CmaCh17G000920 (gene) Cucurbita maxima (Rimu)

NameCmaCh17G000920
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu))
DescriptionUnknown protein
LocationCma_Chr17 : 460205 .. 461008 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACTTGGTTTGTGAAAGAGCAGGACATGACAAAGCTGGGGTGTCCAGTGGCACAACCCAAGTTTGAGTCTACCCTCGGCCAACACGATGATGCCGGAGTTGGTTTCGGGGAAGACCCACCTGTCGGTTTGAGGCTTGATGGTGATACGCTTCACACCAGGGTAGCTCTCAAGACCGAGCATGTCAATCTCATTGTCAAAGTGACCAATGTTGCAGACAATGGCATTGTTCTTCATCTTCCTCATGTGGTCAACCATGATGATATCCTTGTTACCGGTGGTGGTGACGAAGATATCAGCCTCAGAGACAACATCTTCTAAGGTGAGGACGGGAAGGCCTTCCATGAGAGCCTGGAGGGCACAAATTGGATCAATCTCGGTCACGATAACACGAGCGCCAGCTTGCTTGAGAGCAGAAGCACAGCCCTTTCCAACATCTCCATAACCGCACACAACAGCAACCTTACCGGCAATCATGACATCAGTAGCTCTCATCAAACCATCAGGGAGAGAGTGTCGGCATCCATACAAGTTGTCGAACTGTAAACAATCGGAATTGAATCCGCTTAGAACCAGATTGGTGTTTAAAGCTAAAAATTGACAACAGAACGTTACAACGGTTCGATTGGCAGATGAAAGATACTTAATTATCAGTCAACAGCGGAAAACAGGGTAACTGAAATTGAATTCCATTAACAGCTTGTTTTAAACTCATGCAGGATTCAGAAGCAAGTACAAGCATGGATATGGATGATTCAAACACAACACAATACAAGCATGGATGAGCTTGGGTCACAGATCTGA

mRNA sequence

ATGACTTGGTTTGTGAAAGAGCAGGACATGACAAAGCTGGGGTGTCCAGTGGCACAACCCAAGTTTGAGTCTACCCTCGGCCAACACGATGATGCCGGAGTTGGTTTCGGGGAAGACCCACCTGTCGGTTTGAGGCTTGATGGTGATACGCTTCACACCAGGGTAGCTCTCAAGACCGAGCATGTCAATCTCATTGTCAAAGTGACCAATGTTGCAGACAATGGCATTGTTCTTCATCTTCCTCATGTGGTCAACCATGATGATATCCTTGTTACCGGTGGTGGTGAGGACGGGAAGGCCTTCCATGAGAGCCTGGAGGGCACAAATTGGATCAATCTCGGTCACGATAACACGAGCGCCAGCTTGCTTGAGAGCAGAAGCACAGCCCTTTCCAACATCTCCATAACCGCACACAACAGCAACCTTACCGGCAATCATGACATCAGTAGCTCTCATCAAACCATCAGGGAGAGAGTGTCGGCATCCATACAAGTTGTCGAACTGATTCAGAAGCAAGTACAAGCATGGATATGGATGATTCAAACACAACACAATACAAGCATGGATGAGCTTGGGTCACAGATCTGA

Coding sequence (CDS)

ATGACTTGGTTTGTGAAAGAGCAGGACATGACAAAGCTGGGGTGTCCAGTGGCACAACCCAAGTTTGAGTCTACCCTCGGCCAACACGATGATGCCGGAGTTGGTTTCGGGGAAGACCCACCTGTCGGTTTGAGGCTTGATGGTGATACGCTTCACACCAGGGTAGCTCTCAAGACCGAGCATGTCAATCTCATTGTCAAAGTGACCAATGTTGCAGACAATGGCATTGTTCTTCATCTTCCTCATGTGGTCAACCATGATGATATCCTTGTTACCGGTGGTGGTGAGGACGGGAAGGCCTTCCATGAGAGCCTGGAGGGCACAAATTGGATCAATCTCGGTCACGATAACACGAGCGCCAGCTTGCTTGAGAGCAGAAGCACAGCCCTTTCCAACATCTCCATAACCGCACACAACAGCAACCTTACCGGCAATCATGACATCAGTAGCTCTCATCAAACCATCAGGGAGAGAGTGTCGGCATCCATACAAGTTGTCGAACTGATTCAGAAGCAAGTACAAGCATGGATATGGATGATTCAAACACAACACAATACAAGCATGGATGAGCTTGGGTCACAGATCTGA

Protein sequence

MTWFVKEQDMTKLGCPVAQPKFESTLGQHDDAGVGFGEDPPVGLRLDGDTLHTRVALKTEHVNLIVKVTNVADNGIVLHLPHVVNHDDILVTGGGEDGKAFHESLEGTNWINLGHDNTSASLLESRSTALSNISITAHNSNLTGNHDISSSHQTIRERVSASIQVVELIQKQVQAWIWMIQTQHNTSMDELGSQI
BLAST of CmaCh17G000920 vs. TrEMBL
Match: A0A0P6IJC6_9CRUS (Uncharacterized protein (Fragment) OS=Daphnia magna PE=4 SV=1)

HSP 1 Score: 100.5 bits (249), Expect = 2.3e-18
Identity = 67/159 (42.14%), Postives = 89/159 (55.97%), Query Frame = 1

Query: 23  ESTLGQHDDAGVGFGEDPPVGLRLDGDTLHTRVALKTEHVNLIVKVTNVADNGIVLHLPH 82
           ++ LG+HD  GV   E   V L LD   L      +T HV+L+VKV NVADNG+VLHL H
Sbjct: 185 QTALGEHDH-GVAIREHKAVHLWLD--VLARGGLEQTGHVDLVVKVANVADNGVVLHLGH 244

Query: 83  VVNHDDILVTGGGE-------------DGKAFHESLEGTNWINLGHDNTSASLLESRSTA 142
           V  HD++LVTG G+             D +A H  LE T+ INL H +     L     A
Sbjct: 245 VRGHDNVLVTGRGDEDISLVDHGLDAHDLEAVHARLERTDRINLRHVHDRTGGLHGLGRA 304

Query: 143 LSNISITAHNSNLTGNHDISSSHQTIRERVSASIQVVEL 169
           L++I+    +  L   HD+  +H  IRERV+A++QVVEL
Sbjct: 305 LADITEATDHDALASKHDVGGTHDAIRERVAAAVQVVEL 340

BLAST of CmaCh17G000920 vs. TrEMBL
Match: A0A0P6GLJ7_9CRUS (Uncharacterized protein (Fragment) OS=Daphnia magna PE=4 SV=1)

HSP 1 Score: 100.5 bits (249), Expect = 2.3e-18
Identity = 67/159 (42.14%), Postives = 89/159 (55.97%), Query Frame = 1

Query: 23  ESTLGQHDDAGVGFGEDPPVGLRLDGDTLHTRVALKTEHVNLIVKVTNVADNGIVLHLPH 82
           ++ LG+HD  GV   E   V L LD   L      +T HV+L+VKV NVADNG+VLHL H
Sbjct: 168 QTALGEHDH-GVAIREHKAVHLWLD--VLARGGLEQTGHVDLVVKVANVADNGVVLHLGH 227

Query: 83  VVNHDDILVTGGGE-------------DGKAFHESLEGTNWINLGHDNTSASLLESRSTA 142
           V  HD++LVTG G+             D +A H  LE T+ INL H +     L     A
Sbjct: 228 VRGHDNVLVTGRGDEDISLVDHGLDAHDLEAVHARLERTDRINLRHVHDRTGGLHGLGRA 287

Query: 143 LSNISITAHNSNLTGNHDISSSHQTIRERVSASIQVVEL 169
           L++I+    +  L   HD+  +H  IRERV+A++QVVEL
Sbjct: 288 LADITEATDHDALASKHDVGGTHDAIRERVAAAVQVVEL 323

BLAST of CmaCh17G000920 vs. TrEMBL
Match: A0A0A1DPG8_NOCSI (Signal peptidase I OS=Nocardioides simplex GN=KR76_19725 PE=4 SV=2)

HSP 1 Score: 83.2 bits (204), Expect = 3.9e-13
Identity = 53/159 (33.33%), Postives = 89/159 (55.97%), Query Frame = 1

Query: 23  ESTLGQHDDAGVGFGEDPPVGLRLDGDTLHTRVALKTEHVNLIVKVTNVADNGIVLHLPH 82
           ++ LG+ DD  +  GEDP V L LD      R   +  HV+L+V+V +VAD+G+VLHL  
Sbjct: 86  QTALGEDDDL-LAVGEDPLVDLGLDLVLDDARDLREAGHVDLVVEVADVADDGLVLHLLE 145

Query: 83  VVNHDDILVTGGGE-------------DGKAFHESLEGTNWINLGHDNTSASLLESRSTA 142
           V++ DD++V G G+             D  A H  L+  + ++LG D+      +    A
Sbjct: 146 VLDLDDVVVAGRGDEDVGVLDDGLEALDLVAVHRGLQRADRVDLGDDDARTLAAQRLRGA 205

Query: 143 LSNISITAHNSNLTGNHDISSSHQTIRERVSASIQVVEL 169
           L+++++ A + +L  +HD+  +   + ERV+A++ VVEL
Sbjct: 206 LAHVAVAADDRDLAADHDVGGAVDAVDERVAAAVLVVEL 243

BLAST of CmaCh17G000920 vs. TrEMBL
Match: R5X3B0_9BACT (Uncharacterized protein OS=Alistipes sp. CAG:157 GN=BN505_00296 PE=4 SV=1)

HSP 1 Score: 82.4 bits (202), Expect = 6.6e-13
Identity = 50/139 (35.97%), Postives = 75/139 (53.96%), Query Frame = 1

Query: 42  VGLRLDGDTLHTRVALKTEHVNLIVKVTNVADNGIVLHLPHVVNHDDILVTGGGEDGKAF 101
           V LR D    H  V ++  H+ L+V+V ++A +G+V H  HV   DDI V G G +  A 
Sbjct: 9   VHLRFDDALGHRPVTVEPRHLYLVVEVADIAHDGLVAHAVHVFEGDDIAVAGTGHEDVAL 68

Query: 102 -------------HESLEGTNWINLGHDNTSASLLESRSTALSNISITAHNSNLTGNHDI 161
                        H  L+G   + LGHD   A    +R T L++I++TAH+ +L GNH +
Sbjct: 69  RERLLDSLHLISLHGRLQGAYRVYLGHDYPCAVGTHARGTPLAHIAVTAHDDHLAGNHHV 128

Query: 162 SSSHQTIRERVSASIQVVE 168
            S    I +R++A++QVVE
Sbjct: 129 RSPLDAIGQRLAAAVQVVE 147

BLAST of CmaCh17G000920 vs. TrEMBL
Match: A0A0S4JF37_BODSA (Uncharacterized protein OS=Bodo saltans GN=BSAL_24550c PE=4 SV=1)

HSP 1 Score: 80.1 bits (196), Expect = 3.3e-12
Identity = 52/159 (32.70%), Postives = 83/159 (52.20%), Query Frame = 1

Query: 23  ESTLGQHDDAGVGFGEDPPVGLRLDGDTLHTRVALKTEHVNLIVKVTNVADNGIVLHLPH 82
           E+ LG+ DD   G G    V L LD   +   V L+   ++L V+V NVAD+G+V H   
Sbjct: 98  EAALGEQDDVAAG-GHGVAVNLGLDL-AVGNGVGLQPADLDLSVEVANVADDGVVAHEGE 157

Query: 83  VVNHDDILVTGGGEDGK-------------AFHESLEGTNWINLGHDNTSASLLESRSTA 142
           V+  DD++VTGGG +               A H  L+G + ++LG  N      E    +
Sbjct: 158 VLGGDDVVVTGGGHEDVGISNGVLNAEHLVALHARLQGVDGVDLGDHNAGTEGAECSGAS 217

