CmaCh16G008610 (gene) Cucurbita maxima (Rimu)

Overview
NameCmaCh16G008610
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu))
DescriptionCoffea canephora DH200=94 genomic scaffold, scaffold_19
LocationCma_Chr16 : 5116609 .. 5120751 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAACGGGGTTAAGCGATCTGATGAGACTATGGAATGTAAAAATGCATTGGTAACAGAGTGTTTTGCCTTAGAGGGAAGCACTTGTGCGAGCAGTGGTGGACGAAGCGGACGCGAGAATGTCGGTTTGAATAATAGAAACATTGGTGAGAATCCAATTCTCCGAAAAAATTAGAATTTACTTGACCATGTCATCATCTTCAACCTTTAGTGGGAGAGATATTTGCCATAAAAGTTGGTCGAAATCCAAGCCATATCATGGCTCGATTTCTTCGTCAACTCTCTTCCTCACCTTCCCCGAAGCTAATGGATGAGTTTTGAAAGGATGAATGTGTATGCGTAGATATTCAATTTTTTCCTTCAAGCTCTTGGGTAGAGGTAGAATTCATGCAAAATGGAGGTTTATTGGGCAGGAGGATGGGATATCATTTTTCTTTCACTCTCTTTGTTCTAGAAGTAGTTGGTATAGGTTTGGTACATAATTTTTTAAACCCGATTCTTTTTAAAAACAATTAAAAATGACAATTTACACCCCCTATAAAAATACACCTAAAATTTAGAGAAAAGTTAACTTATTTATAAGATCACATGAAAATACGTCATATCTATGACTATCAGTGTCATATCCACCCTATGCCTTGACACATACATGTATCTCAAGAGTCTTGGTAAACTTTACTCTTCAATTATTCGTTCTATTTCTAATAACTTTTCTTCTCAAATTTATGAAATAATGTTACTATATATATTTTTAATAGAAATTATATTAAAAAAATAAAATTGATGTAGTTCGATCATATTTAATATCAATTATATTTTTAAAATTATCCTATGATATAAATTTTTAATTTCATTTTTAATAAAGGTATAATTTAAAATTTTGTTAGAACAAGTCGAAAATCGAAAATTTAAATATTTATTAAATTGAAACTTATAACATTTTTTTTAATATGTGAAGAAAAATTGAAATTTAAAAATAAAATGATAATATAGCACGTAACGCAACAGCCAAAAATTTCTCATATTCCATAAGATCTCGTTTCTGCAACTCCACATTGCCTGTGTCCAGAATGAATACGGTATTCTCTTCTTACTTCATCTTTGCTTCCTCCATTTAATTTCCCTGATTCTTTATGCTACTTCAATCGTACTGTTTGTGTTCTTTCTTATGTGAATTTGTGGTTTTCCATCGTTTTTTTCTTTTTAATTTCAATTCTATCGTATGCATTTGGTGCTCCGGTGTGTAGATGATTTGGATCGTAAATTTGACCTGACCATGGATGGATGAAAACATTGGCATCTATTTTGTTTTGTTTTGTTTTTTTTTTCTTACATCACCTTCTCTTGGACAAGAGACGTACCTATCTTGTTTGTTGAATTTTTTCATTTTTCATATACGTCGAGAAATGGTGATAGTTACGAAATCAATCTGTGCATCAATAGGCGTTGTTTTGAAGAAAGCAAGGATGCCAAAAAAGAGTAAAAGGAATGTGAATGTGGACGATGCCGTTGTAATTGATACTCTTATTGTTCTCTCTGGTGATCTTGCTCAAGTTTTGCGATGGTATGTAATTAAGGCCACTTTTATTTCGCTTTATCTAGTACTCATGTTATTTAATCTAATTTAGTTTAATGGAAATCTAGGTCACATTGGATTATTTCAAATGTACAGTAGGTTCGACTTCCGGCTGGTAGTTTTTCCAAACTCTTGGCTGGTTGTGATTACGAAGCCAAGGCCAACGATCCTATTTTGTTGCATCCAGCGACAGAGGCTAAGACATGTGCGGAGTCATTCAAGGAGGGGTGTCCGATTAATCAAATAAGGTATACTCCCTTCCTAGCATTGTGTATATTTATGGTCTAAATTTTGGAGTTTGATATTCTTTTGTCTGTGGCGTTTGGAGTGATGTATATGGTTGTTCTTAGCAGATTGTTTCCATGGTCACTCTTGGTACAAATGGCCTAAATTTTGGAGTTTCATAATTTATGTTAAGGAATTTTGAGTTAGAACTGAGGGATTTTTCCGAAGAGAAGCGCCTATCTGTGGTTGAGAAGGTTATGTTGTCTTCAAATGGCCATTTTTTATTTGATTTTACTTGGAAAGAATATTCTGTTCTCTCCTACTTGGTTTTATATACTAGACAAATTATTGCATAATTAGTTTCATGATAGTAGCTTCAGGAAAGTATCATTTATTGGCATTTTAATTAGCACTGGGCATCACATAGAAAGCTATATTCTCTTGCTTAATAATCCATATTTCAAGATGGGGGAAGGTTTTGTCAACCAAAGCATATCTTGAGATTGGTTATGACATTATAACCTTGGCAACCTTGGCCAAAAGTTTCGAGGTTCAAATTTCCATACTCACAATGGTTGAACTAAAAAGATAGATGGGGGTTCTCGATTTCTATTGTGATTCATATGCGCATTTAAATGCACGTGATTACCAACACAGATTTTAATTGTAAAAACAGTGACCTGGTCCAAGATCAAAATGGGTTTGCTCATGGTTCACTGCCTACTGTAACTGGGAAGCTTAGTGATGTTAGACCACTTTTGCGAGATAGCGTCGAGAACAACCAGAGAGATGCACAGCAGAAAAGAGAGAATAAATTGCAAAAAGGTGAACTTTTGGTGCCTTGCTTGCATAGTTGTAGCACACTCACCCAGCATATGCTTCTAATATTTTAAGTTAGAGGAGCGATGGCTCTATTAAAAGAATAGTTAAGAATGACTCATGTATTAATTAAGATAACCTCCTGAAAGATACCTACTAATAGTACTTGAAAAATAGTATTCGCTCAACATACCTACACTACTAACTGTTTGTATGAATTATTTCGTTGGCATGCTATCTAAGTTTATGCATGTTGGCCTTTGTTTTGAAGTTTATCATATTCCTATTCATAATGACCCTATCTTCCCACCAACCTCCTTGCATTTTGAAGTTGTCACTGGCGCTGCAATCAATTGGAGGTATGAAATAACTTCTCCTAAATATATTTCTTTCTTTATGGCTGTTCAGCAAAGAATTGAGGCTTATCTCATCTCCATGATGAGGCCATCATACCAAAAAGGGAACATGCCGTGTGGAGAATGGTTCTCTTACCTTTTTTTAGATTGATATTTGTTGGTTTAATTTTATTTTGTAACTAATTACTATCATGAATTCTTTCGTTGATATTATTGCTACTACTATTTTTGGTAAGAAGCAATTTCATACCAGAAAGGAAACATTCTATGCGGCACACGCTCTACTTTATTTGAGATTGATATATCTGTTGGTTCAGTTTTATCTTGTAAACAATTACTCTTATCTCACTGAAGTGCTCCTTTTCTTATGGTTTATGTTAAATTATTTGATAGACAGGACCCAGATAACCAATTGAAAACGGAGCAGGATGATCGTGGTCAGGAATTTGACATGCGTCAAGGACTAAATGTATGTCAGTTAAGCTTATTCAGGATCCGTGTTTTCTTGAGAATTAGATGTTATTTCATATGGGTGGACTATACTAAAGACTGACTACTTTTGTTTCTGTAGGTTGATCTGAGTTCAATCCTCTTTATTGAGTGGTGAGTTCAAAGTGCTGTTAATGATATCTGGCTCACCTAATTTGGTTATAAAGCTTCTACGAAAGGGTTTTCTTAATATATGAACTAAATATAATTGCAGATGGTTTTTTATTTGAATTGCTGATTTTGCAAATAGCACTACGGAGTTGTAGTTTCCGTTGCAACTTACCTACAATGTTAAATGCTCAATAAATTTTGACACTAAATGTTGTAGGATTAAGTGGTTATCTCTTGAAATTAGCTAGTTAGTGTAGGACCCTATGATTTTTCTGTATAGTTTTCAAATACCTTCCAGCGTGGATATTTCTATGTAATGTTATCATTCTTTGACCACTTGAATTGTAGATATCTTTTTATGCGGTGGATTTTCGGCCTGATAAAGTAAATTCAGAGAATAATAAGAATTTAATAATGCCATAAAACAATTGTTTAGAGTATCTAATTGTTCTGCTTCCGCTCTTATTAAATTAGAGAAACCATGCACTGAAAGACCCATTTCACTCAACATAACGACGTATGCATTTTCAGTTGGTGTCTCAACTTCTTCACTTTTTCCTGTGGATAG

mRNA sequence

ATGAACGGGGTTAAGCGATCTGATGAGACTATGGAATGTAAAAATGCATTGGTAACAGAGTGTTTTGCCTTAGAGGGAAGCACTTGTGCGAGCAGTGGTGGACGAAGCGGACGCGAGAATATCTCGTTTCTGCAACTCCACATTGCCTGTGTCCAGAATGAATACGGCGTTGTTTTGAAGAAAGCAAGGATGCCAAAAAAGAGTAAAAGGAATGTGAATGTGGACGATGCCGTTGTAATTGATACTCTTATTGTTCTCTCTGGTGATCTTGCTCAAGTTTTGCGATGGTCACATTGGATTATTTCAAATGCCAACGATCCTATTTTGTTGCATCCAGCGACAGAGGCTAAGACATGTGCGGAGTCATTCAAGGAGGGGTGTCCGATTAATCAAATAAGTGACCTGGTCCAAGATCAAAATGGGTTTGCTCATGGTTCACTGCCTACTGTAACTGGGAAGCTTAGTGATGTTAGACCACTTTTGCGAGATAGCGTCGAGAACAACCAGAGAGATGCACAGCAGAAAAGAGAGAATAAATTGCAAAAAGTTTATCATATTCCTATTCATAATGACCCTATCTTCCCACCAACCTCCTTGCATTTTGAAGTTGTCACTGGCGCTGCAATCAATTGGAGACAGGACCCAGATAACCAATTGAAAACGGAGCAGGATGATCGTGGTCAGGAATTTGACATGCGTCAAGGACTAAATGTTGATCTGAGTTCAATCCTCTTTATTGAGTGTTGGTGTCTCAACTTCTTCACTTTTTCCTGTGGATAG

Coding sequence (CDS)

ATGAACGGGGTTAAGCGATCTGATGAGACTATGGAATGTAAAAATGCATTGGTAACAGAGTGTTTTGCCTTAGAGGGAAGCACTTGTGCGAGCAGTGGTGGACGAAGCGGACGCGAGAATATCTCGTTTCTGCAACTCCACATTGCCTGTGTCCAGAATGAATACGGCGTTGTTTTGAAGAAAGCAAGGATGCCAAAAAAGAGTAAAAGGAATGTGAATGTGGACGATGCCGTTGTAATTGATACTCTTATTGTTCTCTCTGGTGATCTTGCTCAAGTTTTGCGATGGTCACATTGGATTATTTCAAATGCCAACGATCCTATTTTGTTGCATCCAGCGACAGAGGCTAAGACATGTGCGGAGTCATTCAAGGAGGGGTGTCCGATTAATCAAATAAGTGACCTGGTCCAAGATCAAAATGGGTTTGCTCATGGTTCACTGCCTACTGTAACTGGGAAGCTTAGTGATGTTAGACCACTTTTGCGAGATAGCGTCGAGAACAACCAGAGAGATGCACAGCAGAAAAGAGAGAATAAATTGCAAAAAGTTTATCATATTCCTATTCATAATGACCCTATCTTCCCACCAACCTCCTTGCATTTTGAAGTTGTCACTGGCGCTGCAATCAATTGGAGACAGGACCCAGATAACCAATTGAAAACGGAGCAGGATGATCGTGGTCAGGAATTTGACATGCGTCAAGGACTAAATGTTGATCTGAGTTCAATCCTCTTTATTGAGTGTTGGTGTCTCAACTTCTTCACTTTTTCCTGTGGATAG

Protein sequence

MNGVKRSDETMECKNALVTECFALEGSTCASSGGRSGRENISFLQLHIACVQNEYGVVLKKARMPKKSKRNVNVDDAVVIDTLIVLSGDLAQVLRWSHWIISNANDPILLHPATEAKTCAESFKEGCPINQISDLVQDQNGFAHGSLPTVTGKLSDVRPLLRDSVENNQRDAQQKRENKLQKVYHIPIHNDPIFPPTSLHFEVVTGAAINWRQDPDNQLKTEQDDRGQEFDMRQGLNVDLSSILFIECWCLNFFTFSCG
Homology
[Close]
BLAST of CmaCh16G008610 vs. TrEMBL
Match: A0A0A0L531_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G077680 PE=4 SV=1)

HSP 1 Score: 227.6 bits (579), Expect = 1.7e-56
Identity = 124/207 (59.90%), Postives = 138/207 (66.67%), Query Frame = 1 

Query: 47  HIACVQNEYGVVLKKARMPKKSKRNVNVDDAVVIDTLIVLSGDLAQVLRWSHWII----- 106
           H ACV NEYGVVLKKARM KK KRNVNVDD VVIDTLIVLSGDL QV+     +      
Sbjct: 49  HTACVDNEYGVVLKKARMTKKGKRNVNVDDGVVIDTLIVLSGDLVQVVATEVILPAGSFS 108

Query: 107 ---------SNANDPILLHPATEAKTCAESFKEGCPINQISDLVQDQNGFAHGSLPTVTG 166
                    S ANDP LLHP T AKTC ESFKEG  +NQ SDLV+DQNGFA GS+PT+TG
Sbjct: 109 KSLAGCDNESKANDPTLLHPTTAAKTCTESFKEGSQVNQTSDLVEDQNGFARGSVPTLTG 168

Query: 167 KLSDVRPLLRDSVENNQRDAQQKRENKLQKVYHIPIHNDPIFPPTSLHFEVVTGAAINWR 226
           KL+DVR LL+D+ ENNQ D  QKRE    K                   E V+ A INWR
Sbjct: 169 KLNDVRQLLQDNAENNQGDGHQKREKINCK-----------------KLEDVSDAGINWR 228

Query: 227 QDPDNQLKTEQDDRGQEFDMRQGLNVD 240
           QDPDNQLK EQDD GQEFD+++ +NVD
Sbjct: 229 QDPDNQLKKEQDDHGQEFDLQKVVNVD 238

[Close]
BLAST of CmaCh16G008610 vs. TrEMBL
Match: W9RDP1_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_002322 PE=4 SV=1)

HSP 1 Score: 66.6 bits (161), Expect = 5.0e-08
Identity = 45/137 (32.85%), Postives = 64/137 (46.72%), Query Frame = 1 

Query: 47  HIACVQNEYGVVLKKARMPKKSKRNVNVDDAVVIDTLIVLSGDLAQVLRWSHWIISNAND 106
           H A  +N+YG+VLKKARM KK K N NV +  +I+TL++LSGDL Q++       ++ + 
Sbjct: 56  HTAGFENDYGIVLKKARMTKKGKANSNVANGAMIETLVILSGDLVQLVAKGVLPPADGDS 115

Query: 107 PILLHPATEAKTCAESFKEGCPINQISDL----------------VQDQNGFAHGSLPTV 166
             L     E     ++  E C   ++  L                VQ  NGFA   +P  
Sbjct: 116 GNLAAKDAECVVDNKAPSEECVEYEVDKLINSDFNMKRTEHIRSSVQKMNGFAQAFMPAN 175

Query: 167 TGKLSDVRPLLRDSVEN 168
             K  + R L   S EN
Sbjct: 176 GRKDDEGRKLEPKSFEN 192

[Close]
BLAST of CmaCh16G008610 vs. TrEMBL
Match: D7T8B6_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_19s0090g00300 PE=4 SV=1)

HSP 1 Score: 66.6 bits (161), Expect = 5.0e-08
Identity = 56/209 (26.79%), Postives = 96/209 (45.93%), Query Frame = 1 

Query: 46  LHIACVQNEYGVVLKKARMPKKSKRNVNVDDAVVIDTLIVLSGDLAQVLRWSHWIISNAN 105
           LH AC+  +YG++LKKARM KK K   NV    +++TL++L+GDL QV+      +  ++
Sbjct: 47  LHTACLGKDYGIILKKARMIKKGKLEANVAHGGMVETLVILTGDLVQVVAKG---VQLSD 106

Query: 106 DPILLH-------------PATEA-KTCAESFKEG------CPINQISDLVQDQNGFAHG 165
           D I+ +             P+ E   T A+  K G        IN   + VQ++NGFAHG
Sbjct: 107 DDIVRNITGEDTEAVAGTIPSFECLGTEAKMLKPGNAAVHKKQINNTRNSVQNENGFAHG 166

Query: 166 SLPTVTGKLSDVRPLLRDSVENNQRDAQQKRENKLQKVYHIPIHNDPIFPPTSLHFEVVT 225
            + T +           D++ +   + + +R+        + I N           E   
Sbjct: 167 FMATPS----------EDNLMSKIVEHEVRRKEPSYLGSALEIENGKRDSKILAKSEEAP 226

Query: 226 GAAINWRQDPDNQLKTEQDDRGQEFDMRQ 235
               N RQ  D++++ +QD   Q+++  +
Sbjct: 227 SFPDNGRQVGDDRIQGKQDHSKQKYEFHR 242

[Close]
BLAST of CmaCh16G008610 vs. TrEMBL
Match: M5WMY8_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa004888mg PE=4 SV=1)

HSP 1 Score: 63.5 bits (153), Expect = 4.2e-07
Identity = 29/48 (60.42%), Postives = 38/48 (79.17%), Query Frame = 1 

Query: 47 HIACVQNEYGVVLKKARMPKKSKRNVNVDDAVVIDTLIVLSGDLAQVL 95
          + A V+NEYG+VLKKARM KK K + NV +  +IDTL++LSGDL QV+
Sbjct: 50 YTASVENEYGIVLKKARMTKKGKSDANVGNGTLIDTLVILSGDLVQVV 97

[Close]
BLAST of CmaCh16G008610 vs. TrEMBL
Match: A0A0J8FA28_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_4g088170 PE=4 SV=1)

HSP 1 Score: 63.5 bits (153), Expect = 4.2e-07
Identity = 46/144 (31.94%), Postives = 71/144 (49.31%), Query Frame = 1 

Query: 47  HIACVQNEYGVVLKKARMPKKSKRNVNVDDAVVIDTLIVLSGDLAQVLRWSHWI-ISNAN 106
           H A     YG+VLKKARM KK   N NV D+ +IDTL+VL+GDL QV+     +   N +
Sbjct: 52  HTASFDKGYGIVLKKARMIKKGTHNTNVSDSGLIDTLVVLAGDLVQVVAKGVMLSADNVS 111

Query: 107 DPILLH--------------PATEAKTCAESFKEGCPINQISDLVQDQNGFAHGSLPTVT 166
           +P                     EA + AE   E   +  +  L +D++ + H S   V+
Sbjct: 112 NPAACEFEGTVSGTIDSCRSSENEALSTAERRNEERQVG-VPMLQEDEDHYRHHS--EVS 171

Query: 167 GKLSDVRPLLRDSVENNQRDAQQK 176
            ++S V    R  ++NN+ + Q++
Sbjct: 172 KEVSKVNGSSRSLIDNNKLNVQKE 192

[Close]
BLAST of CmaCh16G008610 vs. NCBI nr
Match: gi|449470441|ref|XP_004152925.1| (PREDICTED: polyadenylate-binding protein-interacting protein 4 [Cucumis sativus])

HSP 1 Score: 227.6 bits (579), Expect = 2.4e-56
Identity = 124/207 (59.90%), Postives = 138/207 (66.67%), Query Frame = 1 

Query: 47  HIACVQNEYGVVLKKARMPKKSKRNVNVDDAVVIDTLIVLSGDLAQVLRWSHWII----- 106
           H ACV NEYGVVLKKARM KK KRNVNVDD VVIDTLIVLSGDL QV+     +      
Sbjct: 49  HTACVDNEYGVVLKKARMTKKGKRNVNVDDGVVIDTLIVLSGDLVQVVATEVILPAGSFS 108

Query: 107 ---------SNANDPILLHPATEAKTCAESFKEGCPINQISDLVQDQNGFAHGSLPTVTG 166
                    S ANDP LLHP T AKTC ESFKEG  +NQ SDLV+DQNGFA GS+PT+TG
Sbjct: 109 KSLAGCDNESKANDPTLLHPTTAAKTCTESFKEGSQVNQTSDLVEDQNGFARGSVPTLTG 168

Query: 167 KLSDVRPLLRDSVENNQRDAQQKRENKLQKVYHIPIHNDPIFPPTSLHFEVVTGAAINWR 226
           KL+DVR LL+D+ ENNQ D  QKRE    K                   E V+ A INWR
Sbjct: 169 KLNDVRQLLQDNAENNQGDGHQKREKINCK-----------------KLEDVSDAGINWR 228

Query: 227 QDPDNQLKTEQDDRGQEFDMRQGLNVD 240
           QDPDNQLK EQDD GQEFD+++ +NVD
Sbjct: 229 QDPDNQLKKEQDDHGQEFDLQKVVNVD 238

[Close]
BLAST of CmaCh16G008610 vs. NCBI nr
Match: gi|659126900|ref|XP_008463420.1| (PREDICTED: polyadenylate-binding protein-interacting protein 4-like isoform X1 [Cucumis melo])

HSP 1 Score: 222.6 bits (566), Expect = 7.8e-55
Identity = 123/207 (59.42%), Postives = 135/207 (65.22%), Query Frame = 1 

Query: 47  HIACVQNEYGVVLKKARMPKKSKRNVNVDDAVVIDTLIVLSGDLAQVLRWSHWII----- 106
           H ACV NEYGVVLKKARM KK KRNVNVDD VVIDTLIVLSGDL QV+     +      
Sbjct: 49  HTACVDNEYGVVLKKARMTKKGKRNVNVDDGVVIDTLIVLSGDLVQVVATEVILPAGSFP 108

Query: 107 ---------SNANDPILLHPATEAKTCAESFKEGCPINQISDLVQDQNGFAHGSLPTVTG 166
                    S ANDP LLHP T AKTC ESFKEG  +NQ SDLV+DQNGFA  S PTVTG
Sbjct: 109 KSLAGCDNESKANDPTLLHPTTAAKTCTESFKEGSQVNQTSDLVEDQNGFARSSAPTVTG 168

Query: 167 KLSDVRPLLRDSVENNQRDAQQKRENKLQKVYHIPIHNDPIFPPTSLHFEVVTGAAINWR 226
           KL+DVR LL+D+ ENNQ D  QKRE    K                   E V+ A INWR
Sbjct: 169 KLNDVRQLLQDNAENNQGDGHQKREKINCK-----------------KLEDVSDAGINWR 228

Query: 227 QDPDNQLKTEQDDRGQEFDMRQGLNVD 240
           QD DNQLK EQDD GQEFD+++ +NVD
Sbjct: 229 QDSDNQLKKEQDDHGQEFDLQKVVNVD 238

[Close]
BLAST of CmaCh16G008610 vs. NCBI nr
Match: gi|659126902|ref|XP_008463421.1| (PREDICTED: polyadenylate-binding protein-interacting protein 4-like isoform X2 [Cucumis melo])

HSP 1 Score: 222.6 bits (566), Expect = 7.8e-55
Identity = 123/207 (59.42%), Postives = 135/207 (65.22%), Query Frame = 1 

Query: 47  HIACVQNEYGVVLKKARMPKKSKRNVNVDDAVVIDTLIVLSGDLAQVLRWSHWII----- 106
           H ACV NEYGVVLKKARM KK KRNVNVDD VVIDTLIVLSGDL QV+     +      
Sbjct: 49  HTACVDNEYGVVLKKARMTKKGKRNVNVDDGVVIDTLIVLSGDLVQVVATEVILPAGSFP 108

Query: 107 ---------SNANDPILLHPATEAKTCAESFKEGCPINQISDLVQDQNGFAHGSLPTVTG 166
                    S ANDP LLHP T AKTC ESFKEG  +NQ SDLV+DQNGFA  S PTVTG
Sbjct: 109 KSLAGCDNESKANDPTLLHPTTAAKTCTESFKEGSQVNQTSDLVEDQNGFARSSAPTVTG 168

Query: 167 KLSDVRPLLRDSVENNQRDAQQKRENKLQKVYHIPIHNDPIFPPTSLHFEVVTGAAINWR 226
           KL+DVR LL+D+ ENNQ D  QKRE    K                   E V+ A INWR
Sbjct: 169 KLNDVRQLLQDNAENNQGDGHQKREKINCK-----------------KLEDVSDAGINWR 228

Query: 227 QDPDNQLKTEQDDRGQEFDMRQGLNVD 240
           QD DNQLK EQDD GQEFD+++ +NVD
Sbjct: 229 QDSDNQLKKEQDDHGQEFDLQKVVNVD 238

[Close]
BLAST of CmaCh16G008610 vs. NCBI nr
Match: gi|659126904|ref|XP_008463422.1| (PREDICTED: polyadenylate-binding protein-interacting protein 4-like isoform X3 [Cucumis melo])

HSP 1 Score: 156.8 bits (395), Expect = 5.3e-35
Identity = 82/138 (59.42%), Postives = 92/138 (66.67%), Query Frame = 1 

Query: 102 SNANDPILLHPATEAKTCAESFKEGCPINQISDLVQDQNGFAHGSLPTVTGKLSDVRPLL 161
           S ANDP LLHP T AKTC ESFKEG  +NQ SDLV+DQNGFA  S PTVTGKL+DVR LL
Sbjct: 67  SKANDPTLLHPTTAAKTCTESFKEGSQVNQTSDLVEDQNGFARSSAPTVTGKLNDVRQLL 126

Query: 162 RDSVENNQRDAQQKRENKLQKVYHIPIHNDPIFPPTSLHFEVVTGAAINWRQDPDNQLKT 221
           +D+ ENNQ D  QKRE    K                   E V+ A INWRQD DNQLK 
Sbjct: 127 QDNAENNQGDGHQKREKINCK-----------------KLEDVSDAGINWRQDSDNQLKK 186

Query: 222 EQDDRGQEFDMRQGLNVD 240
           EQDD GQEFD+++ +NVD
Sbjct: 187 EQDDHGQEFDLQKVVNVD 187

[Close]
BLAST of CmaCh16G008610 vs. NCBI nr
Match: gi|1021468907|ref|XP_016183199.1| (PREDICTED: uncharacterized protein LOC107625135 [Arachis ipaensis])

HSP 1 Score: 72.8 bits (177), Expect = 1.0e-09
Identity = 62/205 (30.24%), Postives = 93/205 (45.37%), Query Frame = 1 

Query: 47  HIACVQNEYGVVLKKARMPKKSKRNVNVDDAVVIDTLIVLSGDLAQVLRWSHWI------ 106
           H A V ++YG+VLKKARM KK K   NV    ++DTL+VLS DL QV+     +      
Sbjct: 51  HTASVDSDYGIVLKKARMTKKGKGKTNVGKEDLVDTLVVLSRDLVQVVAKEVMLPTKSFG 110

Query: 107 --ISNANDPILLH-------PATEAKTCAESFKEGCPINQISDLVQDQNGFAHGSLPTVT 166
             I++ +   ++H       P  E +   +S  +   +NQ    VQ++NGF H  LP  T
Sbjct: 111 GNITSDDGETVMHDMCSRESPTCEVENHMKSLTDVKHVNQSRTPVQNENGFTH-CLPPST 170

Query: 167 GKLSDVRPLLRDSVENNQRDAQQKRENKLQKVYHIPIHNDPIFPPTSL-HFEVVTGAAIN 226
             +   R  L     N  R + +    K  K              T++   E  +G++IN
Sbjct: 171 AAIDFERNKL---PVNQMRTSTEVDCGKTDK--------------TNIGEIEAYSGSSIN 230

