CmaCh17G004470 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh17G004470
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	Unknown protein
Location	Cma_Chr17 : 2661834 .. 2670861 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGTTCCAATGTACGAGATCTTGTAGCACTTACCAATGAGGCCCTATCGATTAGTATTATGTAGAAGAAATCAATTCTAGACACTAGTATAATTAGATCTGTTCTTCATAGACAAACTTAGGATTTGGGATCCCAGGTAAGATCGGTTCAGATCATGTGATCCTTTTCTATTAGATAGGAAGGGCTGCTGCACAAAATGTGCATCTAAGTAATTGCTCCATAGATCCTATATCTAAGTAATTGCTCTATAGATCCAATATCTATCTGTATGAAGAAGAAATCATATAACAAAGGGGGTTCTTTTTTGTACAAATGGTACTTCGAACTTTGAATGAGCATAACTCCCCACTCTCATTCGAGAGAGAGCAAGAGGAAGAGATATGTAATTTAAAGGGAGATTATAGTGATTTAGGAGGGTTTCGATTCGGTACCCGTCGGGCGAATTGGGTCGAGAGATCCAGAAACCATGAAGTCCAACCCGTTTCAACCCAACCCAACCGTTCACGGCCCATGGGTAGGCACTCCCCTGTACAACCTGTGGCCTACACCTCCTCTACAACTCGCCTGCATGAAGTTGGAATCGTTAGTAATCGTCGGTCGTCACCACCCAATCACCTGTGGCCTACGCCTCCTCTTGACTCGGTTCAATGGCTCATCCTGGCTCAGCTTGGTAACTTACTTTATATCGTTTTTTAGATAGTTTTAGGACATATATGGAAAATAACTATCATGTTTAAATAAACAACTGGGTATGTCATGGTATGTCATGTTTTGTCTTACCATGTAAAATTATCTGAGGGAATGATGTTAAAGGTAAATCATCGCTCGCACTTTTGATGTCAACAGATTTGCAATTGTGCGGCACTCACTTTCCAACGATAAGTGAGCTAAGTCAATTCGTTCTTGCATCGCCTACGGCCAAGCGACGTATGCTCGAGTCTCTGGCCTTGGTTTTAAGAGAAGGTTTTAGAAAACGAGGGCAGAGAGAGATTTTAAAAGGAGAGATTTTTGAAAGAGACATTATATAAGCAGGCAATAACAACGGCTCACAATATATAACCTTGGGTAGGGATAAGTTGACAACTAGTCGTATCCCCCTATTGATGGTGTTAATATAACACATGTGGAAGCAATTTAGATCTTAGGCACTCTTAGAACATTAATTATAGTAAATAACTAGCATGTTCATAAGTATTAAAACTTAATGAGTTTGAATACTAACCTTTTGTAGTTCAAATTCCTTTTTCCTCACGAATCGGTTTCGAACCACCACTAGTGTCTTCTCCACTATCCTCCGACCTTAGAATGGGATTGTGGAATCCGGTGAGTGACTTAAACTTGGGAGGGATTTTGTATATATGAAGAGAGTGTTTGTGAGAGGTTTTTCTCAAGGTTTTTTTACCAAGAAGAAGACCTTTCATGTATTATGATCACTCTATTTATAGAGTCATGTTTGCGTGTTCATGCAAATTTGAGATCACCTAATTTTGACACTCAAAATTCTACTCAAATGTTTGGGATTATGTGGCAAGCACGCATGTTTGAGTTAACCAAATTTTGACACTCAAAATTCCACTCAAATTTGTGGGGTTTATTTGGTAAACATGCAAGTTTGGTTAAACCAAATTTTGACACCTCAAAATTCCACTGACATGGATTTTTCTATTAAATGAAGTCAATATTTTGACTTTCTTCATTTTGATTCAACAATCAATTTGAATTATTAATTTTAAATTAAAGTAATATTAAATGATTAATTAAAATATTTAATTAATATTTAATATTAATTCAAATGTCAATCCCAATTAATTCAGACACATATTTGATTAAGATATTTAAATTTTATTTAAATATCACAAATTCTCTCTTTTTGTTTAATTCGTAAATAAACAAAAATGTGGTTAAATATATCGTATATATGTAGGGCATATTCCCTAATTTGAATTTGAACACTTCGAACTCACTTGTCACATTGTTCTATGGTTTAGTCTGATATGAGCTAGCAGAGGGACCTAATGGACCTATAGATCATGGGCTCCAACGATCCAAGATTACCTGGTTAAACTCATTAACCTTGTTAACCAACATTCATTAACTACTAGGACATTCCACTTTAGCCTAGTAGTTGCACTCCCCTCACTATAGATATATTTCTGTCCATTTGATATAACCATGATTAGTAAGTCAATCCTTTGCAGGTTGTTCGTAACTAGAGCTGGGTCAATTTACCGTTTTACCCCTAAAGTTACTTCTTATTTCTTACCGTTTTACCCCTAAAGTTATTTCTTATTTCTTATGTCTCACTGATCCTCTAATGAACAATTGGTTTGTGGTCCAACCAATAAACCGAATCCCTCTCAGGCCAATGAGAGGGTGGAGCCCCTTGTTCAAGACCTGGAGTTAGTACTTAAGGGAATTACCTCTCTTCTATCCGTAAAAGTGGGTAGTAGTGAATTCCATCTTGCACCCCACGTCCCCAGCCATTTACCTAGTCTTACCCCTAAAATGGGAGGCCTATTGAGTCGGCGAACTTGAGTCACTCTCACCCATGCAAATCTAAGGATAATTTCGAATAAACAGGAGTTCATGGTTAGCTCAGGATTAAGATTGAGTTACCTAAGTCATCGAATGAAAAGAAAATCAGTCTCAACAGTAAACGACATTATAAAGTGAGAGTGATTTTCTTCATGGTCGGATCTTATGCAATACTCATTGCATAGGACACCTCCACTCACATGTCTCCTCATGTACAATTTAGTGATCACATTGTAAAGTGAGAGTGATTTTCTTCAAAGTGGGCCGCATCCATAGTGTCCCCAAAATAAGGTATTCAGCCTTATCCTTATACTATAGATCATTTTGACTATATACTTGAACTTGATCAACTCTTATGTCTTTACATATAGTTCAAGTAATCATACTATAGCCAGAGTGTTCTTAGTTTATTGAATTTAGATTAATGATCGTAAAGTTCACTATATCCAATAACAATCTTTATGGAATAAACAACAATAATAACTTTATTGAAAATAAAATATGTTTTTTGTTTACCAACTATGAGTTTTAGGACATAAAACCCAACACCTATAGTACATTCTTTGGCATTTCATGTCTGACATGCCTAGACATGATATTTCTGAAACGTCATACTTCCTAGAAATACAAATGTAAAACACTAGAATATTAAAAGACATAAAGGGTTGGGCTTGTCATGGGCATGCGGCCATGGGCAACATGCCTTGGACGAGCATGACCATGACATCCTCCCCCACGTAATTGGTTGACGTCTCTGTCAACCGACTACTTTCAAACCTGGCGATGTGGGTGGCAGCGGAGTCCAGATCTTCAGCGCGTTCCCAACTTGTTTCCTCTGTAGGAAGATTCTTCCATTTGACAAGGAATTCACGAATCGTCCGTACAGGTCTTCCTATCTTTCTAACCCTGTCGGCTAGGATCTCCTCTATTTCTTTGTTGTCTCTTTGTTTCAGATCGATGCTCGGTCTCGTGATACATTTTGTTGATCGTCGTCTGGGTCAGGGTGATAGGGCTTCAAGTTGCTCATATGAATTAGTGGGTAGATTTTCATCCTTGTGGGTAGCGCAACTCTGTAGAAGGTAGCCCCAATCTTTTTAAGGACTTCAACCGGCCATTCATATTTTCAAACTAGTCTCTGGTCCTTTCGGCTGCGAAATCTGATCTGTTCTGGTCTCAACTTGATGAGGACTTGATCTCCTACTTAGAATTGGAGGGGGCGACGCTTCTTGTCCTCCCACTTCTTCATATGCTTGGAAGCTTTCTCTAAATATGCTCGGGCTATATCTGTTGTCTACTTCCATTCTCTTGTGAAGTTTTGAGCTTGAGGGTTTTTCCCTGCATAAGGATGATCAATAATAAGGGGCAAGGCTGGTTGTCGTCCACTTACAATTTCGAAGGGGCTCTTCCTCGTACACGAGCTCGTTTGACAATTGAAACAGAATTGGACGGCATCTAGCAGTTGTATCCCATTTTTCTGGCGAGCGTCAACGAAGTGACGTAAGCATTCTTTGAGTAAGCAGTTGAACAGTTCTGTCTGTCCATCGGTTTGAGGATGATAGCTCGAGGAGATGTTTAAAGTCGTTCCCAAGAAGGCAAATAATTCGGTCCACAATGTGCCAATGAATCTACCATCCCTATCACTGATGATGCTCGACAGAATGCCCCATAACTTTACAACGTGTTTGAAAAATAGTTGGGTTGTTAGTTCAGCCGAGCATAATTTGGGAGTGGGGACGAACGTCGCATATTTTGAGAACCGGTCTATGATAACCAAGATGGTGTCATATTCTCCGACTTTTGGGAGGTGTGTTATGAAATCCAGAGACACACTTTCCTAAGGCCTTGTTGGCACAGGTAGAGATTCTAAGAGTCTCGAGACTTTGGCTTTCTCGACTTTGTTCTGTTGGCAGATGAGGCACGTGTTGGTGTACTGCATGATGTCGTCTCACATATTCGGCCAAAAGTACCCCTTTTTTGTTAGGGCATATGTTCTTTGTCACCCAGGGTGTCCGGCTCATAAGGTATCATGGCATTCCTGAATAAGCTTCTTCCTCTATTCTCCCATTCTTGGGACGTATAATTTGTTTCCTTTAGTCATTAGAAGGTCTCCCTCGACCCAAAACTATCGTGTCTTCTTAGCTTTAGCTAGTTCGACGACGGCTTTGGCCGATGGGTCTTTGTGTAAATGTTCTTTGATGATGTCGTGCATCGATCCATCGATCTTACTTGAATGAATATGGACTAACATGCACAGGGCCGCATGTTCACCCTTCCGACTCAGTGCATCGGTTGCTTGATTACTCTTTCCTGCATTGTGTTCAAATTTGAAGTCGAACAGCCAACGACTTCTGCCACCGAGCTTGTTTTGTCGTCAATATTGGTTGATCGAAGAAGTGGCAAATGACACTGTTATCCGTCTTCACTATGAACTGTGATCCCAAGAGATATTATCTCCAGACTCGTAGGCAATGGACCACAGCCAGCATTTCTTTTTCAGAGACAGTGTATCTCCGTTCAGCATCATTGAGCTTTCGATTTTCATAAGTGATGGGGTGACCTTCTTGAATAAGGACACCTCCTAGGTGATACGTACTTGGTAGTACCCTGATTGTAAGTCCAACTTCGTGAAGTATTTGGCCCCGTGAAGTTGGTCAAACAAGTCGACTATTATCGGCAGTGGGTATTTGTTGCGTACCGTCACCTTGTTTAAGGCTCTATAATCTATGCACAAACGCAACGTCTCATCCTTCTTTTTCTGCAATAGTACGGGGGCTCCGTAAGGCGCCTTTGCCAAGCGGATGAATCCTACCGTCAACAACTCATCTAGTTGTTTCCTCAATTCGGCTAGCTTAGGGGGAGCCATCCAGTATGCGTTCTTCGTTGGGGGTTTAACCCCAGGGAGGAGTTCAATTTCATGATCAATGCCTCGATGGGGTGGTAATGTTTGTGGTAAGCTCTCTAGCATTATGTCAGCATAACTGTCTAGTACCTCCTTGATTTCGCTTGGAATAGTTTCCTCAATGGTCACTTCTTCCATCAGTGGTATAGCCATAAATGTAGGTTCCTCTCGTGCGAGTCCTCTTTTCAATTGTATGGCCGAGATCATTCTAAGATTACCTAGTTGCTTGATGCTTGCAGGTATTACTGTGGGGTTGTGGTTGGTGATCACCAAGCATTTCGCCAGTGGCATTGGGATAACTTTGTGCTCTAGGAGGAACTCCATCCCAAGTACGACGTCAAAGTCGTCCATGCAAACCATGACAAGGTCCAACTCTTCTGTCCAAGTCCCTAATTTGAAGGGGACTCTTTTGGAAACTTCCACAATAGGCAAGGCCTCAGAGTTGACAGCTTTCATTTTTTCGGGGTCCTTTTCTATGGTGAGTCCCAATCTTCGTGCTTCTTGATCGGCGATGAAGTTGTGGGCCGCTCCTGAGTCTATCAAGGTGCTCTTGCTTGGTCGAGAGTTTATTATCGCATCCACGAACATGAGCCCTTTCTCTATTATCTCCTTTGGTTTGACCTTCCGTTGGAGGGCTGACAAGAATTTAAGTGCGCCCATTCGAGGGTTGTCTTGATCTTCCTTCTTGTCTTGCATTGTCCCTACTCCTGTGTCGTAGCTATCTTGAATGGACACTTGGAGTGCACTGAGAGAGTCCCGATGAGGATAGTAGGACAGTTTGTGGGGGGCCTTTACACAACAGGCATTGTAAAGATGTTGTCGGGTGGTTCTTTTGAGGGTAAGGTCCTCGAGATGTTCCCGCTTGGTTGTTCTGAGGAGGTCTATCTGTCCACCCGCTTGATCTGTCGTTACTTCCGTTTGGCCTATTGGGACTTCCATTTCGATGACCTGACGGTTTATATGTTTTTCCCCCAGTGTTTGGGCCTGTGTTGTTCTTCTTTGGTAACCCACTTCGTTCTCATAGTCTAGAAGTCTCTCAGCGCTGGCAATTGCGGTAGCTAGGTCTTTGACCTTTTTCTCGTGTATTTTCGTATAAAGAAGAATACCTTGTCCTTCTTTAATGTGCCCTTGATATCTAGCATCAAGGTTGAGAACTGTCTGACATAGTCCCTTATGCTTCCAGTTTGCTTTAGGGCTATTAGTTTTTCCATTGCCAGATGTTCTACGTTTTCGGGGAAGAATTGGTCCCTCAACTCTCTCTTGAGGTCTTCCCACGAGTTTATGGTGCACAATCCATTCTCGATGTCTTGCACCTTCGTACGCCACCAAAGTTTAGCATTGTCTATGAGATACATCAAGGCTATTGTCACCTTTATGTCGTCAGTACAAGCCGTTGTGGCTTTGAAGTACTGTTCGACATCAAAGATGAAGTTCTCCAACTCTTTGGCGTCCCGGTTCCATTTGAAAGGTCTAGGGTCTGGGAACTTCAGTTTGTTGGATTCTGTATTGGTTTGCCCAGCCGTGACGTTCTCCACGGCTTTCATGGTCACCTTAATTCGGGTGCTCATGATGGACATCTTTTCTTGGATGTCATCGATCGTTGTTCTGAACTCGTTAGCTAATCCGTTGAACAAACTCATCATTGTATTTTGTAGCACGTCAAACTCTTCGCCACGTCCCTCCTTGTACGCGACAGAGCTATCGGGGCTACTAAATAGTCTTGGGCTGCTCGTAAGAACAACTCTTTCTTAGAGCGAGGTCACTCGAAACATCAGTTCTGCGATTGGCAACCCATCCAGGCGGTTGCCCATTGCATCGATTTCTACGACTTTTCCATTCAATTCTGTCACCCGTGCTTTTAGGAAGCGAATGGTGTCAGGGACTTCTTTGGAACAGCATTTCCTCATTTATTAGAGTAAGCCGGTCAGCTTGTGATTTGGGTGTCGACTTTGTCGTCAACATGTTTTCGATCTTTGCTATGTCACGAAGCTATGTTTTTGGTCTTTGCTTTGTCGTCGACTTTGTCCCCGACCACTCTGATACCATTTGTCACAATCGCACTTTTGATGGCAACGGACTTGCAATTGTGCGACACTCACTTCCCAACGACAAAAGTGTCTTGCGTCGCCTACGGCCAAGCAACTTATGCTCAAGCCTCTGGCCTCAGTTTTAAGAGAATGTTTTAGAAAACGAGGGCAGAGAGATTTTCGAAATAGAGATATTTGGTATCCCCACTATAGCTTATAGTACATTCTGTGTCATTTCATGTCTGACAAGACTTAGATATGATATTTCTGAAACGTCATACTTCCTAGAAATACAAAAGTAAAAACACTAGAATATGATTAGACATAAAGAGTTGAGCTTGTCATGGGCAACATACCTTGGACGTGTATGACCTTGCACTAAGCACGTGCATTTTCTTGCACACATTAATTATACCTTCGAGGTTTACGAGTAATAATAGTTGGATACAAACTCAAAAGAAATCAAATCAAAGTTAACAAACAATTAGCCGAGAAAGAGGATCATAGCAATAATTGGTGAATAAGGAACTTAGAGGTAATATTGATGACACAATTGTGTGATTTTACAAATATTATTAAAATAAACAAATGATTAAAGACAGAAGTTGATTACGAGGACACAGTATTTTGAATTGAATTTGATGAAAAGTCATGAAACAAATGACTCCAAATAAAATTGGTGATTATTGGAGATGAGACTCCTTAGTAGCCAGGAAACTGTGGTGGAGGCGGCGATGAATACTGGAAGCCGATATTTGGTGGGAGAATTAAGTCCTCGAATGCTGGCGGTGGAGAAGAATCGGGAGCAGGAGGAGGAGTTTCGATCGCAGGAGGTGGAGATTGTTCTGGTGGAGGCGGAGATTGTTCTGGTGGAGGCGGAGATTGTTCTGGTGGAGGCGGAGATTGCTCTGGTGGAGGCGGAGATTGCTCTGGTGGCGGCGGAGATTGCTCTGGTGGCGGCGGAGATTGCTCTGGTGGCGGCGGAGATTGCTCTGGTGGAGGCGGAGATTGTTCTGGTGGCGGCGGAGAGTGAACGGGTGGGGGCGGAGATTGTTCTGGTGGGGGAGGAGAGTAAACGGGTGGGGGTGGAGATTGTTCTGGTGGCGGTGGAGAGTAAACGGGTGGGGGTGGAGATTGTTCTGGTGGCGGTGGAGAGTAAACGGGTGGGGGTGGAGATTGTTCTGGTGGCGGTGGAGAGTAAATGGGTGGGGGTGGAGATTGTTCTGGTGGGGGTGGAGAGTAAACAGGTGGGGGTGGAGATTGTTCTGGTGGGGGTGGAGAGTAAACAGGTGGGGGTGGAGATTGTTCTGGTGGCGGCGGAGAGTAGACGGGGGGTGGCGGAGAGTAGACGGGAGGTGGTGGGGAGTGGACCGGTGGTGGAGGAGAGTGGTCGGGTGGTGGTGGAGAGTGGTCGGGGGGTGGTGGAGAGTGGACTGGTGGCGGTGAGGATGGAACAGAGGGCGTTGGTTTGTGAGATGTTGGTGGTGGAAACACAATCGGAGATGGTGGAGACCCAACTTCTATGTAAGGGATTTCACCCACAGATGGTGGCGGCGGCGGCCTAA

mRNA sequence

ATGGGTTCCAATGAGGGTTTCGATTCGGTACCCGTCGGGCGAATTGGGTCGAGAGATCCAGAAACCATGAAGTCCAACCCGTTTCAACCCAACCCAACCGTTCACGGCCCATGGGTAGGCACTCCCCTGTACAACCTGTGGCCTACACCTCCTCTACAACTCGCCTGCATGAAGTTGGAATCGTTAGTAATCGTCGGTCGTCACCACCCAATCACCTGTGGCCTACGCCTCCTCTTGACTCGGTTCAATGGCTCATCCTGGCTCAGCTTGATGAGACTCCTTAGTAGCCAGGAAACTGTGGTGGAGGCGGCGATGAATACTGGAAGCCGATATTTGGTGGGAGAATTAAGTCCTCGAATGCTGGCGGTGGAGAAGAATCGGGAGCAGGAGGAGGAGTTTCGATCGCAGGAGGTGGAGATTGTTCTGGTGGAGGCGGAGATTGTTCTGGTGGAGGCGGAGATTGTTCTGGTGGAGGCGGAGATTGCTCTGGTGGAGGCGGAGATTGCTCTGGTGGCGGCGGAGATTGCTCTGGTGGCGGCGGAGATTGCTCTGGTGGCGGCGGAGATTGCTCTGGTGGAGGCGGAGATTGTTCTGGTGGCGGCGGAGAGTGAACGGGTGGGGGCGGAGATTGTTCTGGTGGGGGAGGAGAGTAAACGGGTGGGGGTGGAGATTGTTCTGGTGGCGGTGGAGAGTAAACGGGTGGGGGTGGAGATTGTTCTGGTGGCGGTGGAGAGTAAACGGGTGGGGGTGGAGATTGTTCTGGTGGCGGTGGAGAGTAAATGGGTGGGGGTGGAGATTGTTCTGGTGGGGGTGGAGAGTAAACAGGTGGGGGTGGAGATTGTTCTGGTGGGGGTGGAGAGTAAACAGGTGGGGGTGGAGATTGTTCTGGTGGCGGCGGAGAGTAGACGGGGGGTGGCGGAGAGTAGACGGGAGGTGGTGGGGAGTGGACCGGTGGTGGAGGAGAGTGGTCGGGTGGTGGTGGAGAGTGGTCGGGGGGTGGTGGAGAGTGGACTGGTGGCGGTGAGGATGGAACAGAGGGCGTTGGTTTGTGAGATGTTGGTGGTGGAAACACAATCGGAGATGGTGGAGACCCAACTTCTATGTAAGGGATTTCACCCACAGATGGTGGCGGCGGCGGCCTAA

