CmaCh17G001710 (gene) Cucurbita maxima (Rimu)

Overview
NameCmaCh17G001710
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu))
DescriptionCASP-like protein
LocationCma_Chr17 : 886954 .. 889458 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCACCCAGGATTGATAATCGCTTCAAAACCCATAAGCCAGAAGCCATCAACATCCGCATTACCCTGTTTTCTGGCGTTGATTGAACGATCTGTTTAGATTTTGCTGATTAGGGTTTCTGGGTTTTGATTTGCGGCATGATTTTGTGAAAATGGTGGGGTTTTGAGGGTATTCTGTGGATTGTGGATGAAGAATTGGAGGAAAACATGTTGGATTTTGCTGGGACTCCAGGGACATTGACTGGGCTTGTGTTGAGGCTTTTGCAATGTGCTTTTGCTGCTGGGGCTGTTGCTTCCATGGCTACCTCTGTTGGCTTCTATAACTTCACTGCTTTTTGGTATTTATTGATTCTTCCCCTTCTCTTCTTTTGGCTTGATTAGTATTTATTTTGCATTGTAATTCTTTCCTTTTAGTACTGATTTGGCTGCTTTTGGTTATGGCTTTTCATTGCTGCTTTGTAAGTTTGAAGATAGCTATAAGTTGAATAGAGCACTCACGTCAGTTAGAGAAGTGAATGAAGGACTTCTTATAAGGGTGTTGAAACCTCTTCCTAGTAGATGTGTTTTAAAAACCTTGAGACTAACGGCAATACGTAATAGGTCAAAGTGGACAATATCTGTTAGTGGTAGGCTTGGGTTGTTACAAATGGTATTAGAGCTAGACACTGGACGATGTGGTAGCGAGGACGCTGGCCCCCAAGGGGGTGGATTGTGAGATCTCACGTTGGTTGGAGAGGGGAACAAAACATTTCTTAAAAGGGTGTGGAAACATCTCCCTAGTAGACACGTTTTAGAAACCGTGAAAGCGGGCAATATCTCTTAGTAGTAGGCTTGGGCTGTTACAAATGACATCAGAGCCAGACATAGGGCAGTGTGCCAACAAGAATGCTGGCCCCCAAGGAGATGGATTGTGAGATCCCACATCGGTTGGAGAGGGGAACGAAGCATCCCTTATAAAGGTGTGGAAACCTCTCCCTAGTATACGCGTTTTAAAAACTGTGAAGCTGACGGCGATATGTAATGGGCCAAAGCGGACGATATCTGATAGCAGGTAGGCTTGGACTGTTACAAATGCTATTAAAGCCAGACATCAGGCGGTTTGCCAGCGAGGATGCTGGTCTTCCAAAGGAGTGGATTGTGAGATCCCACATCGGTTGGAGAAGGGAACAAAGCACTCTTTATAAGGGTGTGGAAACCTCTCCCTAGTCGACGCGTTTTAAAAACCATGAGGCTGATGACGATACGTAGCGGGCCAAAACAGACAATATTTGTTAGCAGTAGGCTTGGGCTATTACAAATGCTATCAAAGCCAGACATTAGGTGGTGTGCCAGCGAGGATGCTGGCCCCCCAAAAGGAGTGGATTGTGAGATCCCACATCGGTTGGAGAAGGGAATGAAACACTTCTTATAAGGGTGCGGAAATCTCTTCTTAGTAGACGCATTTTAAAAACTGGTGATACATAACGGGCAAAAGTGGACGATATCTGTTAGTGGGAGGCTTGGGCTGTTATAAATGGTATCAGAGCCAGACACCGGGTGGGTATGCTAGCGAGGACGTTGGCCCCCAAGGGGGGTGGATTGTAAAATCCCACATCGGTTGGAGTGGGAAACGAAGCACTCCTTACAATTGTGTGAAAACCGCAAAGCAGACAGTAACGGGCCAAAGCGAATTGGGTTTGACTGTTACATTTTCGGTGTCTATCTTCTTCATTTCCATTCATTTGATACGGGAAGTGTTTGTTACAAGTTTGAACTTAGTTTCTTTCTAAATAACCCTTTTCTTGTTTTACATTAACTCATAAAACAGTGATTGAGAAATCAGTGAAAATAGTTATAGAAGAAACTGTGAGATGCCCTCTGATACCATACGAACTCTGAATTTTATGTAAAGTTATCAAATTTGAGATGATATACGACACGAATTAAACTCCGAGTTTGTGATTGAATCGTGATTTGCAGCTACGTGATCGCGTCGATGGGCCTGCAACTGACATGGAGTTTTATGCTGGCATTGTTAGATGCATATGCTTTGTTAAGGAAGAAGATGCTTCACAATCCTATTCTGGTCAGCCTCTTTGTAGTTGGGGATTGGGTGAGGCACTAAAACACCTACAAAACTCTGAGTTGTTTTAGATTATAGGGAAGTTCAAGCATTTATTCAGTTTTTGGTTTTCAGGTGACAGCAACATTGTCTCTTGCTGCAGCTTCCGCCTCGGGCGGGGTAGCTGTATTGTTCTTCAGTGACTTAGGACGCTGCAGTTTCGGCAACGAATGTCGAAACTTCCAAATCTCTGTTGTTTTAGCCTTCCTAAGCTGGATAACCATAGCCATTTCATCTCTGATTATGCTCTGGATATTGGCTGCAGTTTGAACACAAACTCGTACCGGGGACGAATGTCGAAAGTTCCAAATCTCTGTTGTTTTAGCCTCCCTAAGCTGGATAATCATAGCCATTTCAGCTCGGATTATGCTCTGGACACTGGCTGCACTCGAAATCTTTCATAA

