CmaCh17G005100 (gene) Cucurbita maxima (Rimu)

Overview
NameCmaCh17G005100
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu))
DescriptionShort-chain dehydrogenase/reductase family protein
LocationCma_Chr17 : 3414333 .. 3416473 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACTTCAAAGTTTGATTACGTGGCTTGCTCTATTGAAGAATCCAATGATTTGGAGATCATGACCATTGACGAATTGCAGAGTAGTCTACTAGTTCATGAAGAACGTATGCAATAACTTATTGTGGAAGAGCAGGCATTGAAGCTCGCTCTTGACAGTAGTACAAGGAGAACAAATTGTGAGGTGGCACATTTCAAGGTAGAGGACGAGGACGTGGGACATTAGGTAACAAAAGTTTTGTTGAGTGTTTTTATTGTCATGACCTTGGTCATTTTCAGTATGAATGTTCCAAGAAGTACGAGGGAAAGGAATCACAAGTTCATTTGACTGAAACTTCTGAACCGCTGCTTCTAATGACATATGTTGAAGTGATGGTAGAACAAAAGGAGGACTCAACAGGTTGTTTGTCTGAAATTGAAGCTCCAAAAGCTGTAATAACAAAAGAATGATTATTTATGATTCTTAGATTCAGACTGCAACAACCACACATGCGAATATAAAGAATTCTTTTCAAAACTAGATGAAGGCTTTCACAAGTTTGTAAAGCTAGGTGACAACTCCAACGTTGGTGTGACAGGAAAAGAATGCATTCATCTCCAAGTTAATAACATCTCCCACGTTATCACAGAGATATTTTATGTTAGATAAAAGATTGTTTTTTTCTTTTCCTTAGGTTATTCATGTTTTCATTAATTAGAGGGTTATTTGAATTAACGAAATACAGGTAGAGTGGGAGAGAGTATTTTTAGCTGGCCATTTCAGCATCTTTAGCCCCAAGATTTGTTGGCCAATTTGGCCATTTTTAGATGATAGGTTGTTTTAAATAGTCCCATCAATGAGAAACATTCTCAGTGTTTTTTCCAGCAGAATCAAATCTCAAAGTTTCTTCAGCTTTTCTGTTTTCCTTTCCTTCAAACAAAGTTTCTTGGTCAGTTTTTATTGATTTTTTCACGAGATGAATTGCTCAGTCAAAAGACAATCATTTTATGTTTCTCAATCGAAAATTAACCTCTTAATCATTGGTCAATTGAAGAAAGGCTTGACTACCCTTCACTGTGAGAGAGATCTTATCAAAGACAAGCATATCTATAAATAGGATGTTTATCCTTCTTACCAAGATTCAATCTTAGAGGATCAATGTTTTCACACTCCTGCACATAATTTGGAGAATCTTTGGCACTACCGGTATGGTCACCTAAATTTGGGAGGTCTCAAAACTCTAAAACAGATGTAGATGGTTCATGGCTTGTGAGAACTTGTATGTTCTAATTTATTATGTGAAGATTGTCCGTTGGGAAAGTAAAATAAAAGACAATTTCCACGAGAAAGTATGTGGAGAGCATCAAAGCCACTTCAACTATATATGTGGTTGAATTTCACCTATGTCAAACAACCACAAAAGGTATATTCCAACTTTATTGATGATTTCAGCAGAAAATTATGGGTGTTTTTCTTAATAAAAAAATTAGAAGCCTTCAGAATGTTCCAACTCGTCGGAATCATGAACTTAGAATGTTCCAACTCGTTCTGATTAGAGTGATCCTGATGAGTTCTGAAGCCTTAAGGGAGGGAATGTTGCAAAAGTTTTAGTGTTTTATGTAGGAGATTTGGAGGATAGAAAAATTATGGGTAGTTTTACGTCACAGGAGCTGTATCATGATCCCGACGACTTCAATCTGGTGATGTGTGTGAACGTCAAAGGCATCGCATTAGGCATAAAGCACGCGACGTGTGTGATGATACCCAAAGCTCCCAGTTGCATAATCTCGACTGCTAGCGTGGCAAGCGTTTCAGAAGGAATGGGTCCACACGCCTACACAACATCCAAACATGCCATTGTCGGCCTCACTAAGAACACTGTCTGCGAACTTGGCCGCTATGGTATACGTGTCAACTGCATTTCGCCGTTCGGAGTTGCCACGTTGATGCTTGTGAACGCGTGGAGGGATGACAAAAACGAGTTTATGAACTTCGGGATTCCGTCGCCGGCTGAGGTGGACCAAATAGAGGAGTTCATTAGGGGTTTGGACAATCTTAAGGACCCCAATGAAGCCTTTTGGGGAACCCAAAGCAAAGCCATGAGAATTTATGTTCGGAATGGACAATATCATAGCATTAGTGTGGAGATCTATAATTTCTAA

mRNA sequence

ATGACTTCAAAGTTTGATTACGTGGCTTGCTCTATTGAAGAATCCAATGATTTGGAGATCATGACCATTGACGAATTGCAGAGTAGTCTACTAGTTCATGAAGAACGAGATTTGGAGGATAGAAAAATTATGGGTAGTTTTACGTCACAGGAGCTGTATCATGATCCCGACGACTTCAATCTGGTGATGTGTGTGAACGTCAAAGGCATCGCATTAGGCATAAAGCACGCGACGTGTGTGATGATACCCAAAGCTCCCAGTTGCATAATCTCGACTGCTAGCGTGGCAAGCGTTTCAGAAGGAATGGGTCCACACGCCTACACAACATCCAAACATGCCATTGTCGGCCTCACTAAGAACACTGTCTGCGAACTTGGCCGCTATGGTATACGTGTCAACTGCATTTCGCCGTTCGGAGTTGCCACGTTGATGCTTGTGAACGCGTGGAGGGATGACAAAAACGAGTTTATGAACTTCGGGATTCCGTCGCCGGCTGAGGTGGACCAAATAGAGGAGTTCATTAGGGGTTTGGACAATCTTAAGGACCCCAATGAAGCCTTTTGGGGAACCCAAAGCAAAGCCATGAGAATTTATGTTCGGAATGGACAATATCATAGCATTAGTGTGGAGATCTATAATTTCTAA

Coding sequence (CDS)

ATGACTTCAAAGTTTGATTACGTGGCTTGCTCTATTGAAGAATCCAATGATTTGGAGATCATGACCATTGACGAATTGCAGAGTAGTCTACTAGTTCATGAAGAACGAGATTTGGAGGATAGAAAAATTATGGGTAGTTTTACGTCACAGGAGCTGTATCATGATCCCGACGACTTCAATCTGGTGATGTGTGTGAACGTCAAAGGCATCGCATTAGGCATAAAGCACGCGACGTGTGTGATGATACCCAAAGCTCCCAGTTGCATAATCTCGACTGCTAGCGTGGCAAGCGTTTCAGAAGGAATGGGTCCACACGCCTACACAACATCCAAACATGCCATTGTCGGCCTCACTAAGAACACTGTCTGCGAACTTGGCCGCTATGGTATACGTGTCAACTGCATTTCGCCGTTCGGAGTTGCCACGTTGATGCTTGTGAACGCGTGGAGGGATGACAAAAACGAGTTTATGAACTTCGGGATTCCGTCGCCGGCTGAGGTGGACCAAATAGAGGAGTTCATTAGGGGTTTGGACAATCTTAAGGACCCCAATGAAGCCTTTTGGGGAACCCAAAGCAAAGCCATGAGAATTTATGTTCGGAATGGACAATATCATAGCATTAGTGTGGAGATCTATAATTTCTAA

Protein sequence

MTSKFDYVACSIEESNDLEIMTIDELQSSLLVHEERDLEDRKIMGSFTSQELYHDPDDFNLVMCVNVKGIALGIKHATCVMIPKAPSCIISTASVASVSEGMGPHAYTTSKHAIVGLTKNTVCELGRYGIRVNCISPFGVATLMLVNAWRDDKNEFMNFGIPSPAEVDQIEEFIRGLDNLKDPNEAFWGTQSKAMRIYVRNGQYHSISVEIYNF
Homology
[Close]
BLAST of CmaCh17G005100 vs. Swiss-Prot
Match: SDR2A_ARATH (Short-chain dehydrogenase reductase 2a OS=Arabidopsis thaliana GN=SDR2a PE=3 SV=1)

HSP 1 Score: 154.8 bits (390), Expect = 1.0e-36
Identity = 80/128 (62.50%), Postives = 92/128 (71.88%), Query Frame = 1 

Query: 55  DPDDFNLVMCVNVKGIALGIKHATCVMIPKA-PSCIISTASVASVSEGMGPHAYTTSKHA 114
           D D+F+ VM VNV+G+ LG+KH    MI +    CIISTASVA V  GMGPHAYT SKHA
Sbjct: 137 DADEFDHVMRVNVRGVGLGMKHGARAMIKRGFKGCIISTASVAGVMGGMGPHAYTASKHA 196

Query: 115 IVGLTKNTVCELGRYGIRVNCISPFGVATLMLVNAWRDDKNEFMNFGIPSPAEVDQIEEF 174
           IVGLTKN  CELG+YGIRVNCISPFGVAT MLVNAWR         G     +V+++EEF
Sbjct: 197 IVGLTKNAACELGKYGIRVNCISPFGVATSMLVNAWRKTSG-----GDVEDDDVEEMEEF 256

Query: 175 IRGLDNLK 182
           +R L NLK
Sbjct: 257 VRSLANLK 259

[Close]
BLAST of CmaCh17G005100 vs. Swiss-Prot
Match: TS2_MAIZE (Sex determination protein tasselseed-2 OS=Zea mays GN=TS2 PE=2 SV=1)

HSP 1 Score: 144.4 bits (363), Expect = 1.4e-33
Identity = 74/143 (51.75%), Postives = 94/143 (65.73%), Query Frame = 1 

Query: 52  LYHDPDDFNLVMCVNVKGIALGIKHATCVMIPKAPSCIISTASVASVSEGMGPHAYTTSK 111
           L  D  +F+ V+ VN  G ALG+KHA   M P+    I+S ASVA+V  G+GPHAYT SK
Sbjct: 152 LSFDAAEFDRVLRVNALGAALGMKHAARAMAPRRAGSIVSVASVAAVLGGLGPHAYTASK 211

Query: 112 HAIVGLTKNTVCELGRYGIRVNCISPFGVATLMLVNAWRD-----------DKNEFMNFG 171
           HAIVGLTKN  CEL  +G+RVNC+SPFGVAT ML+NAWR            D +  ++  
Sbjct: 212 HAIVGLTKNAACELRAHGVRVNCVSPFGVATPMLINAWRQGHDDATADADRDLDLDLDVT 271

Query: 172 IPSPAEVDQIEEFIRGLDNLKDP 184
           +PS  EV+++EE +RGL  LK P
Sbjct: 272 VPSDQEVEKMEEVVRGLATLKGP 294

[Close]
BLAST of CmaCh17G005100 vs. Swiss-Prot
Match: ZERSY_ZINZE (Zerumbone synthase OS=Zingiber zerumbet GN=ZSD1 PE=1 SV=1)

HSP 1 Score: 106.3 bits (264), Expect = 4.2e-22
Identity = 50/88 (56.82%), Postives = 64/88 (72.73%), Query Frame = 1 

Query: 55  DPDDFNLVMCVNVKGIALGIKHATCVMIPKAPSCIISTASVASVSEGMGPHAYTTSKHAI 114
           D ++F  V  +NV G+ LG+KHA  +MIPK    I+S ASV+SV  G GPH YT +KHA+
Sbjct: 103 DFNEFKKVFDINVNGVFLGMKHAARIMIPKMKGSIVSLASVSSVIAGAGPHGYTGAKHAV 162

Query: 115 VGLTKNTVCELGRYGIRVNCISPFGVAT 143
           VGLTK+   ELGR+GIRVNC+SP+ V T
Sbjct: 163 VGLTKSVAAELGRHGIRVNCVSPYAVPT 190

[Close]
BLAST of CmaCh17G005100 vs. Swiss-Prot
Match: MOMAS_ORYSJ (Momilactone A synthase OS=Oryza sativa subsp. japonica GN=Os04g0179200 PE=2 SV=1)

HSP 1 Score: 99.8 bits (247), Expect = 4.0e-20
Identity = 51/86 (59.30%), Postives = 60/86 (69.77%), Query Frame = 1 

Query: 57  DDFNLVMCVNVKGIALGIKHATCVMIPKAPSCIISTASVASVSEGMGPHAYTTSKHAIVG 116
           +DF  V+ VN+ G  LG KHA  VM P     IISTAS++S   G   HAYTTSKHA+VG
Sbjct: 116 EDFERVLAVNLVGPFLGTKHAARVMAPARRGSIISTASLSSSVSGAASHAYTTSKHALVG 175

Query: 117 LTKNTVCELGRYGIRVNCISPFGVAT 143
            T+N   ELGR+GIRVNC+SP GVAT
Sbjct: 176 FTENAAGELGRHGIRVNCVSPAGVAT 201

[Close]
BLAST of CmaCh17G005100 vs. Swiss-Prot
Match: ABA2_ARATH (Xanthoxin dehydrogenase OS=Arabidopsis thaliana GN=ABA2 PE=1 SV=1)

HSP 1 Score: 99.4 bits (246), Expect = 5.2e-20
Identity = 51/108 (47.22%), Postives = 70/108 (64.81%), Query Frame = 1 

Query: 58  DFNLVMCVNVKGIALGIKHATCVMIPKAPSCIISTASVASVSEGMGPHAYTTSKHAIVGL 117
           +F +   VNVKG  L +KHA  VMIP+    I+S  SV  V  G+GPH+Y  SKHA++GL
Sbjct: 124 EFEMTFDVNVKGAFLSMKHAARVMIPEKKGSIVSLCSVGGVVGGVGPHSYVGSKHAVLGL 183

Query: 118 TKNTVCELGRYGIRVNCISPFGVAT-LMLVNAWRDDKNE-----FMNF 160
           T++   ELG++GIRVNC+SP+ VAT L L +   +++ E     F NF
Sbjct: 184 TRSVAAELGQHGIRVNCVSPYAVATKLALAHLPEEERTEDAFVGFRNF 231

[Close]
BLAST of CmaCh17G005100 vs. TrEMBL
Match: A0A0A0LF57_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G730750 PE=4 SV=1)

HSP 1 Score: 207.2 bits (526), Expect = 2.0e-50
Identity = 108/189 (57.14%), Postives = 138/189 (73.02%), Query Frame = 1 

Query: 3   SKFDYVACSIEESNDLEIMTIDELQSSLLVHEERDL--EDRKIMGSFTSQE---LYHDPD 62
           S   +V C +   +D+E +    + +++ +H + D+   +  ++G+ ++     L  DPD
Sbjct: 82  SPVSFVHCDVSSEDDVENL----VSTTVCLHGQVDIIFNNAGVLGNQSNSHKSILDFDPD 141

Query: 63  DFNLVMCVNVKGIALGIKHATCVMIPKAPSCIISTASVASVSEGMGPHAYTTSKHAIVGL 122
           +F  VM VNVKG+ALGIKHA  VMIP+A  CIISTASVA V  G+GPHAYT SKHAIVGL
Sbjct: 142 EFERVMRVNVKGVALGIKHAARVMIPRATGCIISTASVAGVLGGLGPHAYTASKHAIVGL 201

Query: 123 TKNTVCELGRYGIRVNCISPFGVATLMLVNAWR---DDKNEFMNFGIPSPAEVDQIEEFI 182
           TKNT CELGRYGIRVNCISPFGVAT MLVNAWR   +++ E MN+G+PS AEVD++EEF+
Sbjct: 202 TKNTACELGRYGIRVNCISPFGVATSMLVNAWRADVEEEEECMNYGVPSAAEVDKMEEFV 261

Query: 183 RGLDNLKDP 184
           RGL NLK P
Sbjct: 262 RGLANLKGP 266

[Close]
BLAST of CmaCh17G005100 vs. TrEMBL
Match: A0A0B2S1S9_GLYSO (Sex determination protein tasselseed-2 OS=Glycine soja GN=glysoja_001174 PE=4 SV=1)

HSP 1 Score: 201.8 bits (512), Expect = 8.2e-49
Identity = 102/179 (56.98%), Postives = 128/179 (71.51%), Query Frame = 1 

Query: 7   YVACSIEESNDLEIMTIDELQSSLLVHEERDLEDRKIMGSFTSQE--LYHDPDDFNLVMC 66
           YV C +    ++E +    +  S   H +    +  ++G+ +  +  +  DPD+F+ VMC
Sbjct: 80  YVHCDVSIEKEVEKLVSSTI--SRYGHLDIMFNNAGVLGNQSKNKSIVNFDPDEFDKVMC 139

Query: 67  VNVKGIALGIKHATCVMIPKAPSCIISTASVASVSEGMGPHAYTTSKHAIVGLTKNTVCE 126
           VNVKG+ALGIKHA  VMIP+   CIIST+SVA V  G+GPHAYT SKHAIVG+TKNT CE
Sbjct: 140 VNVKGVALGIKHAARVMIPRGIGCIISTSSVAGVMGGLGPHAYTASKHAIVGITKNTACE 199

Query: 127 LGRYGIRVNCISPFGVATLMLVNAWRDDKNEFMNFGIPSPAEVDQIEEFIRGLDNLKDP 184
           LGRYGIRVNCISPFGVAT MLVNAWR   +E  NFG+P P EV++IEEF+RGL NL+ P
Sbjct: 200 LGRYGIRVNCISPFGVATSMLVNAWRPCDDEGTNFGVPFPEEVEKIEEFVRGLANLRGP 256

[Close]
BLAST of CmaCh17G005100 vs. TrEMBL
Match: K7MTQ6_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_18G209200 PE=4 SV=1)

HSP 1 Score: 201.8 bits (512), Expect = 8.2e-49
Identity = 102/179 (56.98%), Postives = 128/179 (71.51%), Query Frame = 1 

Query: 7   YVACSIEESNDLEIMTIDELQSSLLVHEERDLEDRKIMGSFTSQE--LYHDPDDFNLVMC 66
           YV C +    ++E +    +  S   H +    +  ++G+ +  +  +  DPD+F+ VMC
Sbjct: 80  YVHCDVSIEKEVEKLVSSTI--SRYGHLDIMFNNAGVLGNQSKNKSIVNFDPDEFDKVMC 139

Query: 67  VNVKGIALGIKHATCVMIPKAPSCIISTASVASVSEGMGPHAYTTSKHAIVGLTKNTVCE 126
           VNVKG+ALGIKHA  VMIP+   CIIST+SVA V  G+GPHAYT SKHAIVG+TKNT CE
Sbjct: 140 VNVKGVALGIKHAARVMIPRGIGCIISTSSVAGVMGGLGPHAYTASKHAIVGITKNTACE 199

Query: 127 LGRYGIRVNCISPFGVATLMLVNAWRDDKNEFMNFGIPSPAEVDQIEEFIRGLDNLKDP 184
           LGRYGIRVNCISPFGVAT MLVNAWR   +E  NFG+P P EV++IEEF+RGL NL+ P
Sbjct: 200 LGRYGIRVNCISPFGVATSMLVNAWRPCDDEGTNFGVPFPEEVEKIEEFVRGLANLRGP 256

[Close]
BLAST of CmaCh17G005100 vs. TrEMBL
Match: A0A0B2RCD6_GLYSO (Sex determination protein tasselseed-2 OS=Glycine soja GN=glysoja_005272 PE=3 SV=1)

HSP 1 Score: 199.1 bits (505), Expect = 5.3e-48
Identity = 101/182 (55.49%), Postives = 130/182 (71.43%), Query Frame = 1 

Query: 7   YVACSIEESNDLEIMTIDELQSSLLVHEERDLEDRKIMGSFTSQE--LYHDPDDFNLVMC 66
           YV C +    ++E +    +  S   H +    +  ++G+ +  +  +  DPD+F+ VMC
Sbjct: 120 YVHCDVSIEKEVENLISSTI--SRYGHLDIMFNNAGVLGNQSKNKSIVNFDPDEFDKVMC 179

Query: 67  VNVKGIALGIKHATCVMIPKAPSCIISTASVASVSEGMGPHAYTTSKHAIVGLTKNTVCE 126
           VNVKG+ALGIKHA  VMIP+   CI+ST+SVA V  G+GPHAYT SKHAIVG+TKNT CE
Sbjct: 180 VNVKGVALGIKHAARVMIPRGVGCIVSTSSVAGVMGGLGPHAYTASKHAIVGITKNTACE 239

Query: 127 LGRYGIRVNCISPFGVATLMLVNAWR---DDKNEFMNFGIPSPAEVDQIEEFIRGLDNLK 184
           LGRYGIRVNCISPFGVAT MLVNAW+   D  +E +NFG+P P EV++IEEF+RGL NL+
Sbjct: 240 LGRYGIRVNCISPFGVATSMLVNAWKPCGDGDDEGINFGVPFPEEVEKIEEFVRGLANLR 299

[Close]
BLAST of CmaCh17G005100 vs. TrEMBL
Match: K7LGJ5_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_09G279800 PE=3 SV=1)

HSP 1 Score: 199.1 bits (505), Expect = 5.3e-48
Identity = 101/182 (55.49%), Postives = 130/182 (71.43%), Query Frame = 1 

Query: 7   YVACSIEESNDLEIMTIDELQSSLLVHEERDLEDRKIMGSFTSQE--LYHDPDDFNLVMC 66
           YV C +    ++E +    +  S   H +    +  ++G+ +  +  +  DPD+F+ VMC
Sbjct: 120 YVHCDVSIEKEVENLISSTI--SRYGHLDIMFNNAGVLGNQSKNKSIVNFDPDEFDKVMC 179

Query: 67  VNVKGIALGIKHATCVMIPKAPSCIISTASVASVSEGMGPHAYTTSKHAIVGLTKNTVCE 126
           VNVKG+ALGIKHA  VMIP+   CI+ST+SVA V  G+GPHAYT SKHAIVG+TKNT CE
Sbjct: 180 VNVKGVALGIKHAARVMIPRGVGCIVSTSSVAGVMGGLGPHAYTASKHAIVGITKNTACE 239

Query: 127 LGRYGIRVNCISPFGVATLMLVNAWR---DDKNEFMNFGIPSPAEVDQIEEFIRGLDNLK 184
           LGRYGIRVNCISPFGVAT MLVNAW+   D  +E +NFG+P P EV++IEEF+RGL NL+
Sbjct: 240 LGRYGIRVNCISPFGVATSMLVNAWKPCGDGDDEGINFGVPFPEEVEKIEEFVRGLANLR 299

[Close]
BLAST of CmaCh17G005100 vs. TAIR10
Match: AT3G51680.1 (AT3G51680.1 NAD(P)-binding Rossmann-fold superfamily protein)

HSP 1 Score: 154.8 bits (390), Expect = 5.8e-38
Identity = 80/128 (62.50%), Postives = 92/128 (71.88%), Query Frame = 1 

Query: 55  DPDDFNLVMCVNVKGIALGIKHATCVMIPKA-PSCIISTASVASVSEGMGPHAYTTSKHA 114
           D D+F+ VM VNV+G+ LG+KH    MI +    CIISTASVA V  GMGPHAYT SKHA
Sbjct: 137 DADEFDHVMRVNVRGVGLGMKHGARAMIKRGFKGCIISTASVAGVMGGMGPHAYTASKHA 196

Query: 115 IVGLTKNTVCELGRYGIRVNCISPFGVATLMLVNAWRDDKNEFMNFGIPSPAEVDQIEEF 174
           IVGLTKN  CELG+YGIRVNCISPFGVAT MLVNAWR         G     +V+++EEF
Sbjct: 197 IVGLTKNAACELGKYGIRVNCISPFGVATSMLVNAWRKTSG-----GDVEDDDVEEMEEF 256

Query: 175 IRGLDNLK 182
           +R L NLK
Sbjct: 257 VRSLANLK 259

[Close]
BLAST of CmaCh17G005100 vs. TAIR10
Match: AT1G52340.1 (AT1G52340.1 NAD(P)-binding Rossmann-fold superfamily protein)

HSP 1 Score: 99.4 bits (246), Expect = 2.9e-21
Identity = 51/108 (47.22%), Postives = 70/108 (64.81%), Query Frame = 1 

Query: 58  DFNLVMCVNVKGIALGIKHATCVMIPKAPSCIISTASVASVSEGMGPHAYTTSKHAIVGL 117
           +F +   VNVKG  L +KHA  VMIP+    I+S  SV  V  G+GPH+Y  SKHA++GL
Sbjct: 124 EFEMTFDVNVKGAFLSMKHAARVMIPEKKGSIVSLCSVGGVVGGVGPHSYVGSKHAVLGL 183

Query: 118 TKNTVCELGRYGIRVNCISPFGVAT-LMLVNAWRDDKNE-----FMNF 160
           T++   ELG++GIRVNC+SP+ VAT L L +   +++ E     F NF
Sbjct: 184 TRSVAAELGQHGIRVNCVSPYAVATKLALAHLPEEERTEDAFVGFRNF 231

[Close]
BLAST of CmaCh17G005100 vs. TAIR10
Match: AT3G26770.1 (AT3G26770.1 NAD(P)-binding Rossmann-fold superfamily protein)

HSP 1 Score: 95.1 bits (235), Expect = 5.5e-20
Identity = 57/172 (33.14%), Postives = 91/172 (52.91%), Query Frame = 1 

Query: 43  IMGSFTSQELYH-DPDDFNLVMCVNVKGIALGIKHATCVMIPKAPSCIISTASVASVSEG 102
           I+G  T   +   D  +F  VM +NV G+  GIKHA   MIP    CI+ T+SVA V+ G
Sbjct: 127 IVGPMTPASISQLDMTEFERVMRINVFGVVSGIKHAAKFMIPARSGCILCTSSVAGVTGG 186

Query: 103 MGPHAYTTSKHAIVGLTKNTVCELGRYGIRVNCISPFGVATLMLVNAWRDDKNEFMNFGI 162
           + PH+YT SK    G+ K+   EL  +G+R+NCISP  VAT + ++        ++    
Sbjct: 187 LAPHSYTISKFTTPGIVKSAASELCEHGVRINCISPGTVATPLTLS--------YLQKVF 246

Query: 163 PSPAEVDQIEEFIRGLDNLKDPNEAFWGTQSKAMRIYVRNGQY---HSISVE 211
           P  +E +++ E ++G+  LK            A+ +   +G+Y   H++ V+
Sbjct: 247 PKVSE-EKLRETVKGMGELKGAECEEADVAKAALYLASNDGKYVTGHNLVVD 289

[Close]
BLAST of CmaCh17G005100 vs. TAIR10
Match: AT3G42960.1 (AT3G42960.1 TAPETUM 1)

HSP 1 Score: 91.7 bits (226), Expect = 6.1e-19
Identity = 65/170 (38.24%), Postives = 88/170 (51.76%), Query Frame = 1 

Query: 7   YVACSIEESNDLEIMTIDELQSS-----LLVHEERDLEDRKIMGSFTSQELYHDPDDFNL 66
           YV C + +  D+E      ++       +  +    L +  IMG         D D  N 
Sbjct: 58  YVHCDVSKEADVEAAVELAMRRKGRLDVMFNNAGMSLNEGSIMGM--------DVDMVNK 117

Query: 67  VMCVNVKGIALGIKHATCVMIPKAPS-CIISTASVASVSEGMGPHAYTTSKHAIVGLTKN 126
           ++ VNV G+  GIKHA   MI       II T+S + +  G+G HAYT SK AI G+ + 
Sbjct: 118 LVSVNVNGVLHGIKHAAKAMIKGGRGGSIICTSSSSGLMGGLGGHAYTLSKGAINGVVRT 177

Query: 127 TVCELGRYGIRVNCISPFGVATLMLVNAWRDDKNEFMNFGIPSPAEVDQI 171
           T CELG +GIRVN ISP GV T +LVNA+R    +F+N    + AEV  I
Sbjct: 178 TACELGSHGIRVNSISPHGVPTDILVNAYR----KFLNHDKLNVAEVTDI 215

[Close]
BLAST of CmaCh17G005100 vs. TAIR10
Match: AT3G26760.1 (AT3G26760.1 NAD(P)-binding Rossmann-fold superfamily protein)

HSP 1 Score: 89.4 bits (220), Expect = 3.0e-18
Identity = 41/97 (42.27%), Postives = 62/97 (63.92%), Query Frame = 1 

Query: 55  DPDDFNLVMCVNVKGIALGIKHATCVMIPKAPSCIISTASVASVSEGMGPHAYTTSKHAI 114
           D D ++ VM +NV+G  LGIKHA   MIP     I+  +S++ +  G+GPHAY+ SK  I
Sbjct: 135 DMDTYDKVMRLNVRGTVLGIKHAARAMIPAGSGSILCLSSISGLMGGLGPHAYSISKFTI 194

Query: 115 VGLTKNTVCELGRYGIRVNCISPFGVATLMLVNAWRD 152
            G+ K    EL ++G+R+NCISP G+ T + +  +R+
Sbjct: 195 PGVVKTVASELCKHGLRINCISPAGIPTPLTLRMFRE 231

[Close]
BLAST of CmaCh17G005100 vs. NCBI nr
Match: gi|449439827|ref|XP_004137687.1| (PREDICTED: short-chain dehydrogenase reductase 2a [Cucumis sativus])

HSP 1 Score: 207.2 bits (526), Expect = 2.8e-50
Identity = 108/189 (57.14%), Postives = 138/189 (73.02%), Query Frame = 1 

Query: 3   SKFDYVACSIEESNDLEIMTIDELQSSLLVHEERDL--EDRKIMGSFTSQE---LYHDPD 62
           S   +V C +   +D+E +    + +++ +H + D+   +  ++G+ ++     L  DPD
Sbjct: 82  SPVSFVHCDVSSEDDVENL----VSTTVCLHGQVDIIFNNAGVLGNQSNSHKSILDFDPD 141

Query: 63  DFNLVMCVNVKGIALGIKHATCVMIPKAPSCIISTASVASVSEGMGPHAYTTSKHAIVGL 122
           +F  VM VNVKG+ALGIKHA  VMIP+A  CIISTASVA V  G+GPHAYT SKHAIVGL
Sbjct: 142 EFERVMRVNVKGVALGIKHAARVMIPRATGCIISTASVAGVLGGLGPHAYTASKHAIVGL 201

Query: 123 TKNTVCELGRYGIRVNCISPFGVATLMLVNAWR---DDKNEFMNFGIPSPAEVDQIEEFI 182
           TKNT CELGRYGIRVNCISPFGVAT MLVNAWR   +++ E MN+G+PS AEVD++EEF+
Sbjct: 202 TKNTACELGRYGIRVNCISPFGVATSMLVNAWRADVEEEEECMNYGVPSAAEVDKMEEFV 261

Query: 183 RGLDNLKDP 184
           RGL NLK P
Sbjct: 262 RGLANLKGP 266

[Close]
BLAST of CmaCh17G005100 vs. NCBI nr
Match: gi|659083428|ref|XP_008442351.1| (PREDICTED: short-chain dehydrogenase reductase 2a [Cucumis melo])

HSP 1 Score: 204.5 bits (519), Expect = 1.8e-49
Identity = 107/189 (56.61%), Postives = 137/189 (72.49%), Query Frame = 1 

Query: 3   SKFDYVACSIEESNDLEIMTIDELQSSLLVHEERDL--EDRKIMGSFTSQE---LYHDPD 62
           S   +V C +   +D+E +    + +++ +H   D+   +  ++GS +      L  DPD
Sbjct: 81  SPVSFVHCDVSSEDDVERL----VSTTVCLHGHVDIIFNNAGVLGSQSKSHKSILDFDPD 140

Query: 63  DFNLVMCVNVKGIALGIKHATCVMIPKAPSCIISTASVASVSEGMGPHAYTTSKHAIVGL 122
           +F  VM VNVKG+ALGIKHA  VMIP+A  CIISTASVA V  G+GPHAYT SKHAIVGL
Sbjct: 141 EFERVMRVNVKGVALGIKHAARVMIPRATGCIISTASVAGVLGGLGPHAYTASKHAIVGL 200

