CmaCh17G003200 (gene) Cucurbita maxima (Rimu)
The following sequences are available for this feature:
Legend: CDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAGTATTCAACGACGTCGTCTAAGGACAATGCAAAGCCAGCCGCCTCTTACCCCACCCGAGGAATCGGACATCCACCGGAGGTATATCCTCCACCACCAAACTACGGCGGCGGATATCCACCTGCAGGATATGCTCCGCCGCCTCCAATGCCTGGATACGGTGGATATCCGTCGCCGCCACCACCGTACGGCGCGTATCCACCGCCGTACAACACTGGGCCCTACGCTCCACAAGCCTACGGTTATCCACATCATCCGCCACCGCCGCCGGCTTATGTTTATGGTCCACCACTGCCGGGATATCCGCCAGCGACCAATGCTCCAACGACGGGTAAGAAAAAGAAAGGAAAGAGTAAAATGCTTGGATTAGGAGCGGGGTTGCTCGGTGGAGTTGTCGGAGGGCTTTTGCTCGGCGATTTTGCGGCGGATGCTGGGGCGGCAGCGCCGTCGTTTGAGTTATTTTCCGATGCCACCGGCGGCGGATTTGATCAATTGTGCGATGCAAGGATGCAATCTGTGTCCGATAGCATTGATTTGCTCGGAACCATTGGCTGA ATGGAGTATTCAACGACGTCGTCTAAGGACAATGCAAAGCCAGCCGCCTCTTACCCCACCCGAGGAATCGGACATCCACCGGAGGTATATCCTCCACCACCAAACTACGGCGGCGGATATCCACCTGCAGGATATGCTCCGCCGCCTCCAATGCCTGGATACGGTGGATATCCGTCGCCGCCACCACCGTACGGCGCGTATCCACCGCCGTACAACACTGGGCCCTACGCTCCACAAGCCTACGGTTATCCACATCATCCGCCACCGCCGCCGGCTTATGTTTATGGTCCACCACTGCCGGGATATCCGCCAGCGACCAATGCTCCAACGACGGGTAAGAAAAAGAAAGGAAAGAGTAAAATGCTTGGATTAGGAGCGGGGTTGCTCGGTGGAGTTGTCGGAGGGCTTTTGCTCGGCGATTTTGCGGCGGATGCTGGGGCGGCAGCGCCGTCGTTTGAGTTATTTTCCGATGCCACCGGCGGCGGATTTGATCAATTGTGCGATGCAAGGATGCAATCTGTGTCCGATAGCATTGATTTGCTCGGAACCATTGGCTGA ATGGAGTATTCAACGACGTCGTCTAAGGACAATGCAAAGCCAGCCGCCTCTTACCCCACCCGAGGAATCGGACATCCACCGGAGGTATATCCTCCACCACCAAACTACGGCGGCGGATATCCACCTGCAGGATATGCTCCGCCGCCTCCAATGCCTGGATACGGTGGATATCCGTCGCCGCCACCACCGTACGGCGCGTATCCACCGCCGTACAACACTGGGCCCTACGCTCCACAAGCCTACGGTTATCCACATCATCCGCCACCGCCGCCGGCTTATGTTTATGGTCCACCACTGCCGGGATATCCGCCAGCGACCAATGCTCCAACGACGGGTAAGAAAAAGAAAGGAAAGAGTAAAATGCTTGGATTAGGAGCGGGGTTGCTCGGTGGAGTTGTCGGAGGGCTTTTGCTCGGCGATTTTGCGGCGGATGCTGGGGCGGCAGCGCCGTCGTTTGAGTTATTTTCCGATGCCACCGGCGGCGGATTTGATCAATTGTGCGATGCAAGGATGCAATCTGTGTCCGATAGCATTGATTTGCTCGGAACCATTGGCTGA MEYSTTSSKDNAKPAASYPTRGIGHPPEVYPPPPNYGGGYPPAGYAPPPPMPGYGGYPSPPPPYGAYPPPYNTGPYAPQAYGYPHHPPPPPAYVYGPPLPGYPPATNAPTTGKKKKGKSKMLGLGAGLLGGVVGGLLLGDFAADAGAAAPSFELFSDATGGGFDQLCDARMQSVSDSIDLLGTIG
BLAST of CmaCh17G003200 vs. TrEMBL
Match: B9HSC2_POPTR (Shock protein SRC2 OS=Populus trichocarpa GN=POPTR_0010s02500g PE=4 SV=1) HSP 1 Score: 79.3 bits (194), Expect = 5.3e-12 Identity = 75/166 (45.18%), Postives = 89/166 (53.61%), Query Frame = 1
BLAST of CmaCh17G003200 vs. TrEMBL
Match: Q1EPG0_MUSAC (C2 domain-containing protein / XYPPX domain-containing protein OS=Musa acuminata GN=MA4_106O17.64 PE=4 SV=1) HSP 1 Score: 74.7 bits (182), Expect = 1.3e-10 Identity = 67/154 (43.51%), Postives = 75/154 (48.70%), Query Frame = 1
