CmaCh16G012270 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh16G012270
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	Coffea canephora DH200=94 genomic scaffold, scaffold_62
Location	Cma_Chr16 : 9288049 .. 9290875 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CGTCCTCATTGCAGCATAGGAGAGAGCGGATAAGCCAACGAAAGGAAGAAATGTCTGCAACAATCAAGCACTCATTTCTTTCTCCTTCAAATCCAATTCATCTCTCCGCAATCTCTACAAACTTTCTCAAATCACACCCTTCCTCCATGATCATCTCGCACATACCTTTAAGTTTCTCAACACCGCGTCTCAAAATCGTGAAATGTAGCTCGGAATCGAACGATGAAGCTCAAAACAATGTCAATTTGAATAATGCTTTGTCCAGCATGGTCGGTGAGCAGATTGAGGAACTTTTGAACAAGGAAGAGAATAGGAGTTTGCTCGATGGCTTGGAGAAGGCGTCGATGAGAGTTGAAATCGCCAAAAGGCAGTTGGCTGAGATCGAGAAACAGGAACTTGAGCTCAAACGATTCAAGGATCATATTAACCAGCTCGAAAGTAGAGCATCGGAGGTATTTAATTAATCCCTAATTAATTTCTTGGTGCGACAAAACACTCCTTTGTTATCTGTTTAATTGCAAACCGAGAACCTGACATGCTATTAGATTCAATGATTATATTAGCCAGCTTGAAAACATAGCTTCAGAGGTTTGTTAATCTCTTGATACTCCTGTTATGCAATGAAGTGTTCTTTCTTTGATTATCTATCTTAATGCAAACTAAGAAATCAAGGATGCTCTAGGATTCAAGGATTATATTAACCAACTCGCGGTTTGTTTAATTAATCTGTTACATATTCTTGTTGTGTGATAAAACACTCTTTTGAAATTTGCCTGTGAGGATGCTCTAGGAATCAAGGATTATATTAACTCCCTGAAAACGAAGCTTCAGAAGTTTGTGTTAATCAATCTCTTTCGTACTCTTGTTGAATCTGTTTGAATGCAAACCAAGAAATTGAGGTTGCTCTAGGGTGTGCATTTTGCTAATTTCTTTTGTTCGTGGCTGTTTTGAATTGTATTTAGTGAAATGGGAATCCTTGCTTGTATTGTATGTATACGTTAACAATTATTATAGATAATTTGTAACCGCCCAAGCCCACGGCTAGATATTGTCCTCTTTGGGCTTTCTCTTTCGGGCTTTCCCTCAAAGTTTTTCCCTCAAAGTTTTTAAAACACATCTGCTAGGGAGAGGTTTCCATACTTAGAAAGAATGTTTCGTTCTCCTCCCCAATCGAGGTGGAATCTCACAATCCACCCCCTTTGGGGCCAGTGTCCTTGTTGGCACACCGTCTCGTGTTCACGCTCCTTGCTGGCACACCGCCCGGTGTCTAGCTCTGATACCATTTGTAACCATCCAAGCCCACCGCTAGCAGATATTGTCCTTTTTTAGCTCTCTTTCGGGCTTCCCCTCAAAGTTTTTAAAACACGTTTTCTAGGGAGAGGTTTCCTTACACTTATAAAGAATGTTTCGTTCTCCTCCCTAACCAATGTGGAATCTCACAATCCACCCCCCTTTGGGACCCAGCGTTCTTGCTAGCACACCGCCTTGTGTCCACCCACCTTGCTGGCACATCGTTCGATGTCTAGCTCTGATACCATTTGTAACCACTCAAGCCTACCGCTAGCAGATATTGTCCTCTTTTGGTTTTCTCTTTCGGGCTTCTCCTTGAGGCCTTTAAAACGCGTCTGCTCCATGGAGGTTTCCACACACTTATAAAAAAAGTTTTGTTCTCCTCTCCAACCGATGTGAGATCTCACAAAATTTCCTTTGTGGTTGATTCAAGTGAGGAAAAGGAAATGGTCAACCATATTTTATCCCGTGCAAAATTAAGCCAATTTTTATTACCTTTTCATTTGAGGGAGGACCCAATAGCCTAGTAACCCTCCTCAATCGACCATTTTGAACTGTTTTATAACCTATGGGCTGGGTAGCAACCAAAATCCATCACTTATCGAAGTGAATTATATGTGTTGTTTCCAAGTGACAATAATATTGTTGGCAACTACAAATAACAGTAACATCTGGGTCACTTTGCTCATTTAAGATTGAAGAATGTCAAAAGGAGATATTGGAGGCAAGAGGGATGATCGAGGAGGCCGAGCGCTCTCTCTCACAAAGCGAGGGTGGAAATGCAAAAAGAGACGAGGAAGATGGAGGAATTGACAGAGATGAAGAGAGATTGGAATCTGTAAAAGCAGCGTCCATATCAGCCATTGTTGGCACACTTGCAGGGCTGCCTATCTTTCTTAATCAAGTGACCAGCATTTCTCAGCTTGCACTCCCTCTTGCAATCACCTTTATTAGCTGTGCCTTGTTTGGAGTTACATTCCGATACACAATAAGGAGAGACTTGGATAATATTCAGCTCAAGACTGGAACATCTGCCGCTTTCGGTTTCGTTAAAGGTATGAAAAATAGCGTCTTGAATAAAGAATTGAGTTATCTAAATCCATTGAGGAAGTATTATTGTTGCTAAATGCAGGTCTTGCAACACTAGATGGTGGAGTACCTCTGGAATTTAATGCTGAGAGTTTCTCATCACACGTCACTGATGCTGCTGTGTATGTATCTGAAAACCTTTATATATTTATTTCTGCTGCTGTTGCACTGGAATTCTGTTTCAAGTTGAGGTTATTAAGCCCTTTTCCTATAAGAAAATCAGTATAAGGGTCGTTTGGATATGAACTTCATCTCAAGAAGATTAAACTTAGTTCATGTTATCCAACTCCCTGGGCCATCGGGCTACAGATAAATGTAACATGTCTTAGAAATCTGATCAGTAAGCGTTGTGTTATTCTTGAAATGTTATGTCACTAATAGCTACTGATTAGATATGAGCTACTAATCAGACACGACTGGTTGAAGAAAGAAGAAAAGAGAAATGAAC

mRNA sequence

CGTCCTCATTGCAGCATAGGAGAGAGCGGATAAGCCAACGAAAGGAAGAAATGTCTGCAACAATCAAGCACTCATTTCTTTCTCCTTCAAATCCAATTCATCTCTCCGCAATCTCTACAAACTTTCTCAAATCACACCCTTCCTCCATGATCATCTCGCACATACCTTTAAGTTTCTCAACACCGCGTCTCAAAATCGTGAAATGTAGCTCGGAATCGAACGATGAAGCTCAAAACAATGTCAATTTGAATAATGCTTTGTCCAGCATGGTCGGTGAGCAGATTGAGGAACTTTTGAACAAGGAAGAGAATAGGAGTTTGCTCGATGGCTTGGAGAAGGCGTCGATGAGAGTTGAAATCGCCAAAAGGCAGTTGGCTGAGATCGAGAAACAGGAACTTGAGCTCAAACGATTCAAGGATCATATTAACCAGCTCGAAAGTAGAGCATCGGAGATTGAAGAATGTCAAAAGGAGATATTGGAGGCAAGAGGGATGATCGAGGAGGCCGAGCGCTCTCTCTCACAAAGCGAGGGTGGAAATGCAAAAAGAGACGAGGAAGATGGAGGAATTGACAGAGATGAAGAGAGATTGGAATCTGTAAAAGCAGCGTCCATATCAGCCATTGTTGGCACACTTGCAGGGCTGCCTATCTTTCTTAATCAAGTGACCAGCATTTCTCAGCTTGCACTCCCTCTTGCAATCACCTTTATTAGCTGTGCCTTGTTTGGAGTTACATTCCGATACACAATAAGGAGAGACTTGGATAATATTCAGCTCAAGACTGGAACATCTGCCGCTTTCGGTTTCGTTAAAGGTCTTGCAACACTAGATGGTGGAGTACCTCTGGAATTTAATGCTGAGAGTTTCTCATCACACGTCACTGATGCTGCTGTGTATGTATCTGAAAACCTTTATATATTTATTTCTGCTGCTGTTGCACTGGAATTCTGTTTCAAGTTGAGGTTATTAAGCCCTTTTCCTATAAGAAAATCAGTATAAGGGTCGTTTGGATATGAACTTCATCTCAAGAAGATTAAACTTAGTTCATGTTATCCAACTCCCTGGGCCATCGGGCTACAGATAAATGTAACATGTCTTAGAAATCTGATCAGTAAGCGTTGTGTTATTCTTGAAATGTTATGTCACTAATAGCTACTGATTAGATATGAGCTACTAATCAGACACGACTGGTTGAAGAAAGAAGAAAAGAGAAATGAAC

Coding sequence (CDS)

ATGTCTGCAACAATCAAGCACTCATTTCTTTCTCCTTCAAATCCAATTCATCTCTCCGCAATCTCTACAAACTTTCTCAAATCACACCCTTCCTCCATGATCATCTCGCACATACCTTTAAGTTTCTCAACACCGCGTCTCAAAATCGTGAAATGTAGCTCGGAATCGAACGATGAAGCTCAAAACAATGTCAATTTGAATAATGCTTTGTCCAGCATGGTCGGTGAGCAGATTGAGGAACTTTTGAACAAGGAAGAGAATAGGAGTTTGCTCGATGGCTTGGAGAAGGCGTCGATGAGAGTTGAAATCGCCAAAAGGCAGTTGGCTGAGATCGAGAAACAGGAACTTGAGCTCAAACGATTCAAGGATCATATTAACCAGCTCGAAAGTAGAGCATCGGAGATTGAAGAATGTCAAAAGGAGATATTGGAGGCAAGAGGGATGATCGAGGAGGCCGAGCGCTCTCTCTCACAAAGCGAGGGTGGAAATGCAAAAAGAGACGAGGAAGATGGAGGAATTGACAGAGATGAAGAGAGATTGGAATCTGTAAAAGCAGCGTCCATATCAGCCATTGTTGGCACACTTGCAGGGCTGCCTATCTTTCTTAATCAAGTGACCAGCATTTCTCAGCTTGCACTCCCTCTTGCAATCACCTTTATTAGCTGTGCCTTGTTTGGAGTTACATTCCGATACACAATAAGGAGAGACTTGGATAATATTCAGCTCAAGACTGGAACATCTGCCGCTTTCGGTTTCGTTAAAGGTCTTGCAACACTAGATGGTGGAGTACCTCTGGAATTTAATGCTGAGAGTTTCTCATCACACGTCACTGATGCTGCTGTGTATGTATCTGAAAACCTTTATATATTTATTTCTGCTGCTGTTGCACTGGAATTCTGTTTCAAGTTGAGGTTATTAAGCCCTTTTCCTATAAGAAAATCAGTATAA

Protein sequence

MSATIKHSFLSPSNPIHLSAISTNFLKSHPSSMIISHIPLSFSTPRLKIVKCSSESNDEAQNNVNLNNALSSMVGEQIEELLNKEENRSLLDGLEKASMRVEIAKRQLAEIEKQELELKRFKDHINQLESRASEIEECQKEILEARGMIEEAERSLSQSEGGNAKRDEEDGGIDRDEERLESVKAASISAIVGTLAGLPIFLNQVTSISQLALPLAITFISCALFGVTFRYTIRRDLDNIQLKTGTSAAFGFVKGLATLDGGVPLEFNAESFSSHVTDAAVYVSENLYIFISAAVALEFCFKLRLLSPFPIRKSV

Homology

[Close]

BLAST of CmaCh16G012270 vs. TrEMBL
Match: E5RDC3_CUCME (Putative uncharacterized protein OS=Cucumis melo subsp. melo PE=4 SV=1)

HSP 1 Score: 503.8 bits (1296), Expect = 1.5e-139
Identity = 273/315 (86.67%), Postives = 292/315 (92.70%), Query Frame = 1


Query: 1   MSATIKHSFLSPSNPIHLSAISTNFLKSHPSSMIISHIPLSFSTPRLKIVKCSSESNDEA 60
           M+ATIKHSFLS SNPIHL  ISTNFLKSHPSS  I H  L FSTPRLKI+KC+SESND+A
Sbjct: 1   MAATIKHSFLSSSNPIHLPPISTNFLKSHPSSTKICHKRLGFSTPRLKILKCTSESNDQA 60

Query: 61  QNNVNLNNALSSMVGEQIEELLNKEENRSLLDGLEKASMRVEIAKRQLAEIEKQELELKR 120
           QN+ NL NALSSMVGEQ+EELLN+EENRSLLDGLEKASMRVEIAK+QLAEIEKQELELKR
Sbjct: 61  QNDFNLKNALSSMVGEQVEELLNREENRSLLDGLEKASMRVEIAKKQLAEIEKQELELKR 120

Query: 121 FKDHINQLESRASEIEECQKEILEARGMIEEAERSLSQSEGGNAKRDEEDGGIDRDEERL 180
           FKD+++QLE+RASEIEECQKEILEARGMIEEAERSL+QSEGGNA RD EDGG+DRDEER 
Sbjct: 121 FKDYVSQLENRASEIEECQKEILEARGMIEEAERSLAQSEGGNAIRDGEDGGLDRDEERF 180

Query: 181 ESVKAASISAIVGTLAGLPIFLNQVTSISQLALPLAITFISCALFGVTFRYTIRRDLDNI 240
           ESVK ASISAIVGTLAGLPIFLNQV S SQL LP AITFISCALFGVTFRYTIRRDLDNI
Sbjct: 181 ESVKVASISAIVGTLAGLPIFLNQVNSTSQLLLPTAITFISCALFGVTFRYTIRRDLDNI 240

Query: 241 QLKTGTSAAFGFVKGLATLDGGVPLEFNAESFSSHVTDAAVYVSENLYIFISAAVALEFC 300
           QLKTGTSAAFGFVKGLATLDGGVPLE +AESFSSHV DAAVYVSENLYIFI AAVAL++C
Sbjct: 241 QLKTGTSAAFGFVKGLATLDGGVPLELSAESFSSHVIDAAVYVSENLYIFICAAVALDYC 300

Query: 301 FKLRLLSPFPIRKSV 316
           FK+ LLSPFPIRKS+
Sbjct: 301 FKMSLLSPFPIRKSI 315

[Close]

BLAST of CmaCh16G012270 vs. TrEMBL
Match: A0A0A0L1N7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G002920 PE=4 SV=1)

HSP 1 Score: 402.9 bits (1034), Expect = 3.6e-109
Identity = 217/243 (89.30%), Postives = 231/243 (95.06%), Query Frame = 1


Query: 73  MVGEQIEELLNKEENRSLLDGLEKASMRVEIAKRQLAEIEKQELELKRFKDHINQLESRA 132
           MVGEQ+EELLN+EENRSLLDGLEKASMRVEIAK+QLAEIEKQELELKRFKD+++QLE+RA
Sbjct: 1   MVGEQVEELLNREENRSLLDGLEKASMRVEIAKKQLAEIEKQELELKRFKDYVSQLENRA 60

Query: 133 SEIEECQKEILEARGMIEEAERSLSQSEGGNAKRDEEDGGIDRDEERLESVKAASISAIV 192
           SEIEECQKEILEARGMIEEAERSL+QSEGGNA RD EDGG+DRDEER ESVKAASISAIV
Sbjct: 61  SEIEECQKEILEARGMIEEAERSLAQSEGGNAIRDGEDGGLDRDEERFESVKAASISAIV 120

Query: 193 GTLAGLPIFLNQVTSISQLALPLAITFISCALFGVTFRYTIRRDLDNIQLKTGTSAAFGF 252
           GTLAGLPIFLNQV S SQL LP AITFISCALFGVTFRYTIRRDLDNIQLKTGT AAFGF
Sbjct: 121 GTLAGLPIFLNQVNSTSQLLLPTAITFISCALFGVTFRYTIRRDLDNIQLKTGTFAAFGF 180

Query: 253 VKGLATLDGGVPLEFNAESFSSHVTDAAVYVSENLYIFISAAVALEFCFKLRLLSPFPIR 312
           VKGLATLDGGVPLE +AESFSSHV DAAVYVSENLYIFI AAVAL++CFK+ LLSPFPIR
Sbjct: 181 VKGLATLDGGVPLELSAESFSSHVIDAAVYVSENLYIFICAAVALDYCFKMSLLSPFPIR 240

Query: 313 KSV 316
           KS+
Sbjct: 241 KSI 243

[Close]

BLAST of CmaCh16G012270 vs. TrEMBL
Match: A5CBE3_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_02s0025g02450 PE=4 SV=1)

HSP 1 Score: 331.6 bits (849), Expect = 1.0e-87
Identity = 200/320 (62.50%), Postives = 240/320 (75.00%), Query Frame = 1


Query: 1   MSATIKHSFLSPSNPIHLSAISTN-FLKSHPSSMIISHIPLSFSTPRLKIVKCSSESNDE 60
           M+ATI  S LS  +P    +I TN F  ++P+     +   + S  R   VKCSSE ++ 
Sbjct: 1   MAATINSSVLSCRSP---RSIPTNIFCVAYPTCTKAFNRASAVS--RAVFVKCSSEESE- 60

Query: 61  AQNNVNLNNALSSMVGEQIEELLNKEENRSLLDGLEKASMRVEIAKRQLAEIEKQELELK 120
              N     ALS MVG+Q+EELLN+EENR LL+GLEKAS RVE A+R+LAEIEKQE+E K
Sbjct: 61  ---NGGFKEALSGMVGKQVEELLNREENRVLLEGLEKASQRVEKARRELAEIEKQEIEAK 120

Query: 121 RFKDHINQLESRASEIEECQKEILEARGMIEEAERSLSQSEGGNAKR----DEEDGGIDR 180
           + +++I QLE R+SEI ECQ+EILEAR  +EEAERSLS + G +  R    + E   I++
Sbjct: 121 QLRNYIEQLEGRSSEIAECQREILEARAKVEEAERSLSINMGEDGDRASFLETESKEINK 180

Query: 181 DEERLESVKAASISAIVGTLAGLPIFLNQVTSISQLALPLAITFISCALFGVTFRYTIRR 240
           +EERLESVKAA +SAIVGT AGLPIFL QVTS SQL LPLAI F+SCALFG+TFRYTIRR
Sbjct: 181 EEERLESVKAALVSAIVGTFAGLPIFLTQVTSSSQLLLPLAINFVSCALFGITFRYTIRR 240

Query: 241 DLDNIQLKTGTSAAFGFVKGLATLDGGVPLEFNAESFSSHVTDAAVYVSENLYIFISAAV 300
           DLDNIQLKTGTSAAFGFVKGLATL GG PLE +A SF SH  D  +YVSENL+IF+ AAV
Sbjct: 241 DLDNIQLKTGTSAAFGFVKGLATLGGGSPLELDAGSFLSHAFDGVLYVSENLFIFVFAAV 300

Query: 301 ALEFCFKLRLLSPFPIRKSV 316
            L+FCFK+R LSPFPI+ SV
Sbjct: 301 GLDFCFKMRFLSPFPIKSSV 311

[Close]

BLAST of CmaCh16G012270 vs. TrEMBL
Match: V4TLD8_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10021179mg PE=4 SV=1)

HSP 1 Score: 328.6 bits (841), Expect = 8.6e-87
Identity = 184/273 (67.40%), Postives = 228/273 (83.52%), Query Frame = 1


Query: 49  IVKCSSESNDEAQ-NNVNLNNALSSMVGEQIEELLNKEENRSLLDGLEKASMRVEIAKRQ 108
           I+KC+S S++E + ++ NL +AL+ MV +++EELLNKEENR+LLDGLEKAS+RVE+AK++
Sbjct: 45  ILKCNSGSSEERETSDGNLKDALTRMVDQRVEELLNKEENRALLDGLEKASLRVEMAKKE 104

Query: 109 LAEIEKQELELKRFKDHINQLESRASEIEECQKEILEARGMIEEAERSLSQSEGGNAKRD 168
           LAEIEKQELE K+ +D++N+LESRA EI ECQ+EI+EAR +++EA RSLSQ+  GN  RD
Sbjct: 105 LAEIEKQELEAKQMRDYVNKLESRAFEIAECQREIVEARAILDEAARSLSQN--GNEFRD 164

Query: 169 E------EDGGIDRDEERLESVKAASISAIVGTLAGLPIFLNQVTSISQLALPLAITFIS 228
           E      E  GI++D ER ES+KAA+ISA+VG+LAGLPI   QVTS SQL LPLA+TFIS
Sbjct: 165 ERNLAEKESEGINKDIERWESIKAAAISALVGSLAGLPISFTQVTSSSQLLLPLAVTFIS 224

Query: 229 CALFGVTFRYTIRRDLDNIQLKTGTSAAFGFVKGLATLDGGVPLEFNAESFSSHVTDAAV 288
           CALFGVT+RYTIRRDLDNIQLKTGTS+AFGFVKGLATL GG PLE N ESF SH  D A+
Sbjct: 225 CALFGVTYRYTIRRDLDNIQLKTGTSSAFGFVKGLATLSGGPPLEPNTESFLSHAFDGAL 284

Query: 289 YVSENLYIFISAAVALEFCFKLRLLSPFPIRKS 315
           YVS+NL IFI AAV L+FCFK ++LSP+P+ KS
Sbjct: 285 YVSQNLLIFIFAAVTLDFCFKTQVLSPYPMNKS 315

[Close]

BLAST of CmaCh16G012270 vs. TrEMBL
Match: W9QL96_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_001700 PE=4 SV=1)

HSP 1 Score: 328.2 bits (840), Expect = 1.1e-86
Identity = 192/317 (60.57%), Postives = 241/317 (76.03%), Query Frame = 1


Query: 1   MSATIKHSFLSPSNPIHLSAISTNFLKSHPSSMIISHIPLSFSTPRLKIVKCSSESNDEA 60
           M++TIK +FL   NP + S  S N L    + +   H    F       VKCS+      
Sbjct: 3   MNSTIKPTFLPCPNPTNNSTFSQNNLFDF-NIIPKCHRAKFFRRASSLAVKCSNNGGLRE 62

Query: 61  QNNVNLNNALSSMVGEQIEELLNKEENRSLLDGLEKASMRVEIAKRQLAEIEKQELELKR 120
           Q+  NL ++L+ +VGEQ++ELLN+EEN++LLDGLE+AS+RVE AKR+LAEIE+QELE  +
Sbjct: 63  QS-FNLKDSLNDVVGEQVQELLNREENKALLDGLERASLRVEKAKRELAEIERQELEANQ 122

Query: 121 FKDHINQLESRASEIEECQKEILEARGMIEEAERSLSQSEGGN--AKRDEEDGGIDRDEE 180
            +++++QLE RASEI ECQKEI EAR M+EEAERSLSQSE G+   K +EE   ID+DEE
Sbjct: 123 MREYVDQLERRASEIAECQKEISEARAMVEEAERSLSQSEEGSYAGKGNEE---IDKDEE 182

Query: 181 RLESVKAASISAIVGTLAGLPIFLNQVTSISQLALPLAITFISCALFGVTFRYTIRRDLD 240
           RLES+KAASISA VGT+AGLPI L QV++ SQL LPLAITF SCALFGVTFRYTIRRDLD
Sbjct: 183 RLESIKAASISAFVGTIAGLPISLTQVSTTSQLILPLAITFASCALFGVTFRYTIRRDLD 242

Query: 241 NIQLKTGTSAAFGFVKGLATLDGGVPLEFNAESFSSHVTDAAVYVSENLYIFISAAVALE 300
           ++ LKTG  AAFG VKGLATL GG PLE N ES SSH  D A++VS++L++F+SAAV L+
Sbjct: 243 DVHLKTGACAAFGVVKGLATLSGGQPLELNTESISSHAFDGAIHVSQDLFLFVSAAVGLD 302

Query: 301 FCFKLRLLSPFPIRKSV 316
           +CFK+ LLSPFPI+ S+
Sbjct: 303 YCFKMGLLSPFPIKTSI 314

[Close]

BLAST of CmaCh16G012270 vs. TAIR10
Match: AT4G24090.1 (AT4G24090.1 unknown protein)

HSP 1 Score: 272.7 bits (696), Expect = 2.8e-73
Identity = 154/262 (58.78%), Postives = 196/262 (74.81%), Query Frame = 1


Query: 50  VKCSSESNDE-AQNNVNLNNALSSMVGEQIEELLNKEENRSLLDGLEKASMRVEIAKRQL 109
           ++ SSE N   + +  +L N+LS +VG Q+EELL++EEN+ LLDGLEKAS+RVEIAKR+L
Sbjct: 44  IRSSSEDNVAISSDGGDLKNSLSGIVGNQVEELLSREENKGLLDGLEKASLRVEIAKREL 103

Query: 110 AEIEKQELELKRFKDHINQLESRASEIEECQKEILEARGMIEEAERSLSQSEGGNAKRDE 169
            +IE+QE+E K  +D+INQLESRA+EI ECQ+EI  AR M+EEAERSLS ++       E
Sbjct: 104 EDIERQEIEAKLLQDYINQLESRAAEIAECQQEIDAARSMVEEAERSLSLADNSTIGSSE 163

Query: 170 EDGGIDRDEERLESVKAASISAIVGTLAGLPIFLNQVTSISQLALPLAITFISCALFGVT 229
           +   ID+D+ERLES KAA I+A VGT+A LP  L+QV S+ QL LPL I F SCALFGVT
Sbjct: 164 KGYSIDKDKERLESAKAAVIAAAVGTIAELPFALSQVASMEQLVLPLGIAFASCALFGVT 223

Query: 230 FRYTIRRDLDNIQLKTGTSAAFGFVKGLATLDGGVPLEFNAESFSSHVTDAAVYVSENLY 289
           FRY +RRDLD+  LK+G  AAFGFVKGL  L  G PLE + ES  SH  D AV VS+++ 
Sbjct: 224 FRYAVRRDLDDNHLKSGAVAAFGFVKGLGMLSRGPPLELSWESLFSHGIDGAVLVSQSVL 283

Query: 290 IFISAAVALEFCFKLRLLSPFP 311
           IF  A++ L+FCFK++LL PFP
Sbjct: 284 IFAFASIGLDFCFKMKLLRPFP 305

[Close]

BLAST of CmaCh16G012270 vs. NCBI nr
Match: gi|659095421|ref|XP_008448570.1| (PREDICTED: uncharacterized protein LOC103490708 [Cucumis melo])

HSP 1 Score: 503.8 bits (1296), Expect = 2.1e-139
Identity = 273/315 (86.67%), Postives = 292/315 (92.70%), Query Frame = 1


Query: 1   MSATIKHSFLSPSNPIHLSAISTNFLKSHPSSMIISHIPLSFSTPRLKIVKCSSESNDEA 60
           M+ATIKHSFLS SNPIHL  ISTNFLKSHPSS  I H  L FSTPRLKI+KC+SESND+A
Sbjct: 1   MAATIKHSFLSSSNPIHLPPISTNFLKSHPSSTKICHKRLGFSTPRLKILKCTSESNDQA 60

Query: 61  QNNVNLNNALSSMVGEQIEELLNKEENRSLLDGLEKASMRVEIAKRQLAEIEKQELELKR 120
           QN+ NL NALSSMVGEQ+EELLN+EENRSLLDGLEKASMRVEIAK+QLAEIEKQELELKR
Sbjct: 61  QNDFNLKNALSSMVGEQVEELLNREENRSLLDGLEKASMRVEIAKKQLAEIEKQELELKR 120

Query: 121 FKDHINQLESRASEIEECQKEILEARGMIEEAERSLSQSEGGNAKRDEEDGGIDRDEERL 180
           FKD+++QLE+RASEIEECQKEILEARGMIEEAERSL+QSEGGNA RD EDGG+DRDEER 
Sbjct: 121 FKDYVSQLENRASEIEECQKEILEARGMIEEAERSLAQSEGGNAIRDGEDGGLDRDEERF 180

Query: 181 ESVKAASISAIVGTLAGLPIFLNQVTSISQLALPLAITFISCALFGVTFRYTIRRDLDNI 240
           ESVK ASISAIVGTLAGLPIFLNQV S SQL LP AITFISCALFGVTFRYTIRRDLDNI
Sbjct: 181 ESVKVASISAIVGTLAGLPIFLNQVNSTSQLLLPTAITFISCALFGVTFRYTIRRDLDNI 240

Query: 241 QLKTGTSAAFGFVKGLATLDGGVPLEFNAESFSSHVTDAAVYVSENLYIFISAAVALEFC 300
           QLKTGTSAAFGFVKGLATLDGGVPLE +AESFSSHV DAAVYVSENLYIFI AAVAL++C
Sbjct: 241 QLKTGTSAAFGFVKGLATLDGGVPLELSAESFSSHVIDAAVYVSENLYIFICAAVALDYC 300

Query: 301 FKLRLLSPFPIRKSV 316
           FK+ LLSPFPIRKS+
Sbjct: 301 FKMSLLSPFPIRKSI 315

[Close]

BLAST of CmaCh16G012270 vs. NCBI nr
Match: gi|449456789|ref|XP_004146131.1| (PREDICTED: uncharacterized protein LOC101213449 [Cucumis sativus])

HSP 1 Score: 494.6 bits (1272), Expect = 1.3e-136
Identity = 270/315 (85.71%), Postives = 290/315 (92.06%), Query Frame = 1


Query: 1   MSATIKHSFLSPSNPIHLSAISTNFLKSHPSSMIISHIPLSFSTPRLKIVKCSSESNDEA 60
           M+ATIK S LS SNPIHL  ISTNFLKSHPSS  I H  L FSTPRLKI+KC+SESND+A
Sbjct: 1   MAATIKLSILSSSNPIHLPPISTNFLKSHPSSTKICHKRLGFSTPRLKILKCTSESNDQA 60

Query: 61  QNNVNLNNALSSMVGEQIEELLNKEENRSLLDGLEKASMRVEIAKRQLAEIEKQELELKR 120
           QN+ +L NALSSMVGEQ+EELLN+EENRSLLDGLEKASMRVEIAK+QLAEIEKQELELKR
Sbjct: 61  QNDFSLKNALSSMVGEQVEELLNREENRSLLDGLEKASMRVEIAKKQLAEIEKQELELKR 120

Query: 121 FKDHINQLESRASEIEECQKEILEARGMIEEAERSLSQSEGGNAKRDEEDGGIDRDEERL 180
           FKD+++QLE+RASEIEECQKEILEARGMIEEAERSL+QSEGGNA RD EDGG+DRDEER 
Sbjct: 121 FKDYVSQLENRASEIEECQKEILEARGMIEEAERSLAQSEGGNAIRDGEDGGLDRDEERF 180

Query: 181 ESVKAASISAIVGTLAGLPIFLNQVTSISQLALPLAITFISCALFGVTFRYTIRRDLDNI 240
           ESVKAASISAIVGTLAGLPIFLNQV S SQL LP AITFISCALFGVTFRYTIRRDLDNI
Sbjct: 181 ESVKAASISAIVGTLAGLPIFLNQVNSTSQLLLPTAITFISCALFGVTFRYTIRRDLDNI 240

Query: 241 QLKTGTSAAFGFVKGLATLDGGVPLEFNAESFSSHVTDAAVYVSENLYIFISAAVALEFC 300
           QLKTGT AAFGFVKGLATLDGGVPLE +AESFSSHV DAAVYVSENLYIFI AAVAL++C
Sbjct: 241 QLKTGTFAAFGFVKGLATLDGGVPLELSAESFSSHVIDAAVYVSENLYIFICAAVALDYC 300

Query: 301 FKLRLLSPFPIRKSV 316
           FK+ LLSPFPIRKS+
Sbjct: 301 FKMSLLSPFPIRKSI 315

[Close]

BLAST of CmaCh16G012270 vs. NCBI nr
Match: gi|700200540|gb|KGN55673.1| (hypothetical protein Csa_3G002920 [Cucumis sativus])

HSP 1 Score: 402.9 bits (1034), Expect = 5.1e-109
Identity = 217/243 (89.30%), Postives = 231/243 (95.06%), Query Frame = 1


Query: 73  MVGEQIEELLNKEENRSLLDGLEKASMRVEIAKRQLAEIEKQELELKRFKDHINQLESRA 132
           MVGEQ+EELLN+EENRSLLDGLEKASMRVEIAK+QLAEIEKQELELKRFKD+++QLE+RA
Sbjct: 1   MVGEQVEELLNREENRSLLDGLEKASMRVEIAKKQLAEIEKQELELKRFKDYVSQLENRA 60

Query: 133 SEIEECQKEILEARGMIEEAERSLSQSEGGNAKRDEEDGGIDRDEERLESVKAASISAIV 192
           SEIEECQKEILEARGMIEEAERSL+QSEGGNA RD EDGG+DRDEER ESVKAASISAIV
Sbjct: 61  SEIEECQKEILEARGMIEEAERSLAQSEGGNAIRDGEDGGLDRDEERFESVKAASISAIV 120

Query: 193 GTLAGLPIFLNQVTSISQLALPLAITFISCALFGVTFRYTIRRDLDNIQLKTGTSAAFGF 252
           GTLAGLPIFLNQV S SQL LP AITFISCALFGVTFRYTIRRDLDNIQLKTGT AAFGF
Sbjct: 121 GTLAGLPIFLNQVNSTSQLLLPTAITFISCALFGVTFRYTIRRDLDNIQLKTGTFAAFGF 180

Query: 253 VKGLATLDGGVPLEFNAESFSSHVTDAAVYVSENLYIFISAAVALEFCFKLRLLSPFPIR 312
           VKGLATLDGGVPLE +AESFSSHV DAAVYVSENLYIFI AAVAL++CFK+ LLSPFPIR
Sbjct: 181 VKGLATLDGGVPLELSAESFSSHVIDAAVYVSENLYIFICAAVALDYCFKMSLLSPFPIR 240

Query: 313 KSV 316
           KS+
Sbjct: 241 KSI 243

[Close]

BLAST of CmaCh16G012270 vs. NCBI nr
Match: gi|568844870|ref|XP_006476303.1| (PREDICTED: uncharacterized protein LOC102612869 [Citrus sinensis])

HSP 1 Score: 335.1 bits (858), Expect = 1.3e-88
Identity = 186/273 (68.13%), Postives = 230/273 (84.25%), Query Frame = 1


Query: 49  IVKCSSESNDEAQ-NNVNLNNALSSMVGEQIEELLNKEENRSLLDGLEKASMRVEIAKRQ 108
           I+KC+S S++E + ++ NL +AL+ MV +++EELLNKEENR+LLDGLEKAS+RVE+AK++
Sbjct: 45  ILKCNSGSSEERETSDGNLKDALTGMVDQRVEELLNKEENRALLDGLEKASLRVEMAKKE 104

Query: 109 LAEIEKQELELKRFKDHINQLESRASEIEECQKEILEARGMIEEAERSLSQSEGGNAKRD 168
           LAEIEKQELE K+ +D++N+LESRA EI ECQ+EI++AR +++EAERSLSQ+  GN  RD
Sbjct: 105 LAEIEKQELEAKQMRDYVNKLESRAFEIAECQREIVDARAILDEAERSLSQN--GNEFRD 164

Query: 169 E------EDGGIDRDEERLESVKAASISAIVGTLAGLPIFLNQVTSISQLALPLAITFIS 228
           E      E  GI++D ER ES+KAA+ISA+VG+LAGLPI   QVTS SQL LPLA+TFIS
Sbjct: 165 ERSLAEKESEGINKDIERWESIKAAAISALVGSLAGLPISFTQVTSSSQLLLPLAVTFIS 224

Query: 229 CALFGVTFRYTIRRDLDNIQLKTGTSAAFGFVKGLATLDGGVPLEFNAESFSSHVTDAAV 288
           CALFGVTFRYTIRRDLDNIQLKTGTS+AFGFVKGLATL GG PLE N ESF SH  D A+
Sbjct: 225 CALFGVTFRYTIRRDLDNIQLKTGTSSAFGFVKGLATLSGGPPLELNTESFLSHAFDGAL 284

Query: 289 YVSENLYIFISAAVALEFCFKLRLLSPFPIRKS 315
           YVS+NL IFI AAV L+FCFK R+LSP+P++KS
Sbjct: 285 YVSQNLLIFIFAAVTLDFCFKTRVLSPYPMKKS 315

[Close]

BLAST of CmaCh16G012270 vs. NCBI nr
Match: gi|719971169|ref|XP_010273359.1| (PREDICTED: uncharacterized protein LOC104608927 [Nelumbo nucifera])

HSP 1 Score: 332.0 bits (850), Expect = 1.1e-87
Identity = 190/291 (65.29%), Postives = 234/291 (80.41%), Query Frame = 1


Query: 29  HPSSMIISHIPLSFSTPRLKIVKCSSESNDEAQNNVNLNNALSSMVGEQIEELLNKEENR 88
           +P+S+ IS+   S S  R+ +VKCSSE   E     NL NALS MV +++EELLN+EENR
Sbjct: 27  YPTSVRISNRISSLS--RILLVKCSSEERTEG----NLKNALSGMVDKRVEELLNREENR 86

Query: 89  SLLDGLEKASMRVEIAKRQLAEIEKQELELKRFKDHINQLESRASEIEECQKEILEARGM 148
           +LLD L+KAS RVE+A+++LAEIE+Q++E  + +D++NQLESRASEI ECQKEILEA+ M
Sbjct: 87  ALLDDLDKASQRVEMARKELAEIERQQIEAAQLRDYVNQLESRASEIAECQKEILEAKAM 146

Query: 149 IEEAERSLSQS----EGGNAKRDEEDGGIDRDEERLESVKAASISAIVGTLAGLPIFLNQ 208
           +EEAERSLS +    E     +D+++ GID+ EER ES+KAASISAIVGT+AGLPI ++Q
Sbjct: 147 VEEAERSLSINMNDLESAVNFKDKKNEGIDKGEERWESIKAASISAIVGTIAGLPISVSQ 206

Query: 209 VTSISQLALPLAITFISCALFGVTFRYTIRRDLDNIQLKTGTSAAFGFVKGLATLDGGVP 268
           V+S +QL LPLAITFISC+LFGVTFRYTIRRDLDNIQLKTGTSAAF FVKGL  L  G P
Sbjct: 207 VSSSAQLILPLAITFISCSLFGVTFRYTIRRDLDNIQLKTGTSAAFSFVKGLGALGAGPP 266

Query: 269 LEFNAESFSSHVTDAAVYVSENLYIFISAAVALEFCFKLRLLSPFPIRKSV 316
           LE +  SF SH  D AVYVSENL+IF  +AVAL+FCFK+RLLSPFPI+KSV
Sbjct: 267 LELDIGSFLSHAVDGAVYVSENLFIFAFSAVALDFCFKMRLLSPFPIKKSV 311

The following BLAST results are available for this feature:

BLAST of CmaCh16G012270 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CmaCh16G012270 vs. TrEMBL


Match Name	E-value	Identity	Description
E5RDC3_CUCME	1.5e-139	86.67	Putative uncharacterized protein OS=Cucumis melo subsp. melo PE=4 SV=1	[more]
A0A0A0L1N7_CUCSA	3.6e-109	89.30	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G002920 PE=4 SV=1	[more]
A5CBE3_VITVI	1.0e-87	62.50	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_02s0025g02450 PE=4 SV=...	[more]
V4TLD8_9ROSI	8.6e-87	67.40	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10021179mg PE=4 SV=1	[more]
W9QL96_9ROSA	1.1e-86	60.57	Uncharacterized protein OS=Morus notabilis GN=L484_001700 PE=4 SV=1	[more]

BLAST of CmaCh16G012270 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G24090.1	2.8e-73	58.78	unknown protein	[more]

BLAST of CmaCh16G012270 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659095421\|ref\|XP_008448570.1\|	2.1e-139	86.67	PREDICTED: uncharacterized protein LOC103490708 [Cucumis melo]	[more]
gi\|449456789\|ref\|XP_004146131.1\|	1.3e-136	85.71	PREDICTED: uncharacterized protein LOC101213449 [Cucumis sativus]	[more]
gi\|700200540\|gb\|KGN55673.1\|	5.1e-109	89.30	hypothetical protein Csa_3G002920 [Cucumis sativus]	[more]
gi\|568844870\|ref\|XP_006476303.1\|	1.3e-88	68.13	PREDICTED: uncharacterized protein LOC102612869 [Citrus sinensis]	[more]
gi\|719971169\|ref\|XP_010273359.1\|	1.1e-87	65.29	PREDICTED: uncharacterized protein LOC104608927 [Nelumbo nucifera]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0030154	cell differentiation
biological_process	GO:0009965	leaf morphogenesis
biological_process	GO:0016556	mRNA modification
biological_process	GO:0009987	cellular process
biological_process	GO:0044767	single-organism developmental process
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh16G012270.1	CmaCh16G012270.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	unknown	Coil	Coil	coord: 94..155 scor
None	No IPR available	PANTHER	PTHR36383	FAMILY NOT NAMED	coord: 1..315 score: 3.0
None	No IPR available	PANTHER	PTHR36383:SF1	SUBFAMILY NOT NAMED	coord: 1..315 score: 3.0

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh16G012270	Cucsa.322510	Cucumber (Gy14) v1	cgycmaB0887
CmaCh16G012270	Cla008884	Watermelon (97103) v1	cmawmB292
CmaCh16G012270	Csa3G002920	Cucumber (Chinese Long) v2	cmacuB326
CmaCh16G012270	MELO3C013778	Melon (DHL92) v3.5.1	cmameB291
CmaCh16G012270	ClCG10G000840	Watermelon (Charleston Gray)	cmawcgB284
CmaCh16G012270	CSPI03G00860	Wild cucumber (PI 183967)	cmacpiB332
CmaCh16G012270	Lsi07G011140	Bottle gourd (USVL1VR-Ls)	cmalsiB324
CmaCh16G012270	Cp4.1LG14g10010	Cucurbita pepo (Zucchini)	cmacpeB345
CmaCh16G012270	MELO3C013778.2	Melon (DHL92) v3.6.1	cmamedB342
CmaCh16G012270	CsaV3_3G000910	Cucumber (Chinese Long) v3	cmacucB0380
CmaCh16G012270	Cla97C10G185440	Watermelon (97103) v2	cmawmbB337
CmaCh16G012270	BhiUN179G18	Wax gourd	cmawgoB0450
CmaCh16G012270	CsGy3G000810	Cucumber (Gy14) v2	cgybcmaB339
CmaCh16G012270	Carg19486	Silver-seed gourd	carcmaB0596

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh16G012270	Silver-seed gourd	carcmaB0956
CmaCh16G012270	Cucurbita maxima (Rimu)	cmacmaB357
CmaCh16G012270	Cucurbita moschata (Rifu)	cmacmoB323
CmaCh16G012270	Cucurbita moschata (Rifu)	cmacmoB344
CmaCh16G012270	Cucurbita pepo (Zucchini)	cmacpeB363