CmaCh17G005020 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh17G005020
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	DNA polymerase
Location	Cma_Chr17 : 3253734 .. 3259104 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCTGATAAAATGGAAAAGTCTGAGACGTTTTCCTTCGGTGTCTTCTTACTCGAGTTTATGGAGGAGCGGGGATTGGTCAGTTCTATTGCAATGGAATCCTTTGGTAGTGGTGTTAAGAAAAAGTCGAAAGGTGGCTATTATTATGCAAGCAATCTATTCATTGTTTGTAATTTTGATGTTACTTTACTTCCGATCAAGCTCAACCTTCCTATGATATGCCCACCTCTTGATTGGAAGAGTGTGTGTCCGCGGAATCAATCTCCTAGATATCTCTCTGATCTATCAAGGGGTTACCTAAGTGGACCGACTGGTGAGATTTATGATCGTTACTGCTTATTAAGTTCTGGTGACCTAAATCACTTATATATATAGGTTATTCTTCTTATTATAAGAATGATTACAAGTCTATGTGTAAAGTCATGAATGCGCCGCAGCGTCAGCCCTTTACAATCAACAGTGATTGGTTGAACCATTTAATGGAAAATGAAGACGATTTTGTTGACGATGGTCTTCTTATGCCACAATTTTTGGAAACGATGAATATCCGAGATGTTAGCCTCATTCTTAAAGATTTCCACATGAAGGATGAGGTGATATACAATGAATTTTCCTTTAACGATTTGTTACATATAGTGATTAAGACTATCCAACGTTCTCGCTATGAACGATTGATTCTCAATCTCGCAAGAGCCTACGATGGCTATAAATTTTACCTACCCGCCTTTCTTGACTTCAGAGGTCGAATTTATCGCTGTGGTATTTTGCATTTCCACGAGTGTGATCTAGCACGAAGCCTGATTGTATTTGCTAATCATAATCATCAGAAGGAGGAGATAAAATGTAATTCTTATATAGGAGATAAAATGTAATTCTTATATAAGAGATGAAATTAGCTTATCAACATTCTTCCATTTTCAGTCTTTCAACTCAATGGTTGAAGCAGTGGATTTTATCAACAATTTTAATAACAAAGACAATAAAATTATATCTCAAAACATAACGTTGGCTAAACGGCCTTTTCAGTTTGCAGCCAATATTTATGCAATGCAAAATCACAAATTTCAATTTTTAAAAGACTTTGTCCCTATTACCCAGGACGCAGCATCAAGTGCATATCAGATTATGAGTTACTTTTTATTGGATGAGAGCCTGGCTAAGAGAACAAATCTCTTCCTATCTCTGGATAATCCAAATCAAATCCAAGATGTTTATTTGTACTTCCTCGCAGAGCTTAAGGAGTTCATGAAAGCAGAACCTGAACTTGATCCTAATTTATGTTCGGTTGTTTGCAAACACCTCTCTCGCAAGATTGTTAAATCAATCTTTATGCCAATTATCTATGGAAAAACTGTAATGAGCACATCAACCGATCTGATGGTACATTTCTCTCAACACCTTACGAGTAAGGAATGCTTCAAAGTTTCCCCTGTCTGCTTTAAGTTCTTCAAAGAAAAATATCCTGGAATGGAATGCCTGATCAGGTTGATACGCCTTATAGGCTGGGTCGCGTCTTCTAGGGATAGTGCAGTTAAATATAATGTTAGTTACTTTACAAGTGTTCAGGATTATATGAAAATGGAGTCAACTTATATATGGGTATATGACCGACTTCATAAGAAGAGGCGTCGGGTTACTCTCAGAGTGTCTTCTTCTAAGAGAGATCGTAGGAAGACAGAGATCTCTACCTTCGTCAATTTCATCCATCAGAAGGATGCCTTTATTTCTATGAAAGTAGTTGAAGAAATGCCGAATTGTAATGCTCCTATATACACTGTCCACGACAACTTTATAACAACAATTGAGAAAAGCCCATTTATTCCAATGGCTTATCTCGAAGTCTTTCGTAGCTTGGGCCCTCCACTTTCAATCATTAACAAGTTCATCTATATAAATGTTATTGAGAATTTTAAATGTAGAAATTCATTTGATTATGAAAAGAATTGTTATTTCCAAGAAATATCTTACTGAATTTTTAATTAAAAATATTCCAGAGAATATAAGTAAGCATAACCAGATTCTTTGGGATAAAAAGATAAATGAAATAGTCACTTGTTACAGTAACTATGTGAAAAGAGTGTGCGGTGTAAATAATAGTTATTATGAATCATGGAAATCACATGAGGAAAAGTGGAATCAATTTTCATATAAATTGAAGAATTCTTTCTATGTCCATTACTGATAATGAATAAAAAAATGATGGCGTACAAAAATCAAACTCTCAATGCTACTACTGAACAGTTATTGTATCGCTTATTTCTAAAGATAGAATGAACTGCATACCATGAACCTCATCCTGGTTTAATAATAGCATCATATTACTTCAATGAGCCTTACCCTCTTGTTAACGAGATTGCGCTACTTAGTCTTACAACCATGGATCTCTTAAACCAGTTTGCTTACCCTTCCTTATCTGGTTACGGTAAGTTCACAATTTCCTTAACCATGAAGCGCTCTTTCGGGGAGGAGATCACATTTACGCTTTGTCAGGCTATACCCCTCACTTATATGGATTGTAAGTTAATTCCAAAAAGTGATGTCTAGGCTCATATATCTCGATATATTCTGAAATATGCAGAAGTCTATGACGGAGATTATATAGTTCGACTCATGATCCGAGTCTATATGGACAACAAAAAGAAGGAGGATAGGCCTTCTCCCTCAGAGGAGGAGAGATATAACACACTTTCTTCAATCATTGAAGGAAAATTGAGTGAGATCGAGGAGCCTATTACTGCAAGAAAGATCAAACATGGTACGCATAGTCGCTATCCAACCCATATCACAGCACTCAAACCACGGAGGAGTGAGCTGAAATCATTCATAGTTGCCGATATCGAGACTCTATATCTTGATAACATTCATAAGCCTTATGTTGCTGGTCTAATGAAGGTTTGTCCCGGTGATAAGATAAATAACAGTAGGATTTCTCACTTCTTCAGTGAAGACTACTCTATAATCTTGGATTCCTTTGAAGACAGGAGTACAAAAGTACTTTATGACTTAGTATTAAAGATCAAAAGTCTTGTTCGAAGAGAAAAATCAACTATTTACTTCCACAACTTCTCTAGATTCGATGGAATTCTCTTGCTTAAGCACCTAGCATATCATCACAAGAGCTTGAAGCTTAAACCACTGATGAGGAACAATAGGCTTTACGAGTTAGCAGTCTATTCAGGTAAGAAGATGTTATTCCGCTTCAGAGACTCCTTGAATCTACTCCCTAGCAAACTGAGCTCCCTTGGCAACAATCTTTGCCCCGATCTTGGCCCTAAAGGCTCCATCTCAATCCCATATGACAAACTGAAAGTGGAGGATCTGATTAATAATAAGAGAGAATTGTTGGATTATATGAAACAGGATATTCGTCTATTGGGTGGAGTAATGCAAAAAGCTCAAGAGATATATTGGGAGGTGTACGAGGTGGACATTGAAAGCAAGATAACCCTTCCCTCACTTGCTCTTAGCATCTTTCGTTTTAAATACTACGATGTATCTAATTTTCCAATCCACATCCCAAACAAGCATGAAGACACCTTCATAAGGCGTGCCTACTACGGAGGTCATGCAGATACATACAAGCCATATGGTGAGAACCTCTACTACTACGATGTGAACTCTCTCTATCCCTTTGTAATGAAGGAATTTCCAATGCCGGGTGGTGAACCTGTCTGGCATTCTAATCTGGAAAGCAAGGACTTAGATAGCATGTTTGGTTTTATTGAGGCATATGTGGTATGTCCGAAGACTATCAAAAAACCCTTTCTTCCCTATCGTGACAAGAATGACACTCTCCTCTTTCCAACTAGATAATTTGTTGGAGTCTACTATACCGAGGAGTTAAAGTATGCTAGAGGCCTAGGATACACCGTGCTCCCAATCTCCGGCTACCTCTTTAAGAGGATGGAAAGCCCATTCACGAGCTTTGTTAGCTCACTCTTTGAGAGCAGGTTAGAAGCGAGGAAATCAGGTAATGAAGCAATGTCCTATGTTTACAAGATACTAATGAATTCCCTATACGGAAGATTTGGCATTAACCCTAAAAGCACGACAACAGAGATCTGCGATGAATATCGATACAAAAATTTAATCAAGAATAGTGAGTTTATATTCGGCGATATGCTTAGCGAAAATACCTACATCGTTGCCTACCATAGCAATACCGAGAAGGGCGATGATTATTGGAATCCACCGAAGAACTCAGTTGTCCAACTAGCTGCTGCGATAACAGCCTCCGCTAGAATCCATATGTACCCTTATATCTCAAGAGAGGACTGCTACTATACTGACACAGACTCAGTTGTGCTTGGTCGCCCACTACCTAATGAAGAGATTTCTTCTTCTGTCTTGGGCAAGTTTAAGCTAGAGGACAGAATCATAAAAGGATACTTTTTACATCTCAACAGAAGGACAAAATGTACTCAAGTACAAGGGACTAGCGAAAAACATGATCATGCCGGAATGGTTTGAGAAACTGTACAAAAACCCATCTCATACAGAACAGGTATCGATAGAATCCAAATTCAGAATTGATTGGCACACTCTGAACATCTTCAAGAAAGACAGCCTGGTCACGCTCGGCCTTAAGCTGGGGCACAAGAGGATATCAGTATATGAAAAAGATGTATGGGTTGATACAGACCCAATTCATATAAATGACTTGTCTTCCCTAGATCACATTGGAAAATCAATTATCCAATTTCTAAGGTATGAGTTAATATAACTACAGATAGCAAATCTGACTCTAAATGATCAATTAAATCGGAAAGAAAGTGAGATTTTCGAGAGATACAAAGAGACCAAGGATGAGAATGAGAAGATGAAGGGTGATATTCCACCGACATAACCCGTTGGAGTGGGCTACATGAGGTCTGAGTCTTCGTCTTGACCTTCGGGAGACTCAGATCAAGAGTGAAATCGCAATGACTGAATCTCGCTTTAGGATAGGTGGTTTATAGAAAAGTGCTCTCATTTGCAGTGGTGGTGCATCGAAAAGTACTATCATTTTGAGTGGTGGTGTATCGACTTTTTGGTGTGGCGAATCGACTTTTGGAGTGGGACTGAATTCCGCCATTTTTGTATAATAATACACTGCTAATTACCCACATGGCTTATGAGGATTCACTCCTTCTTCCACAATTAGTATTACCCACATCAGGCCATCGTCGGGACAGCGAGGTCATTGTTGGTGATGGCCGGGATGCTTGAGAGATTCTGGGGAGAGGCAGTAATGACGGCCGTCTATCTGGTAACAGAACGGAGTGGTGGAGCGCCAAAATCAGACCATCGTCGGGACAGCGAGGTCATTGTTGGTGACGGCCGGGATGCCTGGGACAGCAAGGTCATTGTTGGTGACGACCGGGATGCCTGA

mRNA sequence

ATGTCTGATAAAATGGAAAAGTCTGAGACGTTTTCCTTCGGTGTCTTCTTACTCGAGTTTATGGAGGAGCGGGGATTGGTCAGTTCTATTGCAATGGAATCCTTTGGTAGTGGTGTTAAGAAAAAGTCGAAAGGTGGCTATTATTATGCAAGCAATCTATTCATTGTTTGTAATTTTGATGTTACTTTACTTCCGATCAAGCTCAACCTTCCTATGATATGCCCACCTCTTGATTGGAAGAGTGTGTGTCCGCGGAATCAATCTCCTAGATATCTCTCTGATCTATCAAGGGGTTACCTAAGTGGACCGACTGCATCATATTACTTCAATGAGCCTTACCCTCTTGTTAACGAGATTGCGCTACTTAGTCTTACAACCATGGATCTCTTAAACCAGTTTGCTTACCCTTCCTTATCTGGTTACGGTAAGTTCACAATTTCCTTAACCATGAAGCGCTCTTTCGGGGAGGAGATCACATTTACGCTTTGTCAGGCTATACCCCTCACTTATATGGATTAAGTCTATGACGGAGATTATATAGTTCGACTCATGATCCGAGTCTATATGGACAACAAAAAGAAGGAGGATAGGCCTTCTCCCTCAGAGGAGGAGAGATATAACACACTTTCTTCAATCATTGAAGGAAAATTGAGTGAGATCGAGGAGCCTATTACTGCAAGAAAGATCAAACATGGTACGCATAGTCGCTATCCAACCCATATCACAGCACTCAAACCACGGAGGAGTGAGCTGAAATCATTCATAGTTGCCGATATCGAGACTCTATATCTTGATAACATTCATAAGCCTTATGTTGCTGGTCTAATGAAGGTTTGTCCCGGTGATAAGATAAATAACAGTAGGATTTCTCACTTCTTCAGTGAAGACTACTCTATAATCTTGGATTCCTTTGAAGACAGGAGTACAAAAGTACTTTATGACTTAGTATTAAAGATCAAAAGTCTTGTTCGAAGAGAAAAATCAACTATTTACTTCCACAACTTCTCTAGATTCGATGGAATTCTCTTGCTTAAGCACCTAGCATATCATCACAAGAGCTTGAAGCTTAAACCACTGATGAGGAACAATAGGCTTTACGAGTTAGCAGTCTATTCAGGTAAGAAGATGTTATTCCGCTTCAGAGACTCCTTGAATCTACTCCCTAGCAAACTGAGCTCCCTTGGCAACAATCTTTGCCCCGATCTTGGCCCTAAAGGCTCCATCTCAATCCCATATGACAAACTGAAAGTGGAGGATCTGATTAATAATAAGAGAGAATTGTTGGATTATATGAAACAGGATATTCGTCTATTGGGTGGAGTAATGCAAAAAGCTCAAGAGATATATTGGGAGGTGTACGAGGTGGACATTGAAAGCAAGATAACCCTTCCCTCACTTGCTCTTAGCATCTTTCGTTTTAAATACTACGATGTATCTAATTTTCCAATCCACATCCCAAACAAGCATGAAGACACCTTCATAAGGCGTGCCTACTACGGAGGTCATGCAGATACATACAAGCCATATGGTGAGAACCTCTACTACTACGATGTGAACTCTCTCTATCCCTTTGTAATGAAGGAATTTCCAATGCCGGGTGGTGAACCTGTCTGGCATTCTAATCTGGAAAGCAAGGACTTAGATAGCATGTTTGGTTTTATTGAGGCATATGTGATACTAATGAATTCCCTATACGGAAGATTTGGCATTAACCCTAAAAGCACGACAACAGAGATCTGCGATGAATATCGATACAAAAATTTAATCAAGAATAGTGAGTTTATATTCGGCGATATGCTTAGCGAAAATACCTACATCGTTGCCTACCATAGCAATACCGAGAAGGGCGATGATTATTGGAATCCACCGAAGAACTCAGTTGTCCAACTAGCTGCTGCGATAACAGCCTCCGCTAGAATCCATATGTACCCTTATATCTCAAGAGAGGACTGCTACTATACTGACACAGACTCAGTTGTGCTTGGTCGCCCACTACCTAATGAAGAGATTTCTTCTTCTGTCTTGGGCAAGTTTAAGCTAGAGGACAGAATCATAAAAGGATACTTTTTACATCTCAACAGAAGGACAAAATAACAGGTATCGATAGAATCCAAATTCAGAATTGATTGGCACACTCTGAACATCTTCAAGAAAGACAGCCTGGTCACGCTCGGCCTTAAGCTGGGGCACAAGAGGATATCAGTATATGAAAAAGATGCCATCGTCGGGACAGCGAGGTCATTGTTGGTGATGGCCGGGATGCTTGAGAGATTCTGGGGAGAGGCAGTAATGACGGCCGTCTATCTGGTAACAGAACGGAGTGGTGGAGCGCCAAAATCAGACCATCGTCGGGACAGCGAGGTCATTGTTGGTGACGGCCGGGATGCCTGGGACAGCAAGGTCATTGTTGGTGACGACCGGGATGCCTGA

Coding sequence (CDS)

ATGATCCGAGTCTATATGGACAACAAAAAGAAGGAGGATAGGCCTTCTCCCTCAGAGGAGGAGAGATATAACACACTTTCTTCAATCATTGAAGGAAAATTGAGTGAGATCGAGGAGCCTATTACTGCAAGAAAGATCAAACATGGTACGCATAGTCGCTATCCAACCCATATCACAGCACTCAAACCACGGAGGAGTGAGCTGAAATCATTCATAGTTGCCGATATCGAGACTCTATATCTTGATAACATTCATAAGCCTTATGTTGCTGGTCTAATGAAGGTTTGTCCCGGTGATAAGATAAATAACAGTAGGATTTCTCACTTCTTCAGTGAAGACTACTCTATAATCTTGGATTCCTTTGAAGACAGGAGTACAAAAGTACTTTATGACTTAGTATTAAAGATCAAAAGTCTTGTTCGAAGAGAAAAATCAACTATTTACTTCCACAACTTCTCTAGATTCGATGGAATTCTCTTGCTTAAGCACCTAGCATATCATCACAAGAGCTTGAAGCTTAAACCACTGATGAGGAACAATAGGCTTTACGAGTTAGCAGTCTATTCAGGTAAGAAGATGTTATTCCGCTTCAGAGACTCCTTGAATCTACTCCCTAGCAAACTGAGCTCCCTTGGCAACAATCTTTGCCCCGATCTTGGCCCTAAAGGCTCCATCTCAATCCCATATGACAAACTGAAAGTGGAGGATCTGATTAATAATAAGAGAGAATTGTTGGATTATATGAAACAGGATATTCGTCTATTGGGTGGAGTAATGCAAAAAGCTCAAGAGATATATTGGGAGGTGTACGAGGTGGACATTGAAAGCAAGATAACCCTTCCCTCACTTGCTCTTAGCATCTTTCGTTTTAAATACTACGATGTATCTAATTTTCCAATCCACATCCCAAACAAGCATGAAGACACCTTCATAAGGCGTGCCTACTACGGAGGTCATGCAGATACATACAAGCCATATGGTGAGAACCTCTACTACTACGATGTGAACTCTCTCTATCCCTTTGTAATGAAGGAATTTCCAATGCCGGGTGGTGAACCTGTCTGGCATTCTAATCTGGAAAGCAAGGACTTAGATAGCATGTTTGGTTTTATTGAGGCATATGTGATACTAATGAATTCCCTATACGGAAGATTTGGCATTAACCCTAAAAGCACGACAACAGAGATCTGCGATGAATATCGATACAAAAATTTAATCAAGAATAGTGAGTTTATATTCGGCGATATGCTTAGCGAAAATACCTACATCGTTGCCTACCATAGCAATACCGAGAAGGGCGATGATTATTGGAATCCACCGAAGAACTCAGTTGTCCAACTAGCTGCTGCGATAACAGCCTCCGCTAGAATCCATATGTACCCTTATATCTCAAGAGAGGACTGCTACTATACTGACACAGACTCAGTTGTGCTTGGTCGCCCACTACCTAATGAAGAGATTTCTTCTTCTGTCTTGGGCAAGTTTAAGCTAGAGGACAGAATCATAAAAGGATACTTTTTACATCTCAACAGAAGGACAAAATAA

Protein sequence

MIRVYMDNKKKEDRPSPSEEERYNTLSSIIEGKLSEIEEPITARKIKHGTHSRYPTHITALKPRRSELKSFIVADIETLYLDNIHKPYVAGLMKVCPGDKINNSRISHFFSEDYSIILDSFEDRSTKVLYDLVLKIKSLVRREKSTIYFHNFSRFDGILLLKHLAYHHKSLKLKPLMRNNRLYELAVYSGKKMLFRFRDSLNLLPSKLSSLGNNLCPDLGPKGSISIPYDKLKVEDLINNKRELLDYMKQDIRLLGGVMQKAQEIYWEVYEVDIESKITLPSLALSIFRFKYYDVSNFPIHIPNKHEDTFIRRAYYGGHADTYKPYGENLYYYDVNSLYPFVMKEFPMPGGEPVWHSNLESKDLDSMFGFIEAYVILMNSLYGRFGINPKSTTTEICDEYRYKNLIKNSEFIFGDMLSENTYIVAYHSNTEKGDDYWNPPKNSVVQLAAAITASARIHMYPYISREDCYYTDTDSVVLGRPLPNEEISSSVLGKFKLEDRIIKGYFLHLNRRTK

Homology

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BLAST of CmaCh17G005020 vs. Swiss-Prot
Match: DPOM_MAIZE (DNA polymerase OS=Zea mays PE=3 SV=1)

HSP 1 Score: 253.1 bits (645), Expect = 6.7e-66
Identity = 155/397 (39.04%), Postives = 226/397 (56.93%), Query Frame = 1


Query: 2   IRVYMDNKKKEDRPS-PSEEERYNTLSSII--EGKLSEIEEPITARKIKHGTHSRYPTHI 61
           +R Y +     ++ S P+++E  N L   +     ++ +E P   R+ K     RY ++I
Sbjct: 153 VRAYSEGSIDLNQASIPTKDESLNYLKGALIKYSDINNLEIPKMGRRSKR----RYQSYI 212

Query: 62  TALKPRRSELKSFIVADIETLYL-------DNIHKPYVAGLMKVCPGDKINNSRISHFFS 121
              K        F VAD+ETL L       D  H PY  G M V     +N   I+ F++
Sbjct: 213 PVDKTEMKNKTLFFVADLETLLLKRRDTDVDKTHVPYAGGYMMVDMEKWVNADHITTFYA 272

Query: 122 EDYSIILDSFEDRSTKVLYDLVLKIKSLVRREKST--IYFHNFSRFDGILLLKHLAYHHK 181
            DYS +   F D S K+L +++ +I   V+R  S+  +YFHN S+FDGI++L  L   +K
Sbjct: 273 HDYSKVCQDFHDMSEKMLTEMINRIVKDVQRRGSSMVVYFHNLSQFDGIMILSFLTKSYK 332

Query: 182 SLKLKPLMRNNRLYELAVYS-----GKKMLFRFRDSLNLLPSKLSSLGNNLCPDLGPKGS 241
           +  ++P+MRN+ +Y + +Y       K+++  F DS  LL  KL+ L ++ CP+LG KGS
Sbjct: 333 NCHIEPIMRNDCIYSIKLYKVSKNGDKRLVLTFMDSYLLLKVKLADLADSFCPELGGKGS 392

Query: 242 ISIPYDKLKVEDLINNKRELLDYMKQDIRLLGGVMQKAQEIYWEVYEVDIESKITLPSLA 301
               +  + V+ L + + + L Y+KQDI +   VMQ+A+ I WE Y +DI   +T+ +LA
Sbjct: 393 FD--HQNVTVDKLPSIREDSLTYLKQDILITAAVMQRAKAIIWEEYGIDILKVLTISALA 452

Query: 302 LSIFRFKYY-DVSNFPIHIPNKHEDTFIRRAYYGGHADTYKPYGENLYYYDVNSLYPFVM 361
           L IFR  YY D  +  I+IP+ +E  FIR  YYGGH D YKPYGENLYYYDVNSLYP  M
Sbjct: 453 LKIFRRVYYKDDDDNWIYIPDDNEAQFIREGYYGGHTDVYKPYGENLYYYDVNSLYPSSM 512

Query: 362 KEFPMPGGEPVWHSNLESKD----LDSMFGFIEAYVI 377
            +  MP G+  W S+L SK     L+ MFGFI A++I
Sbjct: 513 LD-DMPIGKTRWVSDLGSKKSKIVLNDMFGFIRAFII 542

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BLAST of CmaCh17G005020 vs. Swiss-Prot
Match: DPOM_AGABT (Probable DNA polymerase (Fragment) OS=Agaricus bitorquis PE=3 SV=1)

HSP 1 Score: 109.8 bits (273), Expect = 9.2e-23
Identity = 104/367 (28.34%), Postives = 166/367 (45.23%), Query Frame = 1


Query: 75  DIETLYLDNIHKPYVAGLMKVCPGDKINNS-RISHFFSEDYSIILDSFEDRSTKVLYDLV 134
           D+ET Y DN  +  +  L     G  +N+  +  ++ + D    L+S E    K+  DL 
Sbjct: 155 DLET-YGDNCFELGLGNLNVYAGGFALNDGFKKLYYLNNDTE--LNSGEAIIKKMFGDLF 214

Query: 135 LKI-KSLVRREKSTIYFHNFSRFDGILLLKHLAYHHKSLKLKPLMRNNRLYELAVYSGKK 194
             I +    R   TIY HN  RFD + +++ L      +  +  + N+ LY   V S +K
Sbjct: 215 DYIAEDRKARNNYTIYAHNLGRFDSVFIIRSLCSEGYKINGQ-WIDNSILYLKIVDSTRK 274

Query: 195 MLFRFRDSLNLLPSKL----SSLGNNLCPDL--------------GPKGSISIPYDKLKV 254
           +  + RDS+ L+P  L    SS G N+   +              G K  I    D+ K 
Sbjct: 275 LTIKLRDSIKLVPHSLDKALSSNGCNISKGMFPHKFVNKDTLNYIGDKPDIKYYVDENKF 334

Query: 255 ED-----------LINNKRELLDYMKQDIRLLGGVMQKAQEIYWEVYEVDIESKITLPSL 314
            +           ++N K+E L+Y+ +DI  L  +M K    Y+  Y+++I    TLPS+
Sbjct: 335 NESKLKKYKSLPSILNLKKECLNYLDKDILGLLELMNKVSLTYFNEYKLNITKFSTLPSI 394

Query: 315 ALSIFRFKYYDVSNFPIHIPNKHEDTFIRRAYYGGHADTYKPYGENL----YYYDVNSLY 374
            L+IF  ++YD  N  I + N     FIR +Y+GG++D +    E L    Y+YD+NS Y
Sbjct: 395 TLNIFGIRFYDDQN-SIKMINGPLSEFIRSSYFGGNSDIFVSGEERLVKNGYHYDMNSQY 454

Query: 375 PFVMKEFPMPGGEPVWHSNLESKDLDSMFGFIEAYVILMNSLYGRFGINPKSTTTEICDE 407
           P+ M +  MP G PV+ +N +     + F F        ++L   F        + ICD 
Sbjct: 455 PYAMLQ-SMPTGNPVFSTNTDLNYYRNGFVFARVTPPSKDTLVNLFIPRRSDDGSVICDR 514

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BLAST of CmaCh17G005020 vs. Swiss-Prot
Match: DPOM_NEUIN (Probable DNA polymerase OS=Neurospora intermedia PE=3 SV=1)

HSP 1 Score: 105.1 bits (261), Expect = 2.3e-21
Identity = 86/265 (32.45%), Postives = 124/265 (46.79%), Query Frame = 1


Query: 131 DLVLKIKSLVRREKS--TIYFHNFSRFDGILLLKHLAYHHKSLKLKPLMRNNRLYELAV- 190
           +++   KS++ R+     +Y HNFS FDGI ++  L+   +  ++KP MRN ++ +L   
Sbjct: 394 EMMNAFKSIMLRKYDGYKVYTHNFSYFDGIFIIDILS---RLGEVKPFMRNGKILKLTFN 453

Query: 191 ----YSGKKMLFRFRDSLNLLPSKLSSLGN--------------------------NLCP 250
                S +K    F DSL +LP  L  L N                            CP
Sbjct: 454 FTLPNSKRKYTLYFMDSLLILPDSLDKLSNFFNNKVKKLFFPHSFLDDNTIPINYVGKCP 513

Query: 251 DLG--PKG---SISIPYDKLKVEDLINN----KRELLDYMKQDIRLLGGVMQKAQEIYWE 310
           D    PK      +I   +       NN    K+EL+ Y + D   L  V+   Q   +E
Sbjct: 514 DYKYFPKAYTEDFTIEQYQEYANKFKNNNWDLKKELIKYCEIDTIALYQVLVSFQRKIYE 573

Query: 311 VYEVDIESKITLPSLALSIFRFKYYDVSNFPIHIPNKHEDTFIRRAYYGGHADTYKPYGE 354
            + +D     T+PSLA +IFR KY      P +I +K  +  I+ +Y+GG  + YKP+G 
Sbjct: 574 KFMIDCTKYPTIPSLAFAIFRKKYLVEDMIP-NIKSKLHN-IIKLSYFGGICELYKPFGV 633

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BLAST of CmaCh17G005020 vs. Swiss-Prot
Match: DPOM_PODAS (Probable DNA polymerase OS=Podospora anserina PE=3 SV=1)

HSP 1 Score: 97.1 bits (240), Expect = 6.2e-19
Identity = 73/247 (29.55%), Postives = 118/247 (47.77%), Query Frame = 1


Query: 172 KLKPLMRNNRLYELAVY----SGKKMLFRFRDSLNLLPSKLSSLGNNLCPDLGPKGSISI 231
           ++  ++R++R+ +  +     SG   +  F DS N+LP KL +L  +   ++  KG    
Sbjct: 482 EISTILRDDRILKCVIKVKTPSGYNKI-TFIDSYNILPDKLDNLAKSFGTEI-QKGLF-- 541

Query: 232 PYDKLKVEDL-------------INN------------------KRELLDYMKQDIRLLG 291
           PY+ +K   L             INN                  +++ L Y+++D+  L 
Sbjct: 542 PYEFVKSNTLNYVGITPSIEYYKINNEVISQELYNELIVPQWDLRKQTLHYLERDLLSLL 601

Query: 292 GVMQKAQEIYWEVYEVDIESKITLPSLALSIFRFKYYDVSNFPIHIPNKHEDTFIRRAYY 351
            ++       ++ Y V +   +T+  LAL+I+  +Y   +  P+ + N    T I+ AYY
Sbjct: 602 EIINTYNHYVYKRYNVQLTESLTIARLALNIYLKRYLGDNLIPV-VLNNSLFTSIKAAYY 661

Query: 352 GGHADTYKPYGENLYYYDVNSLYPFVMKEFPMPGGEPVWHSNLESKDLDSMFGFIEAYVI 384
           GG A+ Y+PYG+NL YYDVNSLYPFV K   MPG E  +  + +   L  +FGF    V 
Sbjct: 662 GGVAEVYRPYGKNLRYYDVNSLYPFVAKN-TMPGHECKYIESKKGLKLSELFGFFYCKVT 721

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BLAST of CmaCh17G005020 vs. Swiss-Prot
Match: DPOM_ASCIM (Probable DNA polymerase OS=Ascobolus immersus PE=3 SV=1)

HSP 1 Score: 90.5 bits (223), Expect = 5.8e-17
Identity = 91/354 (25.71%), Postives = 154/354 (43.50%), Query Frame = 1


Query: 62  KPRRSELKSFIVADIETLYLDNIHKPYVAGLMKVCPGDKINNSRISHFFSEDYSIILDSF 121
           K +   LKS    D+ET    N        L+ +C     NN +++ F  +D        
Sbjct: 533 KNKTVNLKSISTLDLETRMDTNNR------LIPICMS-YYNNKKLNTFLFKD-------- 592

Query: 122 EDRSTKVLYDLVLKIKSLVRREKSTIYFHNFSRFDGILLLKHLAYHHKSLKLKPLMRNNR 181
            D   ++L      +KS    +K   Y HN + FD + +L  L+   K  K+  +MR+++
Sbjct: 593 -DWQEEMLAAFKTLLKSTNHGKK--FYVHNLAHFDSVFILDTLS---KLGKIDIIMRDDK 652

Query: 182 LYELAV---YSGKKMLFR--FRDSLNLLPSKLSSLGN--------NLCPDLGPKGSISIP 241
           + +L +     GK   +   F DSL +LP+ L +L          ++ P     G+++ P
Sbjct: 653 IMKLKITFKIPGKNTEYSISFLDSLLMLPNSLDNLSKAFNIENKKSVFPLKFTNGAVT-P 712

Query: 242 YD------------------------KLKVEDLINN---KRELLDYMKQDIRLLGGVMQK 301
           ++                        K   +D  NN    +EL +Y + D   L  ++  
Sbjct: 713 FNYIGAVPGYEYFYNTPNKKFTKDDYKKYCKDFNNNWDFNKELKNYCEIDCLALHDILTL 772

Query: 302 AQEIYWEVYEVDIESKITLPSLALSIFRFKYYDVSNFPIHIPNKHEDTFIRRAYYGGHAD 361
             ++    + VDI   ++L S+  +IFR  +   +  P +I        +++AY GG+ D
Sbjct: 773 FAKMIHNEFSVDITRYVSLSSITFAIFRTNFLPENKIP-NITCTKLHYILKQAYTGGYCD 832

Query: 362 TYKPYGENLYYYDVNSLYPFVMKEFPMPGGEPVWHSNLESKDLDSMFGFIEAYV 376
            +KP G+N++ YD+NSLYP  M +F MP G P+       K     FGF+ A V
Sbjct: 833 VFKPEGKNIHSYDINSLYPSAMAKFDMPTGTPLHILGDPYKFTKDPFGFVFAEV 863

[Close]

BLAST of CmaCh17G005020 vs. TrEMBL
Match: K7MCC3_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1)

HSP 1 Score: 379.8 bits (974), Expect = 5.3e-102
Identity = 205/387 (52.97%), Postives = 264/387 (68.22%), Query Frame = 1


Query: 1   MIRVYMDNKKKEDRPSP----SEEERYNTLSSIIEGKLSEIEEPITARKIKHGTHSRYPT 60
           ++R+ +    +E+ P P     EE     LS  I+    EI+      K    T  +YP 
Sbjct: 146 VVRIAIRAHFEENIPGPLQPLKEELLEEALSECIKPSSGEIDISNLPVKSLSSTSRKYPK 205

Query: 61  HITALKPRRS---ELKSFIVADIETLYLDNI-HKPYVAGLMKVCPGDKINN-SRISHFFS 120
           +IT   PR+S    L+ F+VAD ET+   N  H PY  G+M V PG  ++   RI  +FS
Sbjct: 206 NITV--PRKSGNISLRPFLVADTETIINKNSQHVPYAVGVMVVNPGIPVSRRERIDTYFS 265

Query: 121 EDYSI-ILDSFEDRSTKVLYDLVLKIKSLVRREKS--TIYFHNFSRFDGILLLKHLAYHH 180
           EDYS  +  +FE+RS ++L   + ++ ++ R+ +S  TIYFHN  RFDGI LLKHLA +H
Sbjct: 266 EDYSSRVFPTFEERSCQMLKSFIFRVAAITRQNRSAKTIYFHNLGRFDGIFLLKHLALYH 325

Query: 181 KSLKLKPLMRNNRLYELAVYSGKKMLFRFRDSLNLLPSKLSSLGNNLCPDLGPKGSISIP 240
            +  + PLMR+NRLYE+AVYS K++LF FRDSL+LLP KL  L  NLCP+LG KGSIS  
Sbjct: 326 PNYTVTPLMRDNRLYEVAVYSKKRLLFTFRDSLHLLPGKLDDLAKNLCPELGSKGSIS-- 385

Query: 241 YDKLKVEDLINNKRELLDYMKQDIRLLGGVMQKAQEIYWEVYEVDIESKITLPSLALSIF 300
           Y+ +++E L   K  LL+YM+QDI LLGG+MQ  Q+IY++ Y+ DI +K+T+ SLALS+F
Sbjct: 386 YEDVRLESLSIMKESLLEYMEQDILLLGGIMQSFQDIYYKAYQADIVNKLTIASLALSLF 445

Query: 301 RFKYYDVSNFPIHIPNKHEDTFIRRAYYGGHADTYKPYGENLYYYDVNSLYPFVMKEFPM 360
           R KYYD +   IHIPN++EDTFIRR YYGGH D Y PYG NLYYYDVNSLYPFVMKEF M
Sbjct: 446 REKYYDYNKHRIHIPNQNEDTFIRRGYYGGHTDAYLPYGTNLYYYDVNSLYPFVMKEFSM 505

Query: 361 PGGEPVWHSNLESKDLDSMFGFIEAYV 376
           PGG PVWHS+LE   LD+MFGFIEAYV
Sbjct: 506 PGGTPVWHSDLEYMTLDNMFGFIEAYV 528

[Close]

BLAST of CmaCh17G005020 vs. TrEMBL
Match: A0A0R0G3N8_SOYBN (DNA polymerase OS=Glycine max GN=GLYMA_15G187700 PE=3 SV=1)

HSP 1 Score: 377.9 bits (969), Expect = 2.0e-101
Identity = 205/387 (52.97%), Postives = 264/387 (68.22%), Query Frame = 1


Query: 1   MIRVYMDNKKKEDRPSP----SEEERYNTLSSIIEGKLSEIEEPITARKIKHGTHSRYPT 60
           ++R+ +    +E+ P P     EE     LS  I+    EI+      K    T  +YP 
Sbjct: 146 VVRIAIRAHFEENIPGPLQPLKEELLEEALSECIKPSSGEIDISNLPVKSLSSTSRKYPK 205

Query: 61  HITALKPRRS---ELKSFIVADIETLYLDNI-HKPYVAGLMKVCPGDKINN-SRISHFFS 120
           +IT   PR+S    L+ F+VAD ET+   N  H PY  G+M V PG  ++   RI  +FS
Sbjct: 206 NITV--PRKSGNISLRPFLVADTETIINKNSQHVPYAVGVMVVNPGIPVSRRERIDTYFS 265

Query: 121 EDYSI-ILDSFEDRSTKVLYDLVLKIKSLVRREKS--TIYFHNFSRFDGILLLKHLAYHH 180
           EDYS  I  +FE+RS ++L   + ++ ++ R+ +S  TIYFHN  RFDGI LLKHLA +H
Sbjct: 266 EDYSSRIFPTFEERSCQMLKSFIFRVAAITRQNRSAKTIYFHNLGRFDGIFLLKHLALYH 325

Query: 181 KSLKLKPLMRNNRLYELAVYSGKKMLFRFRDSLNLLPSKLSSLGNNLCPDLGPKGSISIP 240
            +  + PLMR+NRLYE+AVYS K++LF FRDSL+LLP KL  L  NLCP+LG KGSIS  
Sbjct: 326 PNYTVTPLMRDNRLYEVAVYSKKRLLFTFRDSLHLLPGKLDDLAKNLCPELGSKGSIS-- 385

Query: 241 YDKLKVEDLINNKRELLDYMKQDIRLLGGVMQKAQEIYWEVYEVDIESKITLPSLALSIF 300
           Y+ +++E L   K  LL+YM+QDI LLGG+MQ  Q+IY++ Y+ DI +K+T+ SLALS+F
Sbjct: 386 YEDVRLESLSIMKESLLEYMEQDILLLGGIMQSFQDIYYKAYQADIVNKLTIASLALSLF 445

Query: 301 RFKYYDVSNFPIHIPNKHEDTFIRRAYYGGHADTYKPYGENLYYYDVNSLYPFVMKEFPM 360
           R KYYD +   IHIPN++EDTFIRR YYGGH D Y PYG NLYYYDVNSLYPFV+KEF M
Sbjct: 446 REKYYDYNKHRIHIPNQNEDTFIRRGYYGGHTDAYLPYGTNLYYYDVNSLYPFVIKEFSM 505

Query: 361 PGGEPVWHSNLESKDLDSMFGFIEAYV 376
           PGG PVWHS+LE   LD+MFGFIEAYV
Sbjct: 506 PGGIPVWHSDLEYMTLDNMFGFIEAYV 528

[Close]

BLAST of CmaCh17G005020 vs. TrEMBL
Match: E1AB36_SILLA (DNA polymerase OS=Silene latifolia GN=dpo PE=4 SV=1)

HSP 1 Score: 377.1 bits (967), Expect = 3.4e-101
Identity = 189/384 (49.22%), Postives = 258/384 (67.19%), Query Frame = 1


Query: 2   IRVYMDNKKKEDRPSPSEEERYNTLSSIIEGKLSEIEEPITARKIK----HGTHSRYPTH 61
           I VY ++  K+  P    + R   +      K  + +E +  + +K      T   Y TH
Sbjct: 205 INVYFEHNIKQPIPIVDYKSRLEGIYECYYEKSHDDDEKVDVKNLKPKSLRSTKKVYSTH 264

Query: 62  ITAL-KPRRSELKSFIVADIETLYLDNIHKPYVAGLMKVCPGDKINNSRISHFFSEDYSI 121
           IT L K +++ LK F+VAD ETL +++IH PY  G++KV PGD      I  FFSEDY+ 
Sbjct: 265 ITTLNKYKKTSLKPFMVADTETLLIEDIHVPYAIGVLKVYPGDVPLVENIDSFFSEDYNK 324

Query: 122 -ILDSFEDRSTKVLYDLVLKIKSLVRREKS----TIYFHNFSRFDGILLLKHLAYHHKSL 181
            +   FEDRS K+++D + +IK++ RR K      IYFHN  RFDG+ L+KHL+ HH+ L
Sbjct: 325 EMFPKFEDRSEKMMFDFIFRIKTIARRNKKYKMDIIYFHNLGRFDGLFLIKHLSLHHQDL 384

Query: 182 KLKPLMRNNRLYELAVYSGKKMLFRFRDSLNLLPSKLSSLGNNLCPDLGPKGSISIPYDK 241
           K+K L+RN  +YE+AVYS K++LFRFRDSL+LLP+ L SL  NLCP+ G KGS+   + K
Sbjct: 385 KIKALIRNYTIYEIAVYSKKRLLFRFRDSLHLLPNDLQSLAKNLCPEYGSKGSVD--FSK 444

Query: 242 LKVEDLINNKRELLDYMKQDIRLLGGVMQKAQEIYWEVYEVDIESKITLPSLALSIFRFK 301
           + +E + + K  L+ YMKQDIRLLGG+M K Q  Y+  Y+ DI  K+T PS ALS+FR  
Sbjct: 445 VTLETISSMKETLISYMKQDIRLLGGIMLKFQNFYFLAYQADILDKLTTPSHALSLFRSW 504

Query: 302 YYDVSNFPIHIPNKHEDTFIRRAYYGGHADTYKPYGENLYYYDVNSLYPFVMKEFPMPGG 361
           +Y+     IHIP+++ D +IRR YYGGH D Y PYG++LYYYDVNSLYP++M+E+PMPGG
Sbjct: 505 FYNDKKHYIHIPDENTDNYIRRGYYGGHTDAYLPYGKDLYYYDVNSLYPYIMREYPMPGG 564

Query: 362 EPVWHSNLESKDLDSMFGFIEAYV 376
           +PVWHS+ E  DLD +FGFIEAY+
Sbjct: 565 KPVWHSDFEKMDLDEIFGFIEAYI 586

[Close]

BLAST of CmaCh17G005020 vs. TrEMBL
Match: A0A101LW89_PICGL (DNA polymerase OS=Picea glauca GN=dpo PE=3 SV=1)

HSP 1 Score: 367.5 bits (942), Expect = 2.7e-98
Identity = 175/312 (56.09%), Postives = 233/312 (74.68%), Query Frame = 1


Query: 71  FIVADIETLYLDNIHKPYVAGLMKVCPGDKINNSRISHFFSEDYSIILDSFEDRSTKVLY 130
           F+VAD ET+ +D +H PY AG + V PG+ ++N  I   FSED   +L SFEDRS K+LY
Sbjct: 3   FLVADTETVLVDGVHVPYAAGFLPVYPGEDVDNYSIYTEFSEDSLSVLPSFEDRSDKMLY 62

Query: 131 DLVLKIKSLVRREK-STIYFHNFSRFDGILLLKHLAYHHKSLKLKPLMRNNRLYELAVYS 190
           D + ++  +  + K   +YFHN SRFDGILL+K  A H  +  +KPLMRN RLYEL V  
Sbjct: 63  DFLERLARVAEKYKIPMVYFHNLSRFDGILLMKFYAKHGNTYSIKPLMRNLRLYELVVSR 122

Query: 191 GKKMLFRFRDSLNLLPSKLSSLGNNLCPDLGPKGSISIPYDKLKVEDLINNKRELLDYMK 250
           G K++ R RDSL LLP  L +L   LCP LG KGSI  P+++++VE L N + +LL+Y+K
Sbjct: 123 GNKVVLRLRDSLALLPGSLDTLAKTLCPQLGGKGSI--PHEEIQVETLENRRDQLLEYLK 182

Query: 251 QDIRLLGGVMQKAQEIYWEVYEVDIESKITLPSLALSIFRFKYYDVSNFPIHIPNKHEDT 310
           QDIRLLGGVM KAQEIYW  ++VDI   +T+ SLA+ I+R  +YD ++FPIH+P+K+EDT
Sbjct: 183 QDIRLLGGVMLKAQEIYWTQFKVDIVKCLTVSSLAMKIYRMSFYDPNSFPIHLPSKNEDT 242

Query: 311 FIRRAYYGGHADTYKPYGENLYYYDVNSLYPFVMKEFPMPGGEPVWHSNLESKDLDSMFG 370
           FIRR YYGGH+D Y PYGENLYYYDVNSLYP++MK F MPGG+PVWH +L+S++L +++G
Sbjct: 243 FIRRGYYGGHSDMYIPYGENLYYYDVNSLYPYIMKTFNMPGGKPVWHGDLQSQELSNLYG 302

Query: 371 FIEAYVILMNSL 382
           FIEAYV+  +++
Sbjct: 303 FIEAYVVCPSTI 312

[Close]

BLAST of CmaCh17G005020 vs. TrEMBL
Match: Q5U692_BETVU (Orf774 protein OS=Beta vulgaris subsp. vulgaris GN=orf774 PE=4 SV=1)

HSP 1 Score: 359.0 bits (920), Expect = 9.7e-96
Identity = 183/362 (50.55%), Postives = 239/362 (66.02%), Query Frame = 1


Query: 54  YPTHITALKPRRSELKSFIVADIETLYLDN---------------------------IHK 113
           YPT IT+LK     +  F+VAD ET+  D                            +H 
Sbjct: 32  YPTRITSLKNSAKGMTPFLVADTETILYDGMDLDPISRDKFFMGLDPTPFDKDKKVEVHS 91

Query: 114 PYVAGLMKVCPGDKINNSRISHFFSEDY-SIILDSFEDRSTKVLYDLVLKIKSLVRR--E 173
           P+  G+M V P   +N S I +++S DY   I  +  +RSTK+L D + +I S+++   E
Sbjct: 92  PFAIGVMIVRPYVPVNESNIDYYYSSDYPDKIFPTHMERSTKLLSDFIRRIISIIKMNPE 151

Query: 174 KSTIYFHNFSRFDGILLLKHLAYHHKSLKLKPLMRNNRLYELAVYSGKKMLFRFRDSLNL 233
             T+YFHNFSRFDGIL+L+HL  H+   +++PLMRN RLYE+ VY  K+MLFRFRDSLNL
Sbjct: 152 IQTVYFHNFSRFDGILILRHLVLHNDEYEIRPLMRNGRLYEVVVYFKKRMLFRFRDSLNL 211

Query: 234 LPSKLSSLGNNLCPDLGPKGSISIPYDKLKVEDLINNKRELLDYMKQDIRLLGGVMQKAQ 293
           LP  L  L +NLCP+LG KGS    +  + +E++   +  +++YMKQDIRLLGGVMQKAQ
Sbjct: 212 LPGSLDYLSSNLCPELGNKGSFD--HSSMNLENVKKKRDVVIEYMKQDIRLLGGVMQKAQ 271

Query: 294 EIYWEVYEVDIESKITLPSLALSIFRFKYYDVSNFPIHIPNKHEDTFIRRAYYGGHADTY 353
           +IYW ++EVD+   IT+ S AL IFR  +++  +F IHIPN++EDTFIRR YYGGHAD Y
Sbjct: 272 DIYWNLFEVDLVDWITVASQALGIFRMNFFNDMDFHIHIPNRNEDTFIRRGYYGGHADAY 331

Query: 354 KPYGENLYYYDVNSLYPFVMKEFPMPGGEPVWHSNLESKDLDSMFGFIEAYVILMNSLYG 386
            P G NLYYYDVNSLYPF+MKE+PMP G+PVW SNL   DLDS++GFIEAYV    S+  
Sbjct: 332 IPKGTNLYYYDVNSLYPFIMKEYPMPSGKPVWASNLGGMDLDSLYGFIEAYVECPESIVR 391

[Close]

BLAST of CmaCh17G005020 vs. NCBI nr
Match: gi|1021467527|ref|XP_016182637.1| (PREDICTED: DNA polymerase-like [Arachis ipaensis])

HSP 1 Score: 442.6 bits (1137), Expect = 9.5e-121
Identity = 235/396 (59.34%), Postives = 285/396 (71.97%), Query Frame = 1


Query: 2   IRVYMDNKKKEDRPSPSEEERYNTLSSIIEGKLSEIEEPITARKIKHGTHSRYPTHITAL 61
           IRVYMD  KK DR S S +ER   LSS+   +L   E    AR+I++     Y ++IT +
Sbjct: 112 IRVYMDGTKK-DRKSLSNDERCILLSSLCSVELGAREP---AREIRNRQKHSYLSYITKM 171

Query: 62  KPRRSELKSFIVADIETLYL---------------DNIHKPYVAGLMKVCPGDKINNSRI 121
                 LK F+V DIET+ +               + +HKPY AGLM V P D I    +
Sbjct: 172 NASSKPLKPFLVGDIETVLMKEVHKPFGDSDTVLMNEVHKPYAAGLMLVRPNDAIGQISM 231

Query: 122 SH---FFSEDYSIILDSFEDRSTKVLYDLVLKIKSLVRREKS--TIYFHNFSRFDGILLL 181
            H   +FSEDY II+ SFEDRS KVL DLVL+I +LVR   +  T+YFHNFSRFDGILLL
Sbjct: 232 KHIDTYFSEDYDIIIHSFEDRSQKVLNDLVLRISALVRENNTYLTVYFHNFSRFDGILLL 291

Query: 182 KHLAYHHKSLKLKPLMRNNRLYELAVYS--GKKMLFRFRDSLNLLPSKLSSLGNNLCPDL 241
           KHLA HH + KLKPLMRNNRLYE+AVYS   KK+LFRFRDSL+ LP KL +L  +LCPDL
Sbjct: 292 KHLACHHTNYKLKPLMRNNRLYEIAVYSVSSKKLLFRFRDSLHHLPGKLDNLAKSLCPDL 351

Query: 242 GPKGSISIPYDKLKVEDLINNKRELLDYMKQDIRLLGGVMQKAQEIYWEVYEVDIESKIT 301
           G KG+I  PYD+++  +L   K +LLDYMKQDIRLLGGVM++AQEIYW  Y++DI+S IT
Sbjct: 352 GRKGTI--PYDEVRQSNLKEMKSQLLDYMKQDIRLLGGVMRRAQEIYWSQYKIDIDSVIT 411

Query: 302 LPSLALSIFRFKYYDVSNFPIHIPNKHEDTFIRRAYYGGHADTYKPYGENLYYYDVNSLY 361
           L +LAL+IFR K+YD + +PIHIP K+ED FIR+AYYGGH D Y PYGENLYYYDVNSLY
Sbjct: 412 LSALALTIFRMKFYDPTVWPIHIPTKNEDNFIRKAYYGGHTDAYIPYGENLYYYDVNSLY 471

Query: 362 PFVMKEFPMPGGEPVWHSNLESKDLDSMFGFIEAYV 376
           PF+MKE+ MPGG PVWH NL  KDLDS++GFI+AYV
Sbjct: 472 PFIMKEYDMPGGTPVWHGNLAGKDLDSLYGFIDAYV 501

[Close]

BLAST of CmaCh17G005020 vs. NCBI nr
Match: gi|955371647|ref|XP_014623435.1| (PREDICTED: DNA polymerase-like [Glycine max])

HSP 1 Score: 377.9 bits (969), Expect = 2.9e-101
Identity = 205/387 (52.97%), Postives = 264/387 (68.22%), Query Frame = 1


Query: 1   MIRVYMDNKKKEDRPSP----SEEERYNTLSSIIEGKLSEIEEPITARKIKHGTHSRYPT 60
           ++R+ +    +E+ P P     EE     LS  I+    EI+      K    T  +YP 
Sbjct: 146 VVRIAIRAHFEENIPGPLQPLKEELLEEALSECIKPSSGEIDISNLPVKSLSSTSRKYPK 205