Query: 143 LSNISITAHNSNLTGNHDISSSHQTIRERVSASIQVVEL 169
           L++I++   +  L GNH +S +   + + ++A++QVVEL
Sbjct: 218 LTHITVAGDDRGLAGNHHVSGALDAVHKGLAAAVQVVEL 254

BLAST of CmaCh17G000920 vs. NCBI nr
Match: gi|763871098|gb|AIY18433.2| (Signal peptidase I [Pimelobacter simplex])

HSP 1 Score: 83.2 bits (204), Expect = 5.6e-13
Identity = 53/159 (33.33%), Postives = 89/159 (55.97%), Query Frame = 1

Query: 23  ESTLGQHDDAGVGFGEDPPVGLRLDGDTLHTRVALKTEHVNLIVKVTNVADNGIVLHLPH 82
           ++ LG+ DD  +  GEDP V L LD      R   +  HV+L+V+V +VAD+G+VLHL  
Sbjct: 86  QTALGEDDDL-LAVGEDPLVDLGLDLVLDDARDLREAGHVDLVVEVADVADDGLVLHLLE 145

Query: 83  VVNHDDILVTGGGE-------------DGKAFHESLEGTNWINLGHDNTSASLLESRSTA 142
           V++ DD++V G G+             D  A H  L+  + ++LG D+      +    A
Sbjct: 146 VLDLDDVVVAGRGDEDVGVLDDGLEALDLVAVHRGLQRADRVDLGDDDARTLAAQRLRGA 205

Query: 143 LSNISITAHNSNLTGNHDISSSHQTIRERVSASIQVVEL 169
           L+++++ A + +L  +HD+  +   + ERV+A++ VVEL
Sbjct: 206 LAHVAVAADDRDLAADHDVGGAVDAVDERVAAAVLVVEL 243

BLAST of CmaCh17G000920 vs. NCBI nr
Match: gi|524232955|emb|CCZ99012.1| (putative uncharacterized protein PY07799 [Alistipes sp. CAG:157])

HSP 1 Score: 82.4 bits (202), Expect = 9.5e-13
Identity = 50/139 (35.97%), Postives = 75/139 (53.96%), Query Frame = 1

Query: 42  VGLRLDGDTLHTRVALKTEHVNLIVKVTNVADNGIVLHLPHVVNHDDILVTGGGEDGKAF 101
           V LR D    H  V ++  H+ L+V+V ++A +G+V H  HV   DDI V G G +  A 
Sbjct: 9   VHLRFDDALGHRPVTVEPRHLYLVVEVADIAHDGLVAHAVHVFEGDDIAVAGTGHEDVAL 68

Query: 102 -------------HESLEGTNWINLGHDNTSASLLESRSTALSNISITAHNSNLTGNHDI 161
                        H  L+G   + LGHD   A    +R T L++I++TAH+ +L GNH +
Sbjct: 69  RERLLDSLHLISLHGRLQGAYRVYLGHDYPCAVGTHARGTPLAHIAVTAHDDHLAGNHHV 128

Query: 162 SSSHQTIRERVSASIQVVE 168
            S    I +R++A++QVVE
Sbjct: 129 RSPLDAIGQRLAAAVQVVE 147

BLAST of CmaCh17G000920 vs. NCBI nr
Match: gi|972133249|gb|KUI61723.1| (hypothetical protein VP1G_11265 [Valsa mali var. pyri])

HSP 1 Score: 80.5 bits (197), Expect = 3.6e-12
Identity = 55/160 (34.38%), Postives = 91/160 (56.88%), Query Frame = 1

Query: 23  ESTLGQHDDAGVGFGEDPPVGLRLDG-DTLHTRVALKTEHVNLIVKVTNVADNGIVLHLP 82
           ++TL + DD      E+  V L LD  D L   V L+  +V+L VKV NVADNG+V HL 
Sbjct: 90  QTTLSEEDDVAAAVHEEA-VDLGLDVLDALG--VGLEPGNVDLNVKVANVADNGVVGHLL 149

Query: 83  HVVNHDDILVTGGGE-------------DGKAFHESLEGTNWINLGHDNTSASLLESRST 142
            V  ++D+   GGG+             D  A H  LEG + ++L +++T    ++    
Sbjct: 150 EVPANEDVTAAGGGDKDLAKAGSLVHGDDLVASHGGLEGVDGVDLSNEDTGTHAVKGLGA 209

Query: 143 ALSNISITAHNSNLTGNHDISSSHQTIRERVSASIQVVEL 169
            L++I+ T+++S+L  NHD+  +  T+ ER++A+++VV+L
Sbjct: 210 TLTDITETSNDSDLASNHDVGGTLDTVNERLTAAVKVVKL 246

BLAST of CmaCh17G000920 vs. NCBI nr
Match: gi|955166772|emb|CUG90010.1| (unnamed protein product [Bodo saltans])

HSP 1 Score: 80.1 bits (196), Expect = 4.7e-12
Identity = 52/159 (32.70%), Postives = 83/159 (52.20%), Query Frame = 1

Query: 23  ESTLGQHDDAGVGFGEDPPVGLRLDGDTLHTRVALKTEHVNLIVKVTNVADNGIVLHLPH 82
           E+ LG+ DD   G G    V L LD   +   V L+   ++L V+V NVAD+G+V H   
Sbjct: 98  EAALGEQDDVAAG-GHGVAVNLGLDL-AVGNGVGLQPADLDLSVEVANVADDGVVAHEGE 157

Query: 83  VVNHDDILVTGGGEDGK-------------AFHESLEGTNWINLGHDNTSASLLESRSTA 142
           V+  DD++VTGGG +               A H  L+G + ++LG  N      E    +
Sbjct: 158 VLGGDDVVVTGGGHEDVGISNGVLNAEHLVALHARLQGVDGVDLGDHNAGTEGAECSGAS 217

Query: 143 LSNISITAHNSNLTGNHDISSSHQTIRERVSASIQVVEL 169
           L++I++   +  L GNH +S +   + + ++A++QVVEL
Sbjct: 218 LTHITVAGDDRGLAGNHHVSGALDAVHKGLAAAVQVVEL 254

BLAST of CmaCh17G000920 vs. NCBI nr
Match: gi|82914026|ref|XP_728767.1| (hypothetical protein, partial [Plasmodium yoelii yoelii 17XNL])

HSP 1 Score: 75.5 bits (184), Expect = 1.2e-10
Identity = 55/165 (33.33%), Postives = 84/165 (50.91%), Query Frame = 1

Query: 17  VAQPKFESTLGQHDDAGVGFGEDPPVGLRLDGDTLHTRVALKTEHVNLIVKVTNVADNGI 76
           V QP F     Q DDA    GED  V L LD   +   V       +  V+V +VAD+G+
Sbjct: 208 VHQPAFR----QQDDAAT-VGEDDVVHLGLD---VLPGVLPHRGDFDFRVEVADVADDGL 267

Query: 77  VLHLPHVVNHDDILVTGGGED-------------GKAFHESLEGTNWINLGHDNTSASLL 136
           VLHL HVV  DD  V GGG++               AFH  L+G + I+LG  +  A   
Sbjct: 268 VLHLHHVVVGDDAHVAGGGDEDVGLVAGLVHGHYAVAFHGGLQGADGIDLGDPHGGAEAA 327

Query: 137 ESRSTALSNISITAHNSNLTGNHDISSSHQTIRERVSASIQVVEL 169
           +    AL+++++  H+ +L G+H +  +   + +  +A+++VVEL
Sbjct: 328 QGLGAALAHVAVAQHHGDLAGDHHVGGALDAVHQGFAAAVEVVEL 364

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0P6IJC6_9CRUS2.3e-1842.14Uncharacterized protein (Fragment) OS=Daphnia magna PE=4 SV=1[more]
A0A0P6GLJ7_9CRUS2.3e-1842.14Uncharacterized protein (Fragment) OS=Daphnia magna PE=4 SV=1[more]
A0A0A1DPG8_NOCSI3.9e-1333.33Signal peptidase I OS=Nocardioides simplex GN=KR76_19725 PE=4 SV=2[more]
R5X3B0_9BACT6.6e-1335.97Uncharacterized protein OS=Alistipes sp. CAG:157 GN=BN505_00296 PE=4 SV=1[more]
A0A0S4JF37_BODSA3.3e-1232.70Uncharacterized protein OS=Bodo saltans GN=BSAL_24550c PE=4 SV=1[more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
gi|763871098|gb|AIY18433.2|5.6e-1333.33Signal peptidase I [Pimelobacter simplex][more]
gi|524232955|emb|CCZ99012.1|9.5e-1335.97putative uncharacterized protein PY07799 [Alistipes sp. CAG:157][more]
gi|972133249|gb|KUI61723.1|3.6e-1234.38hypothetical protein VP1G_11265 [Valsa mali var. pyri][more]
gi|955166772|emb|CUG90010.1|4.7e-1232.70unnamed protein product [Bodo saltans][more]
gi|82914026|ref|XP_728767.1|1.2e-1033.33hypothetical protein, partial [Plasmodium yoelii yoelii 17XNL][more]
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh17G000920.1CmaCh17G000920.1mRNA


The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CmaCh17G000920Wild cucumber (PI 183967)cmacpiB355
CmaCh17G000920Wild cucumber (PI 183967)cmacpiB358
CmaCh17G000920Cucumber (Chinese Long) v2cmacuB354
CmaCh17G000920Melon (DHL92) v3.5.1cmameB338
CmaCh17G000920Melon (DHL92) v3.5.1cmameB343
CmaCh17G000920Watermelon (Charleston Gray)cmawcgB319
CmaCh17G000920Watermelon (Charleston Gray)cmawcgB328
CmaCh17G000920Watermelon (97103) v1cmawmB344
CmaCh17G000920Watermelon (97103) v1cmawmB358
CmaCh17G000920Cucurbita pepo (Zucchini)cmacpeB371
CmaCh17G000920Cucurbita pepo (Zucchini)cmacpeB402
CmaCh17G000920Cucurbita pepo (Zucchini)cmacpeB411
CmaCh17G000920Bottle gourd (USVL1VR-Ls)cmalsiB331
CmaCh17G000920Bottle gourd (USVL1VR-Ls)cmalsiB356
CmaCh17G000920Cucumber (Gy14) v2cgybcmaB194
CmaCh17G000920Cucumber (Gy14) v2cgybcmaB197
CmaCh17G000920Cucumber (Gy14) v2cgybcmaB345
CmaCh17G000920Melon (DHL92) v3.6.1cmamedB394
CmaCh17G000920Melon (DHL92) v3.6.1cmamedB398
CmaCh17G000920Silver-seed gourdcarcmaB0314
CmaCh17G000920Silver-seed gourdcarcmaB1321
CmaCh17G000920Cucumber (Chinese Long) v3cmacucB0424
CmaCh17G000920Cucumber (Chinese Long) v3cmacucB0425
CmaCh17G000920Watermelon (97103) v2cmawmbB366
CmaCh17G000920Watermelon (97103) v2cmawmbB377
CmaCh17G000920Wax gourdcmawgoB0455
CmaCh17G000920Wax gourdcmawgoB0475
CmaCh17G000920Cucurbita maxima (Rimu)cmacmaB249
CmaCh17G000920Cucurbita maxima (Rimu)cmacmaB373
CmaCh17G000920Cucumber (Gy14) v1cgycmaB0565
CmaCh17G000920Cucumber (Gy14) v1cgycmaB0715
CmaCh17G000920Cucumber (Gy14) v1cgycmaB0743
CmaCh17G000920Cucurbita moschata (Rifu)cmacmoB350
CmaCh17G000920Cucurbita moschata (Rifu)cmacmoB353
CmaCh17G000920Cucurbita moschata (Rifu)cmacmoB362
CmaCh17G000920Cucurbita moschata (Rifu)cmacmoB365