CmaCh16G009320 (gene) Cucurbita maxima (Rimu)

Overview
NameCmaCh16G009320
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu))
DescriptionPectin lyase-like superfamily protein, putative
LocationCma_Chr16 : 7121109 .. 7131972 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTTGCTGGTTTGTATAGGCATTAAGTACCCATGGAGCCACGCTTGTGCATGTGATGGAGGTGGTGTGGTTTTAGTACCAGACAGGAGTTTTCTGATTCTTCCGTTGGTGCTTAAAGGTCCATGCAAAGGATCCATTGGTCTGCGGATTAATGGCGAATTGTTGGCTCCTATCGACCAATATTTCGCCACTGGCCAAACTTGGCTGAGTATCTATGAAGTTGAAAACTTTTTTGTCGACGCTTATGGCAGCTTGAACGCCCGCGGTTCTTCAGCTTGGCCTTTCAAAACTTCTAACCGTCCAATTGCAAGTCCTTTTTTTCGATTCTTTGGTTAAAGTGTTGGAACAAGAATTCACTTTCTGTTTTCTTCTTTTTAAGTTATTTGTTTAGTGACCGTGAAAATTTTTGTGTAGTCTATGAAACTCACTAAAATCAACAGACTACACTAAAATCAACAATGCAAGAATTAGGAGTATAACATCGTACAATAGCAAATACTTCCATTTTAGTGTGCATAGATGTCAATAATGTCACGTTTGATGACATTAGAGCAATGGCTCCAGAAGATAGCCCCAACACAACACAGATGGAATCCACATTTCCAAGTCAAGTGGTATCAACTTTATGCAGTCAAGATTCGACACTGGAGACTTGTATCTCTTTGGACCCTGGAAGTAGATTCATCAACATAACAAACATCCATCGTGATCCAGACCACGGAATTAGCATCGGTAGTCTTGGAAAATACCCAAATGAAGAAAATGTCTTTAAAGTCATAGTAAGAGACTCCCATTTGTTGGCACAGACAATGGAGTGAGGATCAAAACTTCCACATTTGAAAATGCCATTCTGTCCAGAATCAAAACTTCCACCGTGGCCTTATGTAAAATAATTCTAACGAATCTAAAAAATCAGCGGTTGGATTTCCTCCAGAATTGAACACAATCTAGAACGTTCATAGATCACTACATTTAACGATCAGAATTCAAATTGGAAGTCACTAGCTTGTTAATCAGGATGAATACTTTTGACAGATTGTCCAGAAAATTCAATCTTTAAATCACGAAGATTTTGAAGCTTTCAACATCGGTTTAAGCTTCCCTTATAAAGTGTCAAGTTGGGGCATTAGTATGGAACAAGAATCGAGCTCCCAATCACAAGTAATAGCCGTTTAGATTTTGGATCTCCTAGTCTCGAGTTGAATTGAGACTAGGAGATCCAAAATTCTCCATCATTTCCCTTCAAACTTGTTCCTACATTTTCTAAGCAAGATTACCCACATGTTCTTTGAAGGAATTGAGTGGTAAAAGTGCCTAAAACCATTCCCCTAATCCAATCCGCCATTGAAGAACTTAAAAATAAGTTTGAAAATCTCATATGAGCTTACACGCAAATTCTTTAAGCAAGGAGTCTTGCCACAGAAGAGCACGAAGAGAAATAACCTCATACAAGTGCTCAATTGAAGGAAATAAGTTTTGGGCTCAAATTGGGGGTAAGTGTTGAATTCCTATCTACGGTCCCTTTTCTTTCGAATAGAGCATTCCTTCCACTTCAAAGGATGAAGTTGAGAAACTTTGATGAAGAAATCGAGAGCTGAAACGTTGTAGAATGAGATGCCTAAGTGATAATGTTTGCATAATCCACCACACCTAAATGGTGTATCTTATTTATAATCAAATAAATGACAAGGATATGGAAAGACTAATAAACGGGGTATGTAAGAAGACAAATATCTAGATAGTTGACTTATAATAAAATATCAAATATGATATATATGATAAACTATAATTTAGCACTAAATATCCTTAACACCCCAACAAGCTGAGCGTCAGATTTCAACGAACGTGAAATTTGAATCTGAAAAATTCAAAGAGAGGTCGAGAAACACCTTTCGTGAAGATGTCGAAGAGAAACACTTTCTTGACCATCGAAAACTATAGACGGATCGTTGCTCAGCGATGATGCTGCCTTGGCTTCGGTGAGAATATGTCTAACCCATGAAGAGGGATCGTCGCTCAGCGACGATGCTGCCTTAACTCCAGTGAGAATATGTCAACCCAAGAAGTAGAAGGGGAAACCTAGAGCAAGGAACAAAGACAATGTTGAAGCCGGTAGAGTCGCCACAGTGGACGAAGAAGCCAATTTTGGCGAGAAGAAAGGCGGCGACTTGGTTGGCGAAGAGGCCAGTGCAATGCCTAGATTCCAAAGGTAAATCTCTGCAGAAGGTCGATAAGTTTAGGTTAGGGTTTATGTGAAAGATGAAGGGAAGAATGGGAGAATGAGAGAGACTATGTTGGCTAAGGGAAAATTGATTGTGTTGGAGAAGGTAGAGTTGTATGTACAAAGTATGGTGAAAGATGATTTGAAGGTCAAAAGGGTGGAGCCGAAGAATAATCAATCGGCTTCGCTTGCGACAACCATGGAGACTGCCCCTGCAGCGTCAAAGCCAGCAGGGGTGATGGGGAAGAACCGTGGAGGATTCAGAAGCCATTGAAAAGAAAAGATCGGGACTGCTAAACCGAAAGAGGTCTAATACCATGAGAATGTTTGCTTAATCCACCACACCTAAATGATGTGAAAATTATCTTATTTATAATCAAATAAATGACAAGGATATGGAAAGCCTAATAATGGAAATAACAATAAATAGAAACATATAAGAAATATTTGCCTTATAATTATAATTTAGCACTAAATATCCTCAACAGTAATCATAAAAAATATTTGCTGTGAATGTTTGATTAATCCACCACACCCAAATGGTGGTGAGAGTTCTCTTATTTATAATCATTTACAGAATACATAAATAAGGTAAATTACAAATAATAAGGAAATAGCGATAAAAGGAATAATAAATGAATACAATATATTTGCATTTAGTAAAATGGCAAATATGGTAACCCGTAATGTAAGGCAAATATCTAGATATTTGCCTTATAATGAATGGTCATCTATCCTTAACACCCCCCCGCAAGCTGAGCGTCGGATTTGAACGAACATGAAGCTTGGATCTGAAAAATTCAAAGAGAGGTCGAGAAATACTCTTTGTGAAGATATCAGCAACTTGGAGATGAGAGGGTACATATTGTGTACGAAGTTTGCCAGCGATAACAAGTTCTCGAAGGAAATGATAATCTAGTTCAACATGCTTGGCCCGCTTGTGAGAAACAGAATTAGAGCTAAAAAAAATAGCACTTTTGTTGTCACATAAGAGTAAGAGCTGCTGTGAAATAGGGACCTTGAGGTCATGCAAAAGATGCGTAACCCAAAGAAGTTCAGCAGCAGTTGTGGCAAGAGCACGATACTCAGATTCACAGCTGGAGCGTGATACAGTAGGTTGCTTTTTGGCACTCCAAGAAATGAGATTGTTGCCAAGATAAATAGAATAGCCGGATGTAGAACGACGAGTATCGGGACAACCAGCCCAGTCAGCATCCGAATAAGCGACTAGCGTACTAGGAACAGTGGATGGACGAAAGATAAGACCAAAGTGGAGTGTTCCTTTGACATAGCGAAGAATACGTTTGACAGCAAGAAAGTGATCTGCAGTAGGGGCATGCAAGAATTGACTGACAGAATTGACAGCATAGGCAATATCTGGCCGCGTAATAGTCAAGTACTGAAGGGCGCCAACAAGAGATCTGTAGAGAGTAGGATCAGAGAAAGGAGCACCATCAGCAGTCAGGTGTTGAGAAACAACCATGGGAGTGTGAACTGGTTTGCTATCGAGCAACTGAGCACGAGTAAGAATATCTCGAGCATATTTTAACTGACTGATAAAGAGACCATCAGGAGTGGGTGAAGCTTCAAGACCAAGAAAGTAACTGAGAGAACCCAAATCTTTGGTAGCAAACTCAGAATGAAGCTTGCGAGTAAAGCTGTTAATAAGAGATGAGTTGTTGCCGGTAACAATAATGTCATCAACATAAAGAAGCAAATAGATAAGATTAGATTGCTGATGAAAGACAAAAAGGGACGTGTCAGCGCGACTGCAAGAAAACCCAAGTGTGAGAAGAAATGAGCTAAAACGCTGAAACCAAGCACGAGGAGCTTGCTTTAAGCCATAGAGAGCTTTCTTTAATAGACAAACATGCATAGGAAATCGAGGATCAACATACCCAGGAGGTTGTTCCATATGAACACGTTCAATAAGCGTTCCATTGAGAAAAGCATTCTTGACATCAAGTTGTCGAAGAGGCCATTTATTTGTGAGTGCAATAGAAAGCACAACACGGACAGTGGTAGCTTTGACAACCGGACTGAAAGTGTCAGTGTAGTCAAGACCAGGAACCTGAGTATAACCTTTGGCAACGAGACGAGCCTTGAAACGCTCGACAGATCCATCGGGCAAATATTTAATACGAAACACCCATTTAGAGCCCACGATGTTGGTGTTGGCAGGGCGAGGAACCAAAGTCCAAGTATCATTTTGTTGTAACGCTCGAATTTCTTCATCCATGGCAGCCACCCAAGCAGGATTCTTAGCCGCAGATTTGAATCCTTTTGGCTCAGTGGATGCAAGAAGAGTAGAGAGAAGTCCAGATGAGCCCAACATACCAAGATTTGCTGGATGACGAGTCTTGAATATACCAGCTTTGGCGCGTGTGATCATAGGATGAGTGCCCAAAGAAGAGAAATCAACAGGAGGTTCAATAGAGGTTGAATTAGAAGTCGAGGGTGACAAAGTGGAACCTGCAAGAGAAGTATCAACCTGCACAGACTCATCTACAAGGTCAGAACAAATATCACACGGGGATGAACTGGATTGAGGAATGTGCGGTGATGAAGTGGTAGGGGGGGATGAATCAATATGATGAAGATGTGGTTCCAAGAAATTTGAAATAGGAATAGTGGAAAGAGCTTGGGCTTGGGAGCTAGGGATAGCAGGAAAGTGAGTTTCATCAAATTGAGCATGGCAGGTGATATATAGCTTAGTGGTGGCGGGATCAAGACAGCGGAGCCCTTTATGAATGGGACTATAACCCAAAAAAATACAAGGAATGCTACGGGGAGAAAGCTTGTTAGGCATATAATCACGCAAATAAGGATAAACACGACAACCAAAGGGATGAAAAATGTCATAATGTGGAGTGTAGCCATAAAGAAGTTCAAAGGGTGACTTACCTCCAAGAAGTGGAGTAGGCAACCGGTTGATAATATAAGCTGCAGTGCTGAAGGCGTCAACCCAAAAACGAGGAGAAAGATGAGAGTGAACGAGAAGGGCCAAGCCAGTCTCAGTCACATGACGATGTTTTCTCTCAACACGACCATTTTGAGCAGGTGTATATGGACAAGAGAGTTGATGGTGGATGCCAGAATTACGTAAATGAGTTTTGAAACAAGTACTAGTAAATTCGGTACCACCATCGCTTTGAAATAACTTGATACAAGAAGAATATTGATTTTCCACAAATTTTTGAAATTGAAGAAAAATATAAAAAAAATCAGATTTAAATTTTAAAGGGTAAAACCAAGTGAATTGAGAATAATCATCAATAAAAATAGCATAATAAAGAAAACCCGAATTTGATTTGACGGGAGAAGGACCCCAAAGATCACAATGAATAAGATCTAACACATGAGACGACCTACGTTCATTGCGAGAATAAGGCAGTCGATGACTTTTCGCAAGCTGACAAGTATTACATAATGATGAAGAAGGCAATAAAGACGTAAGAGAAAGATGACCTTTTTTATTTAAAAAAGAAATAACAGAATGATTCACATGACCCAGACGAGCATGCCATAAATCATATGAAGCACGTAAAGATTTGTTTTTAAGGGCTGAAATAAAAGCAGAGTTGCCGCGCTCCAGCACATATAGCCCTCCATCTCTTTTACCGGTTGCCACCACCCTTCCTGTTTGATGATTCTGGATAGTAATAAAATTATTAGTAAATGTAACGGAGAGAGGAAAATCAGACGTTAATTTACTTATGGAAAGAAGATTTTTAGTGAGGTGAGGGACAACCAAGACATCTAATAAGTGAATATTTGGAACAGGAGAAAGAGTACTGATGTGGGTAATGGGTAGGGATGCACCGTTTCCTACAATCACAGAGTCCTTACCCGTGTAATTTTTAGACTGATCCAGAATTGATGGGTCGGCAGTCATATGGGCCGAAGCTCCAGTGTCCAAAAACCAATCAGCAGCATCGGGTCCAGCAATAGAACATGACGTGTTAAAGGCTTCAGCAAGGTGAGCATGAGAAGAATCAGGTCGAACATACCGTTGGTTGCAGCGGTCAGCATAATGGCCCTCTTTGCGGCATATTTGGCAATGAGGTGGTCGACGACCCTGGCTTGAGTGGGTTCGTCCTCGATTAGAAGAGTTGTTTTTGTGAGAATAAGAACGACCTCGCTGGTTGGTAAAGGAAGCAGGGTGACTTTCATGGGTGCGACCACGGTTAGTGGCTATGAATGCTGTAGGAGTGGAGTCAAAGAACTCAAGGGAGCGCTGGAACAACTCAAAACTTTCAGTTTTAGAGACTAGATCTGCAAAACAGGGGATAGGGGTGAGAGCCATCTGAGCAGTAGAAAAAGCTGAAAATTCGGTGCCGAGTCCACGAAGGAACCAGTGCACTTTATCAATGTCCTCGACGGGTCTGCCAATGGCATGAAGTTGGTCACAAATTTTTTTGAAGGCACGGGCATACTCAGCAATAGGTTTTGTGCCACGTTTCATCAACTGCAAGTCATCCTTGAGTCTCAGTTCACGAGCTTTTGACTGATGGCTGAACGTAGTTTCCAACGCAAGCCAAACATCACGTGCAGTAGAGAGACCAACGACAACAACCATGGCTTCCTCAGTGAGAGAGGAGAGCAGGAGACAGAGAAGTCGTTGATCGGCTGCTCTCCATGCCAAATATTTGGGGTTGAATGTTGAGGAGGTTTCTGGTTCAAAGCGAGGTGGTGGAACCATAGTTCCATCGACATAGCCCAGCATGTCTTGACTTTCAAGGAGAGGGAGAAGTTGGCTTTTCCAAAGAAGATAATTGGAGGAAGAAAGTTTGATGGTGATCATATGGATTAAAGTATTGAAAGGAAGAAGATGATAACAAGATTCGGAAGCCATAGAGAAGAAAGGATCAGGGTTGTTAAACCGAAAGGGCTCTGATACCATGTGAATGTTTGATTAATCCACCACACCCAAATGGTGGCGAGAGTTCTCTTATTTATAATTATTTACAGAATACAGAAATAAGGTAAATTACAAATAATAAGGAAATAACGATAAAAGGAAAGAATAATAAATGAATACAATATATTTGCATTTAGTAAAATGGCAAATATGGTAACCCGTAATGTATTCTAGATATTTGCCTTATAATGAATGGTCAACTATCCTTAACATTTGCCTTATAATAAAATATCAAATATTATATATATGAAAAACTATCCACACTAAGAAAACGAAAATTGGTCCTTTCGGGTGAGTTGCAAATTGAGAGAAGTTTCTGAAAAATAAAGGTCTCACGCTCAAAGATATTCCTCCAAACCAATTTCTTTAGCTTGAGGTTAAGATAAGAAAAAGGTTCCATGAAGAAATCAGACCTTGAAAATCCTAGAATCGGTTGTCCAATAAAGAATACCGTGTTTTGAGTTCCAACGAGAAAACAAATTTTGGATGAACTTTGGAGGCGAATATCTTAGGCTACAATCCACGATATTGTATGAAATGAATCCCTAGCTTTTCCTTGTAACACTATCTTTAAGTTTTGTAAAAAAAATTTAGGGAAGAACGCTGCAAATGGAGTTGTAGAAGGCGACTTTTGGATGACAATGTAATACAAAAAGCACGTCTTCTTCCTGTCTAGAAGAAGAAGACGATGATCTGTCCAGTTCAATTGAGCCGACCATGTCAAACTACAATCCAAACTTTCCTTATTTTTCTTAATTTTAACCCTTTCTAGATTTTTTCTCATGAAAAATTTTATGGTTCTAGAAATTAGACACAATAAGACATTTGTGGGAGAAGATTTGACGCAATTTGGATAAGAGAAGCTCGAGGACGGAGGTCCTGAACGTCAACGACGAGGTAAGTAGTCATCTTGGACTTTTCTTAAGAAATACTTGTAGTAATCCCTTGGATTTCTATATGAACCTTAAACTAAGTATGAATTAAGTACGTATGAAATAAAAATACAAAGAATTGAGAGTTATGACTCTGAATCGATCAAATTGCTCAAAAATTTAAGTAAGGTTAAGATGACCCACTAAATGAACTTAGCTGCCTATGAAATTTTAGTATATTAAGATTATATATGAAATTTTGTGTTTATTGGAAGGATAAATAGCTAAACCAAGTAACAATGAAAAATGACTATAATGTTCTTAAGGTAATCTACCTTCCGTTCATGATCTAGATTACCTCCAAAGCCTATGAAAGTTTGTATTAGACCATACTTTATGATGTTTGATGATGTTGTAAAGTTTGAAAATCTTTAGAATACATTAACTAGCTAAACCAAGAATTATCGAATAAAATGATCAAAATGCCCCTGGGATTTCTCATGATATTATAAAGTTTAGATATGCTCCAAATTATTTTCTACTCCATATAAGGCCTATTCCTAAGGACGTGAAGATATATTCAATATTTCAAGTTGATTAGAAAAGGTTTGGAACCTAAATCAAGTTAATATCCAAGAAACACCTAAAGGATACACTTCAAGGTTCAAGACCCTTCTAGAACTCTTTAAACAATTTATTATGAACTTATGACCTTCTTGTATAACTTATGCTTGTTACTATGATGAGTTCATAAGCTAATGAATGCATTACACAATTATGCCTAAAGAATAATAAGAAATACATAAAATGTTTATGATTTAGAACCCAAGGAAGGTACCACACGAGCTCTACAACTATCAAGGTAAGATATTAAACTCCATGTCTTAAAGATTCTATGATACGAAAGAATATTAGATAATACTCTTATCATGTCCAAGTTGACCCATGATCTCCCACCACGGGGTGCTTTTAGAGGCCCATGTTTTCCTCTTTTAGGTGGGATGCCCTTTGTGACAATCGCACTCTTGATGGCAGCGAACTTGCGATTGTGCAAAACTCACTTTCCAACGACAAGTGAGCTAAGACAATTCGTTCTTACGTCGCCTACAGCCAAGCAACGTATGCTCGAGTCTCTAGCCTCAGTTTAAGAGAAGGTTTTAGAAAATGAGGGAGAGAGAGATTTTCGAAAGAGAGATTTTGGAAAGAGACTTATATAAGCAAGCAAGAGAGTAACAACAACGGCTCACAGTAACTCACCAATGAAGTAGGTTGGTTTTGACTCTTGCACCGAAACAAATAATTTAAATATAAAAAATAATTTGAAGGGAGAATTTCTTTCTACTCAATCAACTGTATCTTTTTTTTTTTTTTTTTTTTTTTCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTTTTTTTTTTTTTTTTTTTTGTCTGTCTCAACTATTCATTGTGTGTGAGTAAGAGATGTTTCTTTTAATCTCTGTCGCCGTTGCCATGAAGCCTTCTCATGAACCTTAAGATGACCAATGACCTCCTCAATTGACATGTTCTTGAGGTCACCAAACTGCTTGATGAAGGTAACAATCTACATGAATCTCGGGGGACAACTTGAAGCAACCTCTAGATTTTGGAGATCTCCTCAACTTTGTTGCCAAGCAAATGATGTTGATGACCATCAGTTCATGGCAAAGTATTCTACCAACTCACCATCCTTCATGTGGATAACCTTGAACTTACTCTTTAGGGTTTTCACCTTGGCTTCTTTGACCCGTTCCACACCCATATGCATTGTTTACTATGTCTCCCAACACTTTCTTTGTCAAATAGTTTTCTACCTATATGAGAAGGACGTTCTCATGAACTGCATGGTACTCCTTAATGTTGTCACCATGCTCGATGGGTCCCACACGCTTTATGGCTATAAGTTAACACGCATCTTTATGGATCATGTTGAGTAGTTAGGAGTAATTGGCATTGGAGCGTTATACTCCCCTCTTTTATGCTCTTTATCCTTGCCACATCTCTTCCGGTGGCTTTTTGTGGTGAAGACATTTGTTTCGATAGGTTGGTTTTGACTGTCGATCGAAGTACACTATAACTAAAATAAAAAAGAACAATTTGAGGGAGAGTTTCTTTGTACAGAATAACTTTTAAGCTCTATGCTTTTTAATTCCTTTTGTTGTTGTGACTGAAGTTTACATTTGAAGACTATTTTAAGGGAAAAACACTACTTAATTTCCTAAACTTTATCTACAAGTTAATATTTACTAATAATTCTCCTCCTAAAAAATACTTACCATTTTACTCAACATGCTTGAGTTTAATACTTACTCATAATTCTCCTAAAATTGTTCAAAGTTAATAACTTATTTTACCAAGCTAAGCGTATTGGCTCACAAAATCTACCTAATTGATTTCTTACTTACCCACGTGTATTTGAAGATTCCTTCACCATAGCTACTGCTGTAACTGCTTTTTCCATTTTTCAAATTTTTAGACTATGCATGATTAA

mRNA sequence

ATGTTTGCTGGCATTAAGTACCCATGGAGCCACGCTTGTGCATGTGATGGAGGTGGTGTGGTTTTAGTACCAGACAGGAGTTTTCTGATTCTTCCGTTGGTGCTTAAAGGTCCATGCAAAGGATCCATTGGTCTGCGGATTAATGGCGAATTGTTGGCTCCTATCGACCAATATTTCGCCACTGGCCAAACTTGGCTGAGTATCTATGAAGTTGAAAACTTTTTTGTCGACGCTTATGGCAGCTTGAACGCCCGCGGTTCTTCAGCTTGGCCTTTCAAAACTTCTAACCGTCCAATTGCAAATGTCAATAATGTCACGTTTGATGACATTAGAGCAATGGCTCCAGAAGATAGCCCCAACACAACACAGATGGAATCCACATTTCCAAGTCAAGTGGTATCAACTTTATGCAGTCAAGATTCGACACTGGAGACTTGTATCTCTTTGGACCCTGGAAGTAGATTCATCAACATAACAAACATCCATCGTGATCCAGACCACGGAATTAGCATCGGTAGTCTTGGAAAATACCCAAATGAAGAAAATGTCTTTAAAGTCATAACTATGCATGATTAA

Coding sequence (CDS)

ATGTTTGCTGGCATTAAGTACCCATGGAGCCACGCTTGTGCATGTGATGGAGGTGGTGTGGTTTTAGTACCAGACAGGAGTTTTCTGATTCTTCCGTTGGTGCTTAAAGGTCCATGCAAAGGATCCATTGGTCTGCGGATTAATGGCGAATTGTTGGCTCCTATCGACCAATATTTCGCCACTGGCCAAACTTGGCTGAGTATCTATGAAGTTGAAAACTTTTTTGTCGACGCTTATGGCAGCTTGAACGCCCGCGGTTCTTCAGCTTGGCCTTTCAAAACTTCTAACCGTCCAATTGCAAATGTCAATAATGTCACGTTTGATGACATTAGAGCAATGGCTCCAGAAGATAGCCCCAACACAACACAGATGGAATCCACATTTCCAAGTCAAGTGGTATCAACTTTATGCAGTCAAGATTCGACACTGGAGACTTGTATCTCTTTGGACCCTGGAAGTAGATTCATCAACATAACAAACATCCATCGTGATCCAGACCACGGAATTAGCATCGGTAGTCTTGGAAAATACCCAAATGAAGAAAATGTCTTTAAAGTCATAACTATGCATGATTAA

Protein sequence

MFAGIKYPWSHACACDGGGVVLVPDRSFLILPLVLKGPCKGSIGLRINGELLAPIDQYFATGQTWLSIYEVENFFVDAYGSLNARGSSAWPFKTSNRPIANVNNVTFDDIRAMAPEDSPNTTQMESTFPSQVVSTLCSQDSTLETCISLDPGSRFINITNIHRDPDHGISIGSLGKYPNEENVFKVITMHD
Homology
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BLAST of CmaCh16G009320 vs. Swiss-Prot
Match: PGLR2_PLAAC (Exopolygalacturonase (Fragment) OS=Platanus acerifolia GN=plaa2 PE=1 SV=1)

HSP 1 Score: 96.7 bits (239), Expect = 3.0e-19
Identity = 62/210 (29.52%), Postives = 100/210 (47.62%), Query Frame = 1 

Query: 9   WSHACACDGGGVVLVPDRSFLILPLVLKGPCKGS-IGLRINGELLAPIDQYFATGQTWLS 68
           W  ACA  G   VL+P  ++ +  + ++GPCKGS IG +I+G + AP D        W+S
Sbjct: 31  WKAACASQGPSTVLIPKGNYNMGEVAMQGPCKGSKIGFQIDGVVKAPADPSKFKSDGWVS 90

Query: 69  IYEVENFFVDAYGSLNARG-----------------------------SSAWPFKTSNRP 128
            Y ++   V   G+L+ +G                             +      + N  
Sbjct: 91  FYRIDGLTVSGTGTLDGQGQTAWAKNNCDKNPNCKHAAMNLRFDFLKHAMVRDITSLNSK 150

Query: 129 IANVN-----NVTFDDIRAMAPEDSPNTTQMESTFPSQVVSTLCSQDSTLETCISLDPGS 184
           + ++N     ++TF  +   AP  S NT  +     S+ V+   ++ +T + CIS+ PGS
Sbjct: 151 MFHINVLECEDITFQHVTVTAPGTSINTDGIHVGI-SKGVTITNTKIATGDDCISIGPGS 210

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BLAST of CmaCh16G009320 vs. Swiss-Prot
Match: PGLR_MEDSA (Polygalacturonase OS=Medicago sativa PE=2 SV=1)

HSP 1 Score: 95.1 bits (235), Expect = 8.7e-19
Identity = 60/214 (28.04%), Postives = 94/214 (43.93%), Query Frame = 1 

Query: 9   WSHACACDGGGVVLVPDRSFLILPLVLKGPCKGSIGLRINGELLAPIDQYFATG-QTWLS 68
           W+ ACA      +++P  ++ +  + LKGPCK  I L+++G + AP D     G + W  
Sbjct: 46  WNEACASTTAAKIVIPAGTYQLNGIELKGPCKAPIELQVDGTIQAPADPSVIKGTEQWFK 105

Query: 69  IYEVENFFVDAYGSLNARG---------SSAWPFKTSNRP-------------------- 128
              +++  +   G  + +G         +SAW  K SN                      
Sbjct: 106 FLYMDHLTLSGKGVFDGQGATVYKKAAPASAWSGKNSNSKVFMNFGFNFVNNSIVRGVTS 165

Query: 129 ---------IANVNNVTFDDIRAMAPEDSPNTTQMESTFPSQVVSTLCSQDSTLETCISL 184
                    +    N+TFD     AP DSPNT  +     S  V  L +   T + C+S+
Sbjct: 166 KDSKNFHVMVFGCKNITFDGFTITAPGDSPNTDGIHMG-KSTDVKILNTNIGTGDDCVSI 225

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BLAST of CmaCh16G009320 vs. Swiss-Prot
Match: PGLR3_ARATH (Probable polygalacturonase At3g15720 OS=Arabidopsis thaliana GN=At3g15720 PE=1 SV=1)

HSP 1 Score: 89.0 bits (219), Expect = 6.2e-17
Identity = 61/197 (30.96%), Postives = 97/197 (49.24%), Query Frame = 1 

Query: 9   WSHACACDGGGVVLVP-DRSFLILPLVLKGPCKGS-IGLRINGELLAPID-QYFATGQTW 68
           W   C+  G G  +VP   +F++ PL  +G CK + + +++ G+L+AP    +      W
Sbjct: 47  WEAVCSGTGDGQFVVPAGMTFMLQPLKFQGSCKSTPVFVQMLGKLVAPSKGNWKGDKDQW 106

Query: 69  LSIYEVENFFVDAYGSLNARGSSAWPFKTS---------------------NRPIANV-- 128
           +   ++E   ++  G +N +GSS W  K S                     + P+A++  
Sbjct: 107 ILFTDIEGLVIEGDGEINGQGSSWWEHKGSRPTALKFRSCNNLRLSGLTHLDSPMAHIHI 166

Query: 129 ---NNVTFDDIRAMAPEDSPNTTQMESTFPSQVVSTLCSQDSTLETCISLDPGSRFINIT 177
              N VT   +R  APE SPNT  ++    S VV   C   +T + CI+++ G+  I+I+
Sbjct: 167 SECNYVTISSLRINAPESSPNTDGIDVGASSNVVIQDCII-ATGDDCIAINSGTSNIHIS 226

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BLAST of CmaCh16G009320 vs. Swiss-Prot
Match: PGLR_OENOR (Exopolygalacturonase (Fragment) OS=Oenothera organensis PE=2 SV=1)

HSP 1 Score: 84.7 bits (208), Expect = 1.2e-15
Identity = 64/209 (30.62%), Postives = 89/209 (42.58%), Query Frame = 1 

Query: 9   WSHACACDGGGVVLVPDRSFLILPLVLKGPCKGSIGLRINGELLAPIDQYFATGQTWLSI 68
           W  ACA      +LVP  +F +  + L+GPCK SIGL++ G L AP D     G  W+++
Sbjct: 10  WKEACASASPSTILVPKGNFAVGLITLEGPCKSSIGLQLQGTLKAPADPSKIKGLGWINL 69

Query: 69  YEVENFFVDAYGSLNARGSSAWPFKT--SNRPIANVNN-------VTFDDIRAMAPEDSP 128
            +++   +   G  + +G SAW       N PI    +       VT   +R +   DS 
Sbjct: 70  NKIDLLTIFGGGVFDGQGKSAWVQNDCHKNGPICKTLSMNLRLYAVTNSILRDVTTLDSK 129