Query: 227 WRQDPDNQLKTEQDDRGQEFDMRQG 236
            RQ  D+  K   DD  ++ +  QG
Sbjct: 231 CRQAGDDNSKRNADDFREKPEFVQG 237

The following BLAST results are available for this feature:
BLAST of CmaCh16G008610 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CmaCh16G008610 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L531_CUCSA1.7e-5659.90Uncharacterized protein OS=Cucumis sativus GN=Csa_3G077680 PE=4 SV=1[more]
W9RDP1_9ROSA5.0e-0832.85Uncharacterized protein OS=Morus notabilis GN=L484_002322 PE=4 SV=1[more]
D7T8B6_VITVI5.0e-0826.79Putative uncharacterized protein OS=Vitis vinifera GN=VIT_19s0090g00300 PE=4 SV=... [more]
M5WMY8_PRUPE4.2e-0760.42Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa004888mg PE=4 SV=1[more]
A0A0J8FA28_BETVU4.2e-0731.94Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_4g088170 PE=4 S... [more]
BLAST of CmaCh16G008610 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CmaCh16G008610 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449470441|ref|XP_004152925.1|2.4e-5659.90PREDICTED: polyadenylate-binding protein-interacting protein 4 [Cucumis sativus][more]
gi|659126900|ref|XP_008463420.1|7.8e-5559.42PREDICTED: polyadenylate-binding protein-interacting protein 4-like isoform X1 [... [more]
gi|659126902|ref|XP_008463421.1|7.8e-5559.42PREDICTED: polyadenylate-binding protein-interacting protein 4-like isoform X2 [... [more]
gi|659126904|ref|XP_008463422.1|5.3e-3559.42PREDICTED: polyadenylate-binding protein-interacting protein 4-like isoform X3 [... [more]
gi|1021468907|ref|XP_016183199.1|1.0e-0930.24PREDICTED: uncharacterized protein LOC107625135 [Arachis ipaensis][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh16G008610.1CmaCh16G008610.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableunknownCoilCoilcoord: 162..182
scor
NoneNo IPR availablePANTHERPTHR12854ATAXIN 2-RELATEDcoord: 46..93
score: 8.0
NoneNo IPR availablePANTHERPTHR12854:SF12SUBFAMILY NOT NAMEDcoord: 46..93
score: 8.0

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmaCh16G008610Cucsa.059890Cucumber (Gy14) v1cgycmaB0080
CmaCh16G008610Cla005304Watermelon (97103) v1cmawmB298
CmaCh16G008610Csa3G077680Cucumber (Chinese Long) v2cmacuB328
CmaCh16G008610MELO3C025386Melon (DHL92) v3.5.1cmameB299
CmaCh16G008610ClCG10G005460Watermelon (Charleston Gray)cmawcgB283
CmaCh16G008610CSPI03G05180Wild cucumber (PI 183967)cmacpiB334
CmaCh16G008610Lsi05G006040Bottle gourd (USVL1VR-Ls)cmalsiB315
CmaCh16G008610MELO3C025386.2Melon (DHL92) v3.6.1cmamedB348
CmaCh16G008610CsaV3_3G005190Cucumber (Chinese Long) v3cmacucB0382
CmaCh16G008610Cla97C10G189700Watermelon (97103) v2cmawmbB336
CmaCh16G008610Bhi11G000488Wax gourdcmawgoB0421
CmaCh16G008610CsGy3G005250Cucumber (Gy14) v2cgybcmaB341
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CmaCh16G008610Silver-seed gourdcarcmaB0946
CmaCh16G008610Silver-seed gourdcarcmaB1243
CmaCh16G008610Cucurbita maxima (Rimu)cmacmaB041
CmaCh16G008610Cucurbita maxima (Rimu)cmacmaB339
CmaCh16G008610Cucurbita maxima (Rimu)cmacmaB350
CmaCh16G008610Cucurbita moschata (Rifu)cmacmoB317
CmaCh16G008610Cucurbita moschata (Rifu)cmacmoB324
CmaCh16G008610Cucurbita moschata (Rifu)cmacmoB328
CmaCh16G008610Cucurbita moschata (Rifu)cmacmoB337
CmaCh16G008610Melon (DHL92) v3.5.1cmameB292
CmaCh16G008610Watermelon (Charleston Gray)cmawcgB294
CmaCh16G008610Watermelon (Charleston Gray)cmawcgB298
CmaCh16G008610Cucurbita pepo (Zucchini)cmacpeB337
CmaCh16G008610Cucurbita pepo (Zucchini)cmacpeB350
CmaCh16G008610Cucurbita pepo (Zucchini)cmacpeB356
CmaCh16G008610Cucurbita pepo (Zucchini)cmacpeB362