CmaCh17G000170 (gene) Cucurbita maxima (Rimu)

NameCmaCh17G000170
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu))
DescriptionCOP9 signalosome complex subunit 1
LocationCma_Chr17 : 67751 .. 72768 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCATTTCTGCAGAAGCAAATCCGATGGCCACAGCGACAAACCGGAAGATAATTATGGTAACTTCGATAGCGATGAAGAAGAAAAGGGCTACTCTCCCACGCCGTTCTTGAAGGGGGGCAAGCATTTCGACATCCAAGCATACGCAAGCAACTACCACCGCAGTACCAAAATCCTCCGCCTCATATTCATCGCCGATCGCTTCGGCAACGCCAATGAAAGGCGGCGGAGTATGCAACTGGAGGCACTCCGAATCGCGTACGATATAGCCAAAAAGGGCAAGGACGTGAATGTGTTCATCAAAATCGTGCGAAAAATTGACGGGAGATTGGGCCCTAATTACGACATGGATGAAAATTGGTGCAACTCGGTGATTGAGGGGAGGCGTGTGATGAGCGAAATGCTACAGAGATGCGCGAAGAATTGTGAGGTATGAATTGAATCAGTAAATCAAATTCTGTAGTGATTATTGAATTATCTCGATATATATACACCTCATTGGTGGTTTTGTGATAGAAATCTTACACGGAAAGAACCATATGTGCGGAGGACGCAAGAAACGTGTTCAATTCGATAGCAGTTTTCTACGAGGACCACGGCGCTCTTACGAGGGCTTATGCGTTTTACAAGAAGAGCGTACATTTCTGCAGGAGCGATAAGAATTACTCAGAATTGCTAAGGCGTTTGATTGTGGTGGTGATTGAGTTGGGGCAGTTTGAAGCTTCTGCGGAGATTGCGGAAAAAGGAATGCAATATCCAAATCTTAATCCTATTACAATGGAGACTCTGCGCTGTGCTCTGGGATTGGCTCGCTTCAAGTCACATTGCTATAAAGACGCTGCTCATCAGGTTTGGCTTAGCCAATCCATCATCATTTCCATGTCAATAAATTCTTCCGTAACTCATATTCTTAGGAGTATACATGCAGCTCTTGGGAGTAAGTAAAGAATTGGGAAACCGATTTTCAAAAGTCATGGCTGCTCATGATATTGCTACCTTTGGCGCCCTATGTGCACTCGCAACTTTTGATCCAATAGAGTTCAAGGCACCAATTTTTCCATTTTTCTTTTCTAATTCTCCATTTACTTTGCACAGAATTTTATTTAGTCACTGGTTTTTTACATCCCCAGACTTCAGTTATGGATAATCAGAACTTTCATTTCTACTTGGATTCAGCTCTGGAAGTGAAGGAGCTCGTCAGGGATTTTTACTTGAGGTATCCTAGTGAACTTTGATTCATCTTTTCTCAACCAAACTTCACGTTCAGATTCTTAGTGTATGATGATCTATTGGCAGGCGTTATTGTTCGTGCTTCAGACACCTTGATAACTTGAGAGAATGGCTGTTGGCTGACATATATTTCTTCAATCACTACGAGACACTGTATAATAAAATCAGAAACAGAGCACTTATTGTCTACACCGAGCCCTTTGTGGCAGTTGGTTTGCAGAGAGTGGCTGTTGTTTTTGGTACAAACATTGAAGCTATTGAGAAGCAGCTCCTGGCTTTAATAAACACAAACCAAATTCAGGTCTTCGTAGCTCCCATTTTTCAAAGTTTGGTCATGTAATTCTTTACTAATAACCTCTCCTTTGTGTGTACTAGGCCGATGTTGACTCCATCAATAAAGTTGTACATTTCCCAAGACATGAAGGAAATGGAAGTTTCCCACAGGGTTTGCAGAGTAGTGTGGCTGAATTTGATCAGGTACATTCTGTTGTTAAACACATACTTTATTCGTAATGGAACTTGTATTATAGTATATCATAAACAAGAAACGCTATATGTTCTTTACTATACATCTGATGGGTAAGGCTGTTAATTCTTTTTCAACAAACGACTAAGACACAAACACAATATTGAAGGGTTGAGATAATAAGTATTCTACATTATCAAAAACAAGAGACTCATTGAGTACAAGTTGGGAGGTAGCGTTGTGGTTTAAGGTGGTAATAGGGTATGAAGGATGAAGGGAGAGGGGAATAGGGTAGGAGGAGGAGGAGGAGCAGCAGAGGGTGCGTGGATCCTCCATGTCTTTGGCCGCACCTATAAATGAGGCTGCCCTCCCTCCCTCCCTCCCAAACTCCATGCTGGCTGCTGGCTGGAATGTGTGGGGATCCACCTACACCCTACACCCCTACCGACCCCAAATTCATCCTCCACTGTTTTCTATTTATTTTCCGCTCATGTGGACCATTGCCATTCCATCTTCCCCCCCATTTAATTATAACTTCCTTACCCCATCCTTTAATAAATATTTTTCTTACTAATCATATATTTTTGTATTTGTATTTTGGGGGAATGATATGATATCCTCCATTTTATTTCACAAGAGCTGCCCGACTTATAGATTGAAAAGGGTTTTATGTCTTAATGAAAGTCATGCCATTGCCAACCCTCACCTCTCTTTTCTCCTCCTTCCTTCATTTTCAAGCTTTCTTAAAAGGCATGACATGAGATTAGTAGAAGAGTGTTTCCCTTTATCAATTGAGTTATGTTCATATTAACGTTTATTTTTTCTTTTTAGAAGAAATGATCGAGCCATAGTATTAGACAAAAACATGGGAATAAATGATCTCATTCACCATGTGCCTCTGTTTCACATTTCCATTTACATCTCTCTATAACCATTATTTTGTGTAAAAGAGAGAAGAATAATAATAGACCTTAAAAACTGTATATGCTTTGGATGTGCATTATTGAGTTTGTGATGAAGTTCCAATTTTTGACGCTACCTTCGCCCACTCAACTTCCTTCCTGCATCATGCATCATTCAAGGTGTGGGATACCCGACAATAACCATATATTTCATTTCTTCGTACATTTTATCTCATATTTAATAGATTTTAGACTAAATTGCTAGAATATTGATGTCTCGTTACCTTTGGTCATCTTGATCTATAAATATTTGTATTTTCGTGTGATAGTCATTAATTTATATAATCACTAACTAACTATATAAATTTTCAAGTCTTTGATTTAATTACATATTGATGGAACTATAATGGTAATAAACGTTACATTTTTTAGATTAAAAAAATTTGAAAGTGGGAGATTTTTTTTTTACTACGTTTGTAATTATTTTTAAGTTGCTATTTTTATGTAATATAATAATTCATTTACGTTATATTAGAAATTTGGTTTTAAAGCTTAAAACATACGAAACTAATAAAATACTTGGGCTTTAATTTTAGTTTAGTCAATATGGTTGAGACAATAAATATAATGAGAAGAATTTAAAGTAATAGTATGGGGTGGTAAATGATAGTAAAAAGATAAAAAGTTGAATTTAATTACCTCATAATGAGGTATATTAAAGCAGCACTTTCTTTTTTCTTAAAGTGGAAAAGATTATATTTAAATTAATTGCCCCAAATTAAACAAATATTTATAGTGCCATTTATTACTCACATTTAGCTTCATAACCATGTTATGTGCCTACTTTCACCTTTCTCTTTTTTTTTTGTTTTCTAATTTGTTCTTAAAATTAGCTTTCCAACTTATAATAATCCAAACTTCAAACCTACAACTAATAAATCTAGAGTTACTAAACCCAACCAGCCTTCGATACACTTGAGACATGACGAAACTACCCTTTGGAGTAGGATTGAGTATGCTTGCATTGCAAACCAAAAACACTAAATGAAAAAGAAAAAAAAAATGAAAGGGGAAAGGAAGAAGGGTGCAAAAAATTAATAGGAGAGAGAGAATGGGGAATTGGGGAAAGGCATGAATGAATGCATAAGGTTACCAAAGGCCCTATACTCTCTCTATGCATAGACTAAAGTGAGAAGCAAGCCAAAGAAAACAACATTTTGTATGACTCATAAAAGGCCACCATAACTCAACTCCTTCCCCCTTCTACCTAATTTTTGTGGTCCTGTCTCTAACACAAAGGGCTTAGGGTTCACCCAAGATTTGGTTTAACAAGTTCTTTAGCATTTATAAAAACTTTGTCAATTTGTTAAATAATGTCATTTTTGTGAAAAATATCCCATCATCCTATTACTCAATCTCTCTCTAATCATTCTCTGTCTTTCTTTTCTCTCGTGGTTTACAAATTAATTTTTTAAAATAATCATAACAAAAATCTAAAATATGATATTACACACTCACAAATTCATTAATAACTAATAATGGCATGTATGAAGCTTTGTAATATATTATCAAAACATTTTTAAAGAACAGGTTAAATTATAATAATTTTAAAAAATGAAATTGAGTATATATTGAATTCCAAAATTTGTGAAAGAGTTGCATAATTTAGGGAAGAGATTGGTACAAAAATTTGGAGTTTCCGAAGTCAGAGACCCATAGAAGGGAATAGGTTATTTATTTAAGCTTCTTCTTCTTCTTCCTCTTCTTCCTCTTCTTCCTCACCACTGTAACTGTAAGTGTATGATGCCATTTTCAGAGGGTTTGGGAACGGGCGATTGAGAGTCAACCGCACCCCCTTTTACCCTTTTGTTGTACCTTCGTATTTCTAAGGCTTCCAATACTCCACATATTGCGTTTTATCCTCTCTCTCCCCTTCTTCTCTCTGCACAAATCTTTAAAATAACAATACAAAACGTCCATTCTTCCATTTCTCTTTCTCTCTCTCTCTCTCCTCTTTTTTCTTTTTTCTTTTTTCGATTCTCCAAGTTTTCTGCTGCCTTGAAAGGGGTTCTTCTTCTTTTTTTTTTTAAAAACATGCAGCGAGGCTCAAGTAGCCCCCATTAACTAGGGTTCTTCAGCTTCTTCTTTTCTGGAGAGAGAGAGAGAGAGAGAGCGAGAGAGAGAAAGTGAGGGAGGGAGGGAGGGAGGAAGAAATAGCACAAGGGGTTTTTCCATTTCACTCTCTCTCTCTTCTTCTTATTGCTTTTTGGTTTTGGGGGTTTTGTGGGTCTTGTGGGTCTGTTATTTCTTCTGGGTTTCTGTGGAACGCCTTCATTTCATTGATTTCTCTAGCAATGGGCTAAGTTCTTCGTTAATTTTGTAAGCACCCCAAAAACATTAGCGAGTGGAAGAAATAAATAA

mRNA sequence

ATGCATTTCTGCAGAAGCAAATCCGATGGCCACAGCGACAAACCGGAAGATAATTATGGTAACTTCGATAGCGATGAAGAAGAAAAGGGCTACTCTCCCACGCCGTTCTTGAAGGGGGGCAAGCATTTCGACATCCAAGCATACGCAAGCAACTACCACCGCAGTACCAAAATCCTCCGCCTCATATTCATCGCCGATCGCTTCGGCAACGCCAATGAAAGGCGGCGGAGTATGCAACTGGAGGCACTCCGAATCGCGTACGATATAGCCAAAAAGGGCAAGGACGTGAATGTGTTCATCAAAATCGTGCGAAAAATTGACGGGAGATTGGGCCCTAATTACGACATGGATGAAAATTGGTGCAACTCGGTGATTGAGGGGAGGCGTGTGATGAGCGAAATGCTACAGAGATGCGCGAAGAATTGTGAGAAATCTTACACGGAAAGAACCATATGTGCGGAGGACGCAAGAAACGTGTTCAATTCGATAGCAGTTTTCTACGAGGACCACGGCGCTCTTACGAGGGCTTATGCGTTTTACAAGAAGAGCGTACATTTCTGCAGGAGCGATAAGAATTACTCAGAATTGCTAAGGCGTTTGATTGTGGTGGTGATTGAGTTGGGGCAGTTTGAAGCTTCTGCGGAGATTGCGGAAAAAGGAATGCAATATCCAAATCTTAATCCTATTACAATGGAGACTCTGCGCTGTGCTCTGGGATTGGCTCGCTTCAAGTCACATTGCTATAAAGACGCTGCTCATCAGACTTCAGTTATGGATAATCAGAACTTTCATTTCTACTTGGATTCAGCTCTGGAAGTGAAGGAGCTCGTCAGGGATTTTTACTTGAGGCGTTATTGTTCGTGCTTCAGACACCTTGATAACTTGAGAGAATGGCTGTTGGCTGACATATATTTCTTCAATCACTACGAGACACTGTATAATAAAATCAGAAACAGAGCACTTATTGTCTACACCGAGCCCTTTGTGGCAGTTGGTTTGCAGAGAGTGGCTGTTGTTTTTGGTACAAACATTGAAGCTATTGAGAAGCAGCTCCTGGCTTTAATAAACACAAACCAAATTCAGGCCGATGTTGACTCCATCAATAAAGTTGTACATTTCCCAAGACATGAAGGAAATGGAAGTTTCCCACAGGGTTTGCAGAGTAGTGTGGCTGAATTTGATCAGCAATGGGCTAAGTTCTTCGTTAATTTTGTAAGCACCCCAAAAACATTAGCGAGTGGAAGAAATAAATAA

Coding sequence (CDS)

ATGCATTTCTGCAGAAGCAAATCCGATGGCCACAGCGACAAACCGGAAGATAATTATGGTAACTTCGATAGCGATGAAGAAGAAAAGGGCTACTCTCCCACGCCGTTCTTGAAGGGGGGCAAGCATTTCGACATCCAAGCATACGCAAGCAACTACCACCGCAGTACCAAAATCCTCCGCCTCATATTCATCGCCGATCGCTTCGGCAACGCCAATGAAAGGCGGCGGAGTATGCAACTGGAGGCACTCCGAATCGCGTACGATATAGCCAAAAAGGGCAAGGACGTGAATGTGTTCATCAAAATCGTGCGAAAAATTGACGGGAGATTGGGCCCTAATTACGACATGGATGAAAATTGGTGCAACTCGGTGATTGAGGGGAGGCGTGTGATGAGCGAAATGCTACAGAGATGCGCGAAGAATTGTGAGAAATCTTACACGGAAAGAACCATATGTGCGGAGGACGCAAGAAACGTGTTCAATTCGATAGCAGTTTTCTACGAGGACCACGGCGCTCTTACGAGGGCTTATGCGTTTTACAAGAAGAGCGTACATTTCTGCAGGAGCGATAAGAATTACTCAGAATTGCTAAGGCGTTTGATTGTGGTGGTGATTGAGTTGGGGCAGTTTGAAGCTTCTGCGGAGATTGCGGAAAAAGGAATGCAATATCCAAATCTTAATCCTATTACAATGGAGACTCTGCGCTGTGCTCTGGGATTGGCTCGCTTCAAGTCACATTGCTATAAAGACGCTGCTCATCAGACTTCAGTTATGGATAATCAGAACTTTCATTTCTACTTGGATTCAGCTCTGGAAGTGAAGGAGCTCGTCAGGGATTTTTACTTGAGGCGTTATTGTTCGTGCTTCAGACACCTTGATAACTTGAGAGAATGGCTGTTGGCTGACATATATTTCTTCAATCACTACGAGACACTGTATAATAAAATCAGAAACAGAGCACTTATTGTCTACACCGAGCCCTTTGTGGCAGTTGGTTTGCAGAGAGTGGCTGTTGTTTTTGGTACAAACATTGAAGCTATTGAGAAGCAGCTCCTGGCTTTAATAAACACAAACCAAATTCAGGCCGATGTTGACTCCATCAATAAAGTTGTACATTTCCCAAGACATGAAGGAAATGGAAGTTTCCCACAGGGTTTGCAGAGTAGTGTGGCTGAATTTGATCAGCAATGGGCTAAGTTCTTCGTTAATTTTGTAAGCACCCCAAAAACATTAGCGAGTGGAAGAAATAAATAA

Protein sequence

MHFCRSKSDGHSDKPEDNYGNFDSDEEEKGYSPTPFLKGGKHFDIQAYASNYHRSTKILRLIFIADRFGNANERRRSMQLEALRIAYDIAKKGKDVNVFIKIVRKIDGRLGPNYDMDENWCNSVIEGRRVMSEMLQRCAKNCEKSYTERTICAEDARNVFNSIAVFYEDHGALTRAYAFYKKSVHFCRSDKNYSELLRRLIVVVIELGQFEASAEIAEKGMQYPNLNPITMETLRCALGLARFKSHCYKDAAHQTSVMDNQNFHFYLDSALEVKELVRDFYLRRYCSCFRHLDNLREWLLADIYFFNHYETLYNKIRNRALIVYTEPFVAVGLQRVAVVFGTNIEAIEKQLLALINTNQIQADVDSINKVVHFPRHEGNGSFPQGLQSSVAEFDQQWAKFFVNFVSTPKTLASGRNK
BLAST of CmaCh17G000170 vs. Swiss-Prot
Match: CSN1_XENLA (COP9 signalosome complex subunit 1 OS=Xenopus laevis GN=csn1 PE=2 SV=1)

HSP 1 Score: 127.5 bits (319), Expect = 3.4e-28
Identity = 102/413 (24.70%), Postives = 183/413 (44.31%), Query Frame = 1

Query: 23  DSDEEEKGYSPTPFLKGGKHFDIQAYASNYHRSTKILRLIFIADRFGNANERRRSMQLEA 82
           D  ++++      ++      D++ YAS+Y    +I RL FIADR          +++EA
Sbjct: 22  DPQDDQQNMPDVNYVVENPTLDLEQYASSYSGLMRIERLQFIADRCPQ-------LRVEA 81