Query: 129 N-----TTQMESTFPSQVVSTLCSQDSTLETCISLDPGSRF------------------- 184
           N           TF    +S   +  +T    I    G                      
Sbjct: 130 NFHVNVIGCKNLTFERFKISAAETSINTDGIHIGRSDGVNIINTEIKTGDDCISLGDGSK 189

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BLAST of CmaCh16G009320 vs. Swiss-Prot
Match: PGLR_TOBAC (Polygalacturonase OS=Nicotiana tabacum GN=PG1 PE=2 SV=1)

HSP 1 Score: 83.6 bits (205), Expect = 2.6e-15
Identity = 62/209 (29.67%), Postives = 94/209 (44.98%), Query Frame = 1 

Query: 9   WSHACACDGGGVVLVPDRSFLILPLVLKGPCKGSIGLRINGELLAPIDQYFATGQTWLSI 68
           +  AC       +++P  +F +  + L+GPCK  + L+I   L AP D        WL++
Sbjct: 48  FKEACQSTSPSTIVIPKGTFTMNQVKLEGPCKSPLELQIQATLKAPSDPSQLKVGEWLTV 107

Query: 69  YEVENFFVDAYGSLNARGSSAWPFKTS----------------NRPI------------A 128
            +++ F +   G L+ + ++AW  K S                N  I             
Sbjct: 108 NKLDQFTMSGGGILDGQAAAAWECKQSKKCNKLPNNLSFNSLTNSTIKDITTLDSKSFHV 167

Query: 129 NVN---NVTFDDIRAMAPEDSPNTTQMESTFPSQVVSTLCSQDSTLETCISLDPGSRFIN 187
           NVN   N+TF      AP +SPNT  +  +  S V  T  S  ST + CIS+   +  + 
Sbjct: 168 NVNQCKNLTFIRFNVSAPANSPNTDGIHVSRSSSVNIT-DSNFSTGDDCISVGDETEQLY 227

[Close]
BLAST of CmaCh16G009320 vs. TrEMBL
Match: A0A0A0L7H9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G063610 PE=3 SV=1)

HSP 1 Score: 193.0 bits (489), Expect = 3.4e-46
Identity = 100/206 (48.54%), Postives = 134/206 (65.05%), Query Frame = 1 

Query: 9   WSHACACDGGGVVLVPDRS-FLILPLVLKGPCKGSIGLRINGELLAPIDQYFATGQTWLS 68
           WS AC  +GGG+VL+P +  FL+LPL+L+GPC G I ++++GELLAP+D++FATG  WLS
Sbjct: 21  WSEACTNNGGGIVLIPAKGRFLVLPLLLQGPCHGFIRIQLDGELLAPLDEHFATGDYWLS 80

Query: 69  IYEVENFFVDAYGSLNARGSSAWPFKTSNRPIA----NVNN------------------- 128
           I +V N F+D  GSL+ RGS+AWP  + NRP++     +NN                   
Sbjct: 81  IDQVNNLFIDGLGSLDGRGSTAWPSTSHNRPVSMRLNGINNARITNIKSYNSKLFHFAMH 140

Query: 129 ----VTFDDIRAMAPEDSPNTTQMESTFPSQVVSTLCSQDSTLETCISLDPGSRFINITN 187
               VTFD +  +AP +SPNT  +  +  S  ++ + S   T + CISL PGS+FINITN
Sbjct: 141 GCRDVTFDHVTVIAPANSPNTDGIHIS-SSSGINIMHSTIGTGDDCISLGPGSKFINITN 200

[Close]
BLAST of CmaCh16G009320 vs. TrEMBL
Match: W9RBH8_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_014009 PE=3 SV=1)

HSP 1 Score: 127.1 bits (318), Expect = 2.3e-26
Identity = 73/210 (34.76%), Postives = 106/210 (50.48%), Query Frame = 1 

Query: 9   WSHACACDGGGVVLVPDRSFLILPLVLKGPCKGSIGLRINGELLAPIDQ-YFATGQTWLS 68
           W+HAC   GGG+VL+P  ++L+ P+VLKG CKG +   + G+L AP DQ  +     W++
Sbjct: 52  WTHACQSVGGGMVLIPKGTYLVNPVVLKGTCKGQMVFFLQGDLKAPTDQKSWDDIDHWIT 111

Query: 69  IYEVENFFVDAYGSLNARGSSAWPFKTSNRP----------------------------- 128
              V+NF +   GSL+ +G+SAWP+ T N+                              
Sbjct: 112 FQYVDNFVMSGGGSLDGQGASAWPYNTCNKDSHCKKLPVSLRLDFVNNAWISYIKLINSK 171

Query: 129 -----IANVNNVTFDDIRAMAPEDSPNTTQMESTFPSQVVSTLCSQDSTLETCISLDPGS 184
                I   NN+  + +  MAP DSPNT  +     S  +    S  ST + C+S  PG 
Sbjct: 172 NFHMNIFACNNIKLEHMHIMAPGDSPNTDGIHIAL-STGIKVWDSIISTGDDCLSFGPGM 231

[Close]
BLAST of CmaCh16G009320 vs. TrEMBL
Match: A0A0D2Q1X5_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_006G016500 PE=3 SV=1)

HSP 1 Score: 113.6 bits (283), Expect = 2.6e-22
Identity = 69/209 (33.01%), Postives = 104/209 (49.76%), Query Frame = 1 

Query: 9   WSHACACDGGGVVLVPDRSFLILPLVLKGPCKGSIGLRINGELLAPIDQYFATGQTWLSI 68
           W+ AC  +GG +V +P   +++  +   GPC+G I   I+G+L API  Y +  + W+  
Sbjct: 48  WNDACYQNGGSIVYIPKGVYMVGSVEFAGPCRGPIMFLISGDLKAPIGPY-SNVEKWIGF 107

Query: 69  YEVENFFVDAYGSLNARGSSAWPF----KTSN---------------------------- 128
             V N  V   G+L+ +G SAWP+    KT+N                            
Sbjct: 108 QHVNNLIVKGGGTLDGQGPSAWPYNKCQKTNNCDPLPISIKFDFVTNSRIESIRSVNSKN 167

Query: 129 --RPIANVNNVTFDDIRAMAPEDSPNTTQMESTFPSQVVSTLCSQDSTLETCISLDPGSR 184
               I   NNV    +  +AP DSPNT  ++ +  + +  T  S+  T + CI++  GS 
Sbjct: 168 VHLAIYGCNNVNVSKVDLLAPADSPNTDGIKISRSADIRIT-NSRIRTGDDCIAIISGSS 227

[Close]
BLAST of CmaCh16G009320 vs. TrEMBL
Match: A5BTN5_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_027614 PE=3 SV=1)

HSP 1 Score: 110.5 bits (275), Expect = 2.2e-21
Identity = 66/199 (33.17%), Postives = 95/199 (47.74%), Query Frame = 1 

Query: 9   WSHACACDGGGVVLVP-DRSFLILPLVLKGPCKGSIGLRINGELLAPIDQYFATGQTWLS 68
           W  AC   G  V+ VP    + +  +   GPCKGSI   I  +L AP D+   T   W+ 
Sbjct: 55  WEAACEQQGTSVITVPRGGKYYVRQVAFTGPCKGSITFLIQADLYAPTDKSSHTLTYWIK 114

Query: 69  IYEVENFFVDAYGSLNARGSSAWPFK--------------------TSNRPIANVNNVTF 128
              V+   +    +L   G SAWP+K                     S    +NV +VT 
Sbjct: 115 FGYVDYLTIAGLANLYGGGPSAWPYKGCGQGQECLQVVPHDQSMLKISTSAYSNVQDVTL 174

Query: 129 DDIRAMAPEDSPNTTQMESTFPSQVVSTLCSQDSTLETCISLDPGSRFINITNIHRDPDH 187
            DIR  AP DSPNT  +     S+ V  L S  +T + C+++  GS+ +NI+     P H
Sbjct: 175 SDIRTTAPHDSPNTDGVHIAV-SERVKILDSTFNTGDDCVAIFSGSKDVNISRSICGPGH 234

[Close]
BLAST of CmaCh16G009320 vs. TrEMBL
Match: A0A022RRP5_ERYGU (Uncharacterized protein OS=Erythranthe guttata GN=MIMGU_mgv1a019884mg PE=3 SV=1)

HSP 1 Score: 108.2 bits (269), Expect = 1.1e-20
Identity = 70/216 (32.41%), Postives = 96/216 (44.44%), Query Frame = 1 

Query: 4   GIKYPWSHACACDGGGVVLVPDRSFLILPLVLKGPCKGSIGLRINGELLAPIDQYFATGQ 63
           G    W  AC  DGG +V VP  SF I     KGPC G    R++G L+A  D       
Sbjct: 36  GFLEAWKRACEIDGG-IVSVPFGSFFISSADFKGPCNGQTLFRVDGTLIASDDSTLGNQD 95

Query: 64  TWLSIYEVENFFVDAYGSLNARGSSAWPF-----KTSNRP-------------------- 123
            W++ Y+V+   +   G+ +  G+S+W       K  N P                    
Sbjct: 96  YWITFYKVDLLKLSGNGAFDGNGASSWSHCEGHKKCRNMPPSTLKINYVKNARIQGIKLI 155

Query: 124 --------IANVNNVTFDDIRAMAPEDSPNTTQMESTFPSQVVSTLCSQDSTLETCISLD 183
                   I   +NV    +  +APEDSPNT  +     S  V  + S  +T + C+S+ 
Sbjct: 156 NSKMFHVHIHESDNVVVKQVNILAPEDSPNTDGIH-IGNSNGVRIMDSYIATGDDCVSMG 215

Query: 184 PGSRFINITNIHRDPDHGISIGSLGKYPNEENVFKV 187
            GS  +NIT     P HGISIGSLGKY  E++VF +
Sbjct: 216 EGSTNVNITGTWCGPGHGISIGSLGKYKEEKDVFGI 249

[Close]
BLAST of CmaCh16G009320 vs. TAIR10
Match: AT4G35670.1 (AT4G35670.1 Pectin lyase-like superfamily protein)

HSP 1 Score: 99.0 bits (245), Expect = 3.4e-21
Identity = 69/217 (31.80%), Postives = 103/217 (47.47%), Query Frame = 1 

Query: 9   WSHACACDGG-GVVLVPD-RSFLILPLVLKGPCK-GSIGLRINGELLAPIDQYF---ATG 68
           W+ AC  DG    +L+P  ++FL+ P V +GPCK  SI ++++G ++AP D++       
Sbjct: 47  WTAACGGDGDIKTLLIPSGKTFLLQPTVFQGPCKSSSIKVQLDGTIVAPSDKFAWSDPIS 106

Query: 69  QTWLSIYEVENFFVDAYGSLNARGSSAWP--FKTSNRP---------------------- 128
           + W+    V    +   G++++RGSS W    K S RP                      
Sbjct: 107 RMWIKFSTVSGLIIVGSGTIDSRGSSFWELNLKASQRPTALHISKCDNLRINGITSIDSP 166

Query: 129 -----IANVNNVTFDDIRAMAPEDSPNTTQMESTFPSQVVSTLCSQDSTLETCISLDPGS 188
                I   N V   +I   APE SPNT  ++ +  S  ++   S   T + CI+++ GS
Sbjct: 167 KNHISIKTCNTVAISNINLFAPETSPNTDGIDIS-DSTNINIFDSTIQTGDDCIAINSGS 226

Query: 189 RFINITNIHRDPDHGISIGSLGKYPNEENVFKVITMH 191
             INIT I+  P HGIS+GSLG    E  V  V   H
Sbjct: 227 SNINITGINCGPGHGISVGSLGAGGAEAKVSDVQVTH 262

[Close]
BLAST of CmaCh16G009320 vs. TAIR10
Match: AT5G27530.1 (AT5G27530.1 Pectin lyase-like superfamily protein)

HSP 1 Score: 95.1 bits (235), Expect = 4.9e-20
Identity = 63/195 (32.31%), Postives = 100/195 (51.28%), Query Frame = 1 

Query: 9   WSHACACDGG-GVVLVPD-RSFLILPLVLKGPCKG-SIGLRINGELLAPIDQYFATG--- 68
           W+  C  +     + +P  +++L+ P+  KGPCK  SI L+++G ++AP +    +    
Sbjct: 76  WNATCGGEENINTLFIPSGKTYLLQPIEFKGPCKSTSIKLQLDGIIVAPSNITSWSNPKS 135

Query: 69  QTWLSIYEVENFFVDAYGSLNARGSSAWPF-------------------KTSNRPIANVN 128
           QTW+S   V    +D  G++N RGSS W                       S+  I N +
Sbjct: 136 QTWISFSGVPGLMIDGSGTINGRGSSFWEALHICNCNNLTINGITSIDSPKSHISIKNCH 195

Query: 129 NVTFDDIRAMAPEDSPNTTQMESTFPSQVVSTLCSQDSTLET---CISLDPGSRFINITN 176
            V    I  +APE+SPNT  ++ ++ + V       DST++T   CI+++ GS  INIT 
Sbjct: 196 YVAISKINILAPENSPNTDGIDISYSTNVNIF----DSTIQTGDDCIAINTGSSSINITQ 255

[Close]
BLAST of CmaCh16G009320 vs. TAIR10
Match: AT2G26620.1 (AT2G26620.1 Pectin lyase-like superfamily protein)

HSP 1 Score: 91.7 bits (226), Expect = 5.4e-19
Identity = 64/212 (30.19%), Postives = 95/212 (44.81%), Query Frame = 1 

Query: 9   WSHACA-CDGGGVVLVPDRSFLILPLVLKGPCKGSIGLRINGELLAPIDQYFATGQTWLS 68
           WS AC    G   + VP  +F +  +   GPCK  I   I+G LLAP +       TW++
Sbjct: 54  WSRACKRISGSSKIYVPKGTFYLGGVEFVGPCKNPIEFIIDGTLLAPANPNDIKQDTWIN 113

Query: 69  IYEVENFFVDAYGSLNARGSSAWPFKTSN-----------RPIANVNNVTFDDIRAM--- 128
              + N  +   G+L+ +G  +WP    +              A VNN    DI ++   
Sbjct: 114 FRYINNLSISGSGTLDGQGKQSWPLNDCHKNPNCPKLAISMGFAFVNNSNIKDITSLNSK 173

Query: 129 --------------------APEDSPNTT--QMESTFPSQVVSTLCSQDSTLETCISLDP 184
                               AP DSPNT   +M S    Q+ +T      T + CI++  
Sbjct: 174 MGHFNFFFVHHFNITGVTITAPSDSPNTDGIKMGSCSNIQISNT---NIGTGDDCIAILS 233

[Close]
BLAST of CmaCh16G009320 vs. TAIR10
Match: AT3G15720.1 (AT3G15720.1 Pectin lyase-like superfamily protein)

HSP 1 Score: 89.0 bits (219), Expect = 3.5e-18
Identity = 61/197 (30.96%), Postives = 97/197 (49.24%), Query Frame = 1 

Query: 9   WSHACACDGGGVVLVP-DRSFLILPLVLKGPCKGS-IGLRINGELLAPID-QYFATGQTW 68
           W   C+  G G  +VP   +F++ PL  +G CK + + +++ G+L+AP    +      W
Sbjct: 47  WEAVCSGTGDGQFVVPAGMTFMLQPLKFQGSCKSTPVFVQMLGKLVAPSKGNWKGDKDQW 106

Query: 69  LSIYEVENFFVDAYGSLNARGSSAWPFKTS---------------------NRPIANV-- 128
           +   ++E   ++  G +N +GSS W  K S                     + P+A++  
Sbjct: 107 ILFTDIEGLVIEGDGEINGQGSSWWEHKGSRPTALKFRSCNNLRLSGLTHLDSPMAHIHI 166

Query: 129 ---NNVTFDDIRAMAPEDSPNTTQMESTFPSQVVSTLCSQDSTLETCISLDPGSRFINIT 177
              N VT   +R  APE SPNT  ++    S VV   C   +T + CI+++ G+  I+I+
Sbjct: 167 SECNYVTISSLRINAPESSPNTDGIDVGASSNVVIQDCII-ATGDDCIAINSGTSNIHIS 226

[Close]
BLAST of CmaCh16G009320 vs. TAIR10
Match: AT5G44830.1 (AT5G44830.1 Pectin lyase-like superfamily protein)

HSP 1 Score: 88.6 bits (218), Expect = 4.6e-18
Identity = 63/199 (31.66%), Postives = 101/199 (50.75%), Query Frame = 1 

Query: 15  CDGGG---VVLVP-DRSFLILPLVLKGPCKG-SIGLRINGELLAPIDQYFATGQT---WL 74
           C  GG     L+P +++FL+ PL  +GPCK  S+ ++ +G+++API++   +      W+
Sbjct: 2   CGSGGNSKTFLIPSNQTFLLQPLTFQGPCKSPSVQVKFDGKIVAPINKAAWSESKLFRWV 61

Query: 75  SIYEVENFFVDAYGSLNARGSSAWP--------------FKTSNRP-----IANVNNVTF 134
           S  E+    V+  G+++ RGSS W                 + N P     I+    V  
Sbjct: 62  SFKEIIGLTVNGSGTIHGRGSSFWKQLHFQRCNDLKIIGITSFNSPRNHISISECKRVQL 121

Query: 135 DDIRAMAPEDSPNTTQMESTFPSQVVSTLCSQDSTLETCISLDPGSRFINITNIHRDPDH 187
             I+ +APEDSPNT  +  +  S V     +   T + C++++ GS  INIT ++  P H
Sbjct: 122 TKIKLVAPEDSPNTDGINISGSSDV-DVYDTFIGTGDDCVAINNGSVNINITRMNCGPGH 181

[Close]
BLAST of CmaCh16G009320 vs. NCBI nr
Match: gi|700200928|gb|KGN56061.1| (hypothetical protein Csa_3G063610 [Cucumis sativus])

HSP 1 Score: 193.0 bits (489), Expect = 4.9e-46
Identity = 100/206 (48.54%), Postives = 134/206 (65.05%), Query Frame = 1 

Query: 9   WSHACACDGGGVVLVPDRS-FLILPLVLKGPCKGSIGLRINGELLAPIDQYFATGQTWLS 68
           WS AC  +GGG+VL+P +  FL+LPL+L+GPC G I ++++GELLAP+D++FATG  WLS
Sbjct: 21  WSEACTNNGGGIVLIPAKGRFLVLPLLLQGPCHGFIRIQLDGELLAPLDEHFATGDYWLS 80

Query: 69  IYEVENFFVDAYGSLNARGSSAWPFKTSNRPIA----NVNN------------------- 128
           I +V N F+D  GSL+ RGS+AWP  + NRP++     +NN                   
Sbjct: 81  IDQVNNLFIDGLGSLDGRGSTAWPSTSHNRPVSMRLNGINNARITNIKSYNSKLFHFAMH 140

Query: 129 ----VTFDDIRAMAPEDSPNTTQMESTFPSQVVSTLCSQDSTLETCISLDPGSRFINITN 187
               VTFD +  +AP +SPNT  +  +  S  ++ + S   T + CISL PGS+FINITN
Sbjct: 141 GCRDVTFDHVTVIAPANSPNTDGIHIS-SSSGINIMHSTIGTGDDCISLGPGSKFINITN 200

[Close]
BLAST of CmaCh16G009320 vs. NCBI nr
Match: gi|778688362|ref|XP_011652730.1| (PREDICTED: exopolygalacturonase-like [Cucumis sativus])

HSP 1 Score: 193.0 bits (489), Expect = 4.9e-46
Identity = 100/206 (48.54%), Postives = 134/206 (65.05%), Query Frame = 1 

Query: 9   WSHACACDGGGVVLVPDRS-FLILPLVLKGPCKGSIGLRINGELLAPIDQYFATGQTWLS 68
           WS AC  +GGG+VL+P +  FL+LPL+L+GPC G I ++++GELLAP+D++FATG  WLS
Sbjct: 21  WSEACTNNGGGIVLIPAKGRFLVLPLLLQGPCHGFIRIQLDGELLAPLDEHFATGDYWLS 80

Query: 69  IYEVENFFVDAYGSLNARGSSAWPFKTSNRPIA----NVNN------------------- 128
           I +V N F+D  GSL+ RGS+AWP  + NRP++     +NN                   
Sbjct: 81  IDQVNNLFIDGLGSLDGRGSTAWPSTSHNRPVSMRLNGINNARITNIKSYNSKLFHFAMH 140

Query: 129 ----VTFDDIRAMAPEDSPNTTQMESTFPSQVVSTLCSQDSTLETCISLDPGSRFINITN 187
               VTFD +  +AP +SPNT  +  +  S  ++ + S   T + CISL PGS+FINITN
Sbjct: 141 GCRDVTFDHVTVIAPANSPNTDGIHIS-SSSGINIMHSTIGTGDDCISLGPGSKFINITN 200

[Close]
BLAST of CmaCh16G009320 vs. NCBI nr
Match: gi|659096624|ref|XP_008449197.1| (PREDICTED: exopolygalacturonase-like [Cucumis melo])

HSP 1 Score: 179.9 bits (455), Expect = 4.3e-42
Identity = 98/206 (47.57%), Postives = 129/206 (62.62%), Query Frame = 1 

Query: 9   WSHACACDGGGVVLVPDRS-FLILPLVLKGPCKGSIGLRINGELLAPIDQYFATGQTWLS 68
           WS AC  +GGGVVL+P    FL+LPL+L+GPC G I ++++GELLAP+++   TG  WLS
Sbjct: 21  WSEACTNNGGGVVLIPALGRFLVLPLLLQGPCHGFIHIQLDGELLAPLNEN--TGDYWLS 80

Query: 69  IYEVENFFVDAYGSLNARGSSAWPFKTSNRPIA----NVNN------------------- 128
           I +V N F+D  G LN RGS+AWP  + NRPI+     +NN                   
Sbjct: 81  IDKVNNLFIDGLGRLNGRGSTAWPSASHNRPISMKLTGINNARISNIKSYNSKLFHFAVH 140

Query: 129 ----VTFDDIRAMAPEDSPNTTQMESTFPSQVVSTLCSQDSTLETCISLDPGSRFINITN 187
               VTFD +  +AP +SPNT  +  +  S  ++ + S   T + CISL PGS+FINITN
Sbjct: 141 GCRDVTFDHVTVIAPANSPNTDGIHVSL-SSGINIMHSTIGTGDDCISLGPGSKFINITN 200

[Close]
BLAST of CmaCh16G009320 vs. NCBI nr
Match: gi|449463753|ref|XP_004149596.1| (PREDICTED: exopolygalacturonase-like [Cucumis sativus])

HSP 1 Score: 175.3 bits (443), Expect = 1.1e-40
Identity = 96/206 (46.60%), Postives = 126/206 (61.17%), Query Frame = 1 

Query: 9   WSHACACDGGGVVLVPDRS-FLILPLVLKGPCKGSIGLRINGELLAPIDQYFATGQTWLS 68
           WS AC  +GGGVVL+P +  FL+LPL+L+GPC G I ++++GELLA  D+ FA G  WLS
Sbjct: 11  WSGACGNNGGGVVLIPAQGKFLVLPLLLQGPCHGVIRIQLDGELLASSDKQFAIGDHWLS 70

Query: 69  IYEVENFFVDAYGSLNARGSSAWPFKTSNRPIA----NVN-------------------- 128
           I  V N F+D  G L   G+SAWP  + NRPI+    NVN                    
Sbjct: 71  IENVNNLFIDGLGRLTGSGASAWPSNSLNRPISMKFNNVNTASIKNISSFDSKFFHFAVH 130

Query: 129 ---NVTFDDIRAMAPEDSPNTTQMESTFPSQVVSTLCSQDSTLETCISLDPGSRFINITN 187
              +VTFD++  +AP +SPNT  +  +  S  ++ + S   T + CISL PGS+ INI+N
Sbjct: 131 ASRDVTFDNVTVVAPANSPNTDGIHIS-TSSGINIMHSTIGTGDDCISLGPGSKMINISN 190

[Close]
BLAST of CmaCh16G009320 vs. NCBI nr
Match: gi|703111902|ref|XP_010099972.1| (hypothetical protein L484_014009 [Morus notabilis])

HSP 1 Score: 127.1 bits (318), Expect = 3.3e-26
Identity = 73/210 (34.76%), Postives = 106/210 (50.48%), Query Frame = 1 

Query: 9   WSHACACDGGGVVLVPDRSFLILPLVLKGPCKGSIGLRINGELLAPIDQ-YFATGQTWLS 68
           W+HAC   GGG+VL+P  ++L+ P+VLKG CKG +   + G+L AP DQ  +     W++
Sbjct: 52  WTHACQSVGGGMVLIPKGTYLVNPVVLKGTCKGQMVFFLQGDLKAPTDQKSWDDIDHWIT 111

Query: 69  IYEVENFFVDAYGSLNARGSSAWPFKTSNRP----------------------------- 128
              V+NF +   GSL+ +G+SAWP+ T N+                              
Sbjct: 112 FQYVDNFVMSGGGSLDGQGASAWPYNTCNKDSHCKKLPVSLRLDFVNNAWISYIKLINSK 171

Query: 129 -----IANVNNVTFDDIRAMAPEDSPNTTQMESTFPSQVVSTLCSQDSTLETCISLDPGS 184
                I   NN+  + +  MAP DSPNT  +     S  +    S  ST + C+S  PG 
Sbjct: 172 NFHMNIFACNNIKLEHMHIMAPGDSPNTDGIHIAL-STGIKVWDSIISTGDDCLSFGPGM 231

The following BLAST results are available for this feature:
BLAST of CmaCh16G009320 vs. Swiss-Prot
Match NameE-valueIdentityDescription
PGLR2_PLAAC3.0e-1929.52Exopolygalacturonase (Fragment) OS=Platanus acerifolia GN=plaa2 PE=1 SV=1[more]
PGLR_MEDSA8.7e-1928.04Polygalacturonase OS=Medicago sativa PE=2 SV=1[more]
PGLR3_ARATH6.2e-1730.96Probable polygalacturonase At3g15720 OS=Arabidopsis thaliana GN=At3g15720 PE=1 S... [more]
PGLR_OENOR1.2e-1530.62Exopolygalacturonase (Fragment) OS=Oenothera organensis PE=2 SV=1[more]
PGLR_TOBAC2.6e-1529.67Polygalacturonase OS=Nicotiana tabacum GN=PG1 PE=2 SV=1[more]
BLAST of CmaCh16G009320 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L7H9_CUCSA3.4e-4648.54Uncharacterized protein OS=Cucumis sativus GN=Csa_3G063610 PE=3 SV=1[more]
W9RBH8_9ROSA2.3e-2634.76Uncharacterized protein OS=Morus notabilis GN=L484_014009 PE=3 SV=1[more]
A0A0D2Q1X5_GOSRA2.6e-2233.01Uncharacterized protein OS=Gossypium raimondii GN=B456_006G016500 PE=3 SV=1[more]
A5BTN5_VITVI2.2e-2133.17Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_027614 PE=3 SV=1[more]
A0A022RRP5_ERYGU1.1e-2032.41Uncharacterized protein OS=Erythranthe guttata GN=MIMGU_mgv1a019884mg PE=3 SV=1[more]
BLAST of CmaCh16G009320 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G35670.13.4e-2131.80 Pectin lyase-like superfamily protein[more]
AT5G27530.14.9e-2032.31 Pectin lyase-like superfamily protein[more]
AT2G26620.15.4e-1930.19 Pectin lyase-like superfamily protein[more]
AT3G15720.13.5e-1830.96 Pectin lyase-like superfamily protein[more]
AT5G44830.14.6e-1831.66 Pectin lyase-like superfamily protein[more]
BLAST of CmaCh16G009320 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700200928|gb|KGN56061.1|4.9e-4648.54hypothetical protein Csa_3G063610 [Cucumis sativus][more]
gi|778688362|ref|XP_011652730.1|4.9e-4648.54PREDICTED: exopolygalacturonase-like [Cucumis sativus][more]
gi|659096624|ref|XP_008449197.1|4.3e-4247.57PREDICTED: exopolygalacturonase-like [Cucumis melo][more]
gi|449463753|ref|XP_004149596.1|1.1e-4046.60PREDICTED: exopolygalacturonase-like [Cucumis sativus][more]
gi|703111902|ref|XP_010099972.1|3.3e-2634.76hypothetical protein L484_014009 [Morus notabilis][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR000743Glyco_hydro_28
IPR011050Pectin_lyase_fold/virulence
IPR012334Pectin_lyas_fold
Vocabulary: Molecular Function
TermDefinition
GO:0004650polygalacturonase activity
Vocabulary: Biological Process
TermDefinition
GO:0005975carbohydrate metabolic process
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0005982 starch metabolic process
biological_process GO:0005985 sucrose metabolic process
biological_process GO:0005975 carbohydrate metabolic process
cellular_component GO:0005575 cellular_component
molecular_function GO:0004650 polygalacturonase activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh16G009320.1CmaCh16G009320.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000743Glycoside hydrolase, family 28PFAMPF00295Glyco_hydro_28coord: 99..186
score: 2.2E-10coord: 21..95
score: 1.
IPR011050Pectin lyase fold/virulence factorunknownSSF51126Pectin lyase-likecoord: 11..183
score: 5.97
IPR012334Pectin lyase foldGENE3DG3DSA:2.160.20.10coord: 12..183
score: 1.8
NoneNo IPR availableunknownCoilCoilcoord: 187..191
scor
NoneNo IPR availablePANTHERPTHR31375FAMILY NOT NAMEDcoord: 9..183
score: 3.5

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmaCh16G009320Cp4.1LG14g07530Cucurbita pepo (Zucchini)cmacpeB345
CmaCh16G009320CsaV3_3G004490Cucumber (Chinese Long) v3cmacucB0381
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CmaCh16G009320Watermelon (97103) v2cmawmbB338
CmaCh16G009320Wax gourdcmawgoB0419
CmaCh16G009320Cucurbita maxima (Rimu)cmacmaB358
CmaCh16G009320Cucumber (Gy14) v1cgycmaB0029
CmaCh16G009320Cucurbita moschata (Rifu)cmacmoB323
CmaCh16G009320Cucurbita moschata (Rifu)cmacmoB345
CmaCh16G009320Wild cucumber (PI 183967)cmacpiB333
CmaCh16G009320Cucumber (Chinese Long) v2cmacuB327
CmaCh16G009320Melon (DHL92) v3.5.1cmameB290
CmaCh16G009320Watermelon (Charleston Gray)cmawcgB285
CmaCh16G009320Watermelon (97103) v1cmawmB300
CmaCh16G009320Bottle gourd (USVL1VR-Ls)cmalsiB317
CmaCh16G009320Cucumber (Gy14) v2cgybcmaB340
CmaCh16G009320Melon (DHL92) v3.6.1cmamedB343
CmaCh16G009320Silver-seed gourdcarcmaB0676
CmaCh16G009320Silver-seed gourdcarcmaB0819