CmaCh17G000310 (gene) Cucurbita maxima (Rimu)
The following sequences are available for this feature:
Legend: CDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAGGGTGTTGTACCATTGGGAAGATTATACCTGATTTCCAAGACATTAACTCAGCAAGCAGCTATTGAGTTCTCTCAGCAATATGGATTGGAAGTTGTCGCTGTCCTTCCATCTTATTTTGTCGGTCCCTTCATTTGTCCTAAGCTTCCTGACTCTGTTCTTATGACAATGCCTCTGATGTTATATATTTCTTTTCATGTTTAAAGTATCTTATGCTTGTAGACTTGGAATTCTTTGTTGAAGAGTTGGCAGATACCTAACTTTTCCTGAAACTTTTGGCTAGAGAAATAGTTCACTTCATCTTTTTTAAATTATAAGTTGTTTTCGAACTTCTTTTGAGGATCGTATCCTTTTTAAATCCTCAAACTTGTTACAAATTTCAATTACATAACGTTTGAATTATGTCTCAGAACATTAGATTATGTTAATGTTTCGTGAAAGTCTTTAATACCAATGCCCATTTGGTTGTTTGATGTTTGAATATTCATTCACTTACTAAATCTTAAACATGGGAGCATCATATTGTGTTTGTGAGTTGGTTATTTATTTGAAATGGAGAGATTGAACAAACACAACTGGTTTGGTTTGACTATAGGTCTTCGAAAGATATTAAAAGCTACATATTCAGTAACGTCGCATCCACGAAGCTTTTGGGTGCTAGTTTTCCATACAAGTATTGTATTGAAGAAATGTTTGATGGAGCAATCGAAAGCTACAAAGAGAAAGGGTACCTGTATGAACGAAGGAGTAGTAAACATAGAAACATAATTAATAAAATCTCATAATTGATTTCTTAGCTAATTGATGTTAGAGATACCGTTTCAAGACGTTGTATGTGAGATTTCAAATCGGGTGGAGAGCGGAATGAAGTATTCCTTATAAGAGTGTGGAAACCTCTTCCTAATATACGCGTTTTAAAATCATGAGGCTGACAGCGATACGTAACGGGTCATTCCGAACAATATCTACTACCGGTGACTCTGTTACATTGTCTAATCTTTTGAAAGTAATAAATCTTTTAAGATGGGGATAGGGAGTTCTTTTGTCTTCGAGTTGGATTTCCTTTTACATCTTCTCCAAAAAAATTTCATTAACTATTGTAAATTTCTGTAATAAAACCAATTATTTTAGTTGTATTATCACTCGCTTGAATCCTTCTATATAGCTTTAATATCCATTTGGAAAAATGAGAAAACGATGGGAGAAAGAGAAAATGGAGTTGAGCAGAGAAAAAACATAGCCTCCACATGATATCTGATAAATGAAAACCTTCCCATCTTGTGGGACATCATTTTTAAGATTGCATGTCCATTAGTCAGCTAGAAACCTTATCACAAATGTACGAGGTACACTAAAAAAGCCATAAATCTTAAACATTATCTCTTAGTTCTTCAAACTGTGTAGAGAGATGGAAGTTTGAGTAATAGAAGGCACTAGATTTACAGGTCGTGTCTTGTCAATCGACTTCTGGAAGGTAACCCAACTCAGGTATGTCTAAGATCACAGTCAAGAAGGAAGGACTCTTTAGTTTATCGTAATTCAAAAAGTACATCAAAAAAATTTAGAATGGAAAGATTTTTGGAGTCTGATCATATTTTGGATGTTTTCTCTTTTCCGGTGGTTGGAGAATTATTTGAATATTTTTTTATTTTAAGATTAGAATCTCAAAAAAGAAAATTTAG ATGAAGGGTGTTGTACCATTGGGAAGATTATACCTGATTTCCAAGACATTAACTCAGCAAGCAGCTATTGAGTTCTCTCAGCAATATGGATTGGAAGTTGTCGCTGTCCTTCCATCTTATTTTGTCGGTCCCTTCATTTGTCCTAAGCTTCCTGACTCTGTTCTTATGACAATGCCTCTGATGTCTTCGAAAGATATTAAAAGCTACATATTCAGTAACGTCGCATCCACGAAGCTTTTGGGTGCTAGTTTTCCATACAAGTATTGTATTGAAGAAATGTTTGATGGAGCAATCGAAAGCTACAAAGAGAAAGGGTACCTGTCGTGTCTTGTCAATCGACTTCTGGAAGGTAACCCAACTCAGATTAGAATCTCAAAAAAGAAAATTTAG ATGAAGGGTGTTGTACCATTGGGAAGATTATACCTGATTTCCAAGACATTAACTCAGCAAGCAGCTATTGAGTTCTCTCAGCAATATGGATTGGAAGTTGTCGCTGTCCTTCCATCTTATTTTGTCGGTCCCTTCATTTGTCCTAAGCTTCCTGACTCTGTTCTTATGACAATGCCTCTGATGTCTTCGAAAGATATTAAAAGCTACATATTCAGTAACGTCGCATCCACGAAGCTTTTGGGTGCTAGTTTTCCATACAAGTATTGTATTGAAGAAATGTTTGATGGAGCAATCGAAAGCTACAAAGAGAAAGGGTACCTGTCGTGTCTTGTCAATCGACTTCTGGAAGGTAACCCAACTCAGATTAGAATCTCAAAAAAGAAAATTTAG MKGVVPLGRLYLISKTLTQQAAIEFSQQYGLEVVAVLPSYFVGPFICPKLPDSVLMTMPLMSSKDIKSYIFSNVASTKLLGASFPYKYCIEEMFDGAIESYKEKGYLSCLVNRLLEGNPTQIRISKKKI
BLAST of CmaCh17G000310 vs. Swiss-Prot
Match: VESTR_MEDSA (Vestitone reductase OS=Medicago sativa PE=1 SV=1) HSP 1 Score: 61.2 bits (147), Expect = 9.4e-09 Identity = 27/64 (42.19%), Postives = 43/64 (67.19%), Query Frame = 1