mRNA sequence

ATGGCACCCAGGATTGATAATCGCTTCAAAACCCATAAGCCAGAAGCCATCAACATCCGCATTACCCTCTACGTGATCGCGTCGATGGGCCTGCAACTGACATGGAGTTTTATGCTGGCATTGTTAGATGCATATGCTTTGTTAAGGAAGAAGATGCTTCACAATCCTATTCTGGTCAGCCTCTTTGTAGTTGGGGATTGGGTGACAGCAACATTGTCTCTTGCTGCAGCTTCCGCCTCGGGCGGGGTAGCTGTATTGACGCTGCAGTTTCGGCAACGAATGTCGAAACTTCCAAATCTCTGTTGTTTTAGCCTTCCTAAGCTGGATAACCATAGCCATTTCATCTCTGATTATGCTCTGGATATTGGCTGCAGTTTGAACACAAACTCGTACCGGGGACGAATGTCGAAAGTTCCAAATCTCTGTTGTTTTAGCCTCCCTAAGCTGGATAATCATAGCCATTTCAGCTCGGATTATGCTCTGGACACTGGCTGCACTCGAAATCTTTCATAA

Coding sequence (CDS)

ATGGCACCCAGGATTGATAATCGCTTCAAAACCCATAAGCCAGAAGCCATCAACATCCGCATTACCCTCTACGTGATCGCGTCGATGGGCCTGCAACTGACATGGAGTTTTATGCTGGCATTGTTAGATGCATATGCTTTGTTAAGGAAGAAGATGCTTCACAATCCTATTCTGGTCAGCCTCTTTGTAGTTGGGGATTGGGTGACAGCAACATTGTCTCTTGCTGCAGCTTCCGCCTCGGGCGGGGTAGCTGTATTGACGCTGCAGTTTCGGCAACGAATGTCGAAACTTCCAAATCTCTGTTGTTTTAGCCTTCCTAAGCTGGATAACCATAGCCATTTCATCTCTGATTATGCTCTGGATATTGGCTGCAGTTTGAACACAAACTCGTACCGGGGACGAATGTCGAAAGTTCCAAATCTCTGTTGTTTTAGCCTCCCTAAGCTGGATAATCATAGCCATTTCAGCTCGGATTATGCTCTGGACACTGGCTGCACTCGAAATCTTTCATAA

Protein sequence

MAPRIDNRFKTHKPEAINIRITLYVIASMGLQLTWSFMLALLDAYALLRKKMLHNPILVSLFVVGDWVTATLSLAAASASGGVAVLTLQFRQRMSKLPNLCCFSLPKLDNHSHFISDYALDIGCSLNTNSYRGRMSKVPNLCCFSLPKLDNHSHFSSDYALDTGCTRNLS
Homology
[Close]
BLAST of CmaCh17G001710 vs. Swiss-Prot
Match: CSPLI_MAIZE (CASP-like protein 5B3 OS=Zea mays PE=2 SV=1)

HSP 1 Score: 90.1 bits (222), Expect = 2.5e-17
Identity = 50/79 (63.29%), Postives = 56/79 (70.89%), Query Frame = 1 

Query: 24  YVIASMGLQLTWSFMLALLDAYALLRKKMLHNPILVSLFVVGDWVTATLSLAAASASGGV 83
           Y+IASMGLQL WSF LA LD Y+L  K+ LHNP+LVSLFVVGDWVTA LS AAASAS GV
Sbjct: 45  YLIASMGLQLLWSFGLACLDVYSLKTKRDLHNPVLVSLFVVGDWVTAILSFAAASASAGV 104

Query: 84  AVLTLQFRQRMSKLPNLCC 103
            +L  +        P L C
Sbjct: 105 TILFERDVHFCRMYPQLSC 123

[Close]
BLAST of CmaCh17G001710 vs. Swiss-Prot
Match: CSPLQ_ORYSI (CASP-like protein 5B3 OS=Oryza sativa subsp. indica GN=OsI_30532 PE=3 SV=1)

HSP 1 Score: 89.7 bits (221), Expect = 3.2e-17
Identity = 50/79 (63.29%), Postives = 56/79 (70.89%), Query Frame = 1 

Query: 24  YVIASMGLQLTWSFMLALLDAYALLRKKMLHNPILVSLFVVGDWVTATLSLAAASASGGV 83
           Y+IASMGLQL WSF LA LD Y+L  K+ LHNP+LVSLFVVGDWVTA LS AAASAS GV
Sbjct: 45  YLIASMGLQLLWSFGLACLDIYSLQTKRDLHNPVLVSLFVVGDWVTAILSFAAASASAGV 104

Query: 84  AVLTLQFRQRMSKLPNLCC 103
            +L  +        P L C
Sbjct: 105 TILFERDVHFCRMYPQLSC 123

[Close]
BLAST of CmaCh17G001710 vs. Swiss-Prot
Match: CSPLQ_ORYSJ (CASP-like protein 5B3 OS=Oryza sativa subsp. japonica GN=Os09g0249400 PE=2 SV=1)

HSP 1 Score: 89.7 bits (221), Expect = 3.2e-17
Identity = 50/79 (63.29%), Postives = 56/79 (70.89%), Query Frame = 1 

Query: 24  YVIASMGLQLTWSFMLALLDAYALLRKKMLHNPILVSLFVVGDWVTATLSLAAASASGGV 83
           Y+IASMGLQL WSF LA LD Y+L  K+ LHNP+LVSLFVVGDWVTA LS AAASAS GV
Sbjct: 45  YLIASMGLQLLWSFGLACLDIYSLQTKRDLHNPVLVSLFVVGDWVTAILSFAAASASAGV 104

Query: 84  AVLTLQFRQRMSKLPNLCC 103
            +L  +        P L C
Sbjct: 105 TILFERDVHFCRMYPQLSC 123

[Close]
BLAST of CmaCh17G001710 vs. Swiss-Prot
Match: CSPLI_ARATH (CASP-like protein 5B2 OS=Arabidopsis thaliana GN=At3g53850 PE=2 SV=1)

HSP 1 Score: 87.4 bits (215), Expect = 1.6e-16
Identity = 49/63 (77.78%), Postives = 51/63 (80.95%), Query Frame = 1 

Query: 24  YVIASMGLQLTWSFMLALLDAYALLRKKMLHNPILVSLFVVGDWVTATLSLAAASASGGV 83
           Y+IASMGLQL WSF LA LD YAL  KK L NPILVSLFVVGDWVTA LSLAAA +S GV
Sbjct: 45  YLIASMGLQLLWSFGLACLDVYALRGKKDLQNPILVSLFVVGDWVTAMLSLAAACSSAGV 104

Query: 84  AVL 87
            VL
Sbjct: 105 VVL 107

[Close]
BLAST of CmaCh17G001710 vs. Swiss-Prot
Match: CSPLG_ARATH (CASP-like protein 5B3 OS=Arabidopsis thaliana GN=At3g23200 PE=2 SV=1)

HSP 1 Score: 87.0 bits (214), Expect = 2.1e-16
Identity = 44/63 (69.84%), Postives = 55/63 (87.30%), Query Frame = 1 

Query: 24  YVIASMGLQLTWSFMLALLDAYALLRKKMLHNPILVSLFVVGDWVTATLSLAAASASGGV 83
           Y+IA+MGLQ+ WSF LA+LD +AL+RKK L +P+LVSLFVVGDWVT+TLSLA AS+S G+
Sbjct: 45  YLIAAMGLQVIWSFGLAILDTFALVRKKTLLSPVLVSLFVVGDWVTSTLSLAGASSSAGI 104

Query: 84  AVL 87
            VL
Sbjct: 105 TVL 107

[Close]
BLAST of CmaCh17G001710 vs. TrEMBL
Match: A0A0A0LIJ4_CUCSA (CASP-like protein OS=Cucumis sativus GN=Csa_2G179230 PE=3 SV=1)

HSP 1 Score: 113.2 bits (282), Expect = 3.1e-22
Identity = 61/69 (88.41%), Postives = 63/69 (91.30%), Query Frame = 1 

Query: 18  NIRITLYVIASMGLQLTWSFMLALLDAYALLRKKMLHNPILVSLFVVGDWVTATLSLAAA 77
           N     YVIASMGLQ+TWS MLALLDAYAL+RKKMLHNPILVSLFVVGDWVTATLSLAAA
Sbjct: 39  NFTAFCYVIASMGLQVTWSLMLALLDAYALVRKKMLHNPILVSLFVVGDWVTATLSLAAA 98

Query: 78  SASGGVAVL 87
           SASGGVAVL
Sbjct: 99  SASGGVAVL 107

[Close]
BLAST of CmaCh17G001710 vs. TrEMBL
Match: I3S4F7_LOTJA (CASP-like protein OS=Lotus japonicus PE=2 SV=1)

HSP 1 Score: 106.7 bits (265), Expect = 2.9e-20
Identity = 55/76 (72.37%), Postives = 63/76 (82.89%), Query Frame = 1 

Query: 11  THKPEAINIRITLYVIASMGLQLTWSFMLALLDAYALLRKKMLHNPILVSLFVVGDWVTA 70
           T  P   N     Y+IASMGLQ+ WSFMLALLDAYAL++KK+LHNP+LVSLFVVGDWVTA
Sbjct: 32  TTTPSFFNFTAFCYLIASMGLQVIWSFMLALLDAYALVKKKVLHNPLLVSLFVVGDWVTA 91

Query: 71  TLSLAAASASGGVAVL 87
            LSLAAAS+SGG+ VL
Sbjct: 92  ILSLAAASSSGGITVL 107

[Close]
BLAST of CmaCh17G001710 vs. TrEMBL
Match: V7BGS2_PHAVU (CASP-like protein OS=Phaseolus vulgaris GN=PHAVU_007G128700g PE=3 SV=1)

HSP 1 Score: 102.4 bits (254), Expect = 5.4e-19
Identity = 53/73 (72.60%), Postives = 61/73 (83.56%), Query Frame = 1 

Query: 14  PEAINIRITLYVIASMGLQLTWSFMLALLDAYALLRKKMLHNPILVSLFVVGDWVTATLS 73
           P   N     Y+IASMGLQ+ WSF+LALLDAYAL+RKK+LHN +LVSLFVVGDWVTATLS
Sbjct: 35  PSFFNFTAFCYLIASMGLQVIWSFVLALLDAYALVRKKVLHNAVLVSLFVVGDWVTATLS 94

Query: 74  LAAASASGGVAVL 87
           LAAAS+S G+ VL
Sbjct: 95  LAAASSSAGITVL 107

[Close]
BLAST of CmaCh17G001710 vs. TrEMBL
Match: A0A151T193_CAJCA (CASP-like protein OS=Cajanus cajan GN=KK1_023213 PE=3 SV=1)

HSP 1 Score: 101.3 bits (251), Expect = 1.2e-18
Identity = 52/73 (71.23%), Postives = 61/73 (83.56%), Query Frame = 1 

Query: 14  PEAINIRITLYVIASMGLQLTWSFMLALLDAYALLRKKMLHNPILVSLFVVGDWVTATLS 73
           P   N     Y+IASMGLQ+ WSF+LALLDAYAL++KK+LHN +LVSLFVVGDWVTATLS
Sbjct: 35  PSFFNFTAFCYLIASMGLQVIWSFVLALLDAYALVKKKVLHNAVLVSLFVVGDWVTATLS 94

Query: 74  LAAASASGGVAVL 87
           LAAAS+S G+ VL
Sbjct: 95  LAAASSSAGITVL 107

[Close]
BLAST of CmaCh17G001710 vs. TrEMBL
Match: I1LCC7_SOYBN (CASP-like protein OS=Glycine max GN=GLYMA_10G187800 PE=3 SV=1)

HSP 1 Score: 101.3 bits (251), Expect = 1.2e-18
Identity = 52/73 (71.23%), Postives = 61/73 (83.56%), Query Frame = 1 

Query: 14  PEAINIRITLYVIASMGLQLTWSFMLALLDAYALLRKKMLHNPILVSLFVVGDWVTATLS 73
           P   N     Y+IASMGLQ+ WSF+LALLDAYAL++KK+LHN +LVSLFVVGDWVTATLS
Sbjct: 35  PSFFNFTAFCYLIASMGLQVIWSFVLALLDAYALVKKKVLHNAVLVSLFVVGDWVTATLS 94

Query: 74  LAAASASGGVAVL 87
           LAAAS+S G+ VL
Sbjct: 95  LAAASSSAGITVL 107

[Close]
BLAST of CmaCh17G001710 vs. TAIR10
Match: AT3G53850.1 (AT3G53850.1 Uncharacterised protein family (UPF0497))

HSP 1 Score: 87.4 bits (215), Expect = 9.1e-18
Identity = 49/63 (77.78%), Postives = 51/63 (80.95%), Query Frame = 1 

Query: 24  YVIASMGLQLTWSFMLALLDAYALLRKKMLHNPILVSLFVVGDWVTATLSLAAASASGGV 83
           Y+IASMGLQL WSF LA LD YAL  KK L NPILVSLFVVGDWVTA LSLAAA +S GV
Sbjct: 45  YLIASMGLQLLWSFGLACLDVYALRGKKDLQNPILVSLFVVGDWVTAMLSLAAACSSAGV 104

Query: 84  AVL 87
            VL
Sbjct: 105 VVL 107

[Close]
BLAST of CmaCh17G001710 vs. TAIR10
Match: AT3G23200.1 (AT3G23200.1 Uncharacterised protein family (UPF0497))

HSP 1 Score: 87.0 bits (214), Expect = 1.2e-17
Identity = 44/63 (69.84%), Postives = 55/63 (87.30%), Query Frame = 1 

Query: 24  YVIASMGLQLTWSFMLALLDAYALLRKKMLHNPILVSLFVVGDWVTATLSLAAASASGGV 83
           Y+IA+MGLQ+ WSF LA+LD +AL+RKK L +P+LVSLFVVGDWVT+TLSLA AS+S G+
Sbjct: 45  YLIAAMGLQVIWSFGLAILDTFALVRKKTLLSPVLVSLFVVGDWVTSTLSLAGASSSAGI 104

Query: 84  AVL 87
            VL
Sbjct: 105 TVL 107

[Close]
BLAST of CmaCh17G001710 vs. TAIR10
Match: AT5G02060.1 (AT5G02060.1 Uncharacterised protein family (UPF0497))

HSP 1 Score: 82.4 bits (202), Expect = 2.9e-16
Identity = 45/79 (56.96%), Postives = 56/79 (70.89%), Query Frame = 1 

Query: 24  YVIASMGLQLTWSFMLALLDAYALLRKKMLHNPILVSLFVVGDWVTATLSLAAASASGGV 83
           +++ASMGLQL WSF LA LD YA+ RK  L +PIL+SLF VGDWVTA L+LAAA +S GV
Sbjct: 45  FLVASMGLQLIWSFGLACLDVYAIRRKSDLRSPILLSLFTVGDWVTALLALAAACSSAGV 104

Query: 84  AVLTLQFRQRMSKLPNLCC 103
            VL  +  +   + P L C
Sbjct: 105 TVLFTKDTEFCRQQPALSC 123

[Close]
BLAST of CmaCh17G001710 vs. TAIR10
Match: AT2G28370.1 (AT2G28370.1 Uncharacterised protein family (UPF0497))

HSP 1 Score: 65.9 bits (159), Expect = 2.8e-11
Identity = 34/63 (53.97%), Postives = 46/63 (73.02%), Query Frame = 1 

Query: 24  YVIASMGLQLTWSFMLALLDAYALLRKKMLHNPILVSLFVVGDWVTATLSLAAASASGGV 83
           Y++A+ GLQ  WS  LA++D YA++ K+ L N  LVSLF +GD VT+TL+ AAA AS G+
Sbjct: 73  YLVAATGLQSLWSLALAMVDVYAIMVKRSLQNRRLVSLFAIGDGVTSTLTFAAACASAGI 132