Query: 83  LRIAYDIAKKGKDVNVFIKIVRKI---------------DGRLGPNYDMDENWCNSVIEG 142
           L++A    ++  +V+V+  I RK+               +G + P   +D +W  +  + 
Sbjct: 82  LKMALSFVQRTFNVDVYEDIHRKLAEASREVQNAPDAVPEGSMEPPA-LDTSWVEATRKK 141

Query: 143 RRVMSEMLQRCAKNCEKSYTERTICAEDARNVFNSIAVFYEDHGALTRAYAFYKKSVHFC 202
             +  E L    KN + +  + +I     R   + +   Y D G L+ A   Y ++  +C
Sbjct: 142 ALLKLEKLDTDLKNYKGNSIKESI-----RRGHDDLGDHYLDCGDLSNALKCYSRARDYC 201

Query: 203 RSDKNYSELLRRLIVVVIELGQF----------EASAEIAEKGMQYPNLNPITMETLRCA 262
            S K+   +   +I V + L  +          E++ EIAE+  +  +     +  L+CA
Sbjct: 202 TSAKHVINMCLNVIKVSVYLQNWSHVLSYVSKAESTPEIAEQRGERDSQTQAVLTKLKCA 261

Query: 263 LGLARFKSHCYKDAAHQTS--------------------------------------VMD 322
            GLA   +  YK AA                                          V+ 
Sbjct: 262 AGLAELAARKYKQAAKCFLLASFDHCDFPELLSPSNVAVYGGLCALATFDRQELQRNVIS 321

Query: 323 NQNFHFYLDSALEVKELVRDFYLRRYCSCFRHLDNLREWLLADIYFFNHYETLYNKIRNR 373
           + +F  +L+   +V++++  FY  +Y SC + LD +++ LL D+Y   H  TLY +IRNR
Sbjct: 322 SSSFKLFLELEPQVRDIIFKFYESKYASCLKMLDEIKDNLLLDMYLAPHVRTLYTQIRNR 381

BLAST of CmaCh17G000170 vs. Swiss-Prot
Match: CSN1_MOUSE (COP9 signalosome complex subunit 1 OS=Mus musculus GN=Gps1 PE=1 SV=1)

HSP 1 Score: 120.9 bits (302), Expect = 3.2e-26
Identity = 99/412 (24.03%), Postives = 179/412 (43.45%), Query Frame = 1

Query: 23  DSDEEEKGYSPTPFLKGGKHFDIQAYASNYHRSTKILRLIFIADRFGNANERRRSMQLEA 82
           D  E+ +      ++      D++ YA++Y    +I RL FIADR          +++EA
Sbjct: 6   DPQEDPQNAPDVNYVVENPTLDLEQYAASYSGLMRIERLQFIADRCP-------PLRVEA 65

Query: 83  LRIAYDIAKKGKDVNVFIKIVRKIDGRLGPNYD--------------MDENWCNSVIEGR 142
           L++A    ++  +V+++ +I RK+        +              +D  W  +  +  
Sbjct: 66  LKMALSFVQRTFNVDMYEEIHRKLSEATRELQNAPDAIPESGVEPPPLDTAWVEATRKKA 125

Query: 143 RVMSEMLQRCAKNCEKSYTERTICAEDARNVFNSIAVFYEDHGALTRAYAFYKKSVHFCR 202
            +  E L    KN + +  + +I     R   + +   Y D G L+ A   Y ++  +C 
Sbjct: 126 LLKLEKLDTDLKNYKGNSIKESI-----RRGHDDLGDHYLDCGDLSNALKCYSRARDYCT 185

Query: 203 SDKNYSELLRRLIVVVIELGQF----------EASAEIAEKGMQYPNLNPITMETLRCAL 262
           S K+   +   +I V + L  +          E++ EIAE+  +  +     +  L+CA 
Sbjct: 186 SAKHVINMCLNVIKVSVYLQNWSHVLSYVSKAESTPEIAEQRGERDSQTQAILTKLKCAA 245

Query: 263 GLARFKSHCYKDAAHQTS--------------------------------------VMDN 322
           GLA   +  YK AA                                          V+ +
Sbjct: 246 GLAELAARKYKQAAKCFLLASFDHCDFPELLSPSNVAVYGGLCALATFDRQELQRNVISS 305

Query: 323 QNFHFYLDSALEVKELVRDFYLRRYCSCFRHLDNLREWLLADIYFFNHYETLYNKIRNRA 373
            +F  +L+   +V++++  FY  +Y SC + LD +++ LL D+Y   H  TLY +IRNRA
Sbjct: 306 SSFKLFLELEPQVRDIIFKFYESKYASCLKMLDEMKDNLLLDMYLAPHVRTLYTQIRNRA 365

BLAST of CmaCh17G000170 vs. Swiss-Prot
Match: CSN1_ARATH (COP9 signalosome complex subunit 1 OS=Arabidopsis thaliana GN=CSN1 PE=1 SV=2)

HSP 1 Score: 120.2 bits (300), Expect = 5.5e-26
Identity = 79/216 (36.57%), Postives = 112/216 (51.85%), Query Frame = 1

Query: 40  GKHFDIQAYASNYHRSTKILRLIFIADRFGNANERRRSMQLEALRIAYDIAKKGKDVNVF 99
           G+  DI+AYA+ Y   TKI+RL+FIA+  G       ++Q +ALR+AYD  KKG++  +F
Sbjct: 31  GEPLDIEAYAALYKGRTKIMRLLFIANHCGG----NHALQFDALRMAYDEIKKGENTQLF 90

Query: 100 IKIVRKIDGRLGPNYDMDENWCNSVIEGRRVMSEMLQRCAKNCEKSYTERTICAEDARNV 159
            ++V KI  RLG  Y MD  WC +V   RR   + ++   +N   SY    I  E  R  
Sbjct: 91  REVVNKIGNRLGEKYGMDLAWCEAV--DRRAEQKKVK--LENELSSYRTNLI-KESIRMG 150

Query: 160 FNSIAVFYEDHGALTRAYAFYKKSVHFCRSDKNYSELLRRLIVVVIELGQFEASAEIAEK 219
           +N    FY   G L  A+  Y ++  +C + K+   +    I+V IE+GQF        K
Sbjct: 151 YNDFGDFYYACGMLGDAFKNYIRTRDYCTTTKHIIHMCMNAILVSIEMGQFTHVTSYVNK 210

Query: 220 GMQYP-NLNPITMETLRCALGLARFKSHCYKDAAHQ 255
             Q P  L P+    LRCA GLA  +   YK AA +
Sbjct: 211 AEQNPETLEPMVNAKLRCASGLAHLELKKYKLAARK 237

BLAST of CmaCh17G000170 vs. Swiss-Prot
Match: CSN1_RAT (COP9 signalosome complex subunit 1 OS=Rattus norvegicus GN=Gps1 PE=1 SV=1)

HSP 1 Score: 119.8 bits (299), Expect = 7.2e-26
Identity = 98/412 (23.79%), Postives = 179/412 (43.45%), Query Frame = 1

Query: 23  DSDEEEKGYSPTPFLKGGKHFDIQAYASNYHRSTKILRLIFIADRFGNANERRRSMQLEA 82
           D  E+ +      ++      D++ YA++Y    +I RL FIADR          +++EA
Sbjct: 6   DPQEDPQNAPDVNYVVENPTLDLEQYAASYSGLMRIERLQFIADRCP-------PLRVEA 65

Query: 83  LRIAYDIAKKGKDVNVFIKIVRKIDGRLGPNYD--------------MDENWCNSVIEGR 142
           L++A    ++  +V+++ +I RK+        +              +D  W  +  +  
Sbjct: 66  LKMALSFVQRTFNVDMYEEIHRKLSEATRELQNAPDAIPESGVEPPPLDTAWVEATRKKA 125

Query: 143 RVMSEMLQRCAKNCEKSYTERTICAEDARNVFNSIAVFYEDHGALTRAYAFYKKSVHFCR 202
            +  E L    KN + +  + +I     R   + +   Y D G L+ A   Y ++  +C 
Sbjct: 126 LLKLEKLDTDLKNYKGNSIKESI-----RRGHDDLGDHYLDCGDLSNALKCYSRARDYCT 185

Query: 203 SDKNYSELLRRLIVVVIELGQF----------EASAEIAEKGMQYPNLNPITMETLRCAL 262
           S K+   +   +I V + L  +          E++ EIAE+  +  +     +  L+CA 
Sbjct: 186 SAKHVINMCLNVIKVSVYLQNWSHVLSYVSKAESTPEIAEQRGERDSQTQAILTKLKCAA 245

Query: 263 GLARFKSHCYKDAAHQTS--------------------------------------VMDN 322
           GLA   +  YK AA                                          V+ +
Sbjct: 246 GLAELAARKYKQAAKCFLLASFDHCDFPELLSPSNVAVYGGLCALATFDRQELQRNVISS 305

Query: 323 QNFHFYLDSALEVKELVRDFYLRRYCSCFRHLDNLREWLLADIYFFNHYETLYNKIRNRA 373
            +F  +L+   +V++++  FY  +Y SC + LD +++ LL D+Y   H  TLY +IRNRA
Sbjct: 306 SSFKLFLELEPQVRDIIFKFYESKYASCLKMLDEMKDNLLLDMYLAPHVRTLYTQIRNRA 365

BLAST of CmaCh17G000170 vs. Swiss-Prot
Match: CSN1_HUMAN (COP9 signalosome complex subunit 1 OS=Homo sapiens GN=GPS1 PE=1 SV=4)

HSP 1 Score: 110.9 bits (276), Expect = 3.3e-23
Identity = 96/409 (23.47%), Postives = 168/409 (41.08%), Query Frame = 1

Query: 23  DSDEEEKGYSPTPFLKGGKHFDIQAYASNYHRSTKILRLIFIADRFGNANERRRSMQLEA 82
           D  E+ +      ++      D++ YA++Y    +I RL FIAD           M L  
Sbjct: 22  DPQEDPQNAPDVNYVVENPSLDLEQYAASYSGLMRIERLQFIADHCPTLRVEALKMALSF 81

Query: 83  LRIAYDIAKKGKDVNVFIKIVRKIDGRLGPNYD-----------MDENWCNSVIEGRRVM 142
           ++  +++    +      +  R     L    D           +D  W  +  +   + 
Sbjct: 82  VQRTFNVDMYEEIHRKLSEATRSSLRELQNAPDAIPESGVEPPALDTAWVEATRKKALLK 141

Query: 143 SEMLQRCAKNCEKSYTERTICAEDARNVFNSIAVFYEDHGALTRAYAFYKKSVHFCRSDK 202
            E L    KN + +  + +I     R   + +   Y D G L+ A   Y ++  +C S K
Sbjct: 142 LEKLDTDLKNYKGNSIKESI-----RRGHDDLGDHYLDCGDLSNALKCYSRARDYCTSAK 201

Query: 203 NYSELLRRLIVVVIELGQF----------EASAEIAEKGMQYPNLNPITMETLRCALGLA 262
           +   +   +I V + L  +          E++ EIAE+  +  +     +  L+CA GLA
Sbjct: 202 HVINMCLNVIKVSVYLQNWSHVLSYVSKAESTPEIAEQRGERDSQTQAILTKLKCAAGLA 261

Query: 263 RFKSHCYKDAAHQTSV--------------------------------------MDNQNF 322
              +  YK AA    +                                      + + +F
Sbjct: 262 ELAARKYKQAAKCLLLASFDHCDFPELLSPSNVAIYGGLCALATFDRQELQRNVISSSSF 321

Query: 323 HFYLDSALEVKELVRDFYLRRYCSCFRHLDNLREWLLADIYFFNHYETLYNKIRNRALIV 373
             +L+   +V++++  FY  +Y SC + LD +++ LL D+Y   H  TLY +IRNRALI 
Sbjct: 322 KLFLELEPQVRDIIFKFYESKYASCLKMLDEMKDNLLLDMYLAPHVRTLYTQIRNRALIQ 381

BLAST of CmaCh17G000170 vs. TrEMBL
Match: A0A0B2R546_GLYSO (COP9 signalosome complex subunit 1 OS=Glycine soja GN=glysoja_034637 PE=4 SV=1)

HSP 1 Score: 262.7 bits (670), Expect = 7.6e-67
Identity = 154/383 (40.21%), Postives = 223/383 (58.22%), Query Frame = 1

Query: 16  EDNYGNFDSDEEEKGYSPTPFLKGGKHFDIQAYASNYHRSTKILRLIFIADRFGNANERR 75
           ++ Y N   D+ +KG      +  G   DI+AYA+ Y   TKI+RL+FIAD+  NA    
Sbjct: 13  DEIYANGGGDDGDKGSRRA--IMSGDQVDIEAYAALYSGRTKIMRLLFIADKMNNA---- 72

Query: 76  RSMQLEALRIAYDIAKKGKDVNVFIKIVRKIDGRLGPNYDMDENWCNSVIEGRRVMSEML 135
            + QLEALR+AYD  KKG++  +F ++V+KIDGRLGPNY MD  WC+++        E L
Sbjct: 73  -ATQLEALRMAYDEIKKGENTQLFREVVQKIDGRLGPNYGMDAAWCDAIDRRAEQKKEKL 132

Query: 136 QRCAKNCEKSYTERTICAEDARNVFNSIAVFYEDHGALTRAYAFYKKSVHFCRSDKNYSE 195
           +      E +     +  E  R  +N    FY  HG L  A+  Y ++  +C + K+   
Sbjct: 133 EN-----ELNAYRTNLIKESIRMGYNDFGEFYYAHGQLGDAFKSYVRTRDYCTTSKHIVH 192

Query: 196 LLRRLIVVVIELGQFEASAEIAEKGMQYPN-LNPITMETLRCALGLARFKSHCYKDAAHQ 255
           +    I+V IE+GQF        K  Q P+ L  +T+  LRCA GLA  ++  YK AA +
Sbjct: 193 MCMSAILVSIEMGQFPHVTSYVSKAEQSPDALEAVTVAKLRCAAGLANLEAKKYKLAARK 252

Query: 256 TSVMDNQNFHFYLDSALEVKELVRDFYLRRYCSCFRHLDNLREWLLADIYFFNHYETLYN 315
           + V+DN NF  +L+   E +EL+ DFY   Y SC  +L NL+  LL DI+  +H ETLY+
Sbjct: 253 SKVIDNSNFRNFLELVPEARELINDFYSSHYASCLEYLGNLKANLLLDIHLHDHVETLYD 312

Query: 316 KIRNRALIVYTEPFVAVGLQRVAVVFGTNIEAIEKQLLALINTNQIQADVDSINKVVHFP 375
           +IR++ALI YT PFV+V L  +A  F T +  +EK+L ALI  NQIQA +DS NK++ + 
Sbjct: 313 QIRHKALIQYTLPFVSVDLNMMANAFKTTVAGLEKELEALITDNQIQARIDSHNKIL-YA 372

Query: 376 RH--EGNGSFPQGLQSSVAEFDQ 396
           RH  + N +F + L++   EFD+
Sbjct: 373 RHADQRNATFQRVLETG-REFDR 381

BLAST of CmaCh17G000170 vs. TrEMBL
Match: A0A0B0MIS6_GOSAR (COP9 signalosome complex subunit 1-like protein OS=Gossypium arboreum GN=F383_25151 PE=4 SV=1)

HSP 1 Score: 245.4 bits (625), Expect = 1.3e-61
Identity = 159/420 (37.86%), Postives = 227/420 (54.05%), Query Frame = 1

Query: 9   DGHSDKP----EDNYGNFDSDEEEKGYSPTPF-------LKGGKHFDIQAYASNYHRSTK 68
           DG  D P    E+ Y N     ++   S T         +  G+  DI+AYA+ Y   TK
Sbjct: 2   DGEDDAPKSLMEEMYANGIEGVDDAPSSSTSTTIRKNRPIISGEQLDIEAYAALYSGRTK 61

Query: 69  ILRLIFIADRFGNANERRRSMQLEALRIAYDIAKKGKDVNVFIKIVRKIDGRLGPNYDMD 128
           I+RLIF+AD   N+      MQLEALR+AYD  KKG++  +F ++V+KIDGRLGPNY MD
Sbjct: 62  IMRLIFLADHCDNSG-----MQLEALRMAYDELKKGENTQLFREVVQKIDGRLGPNYSMD 121

Query: 129 ENWCNSVIEGRRVMSEMLQRCAKNCEKSYTERTICAEDARNVFNSIAVFYEDHGALTRAY 188
             WC  V        + L+      E +     +  E  R  +N    FY  HGAL  A+
Sbjct: 122 ATWCAMVDRKADQRKDKLES-----ELNAYRTNLIKESIRMGYNDFGDFYYAHGALGDAF 181

Query: 189 AFYKKSVHFCRSDKNYSELLRRLIVVVIELGQFEASAEIAEKGMQYPN-LNPITMETLRC 248
             Y ++  +C + K+  ++    I+V IE+GQF        K  Q P  L+P T+  LRC
Sbjct: 182 KSYVRTRDYCTTSKHIIQMCLSAILVSIEMGQFAHVTSYVSKAEQTPEALDPPTIAKLRC 241

Query: 249 ALGLARFKSHCYKDAAHQ--------------------TSVMDNQNFHFYLDSALEVKEL 308
           A GLA  ++  YK AA +                      V+DN NF  +L+   EV+EL
Sbjct: 242 AAGLAHLEAKKYKLAARKFLEVGPELGNSYSEVIAPQDNKVIDNINFRNFLELVPEVREL 301

Query: 309 VRDFYLRRYCSCFRHLDNLREWLLADIYFFNHYETLYNKIRNRALIVYTEPFVAVGLQRV 368
           + DFY   Y SC  +L NL+  L+ DI+  +H ETLY++IR++ALI YT PFV+V ++ +
Sbjct: 302 INDFYSSHYASCLEYLGNLKSNLMLDIHIHDHVETLYDQIRSKALIQYTHPFVSVDMRMM 361

Query: 369 AVVFGTNIEAIEKQLLALINTNQIQADVDSINKVVHFPRH--EGNGSFPQGLQSSVAEFD 395
           A  F T++  +EK+L +LI  NQIQA +DS NK++ + RH  + N +F + LQ+   EFD
Sbjct: 362 ADAFKTSVAGLEKELESLITDNQIQARIDSHNKIL-YARHADQRNATFQRVLQTG-NEFD 409

BLAST of CmaCh17G000170 vs. TrEMBL
Match: A0A0B0NYC0_GOSAR (COP9 signalosome complex subunit 1-like protein OS=Gossypium arboreum GN=F383_22356 PE=4 SV=1)

HSP 1 Score: 238.8 bits (608), Expect = 1.2e-59
Identity = 147/380 (38.68%), Postives = 214/380 (56.32%), Query Frame = 1

Query: 40  GKHFDIQAYASNYHRSTKILRLIFIADRFGNANERRRSMQLEALRIAYDIAKKGKDVNVF 99
           G+  DI+AYA  Y   TKI RL+FIA+   N       MQLEALR+A D  K+G++ +++
Sbjct: 42  GEPLDIEAYAGLYTGRTKIKRLMFIANHCDNPG-----MQLEALRMANDEIKRGENTHLY 101

Query: 100 IKIVRKIDGRLGPNYDMDENWCNSVIEGRRVMSEMLQRCAKNCEKSYTERTICAEDARNV 159
            ++V+KIDGRLGPNY MD  WC+++        E L+      E +     +  E  R  
Sbjct: 102 REVVQKIDGRLGPNYAMDAAWCSTIERKAEQRKEKLES-----ELNAYRTNLIKESIRMG 161

Query: 160 FNSIAVFYEDHGALTRAYAFYKKSVHFCRSDKNYSELLRRLIVVVIELGQFEASAEIAEK 219
           +N    FY  HGAL  A+  Y ++  +C + K+  ++    I+V IE+ QF        K
Sbjct: 162 YNDFGDFYYAHGALGDAFKSYVRTRDYCTTSKHIIQMCLNAILVSIEMVQFSNVTSYVSK 221

Query: 220 GMQYPN-LNPITMETLRCALGLARFKSHCYKDAAHQ--------------------TSVM 279
             Q P  L+P T+  L CA GLA  ++  YK AA +                      V+
Sbjct: 222 AEQTPEALDPPTVAKLCCAAGLAHLEAKKYKLAARKFLEVGPELGNSYSEVIAPQDNKVI 281

Query: 280 DNQNFHFYLDSALEVKELVRDFYLRRYCSCFRHLDNLREWLLADIYFFNHYETLYNKIRN 339
           DN NF  +L+   EV+EL+ DFY   Y SC  +L NL+  L+ DI+ ++H ETLY++IRN
Sbjct: 282 DNINFRDFLELVPEVRELINDFYSSHYASCLEYLGNLKSNLMLDIHLYDHVETLYDQIRN 341

Query: 340 RALIVYTEPFVAVGLQRVAVVFGTNIEAIEKQLLALINTNQIQADVDSINKVVHFPRH-- 397
           +ALI YT PFV+V ++ +A  F T++  +EK+L ALI  NQIQA +DS NK++ + RH  
Sbjct: 342 KALIQYTLPFVSVDMRMMADAFKTSVVGLEKELEALITDNQIQARIDSHNKIL-YARHAD 401

BLAST of CmaCh17G000170 vs. TrEMBL
Match: A0A0C9S8Z7_9SPER (TSA: Wollemia nobilis Ref_Wollemi_Transcript_2421_1638 transcribed RNA sequence OS=Wollemia nobilis PE=4 SV=1)

HSP 1 Score: 236.9 bits (603), Expect = 4.5e-59
Identity = 148/406 (36.45%), Postives = 221/406 (54.43%), Query Frame = 1

Query: 32  SPTPFLKGGKHFDIQAYASNYHRSTKILRLIFIADRFGNANERRRSMQLEALRIAYDIAK 91
           SP   +   +  D++AYAS Y   TKI+RL+FIADR GN     +S+ LEALR+AYD  K
Sbjct: 24  SPGAAITSSEQLDVEAYASLYTGRTKIVRLMFIADRCGN-----QSVALEALRMAYDEIK 83

Query: 92  KGKDVNVFIKIVRKIDGRLGPNYDMDENWCNSVIEGRRVMSEMLQRCAKNCEKSYTERTI 151
           KG++     ++V+KIDGRLGP Y +D++W ++         E L+      E +  +  +
Sbjct: 84  KGENTQQMKEVVQKIDGRLGPAYALDQDWIDAADRRAEQRKEKLEN-----ELNGYKTNL 143

Query: 152 CAEDARNVFNSIAVFYEDHGALTRAYAFYKKSVHFCRSDKNYSELLRRLIVVVIELGQFE 211
             E  R  +N    F+  HG L  A+  Y ++  +C + K+  ++   +I+V IE+GQF 
Sbjct: 144 IKESIRMGYNDFGDFFYAHGMLADAFKNYVRTRDYCTTSKHIIQMCLNVILVSIEMGQFM 203

Query: 212 ASAEIAEKGMQYPNL-NPITMETLRCALGLARFKSHCYKDAAHQ---------------- 271
             +    K  Q P++ +P+ +  L+CA GLA  +S  YK AA +                
Sbjct: 204 HVSSYVTKAEQTPDVQDPLVLAKLKCAAGLAHLESKKYKLAARKFVETFFDLGNTYTEVI 263

Query: 272 -----------------------TSVMDNQNFHFYLDSALEVKELVRDFYLRRYCSCFRH 331
                                    V+DN NF  +L+   EV+EL+ DFY  RY SC  +
Sbjct: 264 APQDVATYGGLCALASFDRAELKNKVIDNINFRNFLELVPEVRELIHDFYSSRYASCLEY 323

Query: 332 LDNLREWLLADIYFFNHYETLYNKIRNRALIVYTEPFVAVGLQRVAVVFGTNIEAIEKQL 391
           L NL+  LL DI+  +H ETLY++IR +ALI YT PF++V L  +A  F T++  +EK+L
Sbjct: 324 LQNLKSNLLLDIHLHDHVETLYDQIRYKALIQYTNPFISVDLHTMANAFKTSVAGLEKEL 383

Query: 392 LALINTNQIQADVDSINKVVHFPRH--EGNGSFPQGLQSSVAEFDQ 396
            ALI  NQIQA +DS NK++ + RH  + N +F + LQ+ V EFD+
Sbjct: 384 EALIMDNQIQARIDSHNKIL-YARHADQRNTTFQRVLQTGV-EFDR 417

BLAST of CmaCh17G000170 vs. TrEMBL
Match: S8DVW8_9LAMI (Uncharacterized protein (Fragment) OS=Genlisea aurea GN=M569_10712 PE=4 SV=1)

HSP 1 Score: 232.6 bits (592), Expect = 8.5e-58
Identity = 154/430 (35.81%), Postives = 223/430 (51.86%), Query Frame = 1

Query: 16  EDNYGNFDSDEEEKGY--------SPTPFLKGGKHFDIQAYASNYHRSTKILRLIFIADR 75
           ED  G   +DEE  G         S    +  G+  DI+AYA+ Y   TKI RLIFIA++
Sbjct: 5   EDAAGTIVADEEIYGNGGVHVGESSRNRPIISGEQLDIEAYAALYTGRTKISRLIFIAEK 64

Query: 76  FGNANERRRSMQLEALRIAYDIAKKGKDVNVFIKIVRKIDGRLGPNYDMDENWCNSVIEG 135
            G       SMQLEALR+AYD  KKG++  +F ++V KID RLGP+Y  D +W ++V   
Sbjct: 65  CGVP-----SMQLEALRMAYDEIKKGENTQLFREVVAKIDMRLGPDYGPDNSWADAVDRR 124

Query: 136 RRVMSEMLQRCAKNCEKSYTERTICAEDARNVFNSIAVFYEDHGALTRAYAFYKKSVHFC 195
             +  E L+      E +     +  E  R  +N    FY  HG L  A+  Y ++  +C
Sbjct: 125 AELKKEKLEN-----ELNAYRTNLIKESIRMGYNDFGDFYYAHGQLPEAFKNYIRTRDYC 184

Query: 196 RSDKNYSELLRRLIVVVIELGQFEASAEIAEKGMQYPNLNPITMETLRCALGLARFKSHC 255
            + K+ + +    I+V IE+GQF   +    K     +L+PIT   L+CA GLA      
Sbjct: 185 TTAKHITNMCMNAILVSIEMGQFTHVSSYVSKAETQDSLDPITATKLKCAAGLAHLDGKK 244

Query: 256 YKDAAH---------------------------------------QTSVMDNQNFHFYLD 315
           YK AA                                        ++ V+DN NF  +L+
Sbjct: 245 YKLAARKFLETGPELGNHYTEVIAPQDVATYGSLCALATFDRAELKSKVIDNVNFRNFLE 304

Query: 316 SALEVKELVRDFYLRRYCSCFRHLDNLREWLLADIYFFNHYETLYNKIRNRALIVYTEPF 375
              EV+EL+ DFY   Y SC  +L NL+  L+ DI+  +H ETLY +IR++ALI +T P+
Sbjct: 305 LVPEVRELINDFYKSHYASCLEYLGNLKSNLMLDIHLHDHVETLYQQIRSKALIQFTLPY 364

Query: 376 VAVGLQRVAVVFGTNIEAIEKQLLALINTNQIQADVDSINKVVHFPRH--EGNGSFPQGL 397
           V+V L  +A  F T +  +EK+L ALI  +QIQA +DS NK++ + RH  + NG+F + L
Sbjct: 365 VSVDLHMMATAFKTTVTGLEKELEALITNDQIQARIDSHNKIL-YARHADQRNGTFQRVL 422

BLAST of CmaCh17G000170 vs. TAIR10
Match: AT3G61140.1 (AT3G61140.1 26S proteasome, regulatory subunit Rpn7;Proteasome component (PCI) domain)

HSP 1 Score: 120.2 bits (300), Expect = 3.1e-27
Identity = 79/216 (36.57%), Postives = 112/216 (51.85%), Query Frame = 1

Query: 40  GKHFDIQAYASNYHRSTKILRLIFIADRFGNANERRRSMQLEALRIAYDIAKKGKDVNVF 99
           G+  DI+AYA+ Y   TKI+RL+FIA+  G       ++Q +ALR+AYD  KKG++  +F
Sbjct: 31  GEPLDIEAYAALYKGRTKIMRLLFIANHCGG----NHALQFDALRMAYDEIKKGENTQLF 90

Query: 100 IKIVRKIDGRLGPNYDMDENWCNSVIEGRRVMSEMLQRCAKNCEKSYTERTICAEDARNV 159
            ++V KI  RLG  Y MD  WC +V   RR   + ++   +N   SY    I  E  R  
Sbjct: 91  REVVNKIGNRLGEKYGMDLAWCEAV--DRRAEQKKVK--LENELSSYRTNLI-KESIRMG 150

Query: 160 FNSIAVFYEDHGALTRAYAFYKKSVHFCRSDKNYSELLRRLIVVVIELGQFEASAEIAEK 219
           +N    FY   G L  A+  Y ++  +C + K+   +    I+V IE+GQF        K
Sbjct: 151 YNDFGDFYYACGMLGDAFKNYIRTRDYCTTTKHIIHMCMNAILVSIEMGQFTHVTSYVNK 210

Query: 220 GMQYP-NLNPITMETLRCALGLARFKSHCYKDAAHQ 255
             Q P  L P+    LRCA GLA  +   YK AA +
Sbjct: 211 AEQNPETLEPMVNAKLRCASGLAHLELKKYKLAARK 237

BLAST of CmaCh17G000170 vs. TAIR10
Match: AT3G12850.1 (AT3G12850.1 COP9 signalosome complex-related / CSN complex-related)

HSP 1 Score: 59.7 bits (143), Expect = 5.0e-09
Identity = 64/299 (21.40%), Postives = 115/299 (38.46%), Query Frame = 1

Query: 44  DIQAYASNYHRSTKILRLIFIADRFGNANERRRSMQLEALRIAYDIAKKGK---DVNVFI 103
           D++AY+ NY     +LRL+ IA+           ++LEALR+AYD+ +      D+ +F 
Sbjct: 12  DVEAYSRNYEGRNLVLRLLHIAEN-SVGPMFTDDLELEALRLAYDLIRNDGIVCDMRLFT 71

Query: 104 KIVRKIDGRLGPNYDMDENW----CNSVIEGRRVMSEMLQRCAKNCEK------SYTERT 163
            I  KI GRLG  Y +DE W     N+ ++   ++   L+      EK       Y    
Sbjct: 72  VIAEKIQGRLGEGYLLDEKWRLTKNNNFVKQDSILRNDLESATDELEKDRLALRQYWLHY 131

Query: 164 ICAEDARNVFNSIAVFYEDHGALTRAYAFYKKSVHFCRSDKNYSELLRRLIVVVIELGQF 223
            C +        +A+ +  +    +    Y  ++      +N+ EL  R +         
Sbjct: 132 HCGQ--------MAIVFRPYPRQVQTIDAYMATLLVALETRNFGELPHRSV--------- 191

Query: 224 EASAEIAEKGMQYPNLNPITMETLRCALGLARFKSHCYKDAAHQTSVMDNQNFHFYLDSA 283
                   + + Y N+       + C   L+      Y+  A   +V    N    + S 
Sbjct: 192 --------EQIAYCNVKRAYGFKIDCFKSLSNLLESKYQVTAEGNAVDTIVNPIGQVASH 251

Query: 284 LE-----------VKELVRDFYLRRYCSCFRHLDNLREWLLADIYFFNHYETLYNKIRN 319
           LE           + ++++      +  C   L+  R  LL D Y  +H + L + +R+
Sbjct: 252 LENVIKPFGPCDYLIDVIKKLLAGHFTDCMTLLEKQRPRLLLDFYLRDHVDNLLSMMRD 284

BLAST of CmaCh17G000170 vs. NCBI nr
Match: gi|734391644|gb|KHN27284.1| (COP9 signalosome complex subunit 1 [Glycine soja])

HSP 1 Score: 262.7 bits (670), Expect = 1.1e-66
Identity = 154/383 (40.21%), Postives = 223/383 (58.22%), Query Frame = 1

Query: 16  EDNYGNFDSDEEEKGYSPTPFLKGGKHFDIQAYASNYHRSTKILRLIFIADRFGNANERR 75
           ++ Y N   D+ +KG      +  G   DI+AYA+ Y   TKI+RL+FIAD+  NA    
Sbjct: 13  DEIYANGGGDDGDKGSRRA--IMSGDQVDIEAYAALYSGRTKIMRLLFIADKMNNA---- 72

Query: 76  RSMQLEALRIAYDIAKKGKDVNVFIKIVRKIDGRLGPNYDMDENWCNSVIEGRRVMSEML 135
            + QLEALR+AYD  KKG++  +F ++V+KIDGRLGPNY MD  WC+++        E L
Sbjct: 73  -ATQLEALRMAYDEIKKGENTQLFREVVQKIDGRLGPNYGMDAAWCDAIDRRAEQKKEKL 132

Query: 136 QRCAKNCEKSYTERTICAEDARNVFNSIAVFYEDHGALTRAYAFYKKSVHFCRSDKNYSE 195
           +      E +     +  E  R  +N    FY  HG L  A+  Y ++  +C + K+   
Sbjct: 133 EN-----ELNAYRTNLIKESIRMGYNDFGEFYYAHGQLGDAFKSYVRTRDYCTTSKHIVH 192

Query: 196 LLRRLIVVVIELGQFEASAEIAEKGMQYPN-LNPITMETLRCALGLARFKSHCYKDAAHQ 255
           +    I+V IE+GQF        K  Q P+ L  +T+  LRCA GLA  ++  YK AA +
Sbjct: 193 MCMSAILVSIEMGQFPHVTSYVSKAEQSPDALEAVTVAKLRCAAGLANLEAKKYKLAARK 252

Query: 256 TSVMDNQNFHFYLDSALEVKELVRDFYLRRYCSCFRHLDNLREWLLADIYFFNHYETLYN 315
           + V+DN NF  +L+   E +EL+ DFY   Y SC  +L NL+  LL DI+  +H ETLY+
Sbjct: 253 SKVIDNSNFRNFLELVPEARELINDFYSSHYASCLEYLGNLKANLLLDIHLHDHVETLYD 312

Query: 316 KIRNRALIVYTEPFVAVGLQRVAVVFGTNIEAIEKQLLALINTNQIQADVDSINKVVHFP 375
           +IR++ALI YT PFV+V L  +A  F T +  +EK+L ALI  NQIQA +DS NK++ + 
Sbjct: 313 QIRHKALIQYTLPFVSVDLNMMANAFKTTVAGLEKELEALITDNQIQARIDSHNKIL-YA 372

Query: 376 RH--EGNGSFPQGLQSSVAEFDQ 396
           RH  + N +F + L++   EFD+
Sbjct: 373 RHADQRNATFQRVLETG-REFDR 381

BLAST of CmaCh17G000170 vs. NCBI nr
Match: gi|728816175|gb|KHG02078.1| (COP9 signalosome complex subunit 1 -like protein [Gossypium arboreum])

HSP 1 Score: 245.4 bits (625), Expect = 1.8e-61
Identity = 159/420 (37.86%), Postives = 227/420 (54.05%), Query Frame = 1

Query: 9   DGHSDKP----EDNYGNFDSDEEEKGYSPTPF-------LKGGKHFDIQAYASNYHRSTK 68
           DG  D P    E+ Y N     ++   S T         +  G+  DI+AYA+ Y   TK
Sbjct: 2   DGEDDAPKSLMEEMYANGIEGVDDAPSSSTSTTIRKNRPIISGEQLDIEAYAALYSGRTK 61

Query: 69  ILRLIFIADRFGNANERRRSMQLEALRIAYDIAKKGKDVNVFIKIVRKIDGRLGPNYDMD 128
           I+RLIF+AD   N+      MQLEALR+AYD  KKG++  +F ++V+KIDGRLGPNY MD
Sbjct: 62  IMRLIFLADHCDNSG-----MQLEALRMAYDELKKGENTQLFREVVQKIDGRLGPNYSMD 121

Query: 129 ENWCNSVIEGRRVMSEMLQRCAKNCEKSYTERTICAEDARNVFNSIAVFYEDHGALTRAY 188
             WC  V        + L+      E +     +  E  R  +N    FY  HGAL  A+
Sbjct: 122 ATWCAMVDRKADQRKDKLES-----ELNAYRTNLIKESIRMGYNDFGDFYYAHGALGDAF 181

Query: 189 AFYKKSVHFCRSDKNYSELLRRLIVVVIELGQFEASAEIAEKGMQYPN-LNPITMETLRC 248
             Y ++  +C + K+  ++    I+V IE+GQF        K  Q P  L+P T+  LRC
Sbjct: 182 KSYVRTRDYCTTSKHIIQMCLSAILVSIEMGQFAHVTSYVSKAEQTPEALDPPTIAKLRC 241

Query: 249 ALGLARFKSHCYKDAAHQ--------------------TSVMDNQNFHFYLDSALEVKEL 308
           A GLA  ++  YK AA +                      V+DN NF  +L+   EV+EL
Sbjct: 242 AAGLAHLEAKKYKLAARKFLEVGPELGNSYSEVIAPQDNKVIDNINFRNFLELVPEVREL 301

Query: 309 VRDFYLRRYCSCFRHLDNLREWLLADIYFFNHYETLYNKIRNRALIVYTEPFVAVGLQRV 368
           + DFY   Y SC  +L NL+  L+ DI+  +H ETLY++IR++ALI YT PFV+V ++ +
Sbjct: 302 INDFYSSHYASCLEYLGNLKSNLMLDIHIHDHVETLYDQIRSKALIQYTHPFVSVDMRMM 361

Query: 369 AVVFGTNIEAIEKQLLALINTNQIQADVDSINKVVHFPRH--EGNGSFPQGLQSSVAEFD 395
           A  F T++  +EK+L +LI  NQIQA +DS NK++ + RH  + N +F + LQ+   EFD
Sbjct: 362 ADAFKTSVAGLEKELESLITDNQIQARIDSHNKIL-YARHADQRNATFQRVLQTG-NEFD 409

BLAST of CmaCh17G000170 vs. NCBI nr
Match: gi|728837396|gb|KHG16839.1| (COP9 signalosome complex subunit 1 -like protein [Gossypium arboreum])

HSP 1 Score: 238.8 bits (608), Expect = 1.7e-59
Identity = 147/380 (38.68%), Postives = 214/380 (56.32%), Query Frame = 1

Query: 40  GKHFDIQAYASNYHRSTKILRLIFIADRFGNANERRRSMQLEALRIAYDIAKKGKDVNVF 99
           G+  DI+AYA  Y   TKI RL+FIA+   N       MQLEALR+A D  K+G++ +++
Sbjct: 42  GEPLDIEAYAGLYTGRTKIKRLMFIANHCDNPG-----MQLEALRMANDEIKRGENTHLY 101

Query: 100 IKIVRKIDGRLGPNYDMDENWCNSVIEGRRVMSEMLQRCAKNCEKSYTERTICAEDARNV 159
            ++V+KIDGRLGPNY MD  WC+++        E L+      E +     +  E  R  
Sbjct: 102 REVVQKIDGRLGPNYAMDAAWCSTIERKAEQRKEKLES-----ELNAYRTNLIKESIRMG 161

Query: 160 FNSIAVFYEDHGALTRAYAFYKKSVHFCRSDKNYSELLRRLIVVVIELGQFEASAEIAEK 219
           +N    FY  HGAL  A+  Y ++  +C + K+  ++    I+V IE+ QF        K
Sbjct: 162 YNDFGDFYYAHGALGDAFKSYVRTRDYCTTSKHIIQMCLNAILVSIEMVQFSNVTSYVSK 221

Query: 220 GMQYPN-LNPITMETLRCALGLARFKSHCYKDAAHQ--------------------TSVM 279
             Q P  L+P T+  L CA GLA  ++  YK AA +                      V+
Sbjct: 222 AEQTPEALDPPTVAKLCCAAGLAHLEAKKYKLAARKFLEVGPELGNSYSEVIAPQDNKVI 281

Query: 280 DNQNFHFYLDSALEVKELVRDFYLRRYCSCFRHLDNLREWLLADIYFFNHYETLYNKIRN 339
           DN NF  +L+   EV+EL+ DFY   Y SC  +L NL+  L+ DI+ ++H ETLY++IRN
Sbjct: 282 DNINFRDFLELVPEVRELINDFYSSHYASCLEYLGNLKSNLMLDIHLYDHVETLYDQIRN 341

Query: 340 RALIVYTEPFVAVGLQRVAVVFGTNIEAIEKQLLALINTNQIQADVDSINKVVHFPRH-- 397
           +ALI YT PFV+V ++ +A  F T++  +EK+L ALI  NQIQA +DS NK++ + RH  
Sbjct: 342 KALIQYTLPFVSVDMRMMADAFKTSVVGLEKELEALITDNQIQARIDSHNKIL-YARHAD 401

BLAST of CmaCh17G000170 vs. NCBI nr
Match: gi|527194448|gb|EPS64067.1| (hypothetical protein M569_10712, partial [Genlisea aurea])

HSP 1 Score: 232.6 bits (592), Expect = 1.2e-57
Identity = 154/430 (35.81%), Postives = 223/430 (51.86%), Query Frame = 1

Query: 16  EDNYGNFDSDEEEKGY--------SPTPFLKGGKHFDIQAYASNYHRSTKILRLIFIADR 75
           ED  G   +DEE  G         S    +  G+  DI+AYA+ Y   TKI RLIFIA++
Sbjct: 5   EDAAGTIVADEEIYGNGGVHVGESSRNRPIISGEQLDIEAYAALYTGRTKISRLIFIAEK 64

Query: 76  FGNANERRRSMQLEALRIAYDIAKKGKDVNVFIKIVRKIDGRLGPNYDMDENWCNSVIEG 135
            G       SMQLEALR+AYD  KKG++  +F ++V KID RLGP+Y  D +W ++V   
Sbjct: 65  CGVP-----SMQLEALRMAYDEIKKGENTQLFREVVAKIDMRLGPDYGPDNSWADAVDRR 124

Query: 136 RRVMSEMLQRCAKNCEKSYTERTICAEDARNVFNSIAVFYEDHGALTRAYAFYKKSVHFC 195
             +  E L+      E +     +  E  R  +N    FY  HG L  A+  Y ++  +C
Sbjct: 125 AELKKEKLEN-----ELNAYRTNLIKESIRMGYNDFGDFYYAHGQLPEAFKNYIRTRDYC 184

Query: 196 RSDKNYSELLRRLIVVVIELGQFEASAEIAEKGMQYPNLNPITMETLRCALGLARFKSHC 255
            + K+ + +    I+V IE+GQF   +    K     +L+PIT   L+CA GLA      
Sbjct: 185 TTAKHITNMCMNAILVSIEMGQFTHVSSYVSKAETQDSLDPITATKLKCAAGLAHLDGKK 244

Query: 256 YKDAAH---------------------------------------QTSVMDNQNFHFYLD 315
           YK AA                                        ++ V+DN NF  +L+
Sbjct: 245 YKLAARKFLETGPELGNHYTEVIAPQDVATYGSLCALATFDRAELKSKVIDNVNFRNFLE 304

Query: 316 SALEVKELVRDFYLRRYCSCFRHLDNLREWLLADIYFFNHYETLYNKIRNRALIVYTEPF 375
              EV+EL+ DFY   Y SC  +L NL+  L+ DI+  +H ETLY +IR++ALI +T P+
Sbjct: 305 LVPEVRELINDFYKSHYASCLEYLGNLKSNLMLDIHLHDHVETLYQQIRSKALIQFTLPY 364

Query: 376 VAVGLQRVAVVFGTNIEAIEKQLLALINTNQIQADVDSINKVVHFPRH--EGNGSFPQGL 397
           V+V L  +A  F T +  +EK+L ALI  +QIQA +DS NK++ + RH  + NG+F + L
Sbjct: 365 VSVDLHMMATAFKTTVTGLEKELEALITNDQIQARIDSHNKIL-YARHADQRNGTFQRVL 422

BLAST of CmaCh17G000170 vs. NCBI nr
Match: gi|828299192|ref|XP_012569149.1| (PREDICTED: COP9 signalosome complex subunit 1-like [Cicer arietinum])

HSP 1 Score: 227.3 bits (578), Expect = 5.1e-56
Identity = 148/415 (35.66%), Postives = 212/415 (51.08%), Query Frame = 1

Query: 16  EDNYGNFDSDEEEKGYSPTPFLKGGKHFDIQAYASNYHRSTKILRLIFIADRFGNANERR 75
           ++ Y N D D   +     P + G +  DI+AYAS Y   TKI RLIFIAD  G+     
Sbjct: 12  DEIYANGDDDNNNRTIR-RPIISGDQ-LDIEAYASLYSGHTKISRLIFIADHCGD----N 71

Query: 76  RSMQLEALRIAYDIAKKGKDVNVFIKIVRKIDGRLGPNYDMDENWCNSVIEGRRVMSEML 135
            +M+LEALR+A+D  KKG++  +  ++  KIDGRLG +Y +DE WC+ +        E L
Sbjct: 72  LTMRLEALRMAFDEIKKGENTQLMREVANKIDGRLGSDYTLDEAWCDDIDRRAEQKKEKL 131