Coding sequence (CDS)

ATGGGTTCCAATGAGGGTTTCGATTCGGTACCCGTCGGGCGAATTGGGTCGAGAGATCCAGAAACCATGAAGTCCAACCCGTTTCAACCCAACCCAACCGTTCACGGCCCATGGGTAGGCACTCCCCTGTACAACCTGTGGCCTACACCTCCTCTACAACTCGCCTGCATGAAGTTGGAATCGTTAGTAATCGTCGGTCGTCACCACCCAATCACCTGTGGCCTACGCCTCCTCTTGACTCGGTTCAATGGCTCATCCTGGCTCAGCTTGATGAGACTCCTTAGTAGCCAGGAAACTGTGGTGGAGGCGGCGATGAATACTGGAAGCCGATATTTGGTGGGAGAATTAAGTCCTCGAATGCTGGCGGTGGAGAAGAATCGGGAGCAGGAGGAGGAGTTTCGATCGCAGGAGGTGGAGATTGTTCTGGTGGAGGCGGAGATTGTTCTGGTGGAGGCGGAGATTGTTCTGGTGGAGGCGGAGATTGCTCTGGTGGAGGCGGAGATTGCTCTGGTGGCGGCGGAGATTGCTCTGGTGGCGGCGGAGATTGCTCTGGTGGCGGCGGAGATTGCTCTGGTGGAGGCGGAGATTGTTCTGGTGGCGGCGGAGAGTGAACGGGTGGGGGCGGAGATTGTTCTGGTGGGGGAGGAGAGTAAACGGGTGGGGGTGGAGATTGTTCTGGTGGCGGTGGAGAGTAAACGGGTGGGGGTGGAGATTGTTCTGGTGGCGGTGGAGAGTAAACGGGTGGGGGTGGAGATTGTTCTGGTGGCGGTGGAGAGTAAATGGGTGGGGGTGGAGATTGTTCTGGTGGGGGTGGAGAGTAAACAGGTGGGGGTGGAGATTGTTCTGGTGGGGGTGGAGAGTAAACAGGTGGGGGTGGAGATTGTTCTGGTGGCGGCGGAGAGTAGACGGGGGGTGGCGGAGAGTAGACGGGAGGTGGTGGGGAGTGGACCGGTGGTGGAGGAGAGTGGTCGGGTGGTGGTGGAGAGTGGTCGGGGGGTGGTGGAGAGTGGACTGGTGGCGGTGAGGATGGAACAGAGGGCGTTGGTTTGTGAGATGTTGGTGGTGGAAACACAATCGGAGATGGTGGAGACCCAACTTCTATGTAAGGGATTTCACCCACAGATGGTGGCGGCGGCGGCCTAA

Protein sequence

MGSNEGFDSVPVGRIGSRDPETMKSNPFQPNPTVHGPWVGTPLYNLWPTPPLQLACMKLESLVIVGRHHPITCGLRLLLTRFNGSSWLSLMRLLSSQETVVEAAMNTGSRYLVGELSPRMLAVEKNREQEEEFRSQEVEIVLVEAEIVLVEAEIVLVEAEIALVEAEIALVAAEIALVAAEIALVAAEIALVEAEIVLVAAESERVGAEIVLVGEESKRVGVEIVLVAVESKRVGVEIVLVAVESKRVGVEIVLVAVESKWVGVEIVLVGVESKQVGVEIVLVGVESKQVGVEIVLVAAESRRGVAESRREVVGSGPVVEESGRVVVESGRGVVESGLVAVRMEQRALVCEMLVVETQSEMVETQLLCKGFHPQMVAAAA

Homology

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BLAST of CmaCh17G004470 vs. TrEMBL
Match: A8Y2T2_CAEBR (Protein CBG22662 OS=Caenorhabditis briggsae GN=CBG22662 PE=4 SV=2)

HSP 1 Score: 80.9 bits (198), Expect = 3.8e-12
Identity = 91/172 (52.91%), Postives = 103/172 (59.88%), Query Frame = 1


Query: 130 EEEFRSQEVEIVLVEAEIVLVEAEIVLVEAEIALVEAEIALVAAEIALVAAEIALVAAEI 189
           E E    E E+V VE+E+V VE+E+V VE+E  LVE E  LV  E  LV  E  LV  E 
Sbjct: 678 ESELVEVESELVEVESELVEVESELVEVESE--LVEVESELVEVESELVEVESELVEVES 737

Query: 190 ALVEAEIVLVAAESERVGAEIVLVGEESKRVGVEIVLVAVESKRVGVEIVLVAVESKRVG 249
            LVE E  LV  ESE V  E  LV  ES+ V VE  LV VES+ V VE  LV VES+ V 
Sbjct: 738 ELVEVESELVEVESELVEVESELVEVESELVEVESELVEVESELVEVESELVEVESELVE 797

Query: 250 VEIVLVAVESKWVGVEIVLVGVESKQVGVEIVLVGVESKQVGVEIVLVAAES 302
           VE  LV VES+ V VE  LV VES+ V VE  LV VES+ V VE  LV  ES
Sbjct: 798 VESELVEVESELVEVESELVEVESELVEVESELVEVESELVEVESELVEVES 847

[Close]

BLAST of CmaCh17G004470 vs. TrEMBL
Match: A0A0L7R973_9HYME (Flagellar attachment zone protein 1 OS=Habropoda laboriosa GN=WH47_11596 PE=4 SV=1)

HSP 1 Score: 70.9 bits (172), Expect = 3.9e-09
Identity = 104/277 (37.55%), Postives = 140/277 (50.54%), Query Frame = 1


Query: 123 VEKNREQEE-----EFRSQEVEIVLVEAEIVLVEAEIVLVEAEIALVEAE-IALVAAEIA 182
           VEK+R ++E     E  + EVE V VE E V VE E V VE E   VE E +A+   E+A
Sbjct: 538 VEKSRSKDEVAVEVEEVANEVEEVAVEVEEVAVEVEEVAVEVEEVAVEVEEVAVEVEEVA 597

Query: 183 LVAAEIALVAAEIAL--------VEAEIVL-VAAESERVGAEIVLVGEESKRVGVEIVLV 242
           +   E+A+   E+A+        VE E+ L VA E E V  E+  V  E + V VE+  V
Sbjct: 598 VEVEEVAVEVEEVAVEVEEVAVEVEVEVRLEVAVEVEEVANEVEEVAVEVEEVAVEVEEV 657

Query: 243 AVESKRVGVEIVLVAVESKRVGVEIVLVAVESKWVGVEIVLVGVESKQVGVEIVL----- 302
           AVE + V VE+  VAVE + V VE+  VAVE + V VE+  V VE ++V VE+ +     
Sbjct: 658 AVEVEEVAVEVEEVAVEVEEVAVEVEEVAVEVEEVAVEVEEVAVEVEEVAVEVEVEVRLE 717

Query: 303 -----VGVESKQVGVEIVLVAAESRRGVAESR---------REVVGSGPVVEESGRVVVE 362
                V VE ++V VE+  VA E R     SR         R     G  +EE   V VE
Sbjct: 718 VAVEEVAVEVEEVAVEVEEVAVEGRSRGRRSRDRRSRGRRSRGRRSRGRRIEE---VAVE 777

Query: 363 SGRGVVESGLVAVRMEQRALVCEMLVVETQSEMVETQ 366
                VE   VAV +E+ A+  E + VE +   VE +
Sbjct: 778 VEEVAVEVEEVAVEVEEVAVEVEEVAVEVEEVAVEVE 811

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BLAST of CmaCh17G004470 vs. NCBI nr
Match: gi|268535350|ref|XP_002632808.1| (Hypothetical protein CBG22662 [Caenorhabditis briggsae])

HSP 1 Score: 91.7 bits (226), Expect = 3.1e-15
Identity = 119/283 (42.05%), Postives = 156/283 (55.12%), Query Frame = 1


Query: 90  LMRLLSSQETVVEAAMNTGSRYLVGELSPRMLAVEKN-REQEEEFRSQEVEIVLVEAEIV 149
           LM + S    V    M   S  +  E+   ++ VE    E E E    E E++ VE+E++
Sbjct: 306 LMEVESELMEVESELMEVESELM--EVESELMEVESELMEVESELMEVESELMEVESELM 365

Query: 150 LVEAEIVLVEAEIALVEAEIALVAAEIALVAAEIALVAAEIALVEAEIV-----LVAAES 209
            VE+E++ VE+E+  VE+E+  V +E+  V +E+  V +E+  VE+E+V     LV  ES
Sbjct: 366 EVESELMEVESELMEVESELMEVESELMEVESELMEVESELVEVESELVEVESELVEVES 425

Query: 210 ERVGAEIVLVGEESKRVGVEIVLVAVESKRVGVEIVLVAVESKRVGVEIVLVAVESKWVG 269
           E V  E  LV  ES+ V VE  LV VES+ V VE  LV VES+ V VE  LV VES+ V 
Sbjct: 426 ELVEVESELVEVESELVEVESELVQVESELVEVESELVQVESELVKVESELVEVESELVE 485

Query: 270 VEIVLVGVESKQVGVEIVLVGVESKQVGVEIVLVAAESRRGVAESRREVVGSGPVVEESG 329
           VE  LV VES+ V VE  LV VES+ V VE  LV  ES     ES    V S  +  ES 
Sbjct: 486 VESELVEVESELVEVESELVEVESELVEVESELVEVESELMEVESELMEVESELMEVESE 545

Query: 330 RVVVESGRGVVESGLVAVRMEQRALV-CEMLVVETQSEMVETQ 366
            + VES    VES LV V  E   LV  E  +VE +SE+VE +
Sbjct: 546 LMEVESELVEVESELVEVESELVELVEVESELVEVESELVEVE 586

[Close]

BLAST of CmaCh17G004470 vs. NCBI nr
Match: gi|999985857|gb|KXJ24998.1| (hypothetical protein AC249_AIPGENE13869 [Exaiptasia pallida])

HSP 1 Score: 83.2 bits (204), Expect = 1.1e-12
Identity = 72/245 (29.39%), Postives = 148/245 (60.41%), Query Frame = 1


Query: 139 EIVLVEAEIVLVEAEIVLVEAEIALVEAEIALVAAEIALVAAEIALVAAEIALVEAEIVL 198
           ++V+V A++V+V A++V+V  ++ +V A++ ++  ++ +V A++ +V A++ +V A++V+
Sbjct: 187 DVVVVGADVVVVGADVVVVGEDVVVVGADVVVLGEDVVVVGADVIVVGADVVVVGADVVV 246

Query: 199 VAAESERVGAEIVLVGEESKRVGVEIVLVAVESKRVGVEIVLVAVESKRVGVEIVLVAVE 258
           V  ++  VGA++V+VG +   VG ++V+V  +   VG ++V+V  +   VG ++V+V  +
Sbjct: 247 VGTDAVVVGADVVVVGADVVVVGADVVVVGADVVVVGEDVVVVGADVVVVGEDVVVVGAD 306

Query: 259 SKWVGVEIVLVGVESKQVGVEIVLVGVESKQVGVEIVLVAAE-----SRRGVAESRREVV 318
              VG ++V+VG +   VG ++V+VG +   VG ++V+V A+     +   V E+   VV
Sbjct: 307 VVVVGADVVVVGADVVVVGADVVVVGADVVVVGADVVVVGADVVVVGADVVVVEADVVVV 366

Query: 319 GSGPVVEESGRVVVESGRGVVESGLVAVRMEQRALVCEMLVVETQSEMVETQLLCKGFHP 378
           G+  VV E+  VVV +   VV + +  V  +   +  +++VV    E+V   ++  G   
Sbjct: 367 GADVVVVEADVVVVGADVVVVGADVAVVGADAVVVGADVVVVGADVEVVSADVVVVGADV 426

[Close]

BLAST of CmaCh17G004470 vs. NCBI nr
Match: gi|309355234|emb|CAP39207.2| (Protein CBG22662 [Caenorhabditis briggsae])

HSP 1 Score: 80.9 bits (198), Expect = 5.4e-12
Identity = 91/172 (52.91%), Postives = 103/172 (59.88%), Query Frame = 1


Query: 130 EEEFRSQEVEIVLVEAEIVLVEAEIVLVEAEIALVEAEIALVAAEIALVAAEIALVAAEI 189
           E E    E E+V VE+E+V VE+E+V VE+E  LVE E  LV  E  LV  E  LV  E 
Sbjct: 678 ESELVEVESELVEVESELVEVESELVEVESE--LVEVESELVEVESELVEVESELVEVES 737

Query: 190 ALVEAEIVLVAAESERVGAEIVLVGEESKRVGVEIVLVAVESKRVGVEIVLVAVESKRVG 249
            LVE E  LV  ESE V  E  LV  ES+ V VE  LV VES+ V VE  LV VES+ V 
Sbjct: 738 ELVEVESELVEVESELVEVESELVEVESELVEVESELVEVESELVEVESELVEVESELVE 797

Query: 250 VEIVLVAVESKWVGVEIVLVGVESKQVGVEIVLVGVESKQVGVEIVLVAAES 302
           VE  LV VES+ V VE  LV VES+ V VE  LV VES+ V VE  LV  ES
Sbjct: 798 VESELVEVESELVEVESELVEVESELVEVESELVEVESELVEVESELVEVES 847

[Close]

BLAST of CmaCh17G004470 vs. NCBI nr
Match: gi|915665411|gb|KOC67417.1| (Flagellar attachment zone protein 1 [Habropoda laboriosa])

HSP 1 Score: 70.9 bits (172), Expect = 5.6e-09
Identity = 104/277 (37.55%), Postives = 140/277 (50.54%), Query Frame = 1


Query: 123 VEKNREQEE-----EFRSQEVEIVLVEAEIVLVEAEIVLVEAEIALVEAE-IALVAAEIA 182
           VEK+R ++E     E  + EVE V VE E V VE E V VE E   VE E +A+   E+A
Sbjct: 538 VEKSRSKDEVAVEVEEVANEVEEVAVEVEEVAVEVEEVAVEVEEVAVEVEEVAVEVEEVA 597

Query: 183 LVAAEIALVAAEIAL--------VEAEIVL-VAAESERVGAEIVLVGEESKRVGVEIVLV 242
           +   E+A+   E+A+        VE E+ L VA E E V  E+  V  E + V VE+  V
Sbjct: 598 VEVEEVAVEVEEVAVEVEEVAVEVEVEVRLEVAVEVEEVANEVEEVAVEVEEVAVEVEEV 657

Query: 243 AVESKRVGVEIVLVAVESKRVGVEIVLVAVESKWVGVEIVLVGVESKQVGVEIVL----- 302
           AVE + V VE+  VAVE + V VE+  VAVE + V VE+  V VE ++V VE+ +     
Sbjct: 658 AVEVEEVAVEVEEVAVEVEEVAVEVEEVAVEVEEVAVEVEEVAVEVEEVAVEVEVEVRLE 717

Query: 303 -----VGVESKQVGVEIVLVAAESRRGVAESR---------REVVGSGPVVEESGRVVVE 362
                V VE ++V VE+  VA E R     SR         R     G  +EE   V VE
Sbjct: 718 VAVEEVAVEVEEVAVEVEEVAVEGRSRGRRSRDRRSRGRRSRGRRSRGRRIEE---VAVE 777

Query: 363 SGRGVVESGLVAVRMEQRALVCEMLVVETQSEMVETQ 366
                VE   VAV +E+ A+  E + VE +   VE +
Sbjct: 778 VEEVAVEVEEVAVEVEEVAVEVEEVAVEVEEVAVEVE 811

[Close]

BLAST of CmaCh17G004470 vs. NCBI nr
Match: gi|585706442|ref|XP_006823814.1| (PREDICTED: caldesmon-like [Saccoglossus kowalevskii])

HSP 1 Score: 68.9 bits (167), Expect = 2.1e-08
Identity = 52/171 (30.41%), Postives = 77/171 (45.03%), Query Frame = 1


Query: 202 ESERVGAEIVLVGEESKRVGVEIVLVAVESKRVGVEIVLVAVESKRVGVEIVLVAVESKW 261
           +S R   E      ES R  +E    A+ES R  +E    A+ES R  +E    A+ES  
Sbjct: 10  DSNRATIESNRTAIESNRAAIESNRTAIESNRAAIESNRAAIESNRAAIESNRAAIESNR 69

Query: 262 VGVEIVLVGVESKQVGVEIVLVGVESKQVGVEIVLVAAESRRGVAESRREVVGSGPVVEE 321
             +E     +ES +V +E     +ES +V +E    A ES R   ES R  + S  V  E
Sbjct: 70  ATIESNRTAIESNRVAIESNRAAIESNRVAIESNRAAIESNRAAIESNRTAIESNRVAIE 129

Query: 322 SGRVVVESGRGVVESGLVAVRMEQRALVCEMLVVETQSEMVETQLLCKGFH 373
           S R  +ES R  +ES   A+   + A+      +E+    +E+   C+  H
Sbjct: 130 SNRAAIESNRAAIESNRAAIESNRVAIESNRAAIESNRAAIESNRTCENIH 180

The following BLAST results are available for this feature:

BLAST of CmaCh17G004470 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CmaCh17G004470 vs. TrEMBL


Match Name	E-value	Identity	Description
A8Y2T2_CAEBR	3.8e-12	52.91	Protein CBG22662 OS=Caenorhabditis briggsae GN=CBG22662 PE=4 SV=2	[more]
A0A0L7R973_9HYME	3.9e-09	37.55	Flagellar attachment zone protein 1 OS=Habropoda laboriosa GN=WH47_11596 PE=4 SV...	[more]

BLAST of CmaCh17G004470 vs. TAIR10


Match Name	E-value	Identity	Description

BLAST of CmaCh17G004470 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|268535350\|ref\|XP_002632808.1\|	3.1e-15	42.05	Hypothetical protein CBG22662 [Caenorhabditis briggsae]	[more]
gi\|999985857\|gb\|KXJ24998.1\|	1.1e-12	29.39	hypothetical protein AC249_AIPGENE13869 [Exaiptasia pallida]	[more]
gi\|309355234\|emb\|CAP39207.2\|	5.4e-12	52.91	Protein CBG22662 [Caenorhabditis briggsae]	[more]
gi\|915665411\|gb\|KOC67417.1\|	5.6e-09	37.55	Flagellar attachment zone protein 1 [Habropoda laboriosa]	[more]
gi\|585706442\|ref\|XP_006823814.1\|	2.1e-08	30.41	PREDICTED: caldesmon-like [Saccoglossus kowalevskii]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh17G004470.1	CmaCh17G004470.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	unknown	Coil	Coil	coord: 126..146 scor

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh17G004470	Cucumber (Chinese Long) v2	cmacuB366
CmaCh17G004470	Cucumber (Chinese Long) v2	cmacuB368
CmaCh17G004470	Melon (DHL92) v3.5.1	cmameB312
CmaCh17G004470	Melon (DHL92) v3.5.1	cmameB313
CmaCh17G004470	Watermelon (Charleston Gray)	cmawcgB316
CmaCh17G004470	Watermelon (Charleston Gray)	cmawcgB328
CmaCh17G004470	Watermelon (97103) v1	cmawmB347
CmaCh17G004470	Watermelon (97103) v1	cmawmB351
CmaCh17G004470	Watermelon (97103) v1	cmawmB354
CmaCh17G004470	Cucurbita pepo (Zucchini)	cmacpeB371
CmaCh17G004470	Cucurbita pepo (Zucchini)	cmacpeB378
CmaCh17G004470	Bottle gourd (USVL1VR-Ls)	cmalsiB331
CmaCh17G004470	Bottle gourd (USVL1VR-Ls)	cmalsiB340
CmaCh17G004470	Cucumber (Gy14) v2	cgybcmaB622
CmaCh17G004470	Cucumber (Gy14) v2	cgybcmaB752
CmaCh17G004470	Melon (DHL92) v3.6.1	cmamedB364
CmaCh17G004470	Melon (DHL92) v3.6.1	cmamedB365
CmaCh17G004470	Silver-seed gourd	carcmaB0091
CmaCh17G004470	Silver-seed gourd	carcmaB0841
CmaCh17G004470	Cucumber (Chinese Long) v3	cmacucB0438
CmaCh17G004470	Cucumber (Chinese Long) v3	cmacucB0440
CmaCh17G004470	Watermelon (97103) v2	cmawmbB358
CmaCh17G004470	Watermelon (97103) v2	cmawmbB377
CmaCh17G004470	Wax gourd	cmawgoB0460
CmaCh17G004470	Wax gourd	cmawgoB0462
CmaCh17G004470	Cucurbita maxima (Rimu)	cmacmaB385
CmaCh17G004470	Cucumber (Gy14) v1	cgycmaB0371
CmaCh17G004470	Cucumber (Gy14) v1	cgycmaB0833
CmaCh17G004470	Cucurbita moschata (Rifu)	cmacmoB353
CmaCh17G004470	Cucurbita moschata (Rifu)	cmacmoB377
CmaCh17G004470	Wild cucumber (PI 183967)	cmacpiB370
CmaCh17G004470	Wild cucumber (PI 183967)	cmacpiB372