Query: 123 TKNTVCELGRYGIRVNCISPFGVATLMLVNAWR---DDKNEFMNFGIPSPAEVDQIEEFI 182
           TKNT CELGR+GIRVNCISPFGVAT MLVNAWR   +++++ MN+G+PS AEVD++EEF+
Sbjct: 201 TKNTACELGRHGIRVNCISPFGVATSMLVNAWRADVEEEDQCMNYGVPSAAEVDKMEEFV 260

Query: 183 RGLDNLKDP 184
           RGL NLK P
Sbjct: 261 RGLANLKGP 265

[Close]
BLAST of CmaCh17G005100 vs. NCBI nr
Match: gi|734420170|gb|KHN40676.1| (Sex determination protein tasselseed-2 [Glycine soja])

HSP 1 Score: 201.8 bits (512), Expect = 1.2e-48
Identity = 102/179 (56.98%), Postives = 128/179 (71.51%), Query Frame = 1 

Query: 7   YVACSIEESNDLEIMTIDELQSSLLVHEERDLEDRKIMGSFTSQE--LYHDPDDFNLVMC 66
           YV C +    ++E +    +  S   H +    +  ++G+ +  +  +  DPD+F+ VMC
Sbjct: 80  YVHCDVSIEKEVEKLVSSTI--SRYGHLDIMFNNAGVLGNQSKNKSIVNFDPDEFDKVMC 139

Query: 67  VNVKGIALGIKHATCVMIPKAPSCIISTASVASVSEGMGPHAYTTSKHAIVGLTKNTVCE 126
           VNVKG+ALGIKHA  VMIP+   CIIST+SVA V  G+GPHAYT SKHAIVG+TKNT CE
Sbjct: 140 VNVKGVALGIKHAARVMIPRGIGCIISTSSVAGVMGGLGPHAYTASKHAIVGITKNTACE 199

Query: 127 LGRYGIRVNCISPFGVATLMLVNAWRDDKNEFMNFGIPSPAEVDQIEEFIRGLDNLKDP 184
           LGRYGIRVNCISPFGVAT MLVNAWR   +E  NFG+P P EV++IEEF+RGL NL+ P
Sbjct: 200 LGRYGIRVNCISPFGVATSMLVNAWRPCDDEGTNFGVPFPEEVEKIEEFVRGLANLRGP 256

[Close]
BLAST of CmaCh17G005100 vs. NCBI nr
Match: gi|356568176|ref|XP_003552289.1| (PREDICTED: short-chain dehydrogenase reductase 2a-like [Glycine max])

HSP 1 Score: 201.8 bits (512), Expect = 1.2e-48
Identity = 102/179 (56.98%), Postives = 128/179 (71.51%), Query Frame = 1 

Query: 7   YVACSIEESNDLEIMTIDELQSSLLVHEERDLEDRKIMGSFTSQE--LYHDPDDFNLVMC 66
           YV C +    ++E +    +  S   H +    +  ++G+ +  +  +  DPD+F+ VMC
Sbjct: 80  YVHCDVSIEKEVEKLVSSTI--SRYGHLDIMFNNAGVLGNQSKNKSIVNFDPDEFDKVMC 139

Query: 67  VNVKGIALGIKHATCVMIPKAPSCIISTASVASVSEGMGPHAYTTSKHAIVGLTKNTVCE 126
           VNVKG+ALGIKHA  VMIP+   CIIST+SVA V  G+GPHAYT SKHAIVG+TKNT CE
Sbjct: 140 VNVKGVALGIKHAARVMIPRGIGCIISTSSVAGVMGGLGPHAYTASKHAIVGITKNTACE 199

Query: 127 LGRYGIRVNCISPFGVATLMLVNAWRDDKNEFMNFGIPSPAEVDQIEEFIRGLDNLKDP 184
           LGRYGIRVNCISPFGVAT MLVNAWR   +E  NFG+P P EV++IEEF+RGL NL+ P
Sbjct: 200 LGRYGIRVNCISPFGVATSMLVNAWRPCDDEGTNFGVPFPEEVEKIEEFVRGLANLRGP 256

[Close]
BLAST of CmaCh17G005100 vs. NCBI nr
Match: gi|734396229|gb|KHN29548.1| (Sex determination protein tasselseed-2 [Glycine soja])

HSP 1 Score: 199.1 bits (505), Expect = 7.6e-48
Identity = 101/182 (55.49%), Postives = 130/182 (71.43%), Query Frame = 1 

Query: 7   YVACSIEESNDLEIMTIDELQSSLLVHEERDLEDRKIMGSFTSQE--LYHDPDDFNLVMC 66
           YV C +    ++E +    +  S   H +    +  ++G+ +  +  +  DPD+F+ VMC
Sbjct: 120 YVHCDVSIEKEVENLISSTI--SRYGHLDIMFNNAGVLGNQSKNKSIVNFDPDEFDKVMC 179

Query: 67  VNVKGIALGIKHATCVMIPKAPSCIISTASVASVSEGMGPHAYTTSKHAIVGLTKNTVCE 126
           VNVKG+ALGIKHA  VMIP+   CI+ST+SVA V  G+GPHAYT SKHAIVG+TKNT CE
Sbjct: 180 VNVKGVALGIKHAARVMIPRGVGCIVSTSSVAGVMGGLGPHAYTASKHAIVGITKNTACE 239

Query: 127 LGRYGIRVNCISPFGVATLMLVNAWR---DDKNEFMNFGIPSPAEVDQIEEFIRGLDNLK 184
           LGRYGIRVNCISPFGVAT MLVNAW+   D  +E +NFG+P P EV++IEEF+RGL NL+
Sbjct: 240 LGRYGIRVNCISPFGVATSMLVNAWKPCGDGDDEGINFGVPFPEEVEKIEEFVRGLANLR 299

The following BLAST results are available for this feature:
BLAST of CmaCh17G005100 vs. Swiss-Prot
Match NameE-valueIdentityDescription
SDR2A_ARATH1.0e-3662.50Short-chain dehydrogenase reductase 2a OS=Arabidopsis thaliana GN=SDR2a PE=3 SV=... [more]
TS2_MAIZE1.4e-3351.75Sex determination protein tasselseed-2 OS=Zea mays GN=TS2 PE=2 SV=1[more]
ZERSY_ZINZE4.2e-2256.82Zerumbone synthase OS=Zingiber zerumbet GN=ZSD1 PE=1 SV=1[more]
MOMAS_ORYSJ4.0e-2059.30Momilactone A synthase OS=Oryza sativa subsp. japonica GN=Os04g0179200 PE=2 SV=1[more]
ABA2_ARATH5.2e-2047.22Xanthoxin dehydrogenase OS=Arabidopsis thaliana GN=ABA2 PE=1 SV=1[more]
BLAST of CmaCh17G005100 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LF57_CUCSA2.0e-5057.14Uncharacterized protein OS=Cucumis sativus GN=Csa_3G730750 PE=4 SV=1[more]
A0A0B2S1S9_GLYSO8.2e-4956.98Sex determination protein tasselseed-2 OS=Glycine soja GN=glysoja_001174 PE=4 SV... [more]
K7MTQ6_SOYBN8.2e-4956.98Uncharacterized protein OS=Glycine max GN=GLYMA_18G209200 PE=4 SV=1[more]
A0A0B2RCD6_GLYSO5.3e-4855.49Sex determination protein tasselseed-2 OS=Glycine soja GN=glysoja_005272 PE=3 SV... [more]
K7LGJ5_SOYBN5.3e-4855.49Uncharacterized protein OS=Glycine max GN=GLYMA_09G279800 PE=3 SV=1[more]
BLAST of CmaCh17G005100 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G51680.15.8e-3862.50 NAD(P)-binding Rossmann-fold superfamily protein[more]
AT1G52340.12.9e-2147.22 NAD(P)-binding Rossmann-fold superfamily protein[more]
AT3G26770.15.5e-2033.14 NAD(P)-binding Rossmann-fold superfamily protein[more]
AT3G42960.16.1e-1938.24 TAPETUM 1[more]
AT3G26760.13.0e-1842.27 NAD(P)-binding Rossmann-fold superfamily protein[more]
BLAST of CmaCh17G005100 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449439827|ref|XP_004137687.1|2.8e-5057.14PREDICTED: short-chain dehydrogenase reductase 2a [Cucumis sativus][more]
gi|659083428|ref|XP_008442351.1|1.8e-4956.61PREDICTED: short-chain dehydrogenase reductase 2a [Cucumis melo][more]
gi|734420170|gb|KHN40676.1|1.2e-4856.98Sex determination protein tasselseed-2 [Glycine soja][more]
gi|356568176|ref|XP_003552289.1|1.2e-4856.98PREDICTED: short-chain dehydrogenase reductase 2a-like [Glycine max][more]
gi|734396229|gb|KHN29548.1|7.6e-4855.49Sex determination protein tasselseed-2 [Glycine soja][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR002347SDR_fam
IPR016040NAD(P)-bd_dom
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0055114 oxidation-reduction process
cellular_component GO:0005575 cellular_component
molecular_function GO:0010301 xanthoxin dehydrogenase activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh17G005100.1CmaCh17G005100.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002347Short-chain dehydrogenase/reductase SDRPRINTSPR00081GDHRDHcoord: 81..97
score: 4.8E-11coord: 107..126
score: 4.8E-11coord: 128..145
score: 4.8
IPR002347Short-chain dehydrogenase/reductase SDRPANTHERPTHR24322FAMILY NOT NAMEDcoord: 107..138
score: 1.1E-35coord: 55..91
score: 1.1
IPR016040NAD(P)-binding domainGENE3DG3DSA:3.40.50.720coord: 54..163
score: 1.3
IPR016040NAD(P)-binding domainunknownSSF51735NAD(P)-binding Rossmann-fold domainscoord: 54..151
score: 1.41
NoneNo IPR availablePANTHERPTHR24322:SF309SHORT-CHAIN DEHYDROGENASE REDUCTASE 2Acoord: 107..138
score: 1.1E-35coord: 55..91
score: 1.1
NoneNo IPR availablePFAMPF13561adh_short_C2coord: 55..152
score: 2.4

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CmaCh17G005100Watermelon (97103) v2cmawmbB377
CmaCh17G005100Wax gourdcmawgoB0457
CmaCh17G005100Cucumber (Gy14) v1cgycmaB0295
CmaCh17G005100Cucurbita moschata (Rifu)cmacmoB353
CmaCh17G005100Wild cucumber (PI 183967)cmacpiB383
CmaCh17G005100Cucumber (Chinese Long) v2cmacuB379
CmaCh17G005100Melon (DHL92) v3.5.1cmameB313
CmaCh17G005100Watermelon (Charleston Gray)cmawcgB328
CmaCh17G005100Watermelon (97103) v1cmawmB351
CmaCh17G005100Cucurbita pepo (Zucchini)cmacpeB371
CmaCh17G005100Bottle gourd (USVL1VR-Ls)cmalsiB331
CmaCh17G005100Cucumber (Gy14) v2cgybcmaB763
CmaCh17G005100Melon (DHL92) v3.6.1cmamedB365
CmaCh17G005100Cucumber (Chinese Long) v3cmacucB0451