Query: 84  AVL 87
            VL
Sbjct: 133 TVL 135

[Close]
BLAST of CmaCh17G001710 vs. TAIR10
Match: AT2G37200.1 (AT2G37200.1 Uncharacterised protein family (UPF0497))

HSP 1 Score: 57.4 bits (137), Expect = 1.0e-08
Identity = 30/62 (48.39%), Postives = 43/62 (69.35%), Query Frame = 1 

Query: 25  VIASMGLQLTWSFMLALLDAYALLRKKMLHNPILVSLFVVGDWVTATLSLAAASASGGVA 84
           ++ ++ LQ  WS  L ++DAYALL ++ L N  +V  F +GD VT+TL+ AAASAS G+ 
Sbjct: 76  LVLAVSLQSLWSLSLFIIDAYALLVRRSLRNHSVVQCFTIGDGVTSTLTFAAASASAGIT 135

Query: 85  VL 87
           VL
Sbjct: 136 VL 137

[Close]
BLAST of CmaCh17G001710 vs. NCBI nr
Match: gi|449448860|ref|XP_004142183.1| (PREDICTED: CASP-like protein 5B3 isoform X1 [Cucumis sativus])

HSP 1 Score: 113.2 bits (282), Expect = 4.4e-22
Identity = 61/69 (88.41%), Postives = 63/69 (91.30%), Query Frame = 1 

Query: 18  NIRITLYVIASMGLQLTWSFMLALLDAYALLRKKMLHNPILVSLFVVGDWVTATLSLAAA 77
           N     YVIASMGLQ+TWS MLALLDAYAL+RKKMLHNPILVSLFVVGDWVTATLSLAAA
Sbjct: 39  NFTAFCYVIASMGLQVTWSLMLALLDAYALVRKKMLHNPILVSLFVVGDWVTATLSLAAA 98

Query: 78  SASGGVAVL 87
           SASGGVAVL
Sbjct: 99  SASGGVAVL 107

[Close]
BLAST of CmaCh17G001710 vs. NCBI nr
Match: gi|659121380|ref|XP_008460631.1| (PREDICTED: CASP-like protein At3g23200 isoform X1 [Cucumis melo])

HSP 1 Score: 113.2 bits (282), Expect = 4.4e-22
Identity = 61/69 (88.41%), Postives = 63/69 (91.30%), Query Frame = 1 

Query: 18  NIRITLYVIASMGLQLTWSFMLALLDAYALLRKKMLHNPILVSLFVVGDWVTATLSLAAA 77
           N     YVIASMGLQ+TWS MLALLDAYAL+RKKMLHNPILVSLFVVGDWVTATLSLAAA
Sbjct: 39  NFTAFCYVIASMGLQVTWSLMLALLDAYALVRKKMLHNPILVSLFVVGDWVTATLSLAAA 98

Query: 78  SASGGVAVL 87
           SASGGVAVL
Sbjct: 99  SASGGVAVL 107

[Close]
BLAST of CmaCh17G001710 vs. NCBI nr
Match: gi|388494166|gb|AFK35149.1| (unknown [Lotus japonicus])

HSP 1 Score: 106.7 bits (265), Expect = 4.1e-20
Identity = 55/76 (72.37%), Postives = 63/76 (82.89%), Query Frame = 1 

Query: 11  THKPEAINIRITLYVIASMGLQLTWSFMLALLDAYALLRKKMLHNPILVSLFVVGDWVTA 70
           T  P   N     Y+IASMGLQ+ WSFMLALLDAYAL++KK+LHNP+LVSLFVVGDWVTA
Sbjct: 32  TTTPSFFNFTAFCYLIASMGLQVIWSFMLALLDAYALVKKKVLHNPLLVSLFVVGDWVTA 91

Query: 71  TLSLAAASASGGVAVL 87
            LSLAAAS+SGG+ VL
Sbjct: 92  ILSLAAASSSGGITVL 107

[Close]
BLAST of CmaCh17G001710 vs. NCBI nr
Match: gi|593686856|ref|XP_007144099.1| (hypothetical protein PHAVU_007G128700g [Phaseolus vulgaris])

HSP 1 Score: 102.4 bits (254), Expect = 7.7e-19
Identity = 53/73 (72.60%), Postives = 61/73 (83.56%), Query Frame = 1 