Query: 61  HITALKPRRS---ELKSFIVADIETLYLDNI-HKPYVAGLMKVCPGDKINN-SRISHFFS 120
           +IT   PR+S    L+ F+VAD ET+   N  H PY  G+M V PG  ++   RI  +FS
Sbjct: 206 NITV--PRKSGNISLRPFLVADTETIINKNSQHVPYAVGVMVVNPGIPVSRRERIDTYFS 265

Query: 121 EDYSI-ILDSFEDRSTKVLYDLVLKIKSLVRREKS--TIYFHNFSRFDGILLLKHLAYHH 180
           EDYS  I  +FE+RS ++L   + ++ ++ R+ +S  TIYFHN  RFDGI LLKHLA +H
Sbjct: 266 EDYSSRIFPTFEERSCQMLKSFIFRVAAITRQNRSAKTIYFHNLGRFDGIFLLKHLALYH 325

Query: 181 KSLKLKPLMRNNRLYELAVYSGKKMLFRFRDSLNLLPSKLSSLGNNLCPDLGPKGSISIP 240
            +  + PLMR+NRLYE+AVYS K++LF FRDSL+LLP KL  L  NLCP+LG KGSIS  
Sbjct: 326 PNYTVTPLMRDNRLYEVAVYSKKRLLFTFRDSLHLLPGKLDDLAKNLCPELGSKGSIS-- 385

Query: 241 YDKLKVEDLINNKRELLDYMKQDIRLLGGVMQKAQEIYWEVYEVDIESKITLPSLALSIF 300
           Y+ +++E L   K  LL+YM+QDI LLGG+MQ  Q+IY++ Y+ DI +K+T+ SLALS+F
Sbjct: 386 YEDVRLESLSIMKESLLEYMEQDILLLGGIMQSFQDIYYKAYQADIVNKLTIASLALSLF 445

Query: 301 RFKYYDVSNFPIHIPNKHEDTFIRRAYYGGHADTYKPYGENLYYYDVNSLYPFVMKEFPM 360
           R KYYD +   IHIPN++EDTFIRR YYGGH D Y PYG NLYYYDVNSLYPFV+KEF M
Sbjct: 446 REKYYDYNKHRIHIPNQNEDTFIRRGYYGGHTDAYLPYGTNLYYYDVNSLYPFVIKEFSM 505

Query: 361 PGGEPVWHSNLESKDLDSMFGFIEAYV 376
           PGG PVWHS+LE   LD+MFGFIEAYV
Sbjct: 506 PGGIPVWHSDLEYMTLDNMFGFIEAYV 528

[Close]

BLAST of CmaCh17G005020 vs. NCBI nr
Match: gi|307101748|ref|YP_003875487.1| (DNA polymerase (mitochondrion) [Silene latifolia])

HSP 1 Score: 377.1 bits (967), Expect = 4.9e-101
Identity = 189/384 (49.22%), Postives = 258/384 (67.19%), Query Frame = 1


Query: 2   IRVYMDNKKKEDRPSPSEEERYNTLSSIIEGKLSEIEEPITARKIK----HGTHSRYPTH 61
           I VY ++  K+  P    + R   +      K  + +E +  + +K      T   Y TH
Sbjct: 205 INVYFEHNIKQPIPIVDYKSRLEGIYECYYEKSHDDDEKVDVKNLKPKSLRSTKKVYSTH 264

Query: 62  ITAL-KPRRSELKSFIVADIETLYLDNIHKPYVAGLMKVCPGDKINNSRISHFFSEDYSI 121
           IT L K +++ LK F+VAD ETL +++IH PY  G++KV PGD      I  FFSEDY+ 
Sbjct: 265 ITTLNKYKKTSLKPFMVADTETLLIEDIHVPYAIGVLKVYPGDVPLVENIDSFFSEDYNK 324

Query: 122 -ILDSFEDRSTKVLYDLVLKIKSLVRREKS----TIYFHNFSRFDGILLLKHLAYHHKSL 181
            +   FEDRS K+++D + +IK++ RR K      IYFHN  RFDG+ L+KHL+ HH+ L
Sbjct: 325 EMFPKFEDRSEKMMFDFIFRIKTIARRNKKYKMDIIYFHNLGRFDGLFLIKHLSLHHQDL 384

Query: 182 KLKPLMRNNRLYELAVYSGKKMLFRFRDSLNLLPSKLSSLGNNLCPDLGPKGSISIPYDK 241
           K+K L+RN  +YE+AVYS K++LFRFRDSL+LLP+ L SL  NLCP+ G KGS+   + K
Sbjct: 385 KIKALIRNYTIYEIAVYSKKRLLFRFRDSLHLLPNDLQSLAKNLCPEYGSKGSVD--FSK 444

Query: 242 LKVEDLINNKRELLDYMKQDIRLLGGVMQKAQEIYWEVYEVDIESKITLPSLALSIFRFK 301
           + +E + + K  L+ YMKQDIRLLGG+M K Q  Y+  Y+ DI  K+T PS ALS+FR  
Sbjct: 445 VTLETISSMKETLISYMKQDIRLLGGIMLKFQNFYFLAYQADILDKLTTPSHALSLFRSW 504

Query: 302 YYDVSNFPIHIPNKHEDTFIRRAYYGGHADTYKPYGENLYYYDVNSLYPFVMKEFPMPGG 361
           +Y+     IHIP+++ D +IRR YYGGH D Y PYG++LYYYDVNSLYP++M+E+PMPGG
Sbjct: 505 FYNDKKHYIHIPDENTDNYIRRGYYGGHTDAYLPYGKDLYYYDVNSLYPYIMREYPMPGG 564

Query: 362 EPVWHSNLESKDLDSMFGFIEAYV 376
           +PVWHS+ E  DLD +FGFIEAY+
Sbjct: 565 KPVWHSDFEKMDLDEIFGFIEAYI 586

[Close]

BLAST of CmaCh17G005020 vs. NCBI nr
Match: gi|973603353|gb|KUM46512.1| (DNA polymerase (mitochondrion) [Picea glauca])

HSP 1 Score: 367.5 bits (942), Expect = 3.9e-98
Identity = 175/312 (56.09%), Postives = 233/312 (74.68%), Query Frame = 1


Query: 71  FIVADIETLYLDNIHKPYVAGLMKVCPGDKINNSRISHFFSEDYSIILDSFEDRSTKVLY 130
           F+VAD ET+ +D +H PY AG + V PG+ ++N  I   FSED   +L SFEDRS K+LY
Sbjct: 3   FLVADTETVLVDGVHVPYAAGFLPVYPGEDVDNYSIYTEFSEDSLSVLPSFEDRSDKMLY 62

Query: 131 DLVLKIKSLVRREK-STIYFHNFSRFDGILLLKHLAYHHKSLKLKPLMRNNRLYELAVYS 190
           D + ++  +  + K   +YFHN SRFDGILL+K  A H  +  +KPLMRN RLYEL V  
Sbjct: 63  DFLERLARVAEKYKIPMVYFHNLSRFDGILLMKFYAKHGNTYSIKPLMRNLRLYELVVSR 122

Query: 191 GKKMLFRFRDSLNLLPSKLSSLGNNLCPDLGPKGSISIPYDKLKVEDLINNKRELLDYMK 250
           G K++ R RDSL LLP  L +L   LCP LG KGSI  P+++++VE L N + +LL+Y+K
Sbjct: 123 GNKVVLRLRDSLALLPGSLDTLAKTLCPQLGGKGSI--PHEEIQVETLENRRDQLLEYLK 182

Query: 251 QDIRLLGGVMQKAQEIYWEVYEVDIESKITLPSLALSIFRFKYYDVSNFPIHIPNKHEDT 310
           QDIRLLGGVM KAQEIYW  ++VDI   +T+ SLA+ I+R  +YD ++FPIH+P+K+EDT
Sbjct: 183 QDIRLLGGVMLKAQEIYWTQFKVDIVKCLTVSSLAMKIYRMSFYDPNSFPIHLPSKNEDT 242

Query: 311 FIRRAYYGGHADTYKPYGENLYYYDVNSLYPFVMKEFPMPGGEPVWHSNLESKDLDSMFG 370
           FIRR YYGGH+D Y PYGENLYYYDVNSLYP++MK F MPGG+PVWH +L+S++L +++G
Sbjct: 243 FIRRGYYGGHSDMYIPYGENLYYYDVNSLYPYIMKTFNMPGGKPVWHGDLQSQELSNLYG 302

Query: 371 FIEAYVILMNSL 382
           FIEAYV+  +++
Sbjct: 303 FIEAYVVCPSTI 312

[Close]

BLAST of CmaCh17G005020 vs. NCBI nr
Match: gi|9838405|ref|NP_064018.1| (orf409 gene product (mitochondrion) [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 359.0 bits (920), Expect = 1.4e-95
Identity = 183/362 (50.55%), Postives = 239/362 (66.02%), Query Frame = 1


Query: 54  YPTHITALKPRRSELKSFIVADIETLYLDN---------------------------IHK 113
           YPT IT+LK     +  F+VAD ET+  D                            +H 
Sbjct: 32  YPTRITSLKNSAKGMTPFLVADTETILYDGMDLDPISRDKFFMGLDPTPFDKDKKVEVHS 91

Query: 114 PYVAGLMKVCPGDKINNSRISHFFSEDY-SIILDSFEDRSTKVLYDLVLKIKSLVRR--E 173
           P+  G+M V P   +N S I +++S DY   I  +  +RSTK+L D + +I S+++   E
Sbjct: 92  PFAIGVMIVRPYVPVNESNIDYYYSSDYPDKIFPTHMERSTKLLSDFIRRIISIIKMNPE 151

Query: 174 KSTIYFHNFSRFDGILLLKHLAYHHKSLKLKPLMRNNRLYELAVYSGKKMLFRFRDSLNL 233
             T+YFHNFSRFDGIL+L+HL  H+   +++PLMRN RLYE+ VY  K+MLFRFRDSLNL
Sbjct: 152 IQTVYFHNFSRFDGILILRHLVLHNDEYEIRPLMRNGRLYEVVVYFKKRMLFRFRDSLNL 211

Query: 234 LPSKLSSLGNNLCPDLGPKGSISIPYDKLKVEDLINNKRELLDYMKQDIRLLGGVMQKAQ 293
           LP  L  L +NLCP+LG KGS    +  + +E++   +  +++YMKQDIRLLGGVMQKAQ
Sbjct: 212 LPGSLDYLSSNLCPELGNKGSFD--HSSMNLENVKKKRDVVIEYMKQDIRLLGGVMQKAQ 271

Query: 294 EIYWEVYEVDIESKITLPSLALSIFRFKYYDVSNFPIHIPNKHEDTFIRRAYYGGHADTY 353
           +IYW ++EVD+   IT+ S AL IFR  +++  +F IHIPN++EDTFIRR YYGGHAD Y
Sbjct: 272 DIYWNLFEVDLVDWITVASQALGIFRMNFFNDMDFHIHIPNRNEDTFIRRGYYGGHADAY 331

Query: 354 KPYGENLYYYDVNSLYPFVMKEFPMPGGEPVWHSNLESKDLDSMFGFIEAYVILMNSLYG 386
            P G NLYYYDVNSLYPF+MKE+PMP G+PVW SNL   DLDS++GFIEAYV    S+  
Sbjct: 332 IPKGTNLYYYDVNSLYPFIMKEYPMPSGKPVWASNLGGMDLDSLYGFIEAYVECPESIVR 391

The following BLAST results are available for this feature:

BLAST of CmaCh17G005020 vs. Swiss-Prot


Match Name	E-value	Identity	Description
DPOM_MAIZE	6.7e-66	39.04	DNA polymerase OS=Zea mays PE=3 SV=1	[more]
DPOM_AGABT	9.2e-23	28.34	Probable DNA polymerase (Fragment) OS=Agaricus bitorquis PE=3 SV=1	[more]
DPOM_NEUIN	2.3e-21	32.45	Probable DNA polymerase OS=Neurospora intermedia PE=3 SV=1	[more]
DPOM_PODAS	6.2e-19	29.55	Probable DNA polymerase OS=Podospora anserina PE=3 SV=1	[more]
DPOM_ASCIM	5.8e-17	25.71	Probable DNA polymerase OS=Ascobolus immersus PE=3 SV=1	[more]

BLAST of CmaCh17G005020 vs. TrEMBL


Match Name	E-value	Identity	Description
K7MCC3_SOYBN	5.3e-102	52.97	Uncharacterized protein OS=Glycine max PE=4 SV=1	[more]
A0A0R0G3N8_SOYBN	2.0e-101	52.97	DNA polymerase OS=Glycine max GN=GLYMA_15G187700 PE=3 SV=1	[more]
E1AB36_SILLA	3.4e-101	49.22	DNA polymerase OS=Silene latifolia GN=dpo PE=4 SV=1	[more]
A0A101LW89_PICGL	2.7e-98	56.09	DNA polymerase OS=Picea glauca GN=dpo PE=3 SV=1	[more]
Q5U692_BETVU	9.7e-96	50.55	Orf774 protein OS=Beta vulgaris subsp. vulgaris GN=orf774 PE=4 SV=1	[more]

BLAST of CmaCh17G005020 vs. TAIR10


Match Name	E-value	Identity	Description

BLAST of CmaCh17G005020 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|1021467527\|ref\|XP_016182637.1\|	9.5e-121	59.34	PREDICTED: DNA polymerase-like [Arachis ipaensis]	[more]
gi\|955371647\|ref\|XP_014623435.1\|	2.9e-101	52.97	PREDICTED: DNA polymerase-like [Glycine max]	[more]
gi\|307101748\|ref\|YP_003875487.1\|	4.9e-101	49.22	DNA polymerase (mitochondrion) [Silene latifolia]	[more]
gi\|973603353\|gb\|KUM46512.1\|	3.9e-98	56.09	DNA polymerase (mitochondrion) [Picea glauca]	[more]
gi\|9838405\|ref\|NP_064018.1\|	1.4e-95	50.55	orf409 gene product (mitochondrion) [Beta vulgaris subsp. vulgaris]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR004868	DNA-dir_DNA_pol_B_mt/vir
IPR006172	DNA-dir_DNA_pol_B
IPR012337	RNaseH-like_sf
IPR017964	DNA-dir_DNA_pol_B_CS
IPR023211	DNA_pol_palm_dom_sf

Vocabulary: **Molecular Function**
Term	Definition
GO:0000166	nucleotide binding
GO:0003677	DNA binding
GO:0003887	DNA-directed DNA polymerase activity
GO:0008408	3'-5' exonuclease activity
GO:0003676	nucleic acid binding

Vocabulary: **Biological Process**
Term	Definition
GO:0006260	DNA replication

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0071897	DNA biosynthetic process
biological_process	GO:0006260	DNA replication
biological_process	GO:0090305	nucleic acid phosphodiester bond hydrolysis
cellular_component	GO:0042575	DNA polymerase complex
molecular_function	GO:0008408	3'-5' exonuclease activity
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003887	DNA-directed DNA polymerase activity
molecular_function	GO:0000166	nucleotide binding
molecular_function	GO:0003676	nucleic acid binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh17G005020.1	CmaCh17G005020.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004868	DNA-directed DNA polymerase, family B, mitochondria/virus	PFAM	PF03175	DNA_pol_B_2	coord: 140..376 score: 6.4
IPR006172	DNA-directed DNA polymerase, family B	SMART	SM00486	polmehr3	coord: 67..482 score: 0.
IPR012337	Ribonuclease H-like domain	GENE3D	G3DSA:3.30.420.10		coord: 69..263 score: 1.0
IPR012337	Ribonuclease H-like domain	unknown	SSF53098	Ribonuclease H-like	coord: 69..93 score: 1.06E-31coord: 120..268 score: 1.06
IPR017964	DNA-directed DNA polymerase, family B, conserved site	PROSITE	PS00116	DNA_POLYMERASE_B	coord: 470..478 scor
IPR023211	DNA polymerase, palm domain	GENE3D	G3DSA:3.90.1600.10		coord: 284..346 score: 1.7E-28coord: 444..507 score: 1.7
None	No IPR available	PANTHER	PTHR33568	FAMILY NOT NAMED	coord: 240..382 score: 1.3
None	No IPR available	PANTHER	PTHR33568:SF1	SUBFAMILY NOT NAMED	coord: 240..382 score: 1.3
None	No IPR available	unknown	SSF56672	DNA/RNA polymerases	coord: 278..407 score: 8.9E-53coord: 434..507 score: 8.9

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh17G005020	Silver-seed gourd	carcmaB1239
CmaCh17G005020	Cucumber (Chinese Long) v3	cmacucB0451
CmaCh17G005020	Watermelon (97103) v2	cmawmbB377
CmaCh17G005020	Wax gourd	cmawgoB0457
CmaCh17G005020	Cucumber (Gy14) v1	cgycmaB0295
CmaCh17G005020	Cucurbita moschata (Rifu)	cmacmoB353
CmaCh17G005020	Wild cucumber (PI 183967)	cmacpiB383
CmaCh17G005020	Cucumber (Chinese Long) v2	cmacuB379
CmaCh17G005020	Melon (DHL92) v3.5.1	cmameB313
CmaCh17G005020	Watermelon (Charleston Gray)	cmawcgB328
CmaCh17G005020	Watermelon (97103) v1	cmawmB351
CmaCh17G005020	Cucurbita pepo (Zucchini)	cmacpeB371
CmaCh17G005020	Bottle gourd (USVL1VR-Ls)	cmalsiB331
CmaCh17G005020	Bottle gourd (USVL1VR-Ls)	cmalsiB336
CmaCh17G005020	Cucumber (Gy14) v2	cgybcmaB763
CmaCh17G005020	Melon (DHL92) v3.6.1	cmamedB365