BLAST of CmaCh17G000310 vs. Swiss-Prot
Match: DFRA_MAIZE (Dihydroflavonol-4-reductase OS=Zea mays GN=A1 PE=3 SV=1) HSP 1 Score: 52.0 bits (123), Expect = 5.7e-06 Identity = 20/55 (36.36%), Postives = 40/55 (72.73%), Query Frame = 1
BLAST of CmaCh17G000310 vs. TrEMBL
Match: A0A0D2Q924_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_009G045500 PE=4 SV=1) HSP 1 Score: 87.4 bits (215), Expect = 1.4e-14 Identity = 55/142 (38.73%), Postives = 72/142 (50.70%), Query Frame = 1
BLAST of CmaCh17G000310 vs. TrEMBL
Match: B9RDC9_RICCO (Cinnamoyl-CoA reductase, putative OS=Ricinus communis GN=RCOM_1612040 PE=3 SV=1) HSP 1 Score: 84.0 bits (206), Expect = 1.5e-13 Identity = 42/117 (35.90%), Postives = 71/117 (60.68%), Query Frame = 1
BLAST of CmaCh17G000310 vs. TrEMBL
Match: A0A0A0K9S9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G077400 PE=4 SV=1) HSP 1 Score: 83.2 bits (204), Expect = 2.6e-13 Identity = 39/61 (63.93%), Postives = 49/61 (80.33%), Query Frame = 1
BLAST of CmaCh17G000310 vs. TrEMBL
Match: M5X0D6_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa008527mg PE=4 SV=1) HSP 1 Score: 77.0 bits (188), Expect = 1.8e-11 Identity = 36/60 (60.00%), Postives = 47/60 (78.33%), Query Frame = 1
BLAST of CmaCh17G000310 vs. TrEMBL
Match: A0A022QZL7_ERYGU (Uncharacterized protein (Fragment) OS=Erythranthe guttata GN=MIMGU_mgv1a0110321mg PE=4 SV=1) HSP 1 Score: 72.0 bits (175), Expect = 5.9e-10 Identity = 46/130 (35.38%), Postives = 65/130 (50.00%), Query Frame = 1
BLAST of CmaCh17G000310 vs. TAIR10
Match: AT5G42800.1 (AT5G42800.1 dihydroflavonol 4-reductase) HSP 1 Score: 49.7 bits (117), Expect = 1.6e-06 Identity = 19/51 (37.25%), Postives = 37/51 (72.55%), Query Frame = 1
BLAST of CmaCh17G000310 vs. NCBI nr
Match: gi|763787711|gb|KJB54707.1| (hypothetical protein B456_009G045500 [Gossypium raimondii]) HSP 1 Score: 87.4 bits (215), Expect = 2.0e-14 Identity = 55/142 (38.73%), Postives = 72/142 (50.70%), Query Frame = 1
BLAST of CmaCh17G000310 vs. NCBI nr
Match: gi|1000981565|ref|XP_015583114.1| (PREDICTED: vestitone reductase [Ricinus communis]) HSP 1 Score: 84.0 bits (206), Expect = 2.2e-13 Identity = 42/117 (35.90%), Postives = 71/117 (60.68%), Query Frame = 1
BLAST of CmaCh17G000310 vs. NCBI nr
Match: gi|223548898|gb|EEF50387.1| (cinnamoyl-CoA reductase, putative [Ricinus communis]) HSP 1 Score: 84.0 bits (206), Expect = 2.2e-13 Identity = 42/117 (35.90%), Postives = 71/117 (60.68%), Query Frame = 1
BLAST of CmaCh17G000310 vs. NCBI nr
Match: gi|449454518|ref|XP_004145001.1| (PREDICTED: vestitone reductase-like [Cucumis sativus]) HSP 1 Score: 83.2 bits (204), Expect = 3.7e-13 Identity = 39/61 (63.93%), Postives = 49/61 (80.33%), Query Frame = 1
BLAST of CmaCh17G000310 vs. NCBI nr
Match: gi|659120303|ref|XP_008460121.1| (PREDICTED: vestitone reductase-like [Cucumis melo]) HSP 1 Score: 83.2 bits (204), Expect = 3.7e-13 Identity = 39/61 (63.93%), Postives = 49/61 (80.33%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |