CmaCh16G011150 (gene) Cucurbita maxima (Rimu)
The following sequences are available for this feature:
Legend: exonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCTTCTGTGGACCAAAGCCCTTCAGCTAAGCGTTGGCTTCCTCTCGAAGCTAACCCTGATGTTATGAACCAGGTATAGGTACTTCCGTTCTGTTCTGATTTGGCTTCTAGATTCGAGCTCTGGTTAGTGGAAAGAGGATTCGAAGGGCGATTCTCAACTTTTCTTGGGATGGGATGTATTTCAATGTCTCCGCATTTTCTTGGTGTATCTATACGGTTTTCGTGCCTGTTTGTTCATTCTATTTCTTATTGCTGATTTGTGTGAGCGATCTGTATTTTGTTGAAGTGAGAGAGAAATCTGAGAGGAGATAATGAGAATTTCTTTCAAATTTTTTTTGTTATCATTTTGATTTGGTCCTCCGGATTAATGATTTTGCACTCTTTGGGGCTTTCTCGTTCAGTCCAAATCGCCTATTTGACTAACTGGGATGTTTTTATGCGTGCTGTATACTCTGTTAGCCAGTTGAATTTCTTAGTTTATCTTGATAAGGATGGTGTGCCCATGTTATTGGAATCACGGCTTACTTTTGAAGTGATCGTTTTCTTTTCCTTCCCTTTCATTCAAATAATGTTTCGCTATATATATATATATATATATATAACCCAATTGCTGCTTGATTTTAGAAGATAATAGCATCATCAAGTTTCCATATATCCTCTAATGTTCGACAAACTTCTGTTTTGTTATTCCAAAGTTCCTTTGGGGTCTTGGTCTTCCAGAAGATGAAGCAGAGTGCAATGATGTTTATGGCTTGGATGAAGAACTCTTGGACATGGTGCCTAAGCCTGTACTGGCGGTGGTGTTTCTTTATCCCATAACTCAAAAGGTTTGCTTACAGATAAAGTTCAGTTGTAATGATGTTTATAAGTTTGAAGAATTCCCTCGACATAAAACGAAGAAAATAGTTTTTCATTTTCTAAATGTTTTAATGTTTTCAGTGTAAAGACGAGAGGCTGCAACAGGAAGAAGATGCAAAGAATGTGAGTATGAGAATTGACAAGTTAAGCAAGTGTTTTCAGTCCTCTTTATATTATGACATACCAATAGACTGAACTGTTTAGATACGTTTCCCTTCTAGATTAGGATGTTACTTGGTGTTTGTCTAATGTATGTTCGGTCTGCGTGACTTGTTTAAGATTTTCCATCTGCAAATCAGGAAAAACGTTTTTCCGTCTGTCGTAAATTGTTTAAAATTCTGTCTGGTTGCATACTCTAGCATGGACAATCCAGTTTTGGTGCATGTTATTGGGTCATTTTTAATAACATTGTTAAAATGTTTCATATCCGTGCAAGTGTTATCTAATAAGGCTCTTTGTTTCTGTTGTGATCCTAGGATTATAGTGATCGAGTATACTTTATGAAACAAACTGTTGGCAATGCCTGTGGAACTATTGGACTTCTTCATGCCATAGGGAACATTACTTCCGAGATTAAGCTTTGTAAGTACTGAGAGATGCTAGTCAATTTGACGCTCTGAAATATATTTCTTCGAATCATGTAGCATTGTGATCCTCTACCTTTTGCTCAGGGGCCTTCGTATTGTATCTGTTCTCCTCTTATATGCACATGTAGAGTAGAGAATTGGTCATTTAAGGAGTTATGAAAGCTATCTTTCATTGAAAATAAGCAGAAACACGAATTAAATATGAAAGTGAAACGAAGAATTATTCTGCAGGGTCATTCATATGTTTAATTTCGTGATCGTGTTCTGGTTTACCATGGAGGTTTAAGTATCCGAATTGAGTCCTGTGGCTGGTCACAATCATTCTACTATAATCACGTTGATCAAGTTTATCAGTGTCTTTACTTGTCTGCTTGTTCTGGTGATTCCTGAGTGATTACTGCACTGCTGTTATGATATTCTTTCAGTTCTAGTACATCTTATTTTTCTTTTCTTTTTTCTTTTTTCTTTTTTTAACTTCTGTGCTTTGTCTTTTTTTTAAGCCGAGGGATCGTTCTTGGATAGGTTCTTCAAGTCTACCAAAAGCATGGATCCGATGGAGGTTGTATTTATAAACACATGCTTCTCTTACACACCCCGTCTATTTCCCCACCCCACCACCACCCAAAAATTTTCGTATACAGAAAAGGACGAACATATCAAGAAACGCAAGGAATAAAATAAATTATTTATCAATCCTTTCCTTTGTCCAGTTGATGCTTACCCAAAATATTTTTCCTTTTGCTTCTAATAGTCGTATGTTGTTCACTTTGATAGCGTGCAGTATTTCTTGGGGAAGACAGAGAAATGGAAGTTGCACATTCAGTAGCAGCAAATGCTGGTGATACGACGGTAAGTATCGTTTCAAGTTTTCTGAATAATGGTGGAGTATATTTAGAATAAATAGATACCTTATCGAGGCTGCGTTCAGCATGTAAGAGTGAACCTTCAGCCATTGTCTTGTTTTTTCAGATAAAGCTTTGACAGGCTGACAGCTATCCTCTGGTGATAGGAATTTCTTTCAGTTACCTCCACAGCAAATCAGAGAATTTAATAATTAAATTGTAGATGATCAGTGAAAATGGATGATTTTTGAAAGTTCAAGATCTAACGACAGAGTTGGTTGTATAATAGAGGAAAAAGTAGATAAGAGATTGTATGAACATAAAATGCATTCACTGGAACAGATGCTCGTTATTTCTCCCTGTATATGAATACACGTATACGTGCTGACTTATCTTTTCTTATTTGGCTCATCTTTTCTTCTCATTACGTACAGGCTCCAGAAAAGGTCGATACTCACTTTATCTGCTTCTCATGTGTGGACGGTAAACACTTCTTAGAGCTCTCTCTCTCTCTCTCTCTCTCTCTCCAAGGAAAAAAATATTTTCTTTGGAGTCTACAATGAATTGGGTCATCAGATTTTTAAGAAATGATCTAATCTACAGTATCCTAATTATACAGGTGTACTTTATGAGCTCGATGGGATGAAGTCGATGCCAATATCACACGGTGCATCATCACCGGACACTCTATTACAGGTAAATAATTGCTCTGAATGTTATCCTGGTTTGTTTTAACCAGTTATGTTTATTGTCCTGTTTGAATCACCTTGCATGTTTATCTCGATTCGCCAATGAATCATACACAACAAAATATTACACTTCTGTTCTCTGCATTTAATGAAATGATTGATGAAATCACAGGATACAGCCAAAGTCATAAAAGACATAATCTCGAAAAATCCCGACTCGCTGAGATTCAATGTCATTGCCATTTCAAAGAAAGTCGGGGATGCATCTTAAGGCGACCAGGTTTGATCTGATTTAGTCTTTGCATCAATGAACAAGTCCTATGCGTAATTATCGCTTTACGTAGATGCATCTATGAGAAGTCTGTTGAGATGAAGGAAGTGTTTAATATTTGCATCAAACTGTGTTTTGTGTGGTTTCAGAATTTGCTAATGACTAGAGAAGTTGTTCATTGCTTTGGTATGCAAGGTGATATTGATTGAGTCTAAAATTAGTATTAAGTTCTGAGTCTGAATATTAGGAGTTAGGTTTTGACCTTTGAGGTTTTGAAAATTAGTATTTTGCTTTCTTGGAATACAAATCTTATGAAAACATCCGTAGATGACTTTTTGAGATCATAGCTCAAATTTGAATGGTTAGTTTCAAGCTTCTCATTTTCATAGATTCGTAACATTTTTGTCTTTTTGAGTTGAGATGTCTACTTTACCCGTG ATGGCTTCTGTGGACCAAAGCCCTTCAGCTAAGCGTTGGCTTCCTCTCGAAGCTAACCCTGATGTTATGAACCAGTTCCTTTGGGGTCTTGGTCTTCCAGAAGATGAAGCAGAGTGCAATGATGTTTATGGCTTGGATGAAGAACTCTTGGACATGGTGCCTAAGCCTGTACTGGCGGTGGTGTTTCTTTATCCCATAACTCAAAAGTGTAAAGACGAGAGGCTGCAACAGGAAGAAGATGCAAAGAATGATTATAGTGATCGAGTATACTTTATGAAACAAACTGTTGGCAATGCCTGTGGAACTATTGGACTTCTTCATGCCATAGGGAACATTACTTCCGAGATTAAGCTTTCCGAGGGATCGTTCTTGGATAGGTTCTTCAAGTCTACCAAAAGCATGGATCCGATGGAGCGTGCAGTATTTCTTGGGGAAGACAGAGAAATGGAAGTTGCACATTCAGTAGCAGCAAATGCTGGTGATACGACGGCTCCAGAAAAGGTCGATACTCACTTTATCTGCTTCTCATGTGTGGACGGTGTACTTTATGAGCTCGATGGGATGAAGTCGATGCCAATATCACACGGTGCATCATCACCGGACACTCTATTACAGGATACAGCCAAAGTCATAAAAGACATAATCTCGAAAAATCCCGACTCGCTGAGATTCAATGTCATTGCCATTTCAAAGAAAGTCGGGGATGCATCTTAAGGCGACCAGGTTTGATCTGATTTAGTCTTTGCATCAATGAACAAGTCCTATGCGTAATTATCGCTTTACGTAGATGCATCTATGAGAAGTCTGTTGAGATGAAGGAAGTGTTTAATATTTGCATCAAACTGTGTTTTGTGTGGTTTCAGAATTTGCTAATGACTAGAGAAGTTGTTCATTGCTTTGGTATGCAAGGTGATATTGATTGAGTCTAAAATTAGTATTAAGTTCTGAGTCTGAATATTAGGAGTTAGGTTTTGACCTTTGAGGTTTTGAAAATTAGTATTTTGCTTTCTTGGAATACAAATCTTATGAAAACATCCGTAGATGACTTTTTGAGATCATAGCTCAAATTTGAATGGTTAGTTTCAAGCTTCTCATTTTCATAGATTCGTAACATTTTTGTCTTTTTGAGTTGAGATGTCTACTTTACCCGTG ATGGCTTCTGTGGACCAAAGCCCTTCAGCTAAGCGTTGGCTTCCTCTCGAAGCTAACCCTGATGTTATGAACCAGTTCCTTTGGGGTCTTGGTCTTCCAGAAGATGAAGCAGAGTGCAATGATGTTTATGGCTTGGATGAAGAACTCTTGGACATGGTGCCTAAGCCTGTACTGGCGGTGGTGTTTCTTTATCCCATAACTCAAAAGTGTAAAGACGAGAGGCTGCAACAGGAAGAAGATGCAAAGAATGATTATAGTGATCGAGTATACTTTATGAAACAAACTGTTGGCAATGCCTGTGGAACTATTGGACTTCTTCATGCCATAGGGAACATTACTTCCGAGATTAAGCTTTCCGAGGGATCGTTCTTGGATAGGTTCTTCAAGTCTACCAAAAGCATGGATCCGATGGAGCGTGCAGTATTTCTTGGGGAAGACAGAGAAATGGAAGTTGCACATTCAGTAGCAGCAAATGCTGGTGATACGACGGCTCCAGAAAAGGTCGATACTCACTTTATCTGCTTCTCATGTGTGGACGGTGTACTTTATGAGCTCGATGGGATGAAGTCGATGCCAATATCACACGGTGCATCATCACCGGACACTCTATTACAGGATACAGCCAAAGTCATAAAAGACATAATCTCGAAAAATCCCGACTCGCTGAGATTCAATGTCATTGCCATTTCAAAGAAAGTCGGGGATGCATCTTAA MASVDQSPSAKRWLPLEANPDVMNQFLWGLGLPEDEAECNDVYGLDEELLDMVPKPVLAVVFLYPITQKCKDERLQQEEDAKNDYSDRVYFMKQTVGNACGTIGLLHAIGNITSEIKLSEGSFLDRFFKSTKSMDPMERAVFLGEDREMEVAHSVAANAGDTTAPEKVDTHFICFSCVDGVLYELDGMKSMPISHGASSPDTLLQDTAKVIKDIISKNPDSLRFNVIAISKKVGDAS
BLAST of CmaCh16G011150 vs. Swiss-Prot
Match: UCH3_ARATH (Ubiquitin carboxyl-terminal hydrolase 3 OS=Arabidopsis thaliana GN=UCH3 PE=2 SV=1) HSP 1 Score: 348.6 bits (893), Expect = 5.4e-95 Identity = 170/233 (72.96%), Postives = 199/233 (85.41%), Query Frame = 1
BLAST of CmaCh16G011150 vs. Swiss-Prot
Match: UCHL3_BOVIN (Ubiquitin carboxyl-terminal hydrolase isozyme L3 OS=Bos taurus GN=UCHL3 PE=2 SV=1) HSP 1 Score: 218.0 bits (554), Expect = 1.1e-55 Identity = 116/226 (51.33%), Postives = 149/226 (65.93%), Query Frame = 1
BLAST of CmaCh16G011150 vs. Swiss-Prot
Match: UCHL3_HUMAN (Ubiquitin carboxyl-terminal hydrolase isozyme L3 OS=Homo sapiens GN=UCHL3 PE=1 SV=1) HSP 1 Score: 217.6 bits (553), Expect = 1.4e-55 Identity = 116/226 (51.33%), Postives = 149/226 (65.93%), Query Frame = 1
BLAST of CmaCh16G011150 vs. Swiss-Prot
Match: UCHL3_MOUSE (Ubiquitin carboxyl-terminal hydrolase isozyme L3 OS=Mus musculus GN=Uchl3 PE=1 SV=2) HSP 1 Score: 217.6 bits (553), Expect = 1.4e-55 Identity = 116/226 (51.33%), Postives = 149/226 (65.93%), Query Frame = 1
BLAST of CmaCh16G011150 vs. Swiss-Prot
Match: UCHL3_PIG (Ubiquitin carboxyl-terminal hydrolase isozyme L3 OS=Sus scrofa GN=UCHL3 PE=2 SV=1) HSP 1 Score: 217.2 bits (552), Expect = 1.9e-55 Identity = 116/226 (51.33%), Postives = 150/226 (66.37%), Query Frame = 1
BLAST of CmaCh16G011150 vs. TrEMBL
Match: A0A0A0L5F5_CUCSA (Ubiquitin carboxyl-terminal hydrolase OS=Cucumis sativus GN=Csa_3G017310 PE=3 SV=1) HSP 1 Score: 393.7 bits (1010), Expect = 1.6e-106 Identity = 190/228 (83.33%), Postives = 210/228 (92.11%), Query Frame = 1
BLAST of CmaCh16G011150 vs. TrEMBL
Match: I1MV54_SOYBN (Ubiquitin carboxyl-terminal hydrolase OS=Glycine max GN=GLYMA_17G145500 PE=3 SV=1) HSP 1 Score: 377.9 bits (969), Expect = 9.3e-102 Identity = 185/235 (78.72%), Postives = 205/235 (87.23%), Query Frame = 1
BLAST of CmaCh16G011150 vs. TrEMBL
Match: C6TJP0_SOYBN (Ubiquitin carboxyl-terminal hydrolase OS=Glycine max PE=2 SV=1) HSP 1 Score: 377.5 bits (968), Expect = 1.2e-101 Identity = 185/235 (78.72%), Postives = 205/235 (87.23%), Query Frame = 1
BLAST of CmaCh16G011150 vs. TrEMBL
Match: A0A0S3R5G4_PHAAN (Ubiquitin carboxyl-terminal hydrolase OS=Vigna angularis var. angularis GN=Vigan.01G373400 PE=3 SV=1) HSP 1 Score: 376.7 bits (966), Expect = 2.1e-101 Identity = 184/235 (78.30%), Postives = 205/235 (87.23%), Query Frame = 1
BLAST of CmaCh16G011150 vs. TrEMBL
Match: C6T574_SOYBN (Ubiquitin carboxyl-terminal hydrolase (Fragment) OS=Glycine max GN=GLYMA_05G063800 PE=2 SV=1) HSP 1 Score: 375.2 bits (962), Expect = 6.0e-101 Identity = 184/235 (78.30%), Postives = 205/235 (87.23%), Query Frame = 1
BLAST of CmaCh16G011150 vs. TAIR10
Match: AT4G17510.1 (AT4G17510.1 ubiquitin C-terminal hydrolase 3) HSP 1 Score: 348.6 bits (893), Expect = 3.0e-96 Identity = 170/233 (72.96%), Postives = 199/233 (85.41%), Query Frame = 1
BLAST of CmaCh16G011150 vs. TAIR10
Match: AT5G16310.1 (AT5G16310.1 Peptidase C12, ubiquitin carboxyl-terminal hydrolase 1) HSP 1 Score: 80.1 bits (196), Expect = 2.0e-15 Identity = 61/237 (25.74%), Postives = 113/237 (47.68%), Query Frame = 1
BLAST of CmaCh16G011150 vs. TAIR10
Match: AT1G65650.1 (AT1G65650.1 Peptidase C12, ubiquitin carboxyl-terminal hydrolase 1) HSP 1 Score: 79.3 bits (194), Expect = 3.4e-15 Identity = 68/235 (28.94%), Postives = 112/235 (47.66%), Query Frame = 1
BLAST of CmaCh16G011150 vs. NCBI nr
Match: gi|659095862|ref|XP_008448803.1| (PREDICTED: ubiquitin carboxyl-terminal hydrolase isozyme L3 [Cucumis melo]) HSP 1 Score: 399.8 bits (1026), Expect = 3.3e-108 Identity = 194/233 (83.26%), Postives = 211/233 (90.56%), Query Frame = 1
BLAST of CmaCh16G011150 vs. NCBI nr
Match: gi|778675289|ref|XP_011650383.1| (PREDICTED: ubiquitin carboxyl-terminal hydrolase isozyme L3 [Cucumis sativus]) HSP 1 Score: 393.7 bits (1010), Expect = 2.3e-106 Identity = 190/228 (83.33%), Postives = 210/228 (92.11%), Query Frame = 1
BLAST of CmaCh16G011150 vs. NCBI nr
Match: gi|700200704|gb|KGN55837.1| (hypothetical protein Csa_3G017310 [Cucumis sativus]) HSP 1 Score: 393.7 bits (1010), Expect = 2.3e-106 Identity = 190/228 (83.33%), Postives = 210/228 (92.11%), Query Frame = 1
BLAST of CmaCh16G011150 vs. NCBI nr
Match: gi|729338418|ref|XP_010539201.1| (PREDICTED: uncharacterized protein LOC104813337 [Tarenaya hassleriana]) HSP 1 Score: 380.6 bits (976), Expect = 2.1e-102 Identity = 184/238 (77.31%), Postives = 213/238 (89.50%), Query Frame = 1
BLAST of CmaCh16G011150 vs. NCBI nr
Match: gi|947054740|gb|KRH04193.1| (hypothetical protein GLYMA_17G145500 [Glycine max]) HSP 1 Score: 377.9 bits (969), Expect = 1.3e-101 Identity = 185/235 (78.72%), Postives = 205/235 (87.23%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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