BLAST of CmaCh17G003200 vs. TrEMBL
Match: A0A0D2NYW5_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_006G263800 PE=4 SV=1) HSP 1 Score: 72.0 bits (175), Expect = 8.5e-10 Identity = 67/142 (47.18%), Postives = 74/142 (52.11%), Query Frame = 1
BLAST of CmaCh17G003200 vs. TrEMBL
Match: A0A068VIN7_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00001816001 PE=4 SV=1) HSP 1 Score: 71.6 bits (174), Expect = 1.1e-09 Identity = 79/182 (43.41%), Postives = 90/182 (49.45%), Query Frame = 1
BLAST of CmaCh17G003200 vs. TrEMBL
Match: A0A068VG03_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00005162001 PE=4 SV=1) HSP 1 Score: 68.9 bits (167), Expect = 7.2e-09 Identity = 66/156 (42.31%), Postives = 76/156 (48.72%), Query Frame = 1
BLAST of CmaCh17G003200 vs. TAIR10
Match: AT3G16510.1 (AT3G16510.1 Calcium-dependent lipid-binding (CaLB domain) family protein) HSP 1 Score: 49.7 bits (117), Expect = 2.3e-06 Identity = 57/152 (37.50%), Postives = 68/152 (44.74%), Query Frame = 1
BLAST of CmaCh17G003200 vs. NCBI nr
Match: gi|1009163579|ref|XP_015900043.1| (PREDICTED: protein SRC2-like [Ziziphus jujuba]) HSP 1 Score: 85.5 bits (210), Expect = 1.1e-13 Identity = 77/168 (45.83%), Postives = 90/168 (53.57%), Query Frame = 1
BLAST of CmaCh17G003200 vs. NCBI nr
Match: gi|658035404|ref|XP_008353231.1| (PREDICTED: protein diaphanous homolog 1-like [Malus domestica]) HSP 1 Score: 79.7 bits (195), Expect = 5.8e-12 Identity = 73/149 (48.99%), Postives = 82/149 (55.03%), Query Frame = 1
BLAST of CmaCh17G003200 vs. NCBI nr
Match: gi|224110568|ref|XP_002315561.1| (shock protein SRC2 [Populus trichocarpa]) HSP 1 Score: 79.3 bits (194), Expect = 7.6e-12 Identity = 75/166 (45.18%), Postives = 89/166 (53.61%), Query Frame = 1
BLAST of CmaCh17G003200 vs. NCBI nr
Match: gi|743902368|ref|XP_011044520.1| (PREDICTED: actin cytoskeleton-regulatory complex protein pan-1-like [Populus euphratica]) HSP 1 Score: 77.4 bits (189), Expect = 2.9e-11 Identity = 75/177 (42.37%), Postives = 93/177 (52.54%), Query Frame = 1
BLAST of CmaCh17G003200 vs. NCBI nr
Match: gi|102139812|gb|ABF69997.1| (C2 domain-containing protein / XYPPX domain-containing protein [Musa acuminata]) HSP 1 Score: 74.7 bits (182), Expect = 1.9e-10 Identity = 67/154 (43.51%), Postives = 75/154 (48.70%), Query Frame = 1
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |