAGAATAATCATCAATAAAAATAACATAATAAAGAAAACCCGAATTTGATTTGACGGGAGAAAGACCCCAAAGATCACAATGAATAAGATCTAACACATGAGACGACCTACGTTTATTGCGGGAATAAGGCAATCGATGACTTTTCGCAAGCTGACAAGTATTACATAATGATGGAGAAGGCAATAAAGATGTAAGAGAAAGATGACCTTTTCTATTTAAAAAAGAAATAACATAATGATTCACATGACCCAGACGAGCATGCCATAAATCATATGAAACATGTAAAGATTTGTTTCTAAGGACTGAAATAAAAGCAGAGTTGCCGCGCTCCAACACATATAGCCCTCCATCTCTTTTACCGGTTGCTACCACTCTTCCTGTTTGACAATTCTGGATAGTAATAAGATTATTAATGAATGTAACGGAGAGAGGAAAATCAGACGTTAATTTACTTATGGAAAGAAGATTTTTAGTAAGGTAAGAGACAACCAAGACATTTAATAAGTGAATATTTGGAACAGGAGAAAGAGTACCGGTGTGGGTAATGGGTAGGGATGCACCATTTCCTACGATCACAGAGTCCTTACCCGTGTAATTTTTAGACTGGTCCAAAATAGATGGGTTGGATGTCATATGGGCTAAAGCCCCAGTGTCCAGAAACCAATCAGCAGCAACGGGTCCAGCAATAGAACATGATGTGTTAAAGGCTTCAGCAAGGTGAGCATGAGAAGAATCAAGTCGAACATACCGTTGGTTGCAGCGGTCAGCATAATGGCCCTCTTTGCGGCATATTTGGAGTGGAGTCAGAGGATTCAAGGGAACAGTGGAACAACTCAAAACTTTCAGCTTTAGAAACTAAATCTGCAAAACATGGGATAGGGGTGAGAGCCATCTAAGCAGTAGAAAAAGCTGAAAATTCGGTGTCGAGTCCATGAAGGAACCAGTGCACTTTATCAATGTCCTCGACGTGTCTGCCAATGGCATGAAGTTGGACACAAATTTTTTTTGAAGGCACGGGCATACTCAAGAACAGGTTTGGTGCCATGTTTCATCAATTGTAAGTCATCCATGAGTCTCAATTCACGAGCTTTCGAATGATGGTTGAACGCAGTTTCCAACGCAAGCCAAACATCACGTGCAGTAAAGAGACCAACTGTTGGGTTTTATGTCCTAAAACTCATAGTTTGTAAACAAAAACATATTCTATTTTCAATAAAGTTATTATGTTTGTTTATTCAGTAAAGATTGTTATTGAATAAAGTAAACTTTACGATTATTAATCTAAATCCAGGGATAAGGCTGAGTACCTTATACTGGGGACACTATAGATGTGACCCACTTTTGTATAAGACATAAACAATGTGATCACTAAATTGTACATGTGGAGACATGTGAGTGGGGGGGTGTCCTATGCAATGAGTATTGCATAAGATCTGACCATGAAGAAAATCCCTCTCACTTTATAATGTCATTTACTGTTGAGACTGATTTTCTTTTCATTCGATGACCTAGGTAACTCGATCTTAATCCTGAGCTAACCATGAACTCGTGTTTATTCGGATTATCCTTAGATTTGCATGGGTGAGAGTGGCTCGAGTTTGCCGACTCAATAGGTCTACCATTTCAGGGGTAAGACTAGGTGAATGGCTGGGGACGTGGGGTGCAAGATGGAATTCTCTCCTACCCACTTTTAGGGATAGAAGAGAGGTAGTTCCTTTAAGCACGGACTCCAGGTCTTAAACAAGGGGCCTCACCCTCTCATTGGCCTGAGAGAGATTCGGTTTACTGGTTGGACCACAAACCAATTGTTCATTACAGGATCAGTGAGACATAAGGAACAAGAAGTAACTTCATGGGTAAAATGGTAAATTGACTCAGCTCTAGTTACGGTCAACCTATGAATGATCGACTTACTAATCATGGTTATATCAAATGGACAGAAATATATCTATAGTGAGGGGAGTGCAACTACTAAGCTATAGTGGAATGTCCTAGTATACACGAATGTTGGTTAACAAGGTTAATGAGTTTAACCGGTTAATTTTGGATCGTTGAAGCCCATGATCTATAGGTCCATTAGGTCCCTCTGCTAGCTCATATCGGATTAAACCATAGAACAGTGTGACGAGTGAGTTCGAAGTGTTTGAATTCAAATTAGAAAATATGTGCTACATATATACGATATATTTAACCGCATTTTTGTTTTATTTACAATTAAACAAAAAGAGAGAATCTGAGATATTTAAATATCTTAATCAAATATGTGTCGGAATTTATTGGGATTGACATTTGAATTAATATTAAATATTAATTAAATAGTTTAATTAATAATTTAATATTACTCAAAATTTGGTGAACTCAAACTTGTTGCTACATAATCTCAAACATTTGAGTGGAATTTTGAGTGTCAAAATTTGGTGATCTCAAATTTGCATGAACATGCAAACATGACTCTATAAATAGAGTGATCATGGTACATGGAAGGTCTTCCTTGGGAAAAACCTTGAGAAAAACATCTCACAAACTCTCTCTTCATATATACTAAATCTCCCCCAAGTTTATTCACTCACCGGATTCCACAATCTCGTTCTAAGGCCGGAGAATAGTGGAGAAGACACTAGTGGTGGTTCAAAACCGGTTCGTGAGGAAAAAGAAACTTGAGCGACAAAAGATTAACACCATCACCAAAACTTGAGCAACAAAAGGTTAGTATTCAAACTCATTGAGTTTTAATACTTATGAACATGCTAGTAATTTACTATAATTGATGTTATAAGAGTGTCTAAGATCCAAATTGCTTCATCACCAACGACAACAGCATGGCTTCCTCAATGAGAGAGGAGAGCAAGAGACAAAGAAGTCGTTGATCGGCTGCTCTCTACGCCAAATATTTGGGATTGAGTGTTGAGGAGGTTTTTGGTTCAAAGTGAGGTGGTGGAACCATATTTCCATCAACATAGCCCAGCATGTCTTGACTCTCAAAGAAAGGGAGAAGTTGGCTTTTCCAAAGAAGATAATTGGAGGAAGAAAGTTTGATGGTGATCATATGGATTAGAGTATTGAAAGGAAGAAGATGATGAGAGGATTCGGAAGCCATAGAGAAGAAAGGATTAGGGTTGTTAAACCGAAATGGCTCTGATACCATGTAAATGTTTGCTGAATTCACCACACCTAAATGGTGGTGAGAGTTCTTTTATTTATAATCATTTACATAATACAAAAATATGGTAAATTACAAATAATATGGAAATAAGGAAAGAATAATAAATGAATATAATATATTTGCATTTAATAAAAGGGCAAATATGGTAAGCCGTAGGTAAGGCAAATATATGATATTTGTCTTATAATGAACGGTCAACTATCCTTAACATTTTTCCTTACTCACATGCCTCCTAAGAGTAATCTCATACCTAAAATTTGGACCAGGATTTGGAATCCAAACTTGGCATCAGATGCCCCCACAATTTCTTGCATCTTTAATGATATGGTCACATTAGTTACTTGTTTTGAAATGCTCCTAGGATTGAAAACTATCTCTAAAAATGAGGTTGCCTACTTTTGGTGGTTCAATCATAAGACTCAAAAGTTAAGCGTGTTTAGTTTCGAACAATATTATGTTTGATGGTCTCTTGAAATTTTGTTAAATGAGGTTACCAAATTTTGTTAATTTGGTAAATGTTCTTCATTTTCTAGAGGATAATCTTTAAACAATCCATTGAAAAAGTGAAATTTTTTTGAGTTTTCAATTTTATTGGGTTTTGTTTAAATTTTTAGCTTCATTACCGACTCTCACAGAATATTATTTTATTATACAAAATGTTTAGAGTTTGAGGTTCAACTTCATCACCAATTCAACCGTTAAGGGAATAACATCACTTGATAGCAAGAACTTCCATATCAACGTCCTGGGCTGCAACAACCTCACGTTCCATAATATCAATATAATTGCACCAAAGAATAGTCCCAACACTGATGGAATACACATCAGTCGATCAAATAAGATCACAATCACAAAGTTCAAAATTGCAATTGGAGATGAATGCATTTCTCTTGGAGATGGAAGCAAACTAATTGAAGTCACCAACGTGACATGCGGGCCAGGACATGGAATAAGCATCGGAAGTCTTGGAAGATACACTAATGAAGAACCTGTTGAAGGTGTCACCGTAAAGAACTGCACGCTAATTAACACCACTAATGGTGTTAGGATCAAAACGTGGCCAGCTTCTGCTGCTAGCGGCACCGCCACCAATATGCACTTTTTGGACATTATAATGGTCAATGTTAGCAACCCTATTCTAATAGATCAAGAGTATTGTCCGTGGAATCAGTGCAATCGGCAGGTATTGATCGTATTCTCGAACCTTTGATTCATTTTTTCGTTATAACGTCACAAATAAACCATTTGTTGTCTCATTTTAATTTTCAGATTCTTTCAAAAATTAAGATTCGTATCGTGAGCTTCAAGAACATTAGAGGAAGTTCTGCAACTCCGCTGGCAATCAGACTCATTTGCAGCCGTTACTTACCATGTTACGATGTAAAAGTAAGCAACATTGACCTCACTTACAATGGAATAAAAGGTTCTATTTCCTCCCAATGCACCAATGTGAAACCCATCATTTCAGGAAGACAAAACCCCAAGATATGCTCCTCTCCTTATGTTGTCCGATGAATTGTTCATCGCCATAGAACTTCAAAATAATAGAGAACCTTAATTAAAAAAAGAAGACTGCCTCTATCCATTTGACTCTCATTCTTTTGAGTTTCTTTTGTTGTACTTTTCGAAATAAATAAGATGGTCGAATGTTTGGAGGAGACTTTGTGTCGTGAACCACCTAATATTTCTAGTACCTCGAACTTATAAAATAAAATGGTTTCACACTTCTTTTTCATTTTAGATTTGAATTGGAATAAGGCAATGTTTATTTAAAAAAAAACCAATCCATTACTCAAGAAAAAAATCTTTAACCAACAAAAATATCTAACTCCTCTTTCTATTAGTTACCCTAAATAAGTCATTTACCATTAGAAATCTTTTAGACATAATCGATAAGTTAGATCGAATCTCTTAACCATATCCGTCAGATATTGCACAGATCCATCATTATTGTTAGAGAAGAATTGACATTAGAGGTGACTAATCCAGCAAGTCTTGTTCTTAAATCTATCTTTTTCGTCATTTGTGTAATTTCGGTTGCAATTTCTGAGTATGACTTGAAAAAATTTAGGTTTTAGATTAGAAAATTAAGTGACAAGTATTAATATGTATTTTAGGAATTTACATTTAATATCGAATTATCTACCTATTTATCCCGACCAATTTTAGTTTTAGGAAAAATGTCGATAGTCCTAGAAAAATTAACTATCAAAAGTAGCTAAATGTTCTAGGAGTTTAATGTACAAGAACTCATCAAAATTGGCCCAAATTCACAGTAAATAAGGCAAAAAAAAAAAAAAAACAACAGAAATCACAAAAGAGGGAAAATAAAAACAAAACTTGGTCTCGATCGATGATGCTATGTTTCGTGTTTTCGATTCTTAAGATATTTGTTGTTCATGAGTTGAGTTGGGTCGATGAATTATGGAATGACCAAATATGTATTGTTTTCCATGAGTAGTTTTATAGTTTTATAGGTAGCTTTTGAGTTTGGTAATGTTACCGTTTTAAAATGTTTTATTTAAATTTGTGCCTATGTTATTAAACAAATTTTATTACAAAAAGGAAAAACAACATTATAAATTTACATGTAAGAGAGTTGAATAAATTTTTATGGTTATGGATTAGCAGCCCAGAAACCATGGAAGCCAAGAGGAAAATTGAGATGCTTTGGGACTTCAAGCCTTGCTACAACTGCATCGCCTTCTCCAATTTTTTTAGCCTCCAAAATCATAAGATAACATCTTTGTATTGATACTGCGTACTGCATTTACACACTCAAATCATTTTCTTCAATTTCTTAATGTTTAATAAAAAATAATAATAAAAGATGTTTTATGAGTTTGCTAACCTCAACCACAAGAACATATCCATCATCTTCTCCATCTCCTTTAGGAACAAAAACAGGTTCTCCAACGAATCTCCGATTACCCGCAGACCATGTTCGGGCGGTGTTCGTGACCATGTCAAGTTTTACGATCATATCAAATGGAAACGATGGTAG

mRNA sequence

ATGGGGCACGACATTGGAATAACATCACTTGATAGCAAGAACTTCCATATCAACGTCCTGGGCTGCAACAACCTCACGTTCCATAATATCAATATAATTGCACCAGAAAACAATCCCAACATTGATGGAATACACATCGGTCGATCAAATAAGATCACACTCACAAAGTCCAAAATTCCAACCGGAGATGATTGCATTTCTCTTGGAGATGGAAGCAAACTAATTGAAGTCACCAACGTGACATGCGGGCCAGGACATGGAATAAGCATCGAAAGTCTTGGAAGATACACTAATGAAGAACCTGTTGAAGGTGTCACCGTAAAGAACTGCACGCTAATTAACACCACTAATGGTGTCAGGATCAAAACGTGGCCAGCTTCTGCTGCTAGCGGCACCGCCACCAATATGCACTTTTTGGACATTATAATGGTCAATGTTAGCAACCCTATTCTAATAGATCAAGAGTATTGTTCGTGGAATCAGTGCAATCGGCAGATTCTTTCAAAAATTAAGATTCGTATCGTGAGCTTCAAGAACATTAGAGGAAGTTCTGCAACTCCGCTGGCAATCAGACTCATTTGCAGCCGTTACTTACCATGTTACGATGTAAAAGTAAGCAACATTGACCTCACTTACAATGGAATAAAAGGTTCTATTTCCTCCCAATGCACCAATAGTTTGAGGTTCAACTTCATCACCAATTCAACCGTTAAGGGAATAACATCACTTGATAGCAAGAACTTCCATATCAACGTCCTGGGCTGCAACAACCTCACGTTCCATAATATCAATATAATTGCACCAAAGAATAGTCCCAACACTGATGGAATACACATCAGTCGATCAAATAAGATCACAATCACAAAGTTCAAAATTGCAATTGGAGATGAATGCATTTCTCTTGGAGATGGAAGCAAACTAATTGAAGTCACCAACGTGACATGCGGGCCAGGACATGGAATAAGCATCGGAAGTCTTGGAAGATACACTAATGAAGAACCTGTTGAAGGTGTCACCGTAAAGAACTGCACGCTAATTAACACCACTAATGGTGTTAGGATCAAAACGTGGCCAGCTTCTGCTGCTAGCGGCACCGCCACCAATATGCACTTTTTGGACATTATAATGGTCAATGTTAGCAACCCTATTCTAATAGATCAAGAGTATTGTCCGTGGAATCAGTGCAATCGGCAGATTCTTTCAAAAATTAAGATTCGTATCGTGAGCTTCAAGAACATTAGAGGAAGTTCTGCAACTCCGCTGGCAATCAGACTCATTTGCAGCCGTTACTTACCATGTTACGATGTAAAAGTAAGCAACATTGACCTCACTTACAATGGAATAAAAGGTTCTATTTCCTCCCAATGCACCAATATGTTTTATGAGTTTGCTAACCTCAACCACAAGAACATATCCATCATCTTCTCCATCTCCTTTAGGAACAAAAACAGGTTCTCCAACGAATCTCCGATTACCCGCAGACCATGTTCGGGCGGTGTTCGTGACCATGTCAAGTTTTACGATCATATCAAATGGAAACGATGGTAG

Coding sequence (CDS)

ATGGGGCACGACATTGGAATAACATCACTTGATAGCAAGAACTTCCATATCAACGTCCTGGGCTGCAACAACCTCACGTTCCATAATATCAATATAATTGCACCAGAAAACAATCCCAACATTGATGGAATACACATCGGTCGATCAAATAAGATCACACTCACAAAGTCCAAAATTCCAACCGGAGATGATTGCATTTCTCTTGGAGATGGAAGCAAACTAATTGAAGTCACCAACGTGACATGCGGGCCAGGACATGGAATAAGCATCGAAAGTCTTGGAAGATACACTAATGAAGAACCTGTTGAAGGTGTCACCGTAAAGAACTGCACGCTAATTAACACCACTAATGGTGTCAGGATCAAAACGTGGCCAGCTTCTGCTGCTAGCGGCACCGCCACCAATATGCACTTTTTGGACATTATAATGGTCAATGTTAGCAACCCTATTCTAATAGATCAAGAGTATTGTTCGTGGAATCAGTGCAATCGGCAGATTCTTTCAAAAATTAAGATTCGTATCGTGAGCTTCAAGAACATTAGAGGAAGTTCTGCAACTCCGCTGGCAATCAGACTCATTTGCAGCCGTTACTTACCATGTTACGATGTAAAAGTAAGCAACATTGACCTCACTTACAATGGAATAAAAGGTTCTATTTCCTCCCAATGCACCAATAGTTTGAGGTTCAACTTCATCACCAATTCAACCGTTAAGGGAATAACATCACTTGATAGCAAGAACTTCCATATCAACGTCCTGGGCTGCAACAACCTCACGTTCCATAATATCAATATAATTGCACCAAAGAATAGTCCCAACACTGATGGAATACACATCAGTCGATCAAATAAGATCACAATCACAAAGTTCAAAATTGCAATTGGAGATGAATGCATTTCTCTTGGAGATGGAAGCAAACTAATTGAAGTCACCAACGTGACATGCGGGCCAGGACATGGAATAAGCATCGGAAGTCTTGGAAGATACACTAATGAAGAACCTGTTGAAGGTGTCACCGTAAAGAACTGCACGCTAATTAACACCACTAATGGTGTTAGGATCAAAACGTGGCCAGCTTCTGCTGCTAGCGGCACCGCCACCAATATGCACTTTTTGGACATTATAATGGTCAATGTTAGCAACCCTATTCTAATAGATCAAGAGTATTGTCCGTGGAATCAGTGCAATCGGCAGATTCTTTCAAAAATTAAGATTCGTATCGTGAGCTTCAAGAACATTAGAGGAAGTTCTGCAACTCCGCTGGCAATCAGACTCATTTGCAGCCGTTACTTACCATGTTACGATGTAAAAGTAAGCAACATTGACCTCACTTACAATGGAATAAAAGGTTCTATTTCCTCCCAATGCACCAATATGTTTTATGAGTTTGCTAACCTCAACCACAAGAACATATCCATCATCTTCTCCATCTCCTTTAGGAACAAAAACAGGTTCTCCAACGAATCTCCGATTACCCGCAGACCATGTTCGGGCGGTGTTCGTGACCATGTCAAGTTTTACGATCATATCAAATGGAAACGATGGTAG

Protein sequence

MGHDIGITSLDSKNFHINVLGCNNLTFHNINIIAPENNPNIDGIHIGRSNKITLTKSKIPTGDDCISLGDGSKLIEVTNVTCGPGHGISIESLGRYTNEEPVEGVTVKNCTLINTTNGVRIKTWPASAASGTATNMHFLDIIMVNVSNPILIDQEYCSWNQCNRQILSKIKIRIVSFKNIRGSSATPLAIRLICSRYLPCYDVKVSNIDLTYNGIKGSISSQCTNSLRFNFITNSTVKGITSLDSKNFHINVLGCNNLTFHNINIIAPKNSPNTDGIHISRSNKITITKFKIAIGDECISLGDGSKLIEVTNVTCGPGHGISIGSLGRYTNEEPVEGVTVKNCTLINTTNGVRIKTWPASAASGTATNMHFLDIIMVNVSNPILIDQEYCPWNQCNRQILSKIKIRIVSFKNIRGSSATPLAIRLICSRYLPCYDVKVSNIDLTYNGIKGSISSQCTNMFYEFANLNHKNISIIFSISFRNKNRFSNESPITRRPCSGGVRDHVKFYDHIKWKRW
Homology
[Close]
BLAST of CmaCh17G005350 vs. Swiss-Prot
Match: PGLR_OENOR (Exopolygalacturonase (Fragment) OS=Oenothera organensis PE=2 SV=1)

HSP 1 Score: 282.0 bits (720), Expect = 1.4e-74
Identity = 134/243 (55.14%), Postives = 175/243 (72.02%), Query Frame = 1 

Query: 217 GSISSQCTNSLRFNFITNSTVKGITSLDSKNFHINVLGCNNLTFHNINIIAPKNSPNTDG 276
           G I    + +LR   +TNS ++ +T+LDSKNFH+NV+GC NLTF    I A + S NTDG
Sbjct: 100 GPICKTLSMNLRLYAVTNSILRDVTTLDSKNFHVNVIGCKNLTFERFKISAAETSINTDG 159

Query: 277 IHISRSNKITITKFKIAIGDECISLGDGSKLIEVTNVTCGPGHGISIGSLGRYTNEEPVE 336
           IHI RS+ + I   +I  GD+CISLGDGSK I +TN+TCGPGHGIS+GSLGRY NEE V 
Sbjct: 160 IHIGRSDGVNIINTEIKTGDDCISLGDGSKNINITNITCGPGHGISVGSLGRYKNEESVV 219

Query: 337 GVTVKNCTLINTTNGVRIKTWPASAASGTATNMHFLDIIMVNVSNPILIDQEYCPWNQCN 396
           G+ VKNCT+  + NGVRIKTWP S   G A+ MHF DI M +V  PILIDQ YCP+NQC 
Sbjct: 220 GIYVKNCTITGSQNGVRIKTWPKS-EPGEASEMHFQDITMNSVGTPILIDQGYCPYNQCT 279

Query: 397 RQILSKIKIRIVSFKNIRGSSATPLAIRLICSRYLPCYDVKVSNIDLTYNGIKGSISSQC 456
            ++ S +K+  +SFKNI+G+S T  A++L+CS+  PC  V++++IDLTY+G  G  +S C
Sbjct: 280 AEVPSSVKLSKISFKNIKGTSTTKEAVKLVCSKSFPCNGVELADIDLTYSGKGGPATSVC 339

Query: 457 TNM 460
            N+
Sbjct: 340 ENI 341

[Close]
BLAST of CmaCh17G005350 vs. Swiss-Prot
Match: PGLR_MEDSA (Polygalacturonase OS=Medicago sativa PE=2 SV=1)

HSP 1 Score: 279.3 bits (713), Expect = 8.8e-74
Identity = 127/231 (54.98%), Postives = 170/231 (73.59%), Query Frame = 1 

Query: 229 FNFITNSTVKGITSLDSKNFHINVLGCNNLTFHNINIIAPKNSPNTDGIHISRSNKITIT 288
           FNF+ NS V+G+TS DSKNFH+ V GC N+TF    I AP +SPNTDGIH+ +S  + I 
Sbjct: 152 FNFVNNSIVRGVTSKDSKNFHVMVFGCKNITFDGFTITAPGDSPNTDGIHMGKSTDVKIL 211

Query: 289 KFKIAIGDECISLGDGSKLIEVTNVTCGPGHGISIGSLGRYTNEEPVEGVTVKNCTLINT 348
              I  GD+C+S+GDGSK I V  V CGPGHG+S+GSLG++T EE VEG+TVKNCTL  T
Sbjct: 212 NTNIGTGDDCVSIGDGSKQITVQGVNCGPGHGLSVGSLGKFTTEENVEGITVKNCTLTAT 271

Query: 349 TNGVRIKTWPASAASGTATNMHFLDIIMVNVSNPILIDQEYCPWNQCNRQILSKIKIRIV 408
            NGVRIKTWP +  + T +++HF DI M NV NP++IDQEY PWNQC+++  SKIK+  +
Sbjct: 272 DNGVRIKTWPDAPGTITVSDIHFEDITMTNVKNPVIIDQEYYPWNQCSKKNPSKIKLSKI 331

Query: 409 SFKNIRGSSATPLAIRLICSRYLPCYDVKVSNIDLTYNGIKGSISSQCTNM 460
           SFKN++G+S T   + LICS  +PC  V+++N+DL +NG     +++CTN+
Sbjct: 332 SFKNVKGTSGTAEGVVLICSSAVPCDGVELNNVDLKFNG--APTTAKCTNV 380

[Close]
BLAST of CmaCh17G005350 vs. Swiss-Prot
Match: PGLR_TOBAC (Polygalacturonase OS=Nicotiana tabacum GN=PG1 PE=2 SV=1)

HSP 1 Score: 278.5 bits (711), Expect = 1.5e-73
Identity = 131/235 (55.74%), Postives = 177/235 (75.32%), Query Frame = 1 

Query: 225 NSLRFNFITNSTVKGITSLDSKNFHINVLGCNNLTFHNINIIAPKNSPNTDGIHISRSNK 284
           N+L FN +TNST+K IT+LDSK+FH+NV  C NLTF   N+ AP NSPNTDGIH+SRS+ 
Sbjct: 142 NNLSFNSLTNSTIKDITTLDSKSFHVNVNQCKNLTFIRFNVSAPANSPNTDGIHVSRSSS 201

Query: 285 ITITKFKIAIGDECISLGDGSKLIEVTNVTCGPGHGISIGSLGRYTNEEPVEGVTVKNCT 344
           + IT    + GD+CIS+GD ++ + +T VTCGPGHGIS+GSLG   +E+PV GV V+NCT
Sbjct: 202 VNITDSNFSTGDDCISVGDETEQLYITRVTCGPGHGISVGSLGGNPDEKPVVGVFVRNCT 261

Query: 345 LINTTNGVRIKTWPASAASGTATNMHFLDIIMVNVSNPILIDQEYCPWNQCNRQILSKIK 404
             NT NGVRIKTWPAS   G   ++HF DII+ NVSNP++IDQ YCP+N+CN+ + S++K
Sbjct: 262 FTNTDNGVRIKTWPAS-HPGVVNDVHFEDIIVQNVSNPVVIDQVYCPFNKCNKDLPSQVK 321

Query: 405 IRIVSFKNIRGSSATPLAIRLICSRYLPCYDVKVSNIDLTYNGIKGSISSQCTNM 460
           I  VSF+NI+G+S T  A+ L+ S+ +PC  ++V +ID+TY+G +G   S C N+
Sbjct: 322 ISKVSFQNIKGTSRTQDAVSLLRSKGVPCEGIEVGDIDITYSGKEGPAKSSCENI 375

[Close]
BLAST of CmaCh17G005350 vs. Swiss-Prot
Match: PGLR_BRANA (Polygalacturonase OS=Brassica napus PE=2 SV=1)

HSP 1 Score: 278.5 bits (711), Expect = 1.5e-73
Identity = 129/234 (55.13%), Postives = 173/234 (73.93%), Query Frame = 1 

Query: 226 SLRFNFITNSTVKGITSLDSKNFHINVLGCNNLTFHNINIIAPKNSPNTDGIHISRSNKI 285
           S+RF+F+ N+ +K +TSLD+KNFH NV+   N+TF NI IIAP  SPNTDGIH+ R   +
Sbjct: 140 SVRFDFVDNAEIKDVTSLDAKNFHFNVISGKNMTFDNIKIIAPAESPNTDGIHLGRCEGV 199

Query: 286 TITKFKIAIGDECISLGDGSKLIEVTNVTCGPGHGISIGSLGRYTNEEPVEGVTVKNCTL 345
            I   KIA GD+CIS+GDG K + +  V CGPGHGIS+GSLGRY  E+ V  +TVKNCTL
Sbjct: 200 KILNTKIATGDDCISVGDGMKNLLIEKVVCGPGHGISVGSLGRYGWEQDVTDITVKNCTL 259

Query: 346 INTTNGVRIKTWPASAASGTATNMHFLDIIMVNVSNPILIDQEYCPWNQCNRQILSKIKI 405
             T+NG+RIKTWP++A + TA  +HF DII+  VSNPILIDQEYCPWNQCN+   S IK+
Sbjct: 260 EGTSNGLRIKTWPSAACTTTAAGIHFEDIILNKVSNPILIDQEYCPWNQCNKNKPSTIKL 319

Query: 406 RIVSFKNIRGSSATPLAIRLICSRYLPCYDVKVSNIDLTYNGIKGSISSQCTNM 460
             ++F+NIRG+S    A++L+CS+  PC +V++ +I++ Y G  G  + +CTN+
Sbjct: 320 VDITFRNIRGTSENKDAVKLLCSKGHPCENVEIGDINIEYTGPDGPPTFECTNV 373

[Close]
BLAST of CmaCh17G005350 vs. Swiss-Prot
Match: PGLR_GOSBA (Polygalacturonase OS=Gossypium barbadense GN=G9 PE=2 SV=1)

HSP 1 Score: 273.9 bits (699), Expect = 3.7e-72
Identity = 126/234 (53.85%), Postives = 172/234 (73.50%), Query Frame = 1 

Query: 226 SLRFNFITNSTVKGITSLDSKNFHINVLGCNNLTFHNINIIAPKNSPNTDGIHISRSNKI 285
           ++RF+F+TN+ ++ ITS DSK FHINV  C N+T   + I AP  SPNTDGIH+ +S  +
Sbjct: 151 NIRFDFVTNALIQDITSKDSKLFHINVFACKNITLERLKIEAPDESPNTDGIHMGKSEGV 210

Query: 286 TITKFKIAIGDECISLGDGSKLIEVTNVTCGPGHGISIGSLGRYTNEEPVEGVTVKNCTL 345
            I    I  GD+CIS+GDG+K + +  +TCGPGHGISIGSLG++ NEEPVEG+ + NCT+
Sbjct: 211 NIIASDIKTGDDCISIGDGTKNMVIKEITCGPGHGISIGSLGKFQNEEPVEGIKISNCTI 270

Query: 346 INTTNGVRIKTWPASAASGTATNMHFLDIIMVNVSNPILIDQEYCPWNQCNRQILSKIKI 405
            NT+NG RIKTWP     G  + +HF DI M NVS+PILIDQ+YCPWN+C +   SK+K+
Sbjct: 271 TNTSNGARIKTWPGE-HGGAVSEIHFEDITMNNVSSPILIDQQYCPWNKCKKNEESKVKL 330

Query: 406 RIVSFKNIRGSSATPLAIRLICSRYLPCYDVKVSNIDLTYNGIKGSISSQCTNM 460
             +SFKNIRG+SA P AI+ ICS   PC +V++++ID+ +NG + + +SQC N+
Sbjct: 331 SNISFKNIRGTSALPEAIKFICSGSSPCQNVELADIDIQHNGAEPA-TSQCLNV 382

[Close]
BLAST of CmaCh17G005350 vs. TrEMBL
Match: A5BHW8_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_002009 PE=3 SV=1)

HSP 1 Score: 414.8 bits (1065), Expect = 1.5e-112
Identity = 229/497 (46.08%), Postives = 301/497 (60.56%), Query Frame = 1 

Query: 21   GCNNLTFHNINIIAPENNPNIDGIHIGRSNKITLTKSKIPTGDDCISLGDGSKLIEVTNV 80
            G  NL    + I A  ++ N DGIH+GRS  + ++ + I TGDD +S+GDGS+ I V  V
Sbjct: 764  GTCNLLLVYVTINATGDSLNTDGIHMGRSTGVNISDAIIKTGDDSLSIGDGSQHINVEKV 823

Query: 81   TCGPGHGISIESLGRYTNEEPVEGVTVKNCTLINTTNGVRIKTWPASAASGTATNMHFLD 140
            TCGPGHGIS+ SLG+Y NEEPV GVTVKNCTLINT NG+R+KTWP S AS  AT++HF D
Sbjct: 824  TCGPGHGISVGSLGKYHNEEPVVGVTVKNCTLINTMNGIRVKTWPDSPAS-VATDLHFED 883

Query: 141  IIMVNVSNPILIDQEYCSWNQCNRQILSKIKIRIVSFKNIRGSSATPLAIRLICSRYLPC 200
            IIM NV NPILI+QEYC ++QC  + L               + A+P+  R++    +P 
Sbjct: 884  IIMNNVGNPILINQEYCPYDQCQAKAL---------LTAWEAACASPIVSRVV----IPA 943

Query: 201  YDVKVSNIDLTYNG---------IKGSISSQCTNS--------LRFNFITNSTVKGITSL 260
                +  +  T  G         +KG++ +    S        + F  +   T+ G    
Sbjct: 944  GIYALGQV--TIEGPCKAPINLIVKGTVRAPVDTSRFKPQAGWVAFQHLDQFTLSGYGVF 1003

Query: 261  DSK------------------------NFHINV-----------------LGCNNLTFHN 320
            D +                        NF  N                  LGC N+TF  
Sbjct: 1004 DGQGQSVWGQKCSRTKYCHQLPINLRFNFLTNSIIKDITSKDSKQFHINVLGCRNITFFQ 1063

Query: 321  INIIAPKNSPNTDGIHISRSNKITITKFKIAIGDECISLGDGSKLIEVTNVTCGPGHGIS 380
            + I AP++S NTDGIHI RS  + IT   I  GD+C+S+GDGS+ I++T V CGPGHGIS
Sbjct: 1064 VAITAPEDSQNTDGIHIGRSRGVNITHSTIQTGDDCVSIGDGSEQIDITKVNCGPGHGIS 1123

Query: 381  IGSLGRYTNEEPVEGVTVKNCTLINTTNGVRIKTWPASAASGTATNMHFLDIIMVNVSNP 440
            +GSLG Y NE PV G+ VKNCTL +TTNGVR+KT+P S+  GTAT MHF DI+M NVSNP
Sbjct: 1124 VGSLGLYKNEAPVIGIRVKNCTLSDTTNGVRVKTYP-SSPQGTATEMHFHDIVMNNVSNP 1183

Query: 441  ILIDQEYCPWNQCNRQILSKIKIRIVSFKNIRGSSATPLAIRLICSRYLPCYDVKVSNID 460
            I+IDQEYCP NQCN Q+ S++K+  +SFKNIRG+++T LA+ L+CS+  PC  V++ NID
Sbjct: 1184 IIIDQEYCPHNQCNLQVPSRVKLSNISFKNIRGTTSTELAVNLVCSKGAPCQKVELGNID 1243

[Close]
BLAST of CmaCh17G005350 vs. TrEMBL
Match: A0A068UKK9_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00026876001 PE=3 SV=1)

HSP 1 Score: 381.7 bits (979), Expect = 1.4e-102
Identity = 207/455 (45.49%), Postives = 286/455 (62.86%), Query Frame = 1 

Query: 6   GITSLDSKNFHINVLGCNNLTFHNINIIAPENNPNIDGIHIGRSNKITLTKSKIPTGDDC 65
           G++SL+S+ FHIN+ GC N     + I APEN+PN DGIH+  S+ + +T S I TGDDC
Sbjct: 59  GLSSLNSQFFHINLDGCQNTRLEGVKISAPENSPNTDGIHVQSSSGVAITNSHIGTGDDC 118

Query: 66  ISLGDGSKLIEVTNVTCGPGHGISIESLGRYTNEEPVEGVTVKNCTLINTTNGVRIKTWP 125
           ISLG GS  I + N+ CGPGHGISI SLG    E  V+ VTVK  TL  T NG+RIKTWP
Sbjct: 119 ISLGPGSSNIWIENINCGPGHGISIGSLGSNLQEPGVKNVTVKTVTLSGTQNGLRIKTWP 178

Query: 126 ASAASGTATNMHFLDIIMVNVSNPILIDQEYC-SWNQCNRQILSKIKIRIVSFKNIRGSS 185
              ++G  T + F   +MVNV NPI+IDQ YC +  +C  Q  S ++I  V+++++ G+S
Sbjct: 179 -MPSNGFVTGVLFQHAVMVNVKNPIIIDQNYCPNRAKCLGQ-ASGVRISDVTYQDVHGTS 238

Query: 186 ATPLAIRLICSRYLPCYDVKVSNIDLTYNGIKGSISSQCTNSLRFNFITNSTVKGITSLD 245
           AT +A+   CS+  PC  + + +++L+Y     + S     SL F    N  V G++SL+
Sbjct: 239 ATEVAVNFYCSKKYPCSRIILEDVNLSYKDRPATASC----SLGFYNSNNVLVSGLSSLN 298

Query: 246 SKNFHINVLGCNNLTFHNINIIAPKNSPNTDGIHISRSNKITITKFKIAIGDECISLGDG 305
           S+ FHI + GC N     + I AP+NSPNTDGIH+  S+ + IT   I  GD+CISLG G
Sbjct: 299 SQIFHIILDGCKNTRLEGVKISAPENSPNTDGIHVQSSSGVAITNSHIGTGDDCISLGPG 358

Query: 306 SKLIEVTNVTCGPGHGISIGSLGRYTNEEPVEGVTVKNCTLINTTNGVRIKTWPASAASG 365
           S  I + N+ CGPGHGISIGSLG    E  V+ VTVK  TL  T NG+RIKTW A  ++G
Sbjct: 359 SSNIWIENINCGPGHGISIGSLGSNLQEPGVKNVTVKTVTLSGTQNGLRIKTW-AMPSNG 418

Query: 366 TATNMHFLDIIMVNVSNPILIDQEYCPWN-QCNRQILSKIKIRIVSFKNIRGSSATPLAI 425
             T + F   +MVNV NPI+IDQ YCP   +C  Q  S ++I  V+++++ G+SAT +A+
Sbjct: 419 FVTGVLFQHAVMVNVQNPIIIDQNYCPNRAKCPGQ-ASGVRISDVTYQDVHGTSATEVAV 478

Query: 426 RLICSRYLPCYDVKVSNIDLTYNGIKGSISSQCTN 459
              CS+  PC  + + +++L+Y     + S  C N
Sbjct: 479 NFYCSKKYPCSRIILEDVNLSYKDRPATAS--CVN 503

[Close]
BLAST of CmaCh17G005350 vs. TrEMBL
Match: A0A0A0K3B7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G037910 PE=3 SV=1)

HSP 1 Score: 380.2 bits (975), Expect = 4.1e-102
Identity = 182/234 (77.78%), Postives = 204/234 (87.18%), Query Frame = 1 

Query: 226 SLRFNFITNSTVKGITSLDSKNFHINVLGCNNLTFHNINIIAPKNSPNTDGIHISRSNKI 285
           SLRF+FITNS V+ ITSLDSKNFH+N+LGCNNLTF  +NIIAP+NSPNTDGIHI RS  I
Sbjct: 149 SLRFDFITNSIVRRITSLDSKNFHVNILGCNNLTFQGVNIIAPENSPNTDGIHIGRSIGI 208

Query: 286 TITKFKIAIGDECISLGDGSKLIEVTNVTCGPGHGISIGSLGRYTNEEPVEGVTVKNCTL 345
           +I K +IA GD+CISLGDGSK I+V NV CGPGHGISIGSLG+Y NEEPVEGV V NCT+
Sbjct: 209 SILKSRIATGDDCISLGDGSKRIKVNNVICGPGHGISIGSLGKYNNEEPVEGVIVNNCTI 268

Query: 346 INTTNGVRIKTWPASAASGTATNMHFLDIIMVNVSNPILIDQEYCPWNQCNRQILSKIKI 405
           INTTNGVRIKTWPAS  +G ATNMHF DI MVNVSNPILIDQEYCPWNQCNR+I S IKI
Sbjct: 269 INTTNGVRIKTWPASPVAGIATNMHFSDITMVNVSNPILIDQEYCPWNQCNREIPSNIKI 328

Query: 406 RIVSFKNIRGSSATPLAIRLICSRYLPCYDVKVSNIDLTYNGIKGSISSQCTNM 460
             VSFKNIRGSSATP+A++LICS  LPC +VKV+NIDL YNGIKGSI+S+C N+
Sbjct: 329 NKVSFKNIRGSSATPVAVKLICSSNLPCEEVKVANIDLVYNGIKGSITSECMNV 382

[Close]
BLAST of CmaCh17G005350 vs. TrEMBL
Match: F6H559_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_12s0028g01270 PE=3 SV=1)

HSP 1 Score: 315.1 bits (806), Expect = 1.6e-82
Identity = 152/245 (62.04%), Postives = 191/245 (77.96%), Query Frame = 1 

Query: 215 IKGSISSQCTNSLRFNFITNSTVKGITSLDSKNFHINVLGCNNLTFHNINIIAPKNSPNT 274
           +  +  +Q   +LRFNFITNS VK ITS DSK FHIN+LGC NLTF+NI I AP+ S NT
Sbjct: 138 LSSAYCNQLPINLRFNFITNSMVKDITSRDSKQFHINLLGCKNLTFYNIVISAPQESLNT 197

Query: 275 DGIHISRSNKITITKFKIAIGDECISLGDGSKLIEVTNVTCGPGHGISIGSLGRYTNEEP 334
           DGIHI RS+ I IT   I  GD+C+S+GDGS+ I +  VTCGPGHGIS+GSLG+Y NEEP
Sbjct: 198 DGIHIGRSSGINITDSTIETGDDCVSIGDGSEQINIQRVTCGPGHGISVGSLGKYPNEEP 257

Query: 335 VEGVTVKNCTLINTTNGVRIKTWPASAASGTATNMHFLDIIMVNVSNPILIDQEYCPWNQ 394
           V G++VKNCTL NT NGVR+KTWPAS   GTA+ MHF DI+M NV NPI+IDQEYCP NQ
Sbjct: 258 VVGISVKNCTLTNTQNGVRVKTWPAS-HQGTASEMHFEDIVMNNVGNPIIIDQEYCPHNQ 317

Query: 395 CNRQILSKIKIRIVSFKNIRGSSATPLAIRLICSRYLPCYDVKVSNIDLTYNGIKGSISS 454
           CN +  S+IKI  VSF+NIRG+++T +A++LICS+ +PC+DV++ +I+L YNG +G   S
Sbjct: 318 CNLKSPSRIKISNVSFRNIRGTTSTQVAVKLICSQGVPCHDVELGDINLEYNGNEGPAMS 377

Query: 455 QCTNM 460
           QC N+
Sbjct: 378 QCKNI 381

[Close]
BLAST of CmaCh17G005350 vs. TrEMBL
Match: E0CTY4_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_12s0028g01290 PE=3 SV=1)

HSP 1 Score: 313.2 bits (801), Expect = 6.1e-82
Identity = 152/245 (62.04%), Postives = 189/245 (77.14%), Query Frame = 1 

Query: 215 IKGSISSQCTNSLRFNFITNSTVKGITSLDSKNFHINVLGCNNLTFHNINIIAPKNSPNT 274
           +  S  +Q   +LRFNFITNS VK ITS DSK FHIN+LGC NLTF+N+ I AP+ S NT
Sbjct: 138 LSSSYCNQLPINLRFNFITNSMVKDITSRDSKQFHINLLGCKNLTFYNVVISAPQESLNT 197

Query: 275 DGIHISRSNKITITKFKIAIGDECISLGDGSKLIEVTNVTCGPGHGISIGSLGRYTNEEP 334
           DGIHI RS+ I IT   I  GD+C+S+GDGS+ I +  VTCGPGHGIS+GSLG+Y NEEP
Sbjct: 198 DGIHIGRSSGINITDSTIETGDDCVSIGDGSEQINIQRVTCGPGHGISVGSLGKYPNEEP 257

Query: 335 VEGVTVKNCTLINTTNGVRIKTWPASAASGTATNMHFLDIIMVNVSNPILIDQEYCPWNQ 394
           V G++VKNCTL NT NGVR+KTWPAS   GTA+ MHF DI+M NV NPI+IDQEYCP NQ
Sbjct: 258 VVGISVKNCTLTNTQNGVRVKTWPAS-HQGTASEMHFEDIVMNNVGNPIIIDQEYCPHNQ 317

Query: 395 CNRQILSKIKIRIVSFKNIRGSSATPLAIRLICSRYLPCYDVKVSNIDLTYNGIKGSISS 454
           CN +  S+IKI  VSF+NIRG+++T +A++LICS+  PC DV++ +I+L YNG +G   S
Sbjct: 318 CNLKSPSRIKISNVSFRNIRGTTSTQVAVKLICSQGEPCQDVELGDINLEYNGNEGPAMS 377

Query: 455 QCTNM 460
           QC N+
Sbjct: 378 QCKNI 381

[Close]
BLAST of CmaCh17G005350 vs. TAIR10
Match: AT3G07820.1 (AT3G07820.1 Pectin lyase-like superfamily protein)

HSP 1 Score: 295.4 bits (755), Expect = 6.7e-80
Identity = 135/234 (57.69%), Postives = 182/234 (77.78%), Query Frame = 1 

Query: 226 SLRFNFITNSTVKGITSLDSKNFHINVLGCNNLTFHNINIIAPKNSPNTDGIHISRSNKI 285
           S+RF+FI NS ++ I+S+D+KNFHINVLG  N+T +NI I+AP++SPNTDGIH+ RS+ +
Sbjct: 140 SIRFDFILNSEIRDISSIDAKNFHINVLGAKNMTMNNIKIVAPEDSPNTDGIHLGRSDGV 199

Query: 286 TITKFKIAIGDECISLGDGSKLIEVTNVTCGPGHGISIGSLGRYTNEEPVEGVTVKNCTL 345
            I    I+ GD+CIS+GDG K + V  VTCGPGHGIS+GSLGRY +E+ V G+ V NCTL
Sbjct: 200 KILNSFISTGDDCISVGDGMKNLHVEKVTCGPGHGISVGSLGRYGHEQDVSGIKVINCTL 259

Query: 346 INTTNGVRIKTWPASAASGTATNMHFLDIIMVNVSNPILIDQEYCPWNQCNRQILSKIKI 405
             T NG+RIKTWP++A S TA+++HF DII+ +VSNPILIDQEYCPWNQCN+Q  S IK+
Sbjct: 260 QETDNGLRIKTWPSAACSTTASDIHFEDIILKDVSNPILIDQEYCPWNQCNKQKASTIKL 319

Query: 406 RIVSFKNIRGSSATPLAIRLICSRYLPCYDVKVSNIDLTYNGIKGSISSQCTNM 460
             +SFKNIRG+S    A++L+CS+  PC +V++ +ID+ YNG  G  +  C+N+
Sbjct: 320 VNISFKNIRGTSGNKDAVKLLCSKGYPCQNVEIGDIDIKYNGADGPATFHCSNV 373

[Close]
BLAST of CmaCh17G005350 vs. TAIR10
Match: AT3G07840.1 (AT3G07840.1 Pectin lyase-like superfamily protein)

HSP 1 Score: 295.0 bits (754), Expect = 8.7e-80
Identity = 135/234 (57.69%), Postives = 179/234 (76.50%), Query Frame = 1 

Query: 226 SLRFNFITNSTVKGITSLDSKNFHINVLGCNNLTFHNINIIAPKNSPNTDGIHISRSNKI 285
           S+RF+F+ N+ ++ I+S+D+KNFHINVLG  N+TF N+ +IAP  SPNTDGIH+ RS  +
Sbjct: 141 SIRFDFVENAEIRDISSIDAKNFHINVLGAKNMTFDNVKVIAPAESPNTDGIHLGRSEGV 200

Query: 286 TITKFKIAIGDECISLGDGSKLIEVTNVTCGPGHGISIGSLGRYTNEEPVEGVTVKNCTL 345
            I   KIA GD+CIS+GDG K + V NV CGPGHGIS+GSLGRY +E+ V G+TV NCTL
Sbjct: 201 KILNSKIATGDDCISVGDGMKNLHVENVMCGPGHGISVGSLGRYVHEQDVTGITVVNCTL 260

Query: 346 INTTNGVRIKTWPASAASGTATNMHFLDIIMVNVSNPILIDQEYCPWNQCNRQILSKIKI 405
             T NG+RIKTWP++A + TA+ +HF +II+ NVSNPILIDQEYCPWNQCN+Q  S IK+
Sbjct: 261 QGTDNGLRIKTWPSAACATTASGIHFENIILNNVSNPILIDQEYCPWNQCNKQKPSTIKL 320

Query: 406 RIVSFKNIRGSSATPLAIRLICSRYLPCYDVKVSNIDLTYNGIKGSISSQCTNM 460
             +SFKNIRG+S    A++L+CS+  PC +V++ NI+L Y G  G  +  C+N+
Sbjct: 321 VDISFKNIRGTSGNKDAVKLLCSKAHPCANVEIGNINLEYKGADGPPTFMCSNV 374

[Close]
BLAST of CmaCh17G005350 vs. TAIR10
Match: AT5G48140.1 (AT5G48140.1 Pectin lyase-like superfamily protein)

HSP 1 Score: 291.6 bits (745), Expect = 9.6e-79
Identity = 137/256 (53.52%), Postives = 191/256 (74.61%), Query Frame = 1 

Query: 204 KVSNIDLTYNGIKGSISSQCTNSLRFNFITNSTVKGITSLDSKNFHINVLGCNNLTFHNI 263
           +V+N   T+N  K  IS      +RF+F+T++ ++GITSLD+K+FHINV+G  N+TF ++
Sbjct: 124 RVNNCHKTFNCKKLPIS------IRFDFVTDAKIRGITSLDAKHFHINVIGAKNVTFEDV 183

Query: 264 NIIAPKNSPNTDGIHISRSNKITITKFKIAIGDECISLGDGSKLIEVTNVTCGPGHGISI 323
            IIAP  SPNTDGIH+ RS+ I I    I+ GD+C+S+GDG K + V  VTCGPGHGISI
Sbjct: 184 KIIAPAESPNTDGIHVGRSDGIKIINSFISTGDDCVSVGDGMKNLLVERVTCGPGHGISI 243

Query: 324 GSLGRYTNEEPVEGVTVKNCTLINTTNGVRIKTWPASAASGTATNMHFLDIIMVNVSNPI 383
           GSLGRY++EE V G+ + NCTL  T NG+RIKTWP++A + TA+++HF +I++ NVSNPI
Sbjct: 244 GSLGRYSHEENVSGIKIINCTLQETDNGLRIKTWPSAACTTTASDIHFENILLKNVSNPI 303

Query: 384 LIDQEYCPWNQCNRQILSKIKIRIVSFKNIRGSSATPLAIRLICSRYLPCYDVKVSNIDL 443
           LIDQEYCPWNQCN+Q  S IK+  +SFK IRG+S    A++L+CS+  PC +V+V ++++
Sbjct: 304 LIDQEYCPWNQCNKQKPSTIKLANISFKKIRGTSGNKDAVKLLCSKGYPCQNVEVGDVNI 363

Query: 444 TYNGIKGSISSQCTNM 460
            Y G  G  + QC+N+
Sbjct: 364 QYTGADGPATFQCSNV 373

[Close]
BLAST of CmaCh17G005350 vs. TAIR10
Match: AT3G07830.1 (AT3G07830.1 Pectin lyase-like superfamily protein)

HSP 1 Score: 286.6 bits (732), Expect = 3.1e-77
Identity = 129/234 (55.13%), Postives = 179/234 (76.50%), Query Frame = 1 

Query: 226 SLRFNFITNSTVKGITSLDSKNFHINVLGCNNLTFHNINIIAPKNSPNTDGIHISRSNKI 285
           S+RF+F+TN+ ++ I+S+D+KNFHINV+G  N+TF N+ I+AP  SPNTDGIH+ RS  +
Sbjct: 141 SIRFDFVTNAEIRDISSIDAKNFHINVIGAKNMTFDNVKIMAPAESPNTDGIHLGRSVGV 200

Query: 286 TITKFKIAIGDECISLGDGSKLIEVTNVTCGPGHGISIGSLGRYTNEEPVEGVTVKNCTL 345
           +I   +I+ GD+C+S+GDG   + V NV CGPGHGIS+GSLGRY +E+ V G+ V NCTL
Sbjct: 201 SIINSRISTGDDCVSVGDGMVNLLVKNVVCGPGHGISVGSLGRYGHEQDVSGIRVINCTL 260

Query: 346 INTTNGVRIKTWPASAASGTATNMHFLDIIMVNVSNPILIDQEYCPWNQCNRQILSKIKI 405
             T NG+RIKTWP++A S TA+N+HF +II+ NVSNPILIDQEYCPWNQCN+Q  S IK+
Sbjct: 261 QETDNGLRIKTWPSAACSTTASNIHFENIILRNVSNPILIDQEYCPWNQCNKQKSSSIKL 320

Query: 406 RIVSFKNIRGSSATPLAIRLICSRYLPCYDVKVSNIDLTYNGIKGSISSQCTNM 460
             +SF+ IRG+S    A++L+CS+  PC +V+V +I++ Y G  G  +  C+N+
Sbjct: 321 ANISFRRIRGTSGNKDAVKLLCSKGYPCENVQVGDINIQYTGADGPATFMCSNV 374

[Close]
BLAST of CmaCh17G005350 vs. TAIR10
Match: AT3G14040.1 (AT3G14040.1 Pectin lyase-like superfamily protein)

HSP 1 Score: 264.6 bits (675), Expect = 1.3e-70
Identity = 126/234 (53.85%), Postives = 172/234 (73.50%), Query Frame = 1 

Query: 226 SLRFNFITNSTVKGITSLDSKNFHINVLGCNNLTFHNINIIAPKNSPNTDGIHISRSNKI 285
           ++RF  +TNS +  ITS +SK FH+N+L C N+T  +I I AP  S NTDGIHI RSN +
Sbjct: 192 NIRFTGLTNSKINSITSTNSKLFHMNILNCKNITLTDIGIDAPPESLNTDGIHIGRSNGV 251

Query: 286 TITKFKIAIGDECISLGDGSKLIEVTNVTCGPGHGISIGSLGRYTNEEPVEGVTVKNCTL 345
            +   KI  GD+C+S+GDG++ + V NV CGPGHGISIGSLGRY NE+PV+GVTV+ C +
Sbjct: 252 NLIGAKIKTGDDCVSIGDGTENLIVENVECGPGHGISIGSLGRYPNEQPVKGVTVRKCLI 311

Query: 346 INTTNGVRIKTWPASAASGTATNMHFLDIIMVNVSNPILIDQEYCPWNQCNRQILSKIKI 405
            NT NGVRIKTWP S   G A+N+ F DI M NVS P+LIDQEYCP+  C   + SK+K+
Sbjct: 312 KNTDNGVRIKTWPGS-PPGIASNILFEDITMDNVSLPVLIDQEYCPYGHCKAGVPSKVKL 371

Query: 406 RIVSFKNIRGSSATPLAIRLICSRYLPCYDVKVSNIDLTYNGIKGSISSQCTNM 460
             V+ KNI+G+SAT +A++L+CS+ +PC ++ +S+I+L +NG +G   S C+N+
Sbjct: 372 SDVTIKNIKGTSATKVAVKLMCSKGVPCTNIALSDINLVHNGKEGPAVSACSNI 424

[Close]
BLAST of CmaCh17G005350 vs. NCBI nr
Match: gi|147835149|emb|CAN65674.1| (hypothetical protein VITISV_002009 [Vitis vinifera])

HSP 1 Score: 414.8 bits (1065), Expect = 2.1e-112
Identity = 229/497 (46.08%), Postives = 301/497 (60.56%), Query Frame = 1 

Query: 21   GCNNLTFHNINIIAPENNPNIDGIHIGRSNKITLTKSKIPTGDDCISLGDGSKLIEVTNV 80
            G  NL    + I A  ++ N DGIH+GRS  + ++ + I TGDD +S+GDGS+ I V  V
Sbjct: 764  GTCNLLLVYVTINATGDSLNTDGIHMGRSTGVNISDAIIKTGDDSLSIGDGSQHINVEKV 823

Query: 81   TCGPGHGISIESLGRYTNEEPVEGVTVKNCTLINTTNGVRIKTWPASAASGTATNMHFLD 140
            TCGPGHGIS+ SLG+Y NEEPV GVTVKNCTLINT NG+R+KTWP S AS  AT++HF D
Sbjct: 824  TCGPGHGISVGSLGKYHNEEPVVGVTVKNCTLINTMNGIRVKTWPDSPAS-VATDLHFED 883

Query: 141  IIMVNVSNPILIDQEYCSWNQCNRQILSKIKIRIVSFKNIRGSSATPLAIRLICSRYLPC 200
            IIM NV NPILI+QEYC ++QC  + L               + A+P+  R++    +P 
Sbjct: 884  IIMNNVGNPILINQEYCPYDQCQAKAL---------LTAWEAACASPIVSRVV----IPA 943

Query: 201  YDVKVSNIDLTYNG---------IKGSISSQCTNS--------LRFNFITNSTVKGITSL 260
                +  +  T  G         +KG++ +    S        + F  +   T+ G    
Sbjct: 944  GIYALGQV--TIEGPCKAPINLIVKGTVRAPVDTSRFKPQAGWVAFQHLDQFTLSGYGVF 1003

Query: 261  DSK------------------------NFHINV-----------------LGCNNLTFHN 320
            D +                        NF  N                  LGC N+TF  
Sbjct: 1004 DGQGQSVWGQKCSRTKYCHQLPINLRFNFLTNSIIKDITSKDSKQFHINVLGCRNITFFQ 1063

Query: 321  INIIAPKNSPNTDGIHISRSNKITITKFKIAIGDECISLGDGSKLIEVTNVTCGPGHGIS 380
            + I AP++S NTDGIHI RS  + IT   I  GD+C+S+GDGS+ I++T V CGPGHGIS
Sbjct: 1064 VAITAPEDSQNTDGIHIGRSRGVNITHSTIQTGDDCVSIGDGSEQIDITKVNCGPGHGIS 1123

Query: 381  IGSLGRYTNEEPVEGVTVKNCTLINTTNGVRIKTWPASAASGTATNMHFLDIIMVNVSNP 440
            +GSLG Y NE PV G+ VKNCTL +TTNGVR+KT+P S+  GTAT MHF DI+M NVSNP
Sbjct: 1124 VGSLGLYKNEAPVIGIRVKNCTLSDTTNGVRVKTYP-SSPQGTATEMHFHDIVMNNVSNP 1183

Query: 441  ILIDQEYCPWNQCNRQILSKIKIRIVSFKNIRGSSATPLAIRLICSRYLPCYDVKVSNID 460
            I+IDQEYCP NQCN Q+ S++K+  +SFKNIRG+++T LA+ L+CS+  PC  V++ NID
Sbjct: 1184 IIIDQEYCPHNQCNLQVPSRVKLSNISFKNIRGTTSTELAVNLVCSKGAPCQKVELGNID 1243

[Close]
BLAST of CmaCh17G005350 vs. NCBI nr
Match: gi|659111053|ref|XP_008455553.1| (PREDICTED: exopolygalacturonase-like [Cucumis melo])

HSP 1 Score: 389.0 bits (998), Expect = 1.3e-104
Identity = 184/234 (78.63%), Postives = 210/234 (89.74%), Query Frame = 1 

Query: 226 SLRFNFITNSTVKGITSLDSKNFHINVLGCNNLTFHNINIIAPKNSPNTDGIHISRSNKI 285
           SLRFNFITNS V+ ITSLDSKNFH+N+LGCNNLTF  +NIIAP++SPNTDGIHI RS  I
Sbjct: 150 SLRFNFITNSIVRRITSLDSKNFHVNILGCNNLTFDGVNIIAPEDSPNTDGIHIGRSIGI 209

Query: 286 TITKFKIAIGDECISLGDGSKLIEVTNVTCGPGHGISIGSLGRYTNEEPVEGVTVKNCTL 345
           +I K +IA GD+CISLGDGSK +++TNVTCGPGHGISIGSLG+YTNEEPVEGV VKNCT+
Sbjct: 210 SILKSRIATGDDCISLGDGSKRVKITNVTCGPGHGISIGSLGKYTNEEPVEGVIVKNCTI 269

Query: 346 INTTNGVRIKTWPASAASGTATNMHFLDIIMVNVSNPILIDQEYCPWNQCNRQILSKIKI 405
           +NTTNGVRIKTWPAS  +G ATNMHFLDI MVNVSNPILIDQEYCPWNQCNR+I SKIKI
Sbjct: 270 MNTTNGVRIKTWPASPVAGIATNMHFLDITMVNVSNPILIDQEYCPWNQCNRKIPSKIKI 329

Query: 406 RIVSFKNIRGSSATPLAIRLICSRYLPCYDVKVSNIDLTYNGIKGSISSQCTNM 460
             VSFKNIRGSSATP+A++LICS  LPC +VKV+NIDL YNGIKGS++S+C N+
Sbjct: 330 NKVSFKNIRGSSATPVAVKLICSSNLPCEEVKVANIDLVYNGIKGSLTSECMNV 383

[Close]
BLAST of CmaCh17G005350 vs. NCBI nr
Match: gi|661888405|emb|CDP08138.1| (unnamed protein product [Coffea canephora])

HSP 1 Score: 381.7 bits (979), Expect = 2.0e-102
Identity = 207/455 (45.49%), Postives = 286/455 (62.86%), Query Frame = 1 

Query: 6   GITSLDSKNFHINVLGCNNLTFHNINIIAPENNPNIDGIHIGRSNKITLTKSKIPTGDDC 65
           G++SL+S+ FHIN+ GC N     + I APEN+PN DGIH+  S+ + +T S I TGDDC
Sbjct: 59  GLSSLNSQFFHINLDGCQNTRLEGVKISAPENSPNTDGIHVQSSSGVAITNSHIGTGDDC 118

Query: 66  ISLGDGSKLIEVTNVTCGPGHGISIESLGRYTNEEPVEGVTVKNCTLINTTNGVRIKTWP 125
           ISLG GS  I + N+ CGPGHGISI SLG    E  V+ VTVK  TL  T NG+RIKTWP
Sbjct: 119 ISLGPGSSNIWIENINCGPGHGISIGSLGSNLQEPGVKNVTVKTVTLSGTQNGLRIKTWP 178

Query: 126 ASAASGTATNMHFLDIIMVNVSNPILIDQEYC-SWNQCNRQILSKIKIRIVSFKNIRGSS 185
              ++G  T + F   +MVNV NPI+IDQ YC +  +C  Q  S ++I  V+++++ G+S
Sbjct: 179 -MPSNGFVTGVLFQHAVMVNVKNPIIIDQNYCPNRAKCLGQ-ASGVRISDVTYQDVHGTS 238

Query: 186 ATPLAIRLICSRYLPCYDVKVSNIDLTYNGIKGSISSQCTNSLRFNFITNSTVKGITSLD 245
           AT +A+   CS+  PC  + + +++L+Y     + S     SL F    N  V G++SL+
Sbjct: 239 ATEVAVNFYCSKKYPCSRIILEDVNLSYKDRPATASC----SLGFYNSNNVLVSGLSSLN 298

Query: 246 SKNFHINVLGCNNLTFHNINIIAPKNSPNTDGIHISRSNKITITKFKIAIGDECISLGDG 305
           S+ FHI + GC N     + I AP+NSPNTDGIH+  S+ + IT   I  GD+CISLG G
Sbjct: 299 SQIFHIILDGCKNTRLEGVKISAPENSPNTDGIHVQSSSGVAITNSHIGTGDDCISLGPG 358

Query: 306 SKLIEVTNVTCGPGHGISIGSLGRYTNEEPVEGVTVKNCTLINTTNGVRIKTWPASAASG 365
           S  I + N+ CGPGHGISIGSLG    E  V+ VTVK  TL  T NG+RIKTW A  ++G
Sbjct: 359 SSNIWIENINCGPGHGISIGSLGSNLQEPGVKNVTVKTVTLSGTQNGLRIKTW-AMPSNG 418

Query: 366 TATNMHFLDIIMVNVSNPILIDQEYCPWN-QCNRQILSKIKIRIVSFKNIRGSSATPLAI 425
             T + F   +MVNV NPI+IDQ YCP   +C  Q  S ++I  V+++++ G+SAT +A+
Sbjct: 419 FVTGVLFQHAVMVNVQNPIIIDQNYCPNRAKCPGQ-ASGVRISDVTYQDVHGTSATEVAV 478

Query: 426 RLICSRYLPCYDVKVSNIDLTYNGIKGSISSQCTN 459
              CS+  PC  + + +++L+Y     + S  C N
Sbjct: 479 NFYCSKKYPCSRIILEDVNLSYKDRPATAS--CVN 503

[Close]
BLAST of CmaCh17G005350 vs. NCBI nr
Match: gi|778730103|ref|XP_011659699.1| (PREDICTED: exopolygalacturonase-like [Cucumis sativus])

HSP 1 Score: 380.2 bits (975), Expect = 5.8e-102
Identity = 182/234 (77.78%), Postives = 204/234 (87.18%), Query Frame = 1 

Query: 226 SLRFNFITNSTVKGITSLDSKNFHINVLGCNNLTFHNINIIAPKNSPNTDGIHISRSNKI 285
           SLRF+FITNS V+ ITSLDSKNFH+N+LGCNNLTF  +NIIAP+NSPNTDGIHI RS  I
Sbjct: 134 SLRFDFITNSIVRRITSLDSKNFHVNILGCNNLTFQGVNIIAPENSPNTDGIHIGRSIGI 193

Query: 286 TITKFKIAIGDECISLGDGSKLIEVTNVTCGPGHGISIGSLGRYTNEEPVEGVTVKNCTL 345
           +I K +IA GD+CISLGDGSK I+V NV CGPGHGISIGSLG+Y NEEPVEGV V NCT+
Sbjct: 194 SILKSRIATGDDCISLGDGSKRIKVNNVICGPGHGISIGSLGKYNNEEPVEGVIVNNCTI 253

Query: 346 INTTNGVRIKTWPASAASGTATNMHFLDIIMVNVSNPILIDQEYCPWNQCNRQILSKIKI 405
           INTTNGVRIKTWPAS  +G ATNMHF DI MVNVSNPILIDQEYCPWNQCNR+I S IKI
Sbjct: 254 INTTNGVRIKTWPASPVAGIATNMHFSDITMVNVSNPILIDQEYCPWNQCNREIPSNIKI 313

Query: 406 RIVSFKNIRGSSATPLAIRLICSRYLPCYDVKVSNIDLTYNGIKGSISSQCTNM 460
             VSFKNIRGSSATP+A++LICS  LPC +VKV+NIDL YNGIKGSI+S+C N+
Sbjct: 314 NKVSFKNIRGSSATPVAVKLICSSNLPCEEVKVANIDLVYNGIKGSITSECMNV 367

[Close]
BLAST of CmaCh17G005350 vs. NCBI nr
Match: gi|700188231|gb|KGN43464.1| (hypothetical protein Csa_7G037910 [Cucumis sativus])

HSP 1 Score: 380.2 bits (975), Expect = 5.8e-102
Identity = 182/234 (77.78%), Postives = 204/234 (87.18%), Query Frame = 1 

Query: 226 SLRFNFITNSTVKGITSLDSKNFHINVLGCNNLTFHNINIIAPKNSPNTDGIHISRSNKI 285
           SLRF+FITNS V+ ITSLDSKNFH+N+LGCNNLTF  +NIIAP+NSPNTDGIHI RS  I
Sbjct: 149 SLRFDFITNSIVRRITSLDSKNFHVNILGCNNLTFQGVNIIAPENSPNTDGIHIGRSIGI 208

Query: 286 TITKFKIAIGDECISLGDGSKLIEVTNVTCGPGHGISIGSLGRYTNEEPVEGVTVKNCTL 345
           +I K +IA GD+CISLGDGSK I+V NV CGPGHGISIGSLG+Y NEEPVEGV V NCT+
Sbjct: 209 SILKSRIATGDDCISLGDGSKRIKVNNVICGPGHGISIGSLGKYNNEEPVEGVIVNNCTI 268

Query: 346 INTTNGVRIKTWPASAASGTATNMHFLDIIMVNVSNPILIDQEYCPWNQCNRQILSKIKI 405
           INTTNGVRIKTWPAS  +G ATNMHF DI MVNVSNPILIDQEYCPWNQCNR+I S IKI
Sbjct: 269 INTTNGVRIKTWPASPVAGIATNMHFSDITMVNVSNPILIDQEYCPWNQCNREIPSNIKI 328

Query: 406 RIVSFKNIRGSSATPLAIRLICSRYLPCYDVKVSNIDLTYNGIKGSISSQCTNM 460
             VSFKNIRGSSATP+A++LICS  LPC +VKV+NIDL YNGIKGSI+S+C N+
Sbjct: 329 NKVSFKNIRGSSATPVAVKLICSSNLPCEEVKVANIDLVYNGIKGSITSECMNV 382

The following BLAST results are available for this feature:
BLAST of CmaCh17G005350 vs. Swiss-Prot
Match NameE-valueIdentityDescription
PGLR_OENOR1.4e-7455.14Exopolygalacturonase (Fragment) OS=Oenothera organensis PE=2 SV=1[more]
PGLR_MEDSA8.8e-7454.98Polygalacturonase OS=Medicago sativa PE=2 SV=1[more]
PGLR_TOBAC1.5e-7355.74Polygalacturonase OS=Nicotiana tabacum GN=PG1 PE=2 SV=1[more]
PGLR_BRANA1.5e-7355.13Polygalacturonase OS=Brassica napus PE=2 SV=1[more]
PGLR_GOSBA3.7e-7253.85Polygalacturonase OS=Gossypium barbadense GN=G9 PE=2 SV=1[more]
BLAST of CmaCh17G005350 vs. TrEMBL
Match NameE-valueIdentityDescription
A5BHW8_VITVI1.5e-11246.08Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_002009 PE=3 SV=1[more]
A0A068UKK9_COFCA1.4e-10245.49Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00026876001 PE=3 SV=1[more]
A0A0A0K3B7_CUCSA4.1e-10277.78Uncharacterized protein OS=Cucumis sativus GN=Csa_7G037910 PE=3 SV=1[more]
F6H559_VITVI1.6e-8262.04Putative uncharacterized protein OS=Vitis vinifera GN=VIT_12s0028g01270 PE=3 SV=... [more]
E0CTY4_VITVI6.1e-8262.04Putative uncharacterized protein OS=Vitis vinifera GN=VIT_12s0028g01290 PE=3 SV=... [more]
BLAST of CmaCh17G005350 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G07820.16.7e-8057.69 Pectin lyase-like superfamily protein[more]
AT3G07840.18.7e-8057.69 Pectin lyase-like superfamily protein[more]
AT5G48140.19.6e-7953.52 Pectin lyase-like superfamily protein[more]
AT3G07830.13.1e-7755.13 Pectin lyase-like superfamily protein[more]
AT3G14040.11.3e-7053.85 Pectin lyase-like superfamily protein[more]
BLAST of CmaCh17G005350 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|147835149|emb|CAN65674.1|2.1e-11246.08hypothetical protein VITISV_002009 [Vitis vinifera][more]
gi|659111053|ref|XP_008455553.1|1.3e-10478.63PREDICTED: exopolygalacturonase-like [Cucumis melo][more]
gi|661888405|emb|CDP08138.1|2.0e-10245.49unnamed protein product [Coffea canephora][more]
gi|778730103|ref|XP_011659699.1|5.8e-10277.78PREDICTED: exopolygalacturonase-like [Cucumis sativus][more]
gi|700188231|gb|KGN43464.1|5.8e-10277.78hypothetical protein Csa_7G037910 [Cucumis sativus][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR000743Glyco_hydro_28
IPR006626PbH1
IPR011050Pectin_lyase_fold/virulence
IPR012334Pectin_lyas_fold
Vocabulary: Molecular Function
TermDefinition
GO:0004650polygalacturonase activity
Vocabulary: Biological Process
TermDefinition
GO:0005975carbohydrate metabolic process
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0071555 cell wall organization
biological_process GO:0005982 starch metabolic process
biological_process GO:0005985 sucrose metabolic process
biological_process GO:0005975 carbohydrate metabolic process
cellular_component GO:0005576 extracellular region
molecular_function GO:0004650 polygalacturonase activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh17G005350.1CmaCh17G005350.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000743Glycoside hydrolase, family 28PFAMPF00295Glyco_hydro_28coord: 225..459
score: 2.5
IPR000743Glycoside hydrolase, family 28PROSITEPS00502POLYGALACTURONASEcoord: 312..325
scor
IPR006626Parallel beta-helix repeatSMARTSM00710pbh1coord: 335..356
score: 0.31coord: 255..281
score: 37.0coord: 433..456
score: 7800.0coord: 22..48
score: 200.0coord: 102..123
score: 0.31coord: 200..223
score: 78
IPR011050Pectin lyase fold/virulence factorunknownSSF51126Pectin lyase-likecoord: 226..466
score: 4.19E-74coord: 6..225
score: 1.11
IPR012334Pectin lyase foldGENE3DG3DSA:2.160.20.10coord: 6..225
score: 2.5E-69coord: 226..461
score: 4.4
NoneNo IPR availablePANTHERPTHR31375FAMILY NOT NAMEDcoord: 226..459
score: 4.8E
NoneNo IPR availablePANTHERPTHR31375:SF37PECTIN LYASE-LIKE SUPERFAMILY PROTEIN-RELATEDcoord: 226..459
score: 4.8E

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CmaCh17G005350Cucumber (Chinese Long) v3cmacucB0445
CmaCh17G005350Watermelon (97103) v2cmawmbB377
CmaCh17G005350Wax gourdcmawgoB0457
CmaCh17G005350Cucurbita maxima (Rimu)cmacmaB386
CmaCh17G005350Cucurbita maxima (Rimu)cmacmaB375
CmaCh17G005350Cucumber (Gy14) v1cgycmaB0296
CmaCh17G005350Cucurbita moschata (Rifu)cmacmoB353
CmaCh17G005350Cucurbita moschata (Rifu)cmacmoB368
CmaCh17G005350Cucurbita moschata (Rifu)cmacmoB378
CmaCh17G005350Wild cucumber (PI 183967)cmacpiB376
CmaCh17G005350Cucumber (Chinese Long) v2cmacuB372
CmaCh17G005350Melon (DHL92) v3.5.1cmameB313
CmaCh17G005350Watermelon (Charleston Gray)cmawcgB328
CmaCh17G005350Watermelon (97103) v1cmawmB351
CmaCh17G005350Cucurbita pepo (Zucchini)cmacpeB390
CmaCh17G005350Cucurbita pepo (Zucchini)cmacpeB371
CmaCh17G005350Cucurbita pepo (Zucchini)cmacpeB381
CmaCh17G005350Bottle gourd (USVL1VR-Ls)cmalsiB331
CmaCh17G005350Cucumber (Gy14) v2cgybcmaB756
CmaCh17G005350Melon (DHL92) v3.6.1cmamedB365
CmaCh17G005350Silver-seed gourdcarcmaB0105
CmaCh17G005350Silver-seed gourdcarcmaB0109