Query: 14  PEAINIRITLYVIASMGLQLTWSFMLALLDAYALLRKKMLHNPILVSLFVVGDWVTATLS 73
           P   N     Y+IASMGLQ+ WSF+LALLDAYAL+RKK+LHN +LVSLFVVGDWVTATLS
Sbjct: 35  PSFFNFTAFCYLIASMGLQVIWSFVLALLDAYALVRKKVLHNAVLVSLFVVGDWVTATLS 94

Query: 74  LAAASASGGVAVL 87
           LAAAS+S G+ VL
Sbjct: 95  LAAASSSAGITVL 107

[Close]
BLAST of CmaCh17G001710 vs. NCBI nr
Match: gi|764567768|ref|XP_011462259.1| (PREDICTED: CASP-like protein 5B3 isoform X2 [Fragaria vesca subsp. vesca])

HSP 1 Score: 101.7 bits (252), Expect = 1.3e-18
Identity = 52/69 (75.36%), Postives = 60/69 (86.96%), Query Frame = 1 

Query: 18  NIRITLYVIASMGLQLTWSFMLALLDAYALLRKKMLHNPILVSLFVVGDWVTATLSLAAA 77
           N     Y+IASMGLQ+ WSF+LALLDAY+L++KK LHNP+LVSLFVVGDWVTATLSLAAA
Sbjct: 39  NFTAFCYLIASMGLQVIWSFVLALLDAYSLMKKKALHNPVLVSLFVVGDWVTATLSLAAA 98

Query: 78  SASGGVAVL 87
           SAS G+ VL
Sbjct: 99  SASAGITVL 107

The following BLAST results are available for this feature:
BLAST of CmaCh17G001710 vs. Swiss-Prot
Match NameE-valueIdentityDescription
CSPLI_MAIZE2.5e-1763.29CASP-like protein 5B3 OS=Zea mays PE=2 SV=1[more]
CSPLQ_ORYSI3.2e-1763.29CASP-like protein 5B3 OS=Oryza sativa subsp. indica GN=OsI_30532 PE=3 SV=1[more]
CSPLQ_ORYSJ3.2e-1763.29CASP-like protein 5B3 OS=Oryza sativa subsp. japonica GN=Os09g0249400 PE=2 SV=1[more]
CSPLI_ARATH1.6e-1677.78CASP-like protein 5B2 OS=Arabidopsis thaliana GN=At3g53850 PE=2 SV=1[more]
CSPLG_ARATH2.1e-1669.84CASP-like protein 5B3 OS=Arabidopsis thaliana GN=At3g23200 PE=2 SV=1[more]
BLAST of CmaCh17G001710 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LIJ4_CUCSA3.1e-2288.41CASP-like protein OS=Cucumis sativus GN=Csa_2G179230 PE=3 SV=1[more]
I3S4F7_LOTJA2.9e-2072.37CASP-like protein OS=Lotus japonicus PE=2 SV=1[more]
V7BGS2_PHAVU5.4e-1972.60CASP-like protein OS=Phaseolus vulgaris GN=PHAVU_007G128700g PE=3 SV=1[more]
A0A151T193_CAJCA1.2e-1871.23CASP-like protein OS=Cajanus cajan GN=KK1_023213 PE=3 SV=1[more]
I1LCC7_SOYBN1.2e-1871.23CASP-like protein OS=Glycine max GN=GLYMA_10G187800 PE=3 SV=1[more]
BLAST of CmaCh17G001710 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G53850.19.1e-1877.78 Uncharacterised protein family (UPF0497)[more]
AT3G23200.11.2e-1769.84 Uncharacterised protein family (UPF0497)[more]
AT5G02060.12.9e-1656.96 Uncharacterised protein family (UPF0497)[more]
AT2G28370.12.8e-1153.97 Uncharacterised protein family (UPF0497)[more]
AT2G37200.11.0e-0848.39 Uncharacterised protein family (UPF0497)[more]
BLAST of CmaCh17G001710 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449448860|ref|XP_004142183.1|4.4e-2288.41PREDICTED: CASP-like protein 5B3 isoform X1 [Cucumis sativus][more]
gi|659121380|ref|XP_008460631.1|4.4e-2288.41PREDICTED: CASP-like protein At3g23200 isoform X1 [Cucumis melo][more]
gi|388494166|gb|AFK35149.1|4.1e-2072.37unknown [Lotus japonicus][more]
gi|593686856|ref|XP_007144099.1|7.7e-1972.60hypothetical protein PHAVU_007G128700g [Phaseolus vulgaris][more]
gi|764567768|ref|XP_011462259.1|1.3e-1875.36PREDICTED: CASP-like protein 5B3 isoform X2 [Fragaria vesca subsp. vesca][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR006702CASP_dom
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0005886 plasma membrane
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh17G001710.1CmaCh17G001710.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006702Domain of unknown function DUF588PFAMPF04535DUF588coord: 24..101
score: 4.3
NoneNo IPR availablePANTHERPTHR32021FAMILY NOT NAMEDcoord: 24..86
score: 9.1
NoneNo IPR availablePANTHERPTHR32021:SF0SUBFAMILY NOT NAMEDcoord: 24..86
score: 9.1

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmaCh17G001710CmoCh17G001680Cucurbita moschata (Rifu)cmacmoB353
CmaCh17G001710CmoCh08G010650Cucurbita moschata (Rifu)cmacmoB365
CmaCh17G001710Lsi05G017180Bottle gourd (USVL1VR-Ls)cmalsiB356
CmaCh17G001710Lsi09G012440Bottle gourd (USVL1VR-Ls)cmalsiB331
CmaCh17G001710Cp4.1LG12g01510Cucurbita pepo (Zucchini)cmacpeB371
CmaCh17G001710Cp4.1LG17g01810Cucurbita pepo (Zucchini)cmacpeB388
CmaCh17G001710Cp4.1LG03g10060Cucurbita pepo (Zucchini)cmacpeB402
CmaCh17G001710MELO3C022979.2Melon (DHL92) v3.6.1cmamedB394
CmaCh17G001710MELO3C006436.2Melon (DHL92) v3.6.1cmamedB398
CmaCh17G001710CsaV3_3G012220Cucumber (Chinese Long) v3cmacucB0425
CmaCh17G001710Cla97C06G116490Watermelon (97103) v2cmawmbB377
CmaCh17G001710Cla97C05G085230Watermelon (97103) v2cmawmbB366
CmaCh17G001710Bhi12G001444Wax gourdcmawgoB0455
CmaCh17G001710CsGy2G010510Cucumber (Gy14) v2cgybcmaB193
CmaCh17G001710CsGy3G012210Cucumber (Gy14) v2cgybcmaB345
CmaCh17G001710Carg16565Silver-seed gourdcarcmaB0326
CmaCh17G001710Carg10080Silver-seed gourdcarcmaB0314
CmaCh17G001710Carg10957Silver-seed gourdcarcmaB1489
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
CmaCh17G001710CmaCh14G018040Cucurbita maxima (Rimu)cmacmaB249
CmaCh17G001710CmaCh08G010900Cucurbita maxima (Rimu)cmacmaB373
The following block(s) are covering this gene:
GeneOrganismBlock
CmaCh17G001710Cucumber (Chinese Long) v3cmacucB0418
CmaCh17G001710Watermelon (97103) v2cmawmbB392
CmaCh17G001710Wax gourdcmawgoB0497
CmaCh17G001710Cucurbita maxima (Rimu)cmacmaB369
CmaCh17G001710Cucumber (Gy14) v1cgycmaB0715
CmaCh17G001710Cucumber (Gy14) v1cgycmaB1055
CmaCh17G001710Cucurbita moschata (Rifu)cmacmoB350
CmaCh17G001710Cucurbita moschata (Rifu)cmacmoB362
CmaCh17G001710Wild cucumber (PI 183967)cmacpiB354
CmaCh17G001710Wild cucumber (PI 183967)cmacpiB360
CmaCh17G001710Cucumber (Chinese Long) v2cmacuB350
CmaCh17G001710Cucumber (Chinese Long) v2cmacuB356
CmaCh17G001710Melon (DHL92) v3.5.1cmameB338
CmaCh17G001710Melon (DHL92) v3.5.1cmameB344
CmaCh17G001710Watermelon (Charleston Gray)cmawcgB319
CmaCh17G001710Watermelon (Charleston Gray)cmawcgB328
CmaCh17G001710Watermelon (97103) v1cmawmB333
CmaCh17G001710Watermelon (97103) v1cmawmB344
CmaCh17G001710Watermelon (97103) v1cmawmB358
CmaCh17G001710Cucurbita pepo (Zucchini)cmacpeB411
CmaCh17G001710Silver-seed gourdcarcmaB1321