CmaCh17G000920 (gene) Cucurbita maxima (Rimu)
The following sequences are available for this feature:
Legend: CDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGACTTGGTTTGTGAAAGAGCAGGACATGACAAAGCTGGGGTGTCCAGTGGCACAACCCAAGTTTGAGTCTACCCTCGGCCAACACGATGATGCCGGAGTTGGTTTCGGGGAAGACCCACCTGTCGGTTTGAGGCTTGATGGTGATACGCTTCACACCAGGGTAGCTCTCAAGACCGAGCATGTCAATCTCATTGTCAAAGTGACCAATGTTGCAGACAATGGCATTGTTCTTCATCTTCCTCATGTGGTCAACCATGATGATATCCTTGTTACCGGTGGTGGTGACGAAGATATCAGCCTCAGAGACAACATCTTCTAAGGTGAGGACGGGAAGGCCTTCCATGAGAGCCTGGAGGGCACAAATTGGATCAATCTCGGTCACGATAACACGAGCGCCAGCTTGCTTGAGAGCAGAAGCACAGCCCTTTCCAACATCTCCATAACCGCACACAACAGCAACCTTACCGGCAATCATGACATCAGTAGCTCTCATCAAACCATCAGGGAGAGAGTGTCGGCATCCATACAAGTTGTCGAACTGTAAACAATCGGAATTGAATCCGCTTAGAACCAGATTGGTGTTTAAAGCTAAAAATTGACAACAGAACGTTACAACGGTTCGATTGGCAGATGAAAGATACTTAATTATCAGTCAACAGCGGAAAACAGGGTAACTGAAATTGAATTCCATTAACAGCTTGTTTTAAACTCATGCAGGATTCAGAAGCAAGTACAAGCATGGATATGGATGATTCAAACACAACACAATACAAGCATGGATGAGCTTGGGTCACAGATCTGA ATGACTTGGTTTGTGAAAGAGCAGGACATGACAAAGCTGGGGTGTCCAGTGGCACAACCCAAGTTTGAGTCTACCCTCGGCCAACACGATGATGCCGGAGTTGGTTTCGGGGAAGACCCACCTGTCGGTTTGAGGCTTGATGGTGATACGCTTCACACCAGGGTAGCTCTCAAGACCGAGCATGTCAATCTCATTGTCAAAGTGACCAATGTTGCAGACAATGGCATTGTTCTTCATCTTCCTCATGTGGTCAACCATGATGATATCCTTGTTACCGGTGGTGGTGAGGACGGGAAGGCCTTCCATGAGAGCCTGGAGGGCACAAATTGGATCAATCTCGGTCACGATAACACGAGCGCCAGCTTGCTTGAGAGCAGAAGCACAGCCCTTTCCAACATCTCCATAACCGCACACAACAGCAACCTTACCGGCAATCATGACATCAGTAGCTCTCATCAAACCATCAGGGAGAGAGTGTCGGCATCCATACAAGTTGTCGAACTGATTCAGAAGCAAGTACAAGCATGGATATGGATGATTCAAACACAACACAATACAAGCATGGATGAGCTTGGGTCACAGATCTGA ATGACTTGGTTTGTGAAAGAGCAGGACATGACAAAGCTGGGGTGTCCAGTGGCACAACCCAAGTTTGAGTCTACCCTCGGCCAACACGATGATGCCGGAGTTGGTTTCGGGGAAGACCCACCTGTCGGTTTGAGGCTTGATGGTGATACGCTTCACACCAGGGTAGCTCTCAAGACCGAGCATGTCAATCTCATTGTCAAAGTGACCAATGTTGCAGACAATGGCATTGTTCTTCATCTTCCTCATGTGGTCAACCATGATGATATCCTTGTTACCGGTGGTGGTGAGGACGGGAAGGCCTTCCATGAGAGCCTGGAGGGCACAAATTGGATCAATCTCGGTCACGATAACACGAGCGCCAGCTTGCTTGAGAGCAGAAGCACAGCCCTTTCCAACATCTCCATAACCGCACACAACAGCAACCTTACCGGCAATCATGACATCAGTAGCTCTCATCAAACCATCAGGGAGAGAGTGTCGGCATCCATACAAGTTGTCGAACTGATTCAGAAGCAAGTACAAGCATGGATATGGATGATTCAAACACAACACAATACAAGCATGGATGAGCTTGGGTCACAGATCTGA MTWFVKEQDMTKLGCPVAQPKFESTLGQHDDAGVGFGEDPPVGLRLDGDTLHTRVALKTEHVNLIVKVTNVADNGIVLHLPHVVNHDDILVTGGGEDGKAFHESLEGTNWINLGHDNTSASLLESRSTALSNISITAHNSNLTGNHDISSSHQTIRERVSASIQVVELIQKQVQAWIWMIQTQHNTSMDELGSQI
BLAST of CmaCh17G000920 vs. TrEMBL
Match: A0A0P6IJC6_9CRUS (Uncharacterized protein (Fragment) OS=Daphnia magna PE=4 SV=1) HSP 1 Score: 100.5 bits (249), Expect = 2.3e-18 Identity = 67/159 (42.14%), Postives = 89/159 (55.97%), Query Frame = 1
BLAST of CmaCh17G000920 vs. TrEMBL
Match: A0A0P6GLJ7_9CRUS (Uncharacterized protein (Fragment) OS=Daphnia magna PE=4 SV=1) HSP 1 Score: 100.5 bits (249), Expect = 2.3e-18 Identity = 67/159 (42.14%), Postives = 89/159 (55.97%), Query Frame = 1
BLAST of CmaCh17G000920 vs. TrEMBL
Match: A0A0A1DPG8_NOCSI (Signal peptidase I OS=Nocardioides simplex GN=KR76_19725 PE=4 SV=2) HSP 1 Score: 83.2 bits (204), Expect = 3.9e-13 Identity = 53/159 (33.33%), Postives = 89/159 (55.97%), Query Frame = 1
BLAST of CmaCh17G000920 vs. TrEMBL
Match: R5X3B0_9BACT (Uncharacterized protein OS=Alistipes sp. CAG:157 GN=BN505_00296 PE=4 SV=1) HSP 1 Score: 82.4 bits (202), Expect = 6.6e-13 Identity = 50/139 (35.97%), Postives = 75/139 (53.96%), Query Frame = 1
BLAST of CmaCh17G000920 vs. TrEMBL
Match: A0A0S4JF37_BODSA (Uncharacterized protein OS=Bodo saltans GN=BSAL_24550c PE=4 SV=1) HSP 1 Score: 80.1 bits (196), Expect = 3.3e-12 Identity = 52/159 (32.70%), Postives = 83/159 (52.20%), Query Frame = 1
BLAST of CmaCh17G000920 vs. NCBI nr
Match: gi|763871098|gb|AIY18433.2| (Signal peptidase I [Pimelobacter simplex]) HSP 1 Score: 83.2 bits (204), Expect = 5.6e-13 Identity = 53/159 (33.33%), Postives = 89/159 (55.97%), Query Frame = 1
BLAST of CmaCh17G000920 vs. NCBI nr
Match: gi|524232955|emb|CCZ99012.1| (putative uncharacterized protein PY07799 [Alistipes sp. CAG:157]) HSP 1 Score: 82.4 bits (202), Expect = 9.5e-13 Identity = 50/139 (35.97%), Postives = 75/139 (53.96%), Query Frame = 1
BLAST of CmaCh17G000920 vs. NCBI nr
Match: gi|972133249|gb|KUI61723.1| (hypothetical protein VP1G_11265 [Valsa mali var. pyri]) HSP 1 Score: 80.5 bits (197), Expect = 3.6e-12 Identity = 55/160 (34.38%), Postives = 91/160 (56.88%), Query Frame = 1
BLAST of CmaCh17G000920 vs. NCBI nr
Match: gi|955166772|emb|CUG90010.1| (unnamed protein product [Bodo saltans]) HSP 1 Score: 80.1 bits (196), Expect = 4.7e-12 Identity = 52/159 (32.70%), Postives = 83/159 (52.20%), Query Frame = 1
BLAST of CmaCh17G000920 vs. NCBI nr
Match: gi|82914026|ref|XP_728767.1| (hypothetical protein, partial [Plasmodium yoelii yoelii 17XNL]) HSP 1 Score: 75.5 bits (184), Expect = 1.2e-10 Identity = 55/165 (33.33%), Postives = 84/165 (50.91%), Query Frame = 1
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |