CmaCh17G004150 (gene) Cucurbita maxima (Rimu)
The following sequences are available for this feature:
Legend: exonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCCTCACCCCCTTCCAATCGCTTCATTGCATCGCTCCAAATCTTGCCTGAATTCTTCACCTACTTTAACTCCGATGAGCCTCACCATTCAACAATTCCCCTCGAGCTGTTCTACATTATTATGCTCCGTATGGAAATCCGTGGCTTTACTTCAATGTACTTCACTCTTTTTCAACCATTAACCAAAGTCTTGCTCACATTTCAACGCTCAAGTTCGTACATATTTTCTTCTCTTCAACAAGAATCAAGAATCTTGTGTTTCTTTTGGTTTCAAGAACATATTATTTTTGGTGTTAGGTCATGAGCCCAAAGTGATGTTGTGTGAATTGGATTCGTTACCTTTGGAATTGGAGGAAATGGAGCACATTGATTATGGAACTTTTGTGTCAATTGATTCACAAGACTTTAGACGTATTGTTCTTGAGTTAGATGTTCATTCCGGTGATATACTCTTCCTTGAAATCTTTTACATTAACTTCTTGAAAGAACATGTTTCCTTAAACTTTGTTGTCGTTTCTAATAGTTCATGTTTCCTTAACGAATTCACAAGTCAAGTTCAGTGCTTCAAGAAAGGAGATTGTTCTTACCAAAGAGGTATGATGTCTTTGTTGTTAGTTGCCATGAGTATATACGGTAATCTCTTTTGGTTCATATTTTCATGTATTTGGTTCATGGATAAGAATTAGTATTTCTATGCCGGTATAAATGTATGTCTAGCATTGTTTTGATGTGTGAAGTCATTGTCATTTTGTATTTTCTTCGAAGCAATTGAAAATAATTTTAGAAAAGAGATTTTGTAGCGTGAGAGTGTGAGAGACTTGGCTTCCACTCGTGGATGTAGGGGAATTTCTTCACTCTGAACCAAATCTTTGTGTCTCTTTGTTTAATTTTTGTTTGTGGGTATGAGTGCGATCGATATTGCTTCTGCTTCCACTTCCGCAACAACAATTGAGTATCATAACATTTTGGTTATGACATTAGGATACAACAAGTGATATAAGAGTGGTGTTAGGGCATAATGGTCTTTTGATGTTTACTGAGGTTTATTGATTGAATTTGGTTGATGTTGTGTAGGAAAGACGGTGCATAATTGGAGGTCTTGCAGAAGGAAAGGAATTTGAATTTTCGATCACTCTCCATCCGTTGGTGTTCTTTCATGAATTGAGCTATAAAGCAAAACGGGCATGGTTGTTCATGTCAATTAATTTCTCCACTATCATTGTTTTTCCCCTTGGAACTTCTACTCAGTGTTGGGTTTATTTCTCTCAATGA ATGGCCTCACCCCCTTCCAATCGCTTCATTGCATCGCTCCAAATCTTGCCTGAATTCTTCACCTACTTTAACTCCGATGAGCCTCACCATTCAACAATTCCCCTCGAGCTGTTCTACATTATTATGCTCCGTATGGAAATCCGTGGCTTTACTTCAATGTACTTCACTCTTTTTCAACCATTAACCAAAGTCTTGCTCACATTTCAACGCTCAAGTCATGAGCCCAAAGTGATGTTGTGTGAATTGGATTCGTTACCTTTGGAATTGGAGGAAATGGAGCACATTGATTATGGAACTTTTGTGTCAATTGATTCACAAGACTTTAGACGTATTGTTCTTGAGTTAGATGTTCATTCCGTTCATGTTTCCTTAACGAATTCACAAGTCAAGTTCAGTGCTTCAAGAAAGGAGATTGAAAGACGGTGCATAATTGGAGGTCTTGCAGAAGGAAAGGAATTTGAATTTTCGATCACTCTCCATCCGTTGGTGTTCTTTCATGAATTGAGCTATAAAGCAAAACGGGCATGGTTGTTCATGTCAATTAATTTCTCCACTATCATTGTTTTTCCCCTTGGAACTTCTACTCAGTGTTGGGTTTATTTCTCTCAATGA ATGGCCTCACCCCCTTCCAATCGCTTCATTGCATCGCTCCAAATCTTGCCTGAATTCTTCACCTACTTTAACTCCGATGAGCCTCACCATTCAACAATTCCCCTCGAGCTGTTCTACATTATTATGCTCCGTATGGAAATCCGTGGCTTTACTTCAATGTACTTCACTCTTTTTCAACCATTAACCAAAGTCTTGCTCACATTTCAACGCTCAAGTCATGAGCCCAAAGTGATGTTGTGTGAATTGGATTCGTTACCTTTGGAATTGGAGGAAATGGAGCACATTGATTATGGAACTTTTGTGTCAATTGATTCACAAGACTTTAGACGTATTGTTCTTGAGTTAGATGTTCATTCCGTTCATGTTTCCTTAACGAATTCACAAGTCAAGTTCAGTGCTTCAAGAAAGGAGATTGAAAGACGGTGCATAATTGGAGGTCTTGCAGAAGGAAAGGAATTTGAATTTTCGATCACTCTCCATCCGTTGGTGTTCTTTCATGAATTGAGCTATAAAGCAAAACGGGCATGGTTGTTCATGTCAATTAATTTCTCCACTATCATTGTTTTTCCCCTTGGAACTTCTACTCAGTGTTGGGTTTATTTCTCTCAATGA MASPPSNRFIASLQILPEFFTYFNSDEPHHSTIPLELFYIIMLRMEIRGFTSMYFTLFQPLTKVLLTFQRSSHEPKVMLCELDSLPLELEEMEHIDYGTFVSIDSQDFRRIVLELDVHSVHVSLTNSQVKFSASRKEIERRCIIGGLAEGKEFEFSITLHPLVFFHELSYKAKRAWLFMSINFSTIIVFPLGTSTQCWVYFSQ
BLAST of CmaCh17G004150 vs. TrEMBL
Match: A0A0A0K9W8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G002330 PE=4 SV=1) HSP 1 Score: 164.1 bits (414), Expect = 1.8e-37 Identity = 94/202 (46.53%), Postives = 127/202 (62.87%), Query Frame = 1
BLAST of CmaCh17G004150 vs. TrEMBL
Match: A0A0A0KNE7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G469020 PE=4 SV=1) HSP 1 Score: 144.8 bits (364), Expect = 1.1e-31 Identity = 72/130 (55.38%), Postives = 97/130 (74.62%), Query Frame = 1
BLAST of CmaCh17G004150 vs. TrEMBL
Match: A0A0A0K7E0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G002300 PE=4 SV=1) HSP 1 Score: 113.6 bits (283), Expect = 2.8e-22 Identity = 72/201 (35.82%), Postives = 112/201 (55.72%), Query Frame = 1
BLAST of CmaCh17G004150 vs. TrEMBL
Match: A0A0A0KCY3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G002350 PE=4 SV=1) HSP 1 Score: 105.1 bits (261), Expect = 9.9e-20 Identity = 63/152 (41.45%), Postives = 87/152 (57.24%), Query Frame = 1
BLAST of CmaCh17G004150 vs. TrEMBL
Match: A0A0A0KA10_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G107850 PE=4 SV=1) HSP 1 Score: 78.2 bits (191), Expect = 1.3e-11 Identity = 55/144 (38.19%), Postives = 75/144 (52.08%), Query Frame = 1
BLAST of CmaCh17G004150 vs. NCBI nr
Match: gi|700190435|gb|KGN45639.1| (hypothetical protein Csa_6G002330 [Cucumis sativus]) HSP 1 Score: 164.1 bits (414), Expect = 2.6e-37 Identity = 94/202 (46.53%), Postives = 127/202 (62.87%), Query Frame = 1
BLAST of CmaCh17G004150 vs. NCBI nr
Match: gi|659117585|ref|XP_008458679.1| (PREDICTED: uncharacterized protein LOC103498007 [Cucumis melo]) HSP 1 Score: 148.7 bits (374), Expect = 1.1e-32 Identity = 86/202 (42.57%), Postives = 121/202 (59.90%), Query Frame = 1
BLAST of CmaCh17G004150 vs. NCBI nr
Match: gi|700195983|gb|KGN51160.1| (hypothetical protein Csa_5G469020 [Cucumis sativus]) HSP 1 Score: 144.8 bits (364), Expect = 1.6e-31 Identity = 72/130 (55.38%), Postives = 97/130 (74.62%), Query Frame = 1
BLAST of CmaCh17G004150 vs. NCBI nr
Match: gi|659131739|ref|XP_008465831.1| (PREDICTED: uncharacterized protein LOC103503425 [Cucumis melo]) HSP 1 Score: 128.3 bits (321), Expect = 1.6e-26 Identity = 71/163 (43.56%), Postives = 104/163 (63.80%), Query Frame = 1
BLAST of CmaCh17G004150 vs. NCBI nr
Match: gi|659117581|ref|XP_008458677.1| (PREDICTED: uncharacterized protein LOC103498005 [Cucumis melo]) HSP 1 Score: 119.4 bits (298), Expect = 7.3e-24 Identity = 83/204 (40.69%), Postives = 115/204 (56.37%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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