Query: 136 QRCAKNCEKSYTERTICAEDARNVFNSIAVFYEDHGALTRAYAFYKKSVHFCRSDKNYSE 195
           +      E + +   +  E  R  ++    FY  HG L  AY  Y ++  +C + K+   
Sbjct: 132 EN-----ELNSSRTNLIKESIRMGYHDFGDFYYAHGQLGEAYKSYVRTRDYCTTSKHIVN 191

Query: 196 LLRRLIVVVIELGQFEASAEIAEKGMQYPN-LNPITMETLRCALGLARFKSHCYKDAAH- 255
           +    I+  IE+GQF   +    K  Q    L+ IT   L CA GL+  K+  YK AA  
Sbjct: 192 MCMSAILASIEMGQFSHISSYVGKAEQAREALDTITTSKLHCAAGLSNLKTKKYKQAARK 251

Query: 256 --------------------------------------QTSVMDNQNFHFYLDSALEVKE 315
                                                 ++ V+DN NF  +L+   EV+E
Sbjct: 252 FIETSPELGSHYNEVIASQDVAIYGALCALASFDRTELKSKVIDNSNFRDFLELVPEVRE 311

Query: 316 LVRDFYLRRYCSCFRHLDNLREWLLADIYFFNHYETLYNKIRNRALIVYTEPFVAVGLQR 375
           L+ DFY  RY SC  +L NL+  LL DI+   H ETLY++IR RALI YT PFV+V L  
Sbjct: 312 LINDFYSSRYASCLEYLGNLKSNLLLDIHLHYHVETLYDQIRQRALIQYTHPFVSVDLNM 371

Query: 376 VAVVFGTNIEAIEKQLLALINTNQIQADVDSINKVVHFPRH--EGNGSFPQGLQS 389
           +A  F T +  ++K+L ALI  NQIQA +DS NKV+ + RH  + N +F + L++
Sbjct: 372 MANAFKTTVAGLQKELEALITDNQIQARIDSHNKVL-YARHADQRNATFQRVLET 414

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
CSN1_XENLA3.4e-2824.70COP9 signalosome complex subunit 1 OS=Xenopus laevis GN=csn1 PE=2 SV=1[more]
CSN1_MOUSE3.2e-2624.03COP9 signalosome complex subunit 1 OS=Mus musculus GN=Gps1 PE=1 SV=1[more]
CSN1_ARATH5.5e-2636.57COP9 signalosome complex subunit 1 OS=Arabidopsis thaliana GN=CSN1 PE=1 SV=2[more]
CSN1_RAT7.2e-2623.79COP9 signalosome complex subunit 1 OS=Rattus norvegicus GN=Gps1 PE=1 SV=1[more]
CSN1_HUMAN3.3e-2323.47COP9 signalosome complex subunit 1 OS=Homo sapiens GN=GPS1 PE=1 SV=4[more]
Match NameE-valueIdentityDescription
A0A0B2R546_GLYSO7.6e-6740.21COP9 signalosome complex subunit 1 OS=Glycine soja GN=glysoja_034637 PE=4 SV=1[more]
A0A0B0MIS6_GOSAR1.3e-6137.86COP9 signalosome complex subunit 1-like protein OS=Gossypium arboreum GN=F383_25... [more]
A0A0B0NYC0_GOSAR1.2e-5938.68COP9 signalosome complex subunit 1-like protein OS=Gossypium arboreum GN=F383_22... [more]
A0A0C9S8Z7_9SPER4.5e-5936.45TSA: Wollemia nobilis Ref_Wollemi_Transcript_2421_1638 transcribed RNA sequence ... [more]
S8DVW8_9LAMI8.5e-5835.81Uncharacterized protein (Fragment) OS=Genlisea aurea GN=M569_10712 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT3G61140.13.1e-2736.57 26S proteasome, regulatory subunit Rpn7;Proteasome component (PCI) d... [more]
AT3G12850.15.0e-0921.40 COP9 signalosome complex-related / CSN complex-related[more]
Match NameE-valueIdentityDescription
gi|734391644|gb|KHN27284.1|1.1e-6640.21COP9 signalosome complex subunit 1 [Glycine soja][more]
gi|728816175|gb|KHG02078.1|1.8e-6137.86COP9 signalosome complex subunit 1 -like protein [Gossypium arboreum][more]
gi|728837396|gb|KHG16839.1|1.7e-5938.68COP9 signalosome complex subunit 1 -like protein [Gossypium arboreum][more]
gi|527194448|gb|EPS64067.1|1.2e-5735.81hypothetical protein M569_10712, partial [Genlisea aurea][more]
gi|828299192|ref|XP_012569149.1|5.1e-5635.66PREDICTED: COP9 signalosome complex subunit 1-like [Cicer arietinum][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR000717PCI_dom
IPR011990TPR-like_helical_dom_sf
IPR011991Winged helix-turn-helix DNA-binding domain
Vocabulary: Cellular Component
TermDefinition
GO:0008180COP9 signalosome
Vocabulary: Biological Process
TermDefinition
GO:0010387COP9 signalosome assembly
GO:0010388cullin deneddylation
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0010387 COP9 signalosome assembly
biological_process GO:0000338 protein deneddylation
biological_process GO:0010388 cullin deneddylation
cellular_component GO:0008180 COP9 signalosome
molecular_function GO:0005515 protein binding

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh17G000170.1CmaCh17G000170.1mRNA


Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000717Proteasome component (PCI) domainPFAMPF01399PCIcoord: 273..374
score: 8.5
IPR000717Proteasome component (PCI) domainSMARTSM00088PINT_4coord: 307..389
score: 9.
IPR011990Tetratricopeptide-like helical domainGENE3DG3DSA:1.25.40.10coord: 134..252
score: 6.
IPR011990Tetratricopeptide-like helical domainunknownSSF48452TPR-likecoord: 157..251
score: 3.3
IPR011991Winged helix-turn-helix DNA-binding domainGENE3DG3DSA:1.10.10.10coord: 307..377
score: 1.
IPR011991Winged helix-turn-helix DNA-binding domainunknownSSF46785"Winged helix" DNA-binding domaincoord: 302..378
score: 1.0
NoneNo IPR availablePANTHERPTHR1414526S PROTESOME SUBUNIT 6coord: 43..373
score: 2.6
NoneNo IPR availableSMARTSM00753PINTcoord: 307..389
score: 9.

The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
CmaCh17G000170CmaCh08G009280Cucurbita maxima (Rimu)cmacmaB390
The following block(s) are covering this gene:
GeneOrganismBlock
CmaCh17G000170Melon (DHL92) v3.6.1cmamedB366
CmaCh17G000170Melon (DHL92) v3.6.1cmamedB368
CmaCh17G000170Silver-seed gourdcarcmaB0876
CmaCh17G000170Silver-seed gourdcarcmaB1488
CmaCh17G000170Cucumber (Chinese Long) v3cmacucB0425
CmaCh17G000170Cucumber (Chinese Long) v3cmacucB0441
CmaCh17G000170Cucumber (Chinese Long) v3cmacucB0454
CmaCh17G000170Watermelon (97103) v2cmawmbB370
CmaCh17G000170Watermelon (97103) v2cmawmbB366
CmaCh17G000170Cucurbita maxima (Rimu)cmacmaB249
CmaCh17G000170Cucurbita maxima (Rimu)cmacmaB370
CmaCh17G000170Cucumber (Gy14) v1cgycmaB0997
CmaCh17G000170Cucumber (Gy14) v1cgycmaB0998
CmaCh17G000170Cucurbita moschata (Rifu)cmacmoB350
CmaCh17G000170Cucurbita moschata (Rifu)cmacmoB362
CmaCh17G000170Wild cucumber (PI 183967)cmacpiB361
CmaCh17G000170Wild cucumber (PI 183967)cmacpiB373
CmaCh17G000170Wild cucumber (PI 183967)cmacpiB386
CmaCh17G000170Cucumber (Chinese Long) v2cmacuB357
CmaCh17G000170Cucumber (Chinese Long) v2cmacuB369
CmaCh17G000170Cucumber (Chinese Long) v2cmacuB382
CmaCh17G000170Melon (DHL92) v3.5.1cmameB314
CmaCh17G000170Melon (DHL92) v3.5.1cmameB316
CmaCh17G000170Watermelon (Charleston Gray)cmawcgB323
CmaCh17G000170Watermelon (Charleston Gray)cmawcgB329
CmaCh17G000170Watermelon (97103) v1cmawmB344
CmaCh17G000170Watermelon (97103) v1cmawmB353
CmaCh17G000170Watermelon (97103) v1cmawmB359
CmaCh17G000170Cucurbita pepo (Zucchini)cmacpeB402
CmaCh17G000170Bottle gourd (USVL1VR-Ls)cmalsiB334
CmaCh17G000170Bottle gourd (USVL1VR-Ls)cmalsiB356
CmaCh17G000170Cucumber (Gy14) v2cgybcmaB345
CmaCh17G000170Cucumber (Gy14) v2cgybcmaB753
CmaCh17G000170Cucumber (Gy14) v2cgybcmaB766