CmaCh16G008270 (gene) Cucurbita maxima (Rimu)
The following sequences are available for this feature:
Legend: exonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ACCCTTTTAAGATATAGTTTGGTTGATTCAATTCAACAGTTAAACATATCTTATCATTTTGAAAATGAGATTGATCAAGTCTTAGAAAACATTTATGCAAACTATAGAGACTTCACAAGTATTGATGGCGATGACGATCTTCACACTGTCTTTCTTTTATTTCGATTGCTTAGACAACAAGGTTATAAAATTCTATGTGGTAAGTTTATTCATATATAATAACTCTTAAACTATTGTTTTATAATCATTTGGAACCCGTGAAATAAAAAAATTATACAATGGGACTTTGAAAGATATTGTAGGTAAACAAAGTTGTTTATGAAGCAAATTCTAAATAACTAATAATGGTTGTTTTTGTGCACATGAATTTGGAGTAGACATATTTACCAAATTTGTAGAAAATAATGGAAAATTCAAAGAATCACCGGGAAAAGATGCAAGAGGAATATTAAGTCTATATGAAGCGGCACATATGAGGGTGCACGGAGAAAATATCCTTGAAGAAGCTCTTGATTTTAGTGTCAAACATCTAAGAGATGTTATAACCAACTCAAACACCAAATTTTCTGCTCAAGTTCACAATGCCTTGATTAGATGTCAATGTATCAAGAAGATTCTTCCCATTCTCAAACTTTGCTTGCTTTTTCCAAATTGGATTTCAACACTTCATCCAAAGGAGTGGAAGGAACTCACGAGGTATATATTTATTTGTCATATTTAACCTATAAAATTAAATTTTAGGTTTATTGGTACTATTTATTTTAAATTATATGCTATTTTTTTTCTCTACATTCTTATTTACATATTTTATATTTTATAAGTGGTGGAAATATTTGAACGTCGAAACAAATTATTCTTATGCAAGAGATAGAATTATTGAGTGCTACTTTTGAACATTGGGGGCGTACTTTGAACCTCAATTAAATGTTGGAAGGAAAATATTAACCAAAGTGATAGCCATTTCTTCAATTTTAGATGATACCTATGGAACATTTGAAGAACTCCAAGTCTTCACTTGAACAATTCAAAGGTCATTTGAATTCATCCCTATGGATAAAGATCTTAGCTTTAAAAGCTTGATTTACATACTAATAAATTTATTGTTTATCCTTAAAAATGGAAAGGAGAAATATAAACACTTTTTTCATCTTTCAAAATTTATATATAAGAATAATCATATTAGTGGAAAGAAATTTTTTATGAACCATGATGTTGTTGAATTTTCTGATGGGATAGAAGCATGGTCAGTATACTCCTAGAGTACATGAAACCTTTATATTTAGCAATGTTAAATCTTTATAAAGAAATAGATAAGGATGAAAGTTCACTTCATATTCATACCAGAAGAAGTAAGCTTTCTTTGTCTCCCTCTCCTATCTTCTTGCCTTCCGTTTTATACATATAAATAAAAGTTATTATTTAGTTTATTTTTACAGATAAAAAAGCTAGCTGGATCATACTTTAAAAGAAACTAAATGGTTAAACCAAAATTTAAAGAGTACATGTGCATAGCTCAAGTTATTCCTTGGTTATAAGCATTTCACTCTTGGGTATGAGTGACATGGTAACAAATAAGGTAATTGAATGGTTTTCTAGAAGACTTAAAGTTATTAAAGCCGCAACATTAATTGCTAGACTCATGGACGACCTCGTTTCCCACAAGGTACATATTGTTTACTATCCTTCATAGCAGCACAAACAAAAGTAAACTATATTTATTGACATGTTTTTCTTTTTCAGTTTGAGCAACAAAGAGAACACGTTGCTTCGACAGTTGAATGTTACATGGAACAATATGATTGTTCAGAGAGCGAAGCTTGCGTTGAACTTCATAAGCAAGTGGTTGATGCATGGAAGGACACAAATGAAGAATGTCTTCATCCAATATGTTCCAATGCCTATTCTTATGCGGGTTCGTGAATGTTTCTAGAGTTATAAACCTTCTTTATTTGGATGAGGATGGATATGCAAATGCAAAGGGTCGAACAAAGTTTCTTATCGAATCTCTTCTTGTCAATCCAATGCGTGGTTGAATATATTTTGCAACAAGAAGGTTTGTGAGACCCAAAGTTTAGACTTAACCTAAGCCTTTTGTCTTGGGAATGATGGTTAGAGTGTCTTGGCCACTCCCACATGTCTAAAGTTAGATTTTTTTTTTTTTTTTTTCCTCTTATTTTGTAATCACACAAGCAATTCAATTTGGTCACATAAAAAAAAATCTATAATAATAATAATAATAAATTTACTGCCTCTCATTCTTTAGTCAATTTTAGTTTCAATATCAAATTAATGTCACAATTGGTCTAGGACTATTTTTAAGCCTCACACAGAGTCGTACATAGTGATGCTTCACGGGATGGTTGTAGATCTTCTTCGTCCTCACCTTCTCGATTTCTACGTTTGATTTTCTTTAGTCATGCATAATTTGAACACGTACATTTATGAATAACTTTCATTTATTTCTTTTTCGGTTTTGACTACATGAACATGTACGAAACCATAAATAAGTTTTGGCATATAATCACAATTGTAACAGTGGGTTAAGGAGTTAGGAATCCTTTTAACTTTTTCTTTTATTTTTTTAAGTTTGATGAGTTTTATTAAGGATTTATGGGATTAAGTCATGTCCCAAATTTAGAGGTTTTGAATCTTCAACTATGCCTAAAAAGAAAAAATGAAAATGAAAACAAATAAAATAAAATAAAATAAATAAATGAAGGATGAAAATCTAATAAAATTTAAATCAAATAAGACAACAAAATCAAAACTAATGCAAAATAAAATCTAATTATAAGACCATGTTGATTAAATTTAAATTTATTACAAACGGAGAAAATTGTTCGAGATATAATTATAAAACATAGATTGACGCTTTGGTGTGGAGAGGCACTGAACTGGTCACCAGTCAAAAAACATAAAATGGAAGAGGAAAACAAAAGATAAAAAAAAGAGGGGTTAAGGTTTGAGAGGAAGAAGAAGATGAGGAAAAATGCTAAATCCAATGAGAGACAGCTAAATTTGACCGAGAATCCTTCACAAAAAAACTCTCACGAGATTCATTATAGCCACTGAATTCACTCGATTTCATCAAAAAAAAAAAAATGAAGAATAACAAAAGGTTAGTTTTAGGTTTTAGATTTTTGATTTTTCTCGGGATTCACGAGTTTTTTATGGAATTAGTATATGTAATTTTAGTATATTGATCTTGGAGTATTTTCCCACATGTGTGAGCATGAGTCCTCACGTAATTCCCACCCCCTAGACTCATTATAGTCGAACTAGCTGTCCATAGCGACGTTTGGAGGTCACCAGACCCCTTGAGTGTCATGCAAGGCAAGACCACCACCATCATCATAGTATACGATGGGGGAGTATCCCAGTGTAATATGAACACACAAAATGCATGAGGTCCTTATAGTTTTCATCTTTAAATCATCTTTATGACACAACCCTATACACCGTTCACATGTTAATATAAGAAACATGCATGCATTGGCCTTCATACATTCATTATCATCAACATTAACTAGGGTTGTGTCTTTGAAAACTCGTCATCATAATGTATTGTAGCATTTAATACATGCACATTATCATCATGTCACACCTCATACGGCTCCTCATTCAATTATTTCGAAGTCATTTGATCCTTTCCCTCGTTCGAGAATCTCCTCCCCTCTTCCATTCTGTCCCGAAGAGTGATCCGGACCAATTCAGTCACGTTTTCATTCCTTTGGAATCTTGACTTTTCTACGTCATTTTTATTTACTTATTTTTCCCTCTCTTTTTTCAGTGTTATGATGATTTTGATTGGGAAGTTCAAGTGGCAAAAAGTATTTAGTCAAACTTGGTGAGATGACAGAATCCATAAATATTATTCAATAAGCTTTGGAAGAAATTCTCGGGGACCTTATGAAAATTTAGAAATACGATCTTTTGATCGAGGACAGTCTCCAGAATGGAATGACTTTGACTATCAATTCATTAGTAAAAAAACTTCGCCAACTTTTGAATCGGCGAAACAAGAACTTTATGCGAGAGTCTAAGCCCCATGTACATCATCACATCATTATCTAATGTCATCAAGTCATCATATAGTATCATCACATCATCATATAACATAAAGCATAAATGACACGTGAAAGACCCACTAGGCACGTGTTGTCATGCATAACACAAGTCTTCTGATCGAGCTGATAGTAAGGTCATTTACTTGGTTGGCTTAGGCCGAACCTACTACGACTCGTTGATGTTAGCTTAGCGTTGTTCTGTGAAATTTAATTCTACTTGATTTGATGAATGATTCCAGGAATGGCTTTCTGAGAATAAGCTCCCCTTTTACACATGGTTGATACAAATCTTGAAATTACAGATGATAGTAAGGCAATGATGGAAGATGATTGCTGGACACATGCAGCAGTTTATTGTCCTTCATCGAGATACCATTCCCTCACACGCAAATCAGATCACATGCAGCAGAAGGAGCATTTTACTGTCCTTCCATCGATCTAGCTTATCATCGTAATATTTTTACAGATCGAGCCAAGCACAGCCTTCGAAATCACGGCCATCGATCGATCAATCGAACACGAACAGCATCGTCGTCGCAAATCCGAACGTCTGCAGGGCATCAGAATTCATAATCTGAGCGGTATATATAGAGTTTGAGAAAGAGATCGCCTCACCAAAAGATTGATCTGATGCAATGTCTTGCTGAGTTGCCTGTGCGTGATGGCCAATGGAGGAGACATTGAATAAAACAAAAAGCATCGCCTCCGTAATCGGAAGGGCGAGACGATTTGGCCGATCAATTGAAGGATGCCGAGGCCGAGGAGAGAGATGCAGAGAAACCGATAAGAATAAGAAACTTTATTTATTTATTTATTTATTATTATTATTTTTACACTTTTATTTTATATTTTTCTCGAGTTTCTAAATTTTTTTTAAGCATCTTTAAAATTCTCAATGAAATCTTAGAAGGTTAA ACCCTTTTAAGATATAGTTTGGTTGATTCAATTCAACAGTTAAACATATCTTATCATTTTGAAAATGAGATTGATCAAGTCTTAGAAAACATTTATGCAAACTATAGAGACTTCACAAGTATTGATGGCGATGACGATCTTCACACTGTCTTTCTTTTATTTCGATTGCTTAGACAACAAGGTTATAAAATTCTATGTGACATATTTACCAAATTTGTAGAAAATAATGGAAAATTCAAAGAATCACCGGGAAAAGATGCAAGAGGAATATTAAGTCTATATGAAGCGGCACATATGAGGGTGCACGGAGAAAATATCCTTGAAGAAGCTCTTGATTTTAGTGTCAAACATCTAAGAGATGTTATAACCAACTCAAACACCAAATTTTCTGCTCAAGTTCACAATGCCTTGATTAGATGTCAATGTATCAAGAAGATTCTTCCCATTCTCAAACTTTGCTTGCTTTTTCCAAATTGGATTTCAACACTTCATCCAAAGGAGTGGAAGGAACTCACGAGAAGACTTAAAGTTATTAAAGCCGCAACATTAATTGCTAGACTCATGGACGACCTCGTTTCCCACAAGTTTGAGCAACAAAGAGAACACGTTGCTTCGACAGTTGAATGTTACATGGAACAATATGATTGTTCAGAGAGCGAAGCTTGCGTTGAACTTCATAAGCAAGTGGTTGATGCATGGAAGGACACAAATGAAGAATGTCTTCATCCAATATGTTCCAATGCCTATTCTTATGCGGATGATAGTAAGGCAATGATGGAAGATGATTGCTGGACACATGCAGCACTTATCATCGTAATATTTTTACAGATCGAGCCAAGCACAGCCTTCGAAATCACGGCCATCGATCGATCAATCGAACACGAACAGCATCGTCGTCGCAAATCCGAACGTCTGCAGGGCATCAGAATTCATAATCTGAGCGAAGGTTAA ACCCTTTTAAGATATAGTTTGGTTGATTCAATTCAACAGTTAAACATATCTTATCATTTTGAAAATGAGATTGATCAAGTCTTAGAAAACATTTATGCAAACTATAGAGACTTCACAAGTATTGATGGCGATGACGATCTTCACACTGTCTTTCTTTTATTTCGATTGCTTAGACAACAAGGTTATAAAATTCTATGTGACATATTTACCAAATTTGTAGAAAATAATGGAAAATTCAAAGAATCACCGGGAAAAGATGCAAGAGGAATATTAAGTCTATATGAAGCGGCACATATGAGGGTGCACGGAGAAAATATCCTTGAAGAAGCTCTTGATTTTAGTGTCAAACATCTAAGAGATGTTATAACCAACTCAAACACCAAATTTTCTGCTCAAGTTCACAATGCCTTGATTAGATGTCAATGTATCAAGAAGATTCTTCCCATTCTCAAACTTTGCTTGCTTTTTCCAAATTGGATTTCAACACTTCATCCAAAGGAGTGGAAGGAACTCACGAGAAGACTTAAAGTTATTAAAGCCGCAACATTAATTGCTAGACTCATGGACGACCTCGTTTCCCACAAGTTTGAGCAACAAAGAGAACACGTTGCTTCGACAGTTGAATGTTACATGGAACAATATGATTGTTCAGAGAGCGAAGCTTGCGTTGAACTTCATAAGCAAGTGGTTGATGCATGGAAGGACACAAATGAAGAATGTCTTCATCCAATATGTTCCAATGCCTATTCTTATGCGGATGATAGTAAGGCAATGATGGAAGATGATTGCTGGACACATGCAGCACTTATCATCGTAATATTTTTACAGATCGAGCCAAGCACAGCCTTCGAAATCACGGCCATCGATCGATCAATCGAACACGAACAGCATCGTCGTCGCAAATCCGAACGTCTGCAGGGCATCAGAATTCATAATCTGAGCGAAGGTTAA TLLRYSLVDSIQQLNISYHFENEIDQVLENIYANYRDFTSIDGDDDLHTVFLLFRLLRQQGYKILCDIFTKFVENNGKFKESPGKDARGILSLYEAAHMRVHGENILEEALDFSVKHLRDVITNSNTKFSAQVHNALIRCQCIKKILPILKLCLLFPNWISTLHPKEWKELTRRLKVIKAATLIARLMDDLVSHKFEQQREHVASTVECYMEQYDCSESEACVELHKQVVDAWKDTNEECLHPICSNAYSYADDSKAMMEDDCWTHAALIIVIFLQIEPSTAFEITAIDRSIEHEQHRRRKSERLQGIRIHNLSEG
BLAST of CmaCh16G008270 vs. Swiss-Prot
Match: GCSY1_CUCME ((+)-gamma-cadinene synthase OS=Cucumis melo PE=1 SV=1) HSP 1 Score: 153.3 bits (386), Expect = 4.4e-36 Identity = 100/226 (44.25%), Postives = 136/226 (60.18%), Query Frame = 1
BLAST of CmaCh16G008270 vs. Swiss-Prot
Match: SAST_SANAL (Probable sesquiterpene synthase OS=Santalum album GN=SesquiTPS1 PE=3 SV=1) HSP 1 Score: 147.9 bits (372), Expect = 1.9e-34 Identity = 85/216 (39.35%), Postives = 127/216 (58.80%), Query Frame = 1
BLAST of CmaCh16G008270 vs. Swiss-Prot
Match: TPSGD_VITVI ((-)-germacrene D synthase OS=Vitis vinifera GN=VIT_19s0014g04930 PE=1 SV=1) HSP 1 Score: 142.5 bits (358), Expect = 7.8e-33 Identity = 89/224 (39.73%), Postives = 126/224 (56.25%), Query Frame = 1
BLAST of CmaCh16G008270 vs. Swiss-Prot
Match: SPISS_SANSP (Sesquiterpene synthase OS=Santalum spicatum PE=2 SV=1) HSP 1 Score: 140.2 bits (352), Expect = 3.9e-32 Identity = 84/216 (38.89%), Postives = 126/216 (58.33%), Query Frame = 1
BLAST of CmaCh16G008270 vs. Swiss-Prot
Match: SPIST_SANSP (Probable sesquiterpene synthase OS=Santalum spicatum GN=SesquiTPS PE=3 SV=1) HSP 1 Score: 139.4 bits (350), Expect = 6.6e-32 Identity = 83/216 (38.43%), Postives = 126/216 (58.33%), Query Frame = 1
BLAST of CmaCh16G008270 vs. TrEMBL
Match: U5FEP9_POPTR (Uncharacterized protein (Fragment) OS=Populus trichocarpa GN=POPTR_0019s06210g PE=3 SV=1) HSP 1 Score: 168.3 bits (425), Expect = 1.5e-38 Identity = 96/245 (39.18%), Postives = 146/245 (59.59%), Query Frame = 1
BLAST of CmaCh16G008270 vs. TrEMBL
Match: Q66PX8_CUCSA (Beta-caryophyllene synthase OS=Cucumis sativus PE=2 SV=1) HSP 1 Score: 164.1 bits (414), Expect = 2.8e-37 Identity = 86/143 (60.14%), Postives = 110/143 (76.92%), Query Frame = 1
BLAST of CmaCh16G008270 vs. TrEMBL
Match: A0A0A0L2I8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G097540 PE=3 SV=1) HSP 1 Score: 162.5 bits (410), Expect = 8.2e-37 Identity = 105/235 (44.68%), Postives = 138/235 (58.72%), Query Frame = 1
BLAST of CmaCh16G008270 vs. TrEMBL
Match: A0A0A0L579_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G097040 PE=3 SV=1) HSP 1 Score: 161.4 bits (407), Expect = 1.8e-36 Identity = 85/143 (59.44%), Postives = 109/143 (76.22%), Query Frame = 1
BLAST of CmaCh16G008270 vs. TrEMBL
Match: A0A0B4VEV4_CUCME (Sesquiterpene synthase Tps1 OS=Cucumis melo PE=2 SV=1) HSP 1 Score: 158.3 bits (399), Expect = 1.5e-35 Identity = 80/143 (55.94%), Postives = 107/143 (74.83%), Query Frame = 1
BLAST of CmaCh16G008270 vs. TAIR10
Match: AT5G23960.1 (AT5G23960.1 terpene synthase 21) HSP 1 Score: 104.4 bits (259), Expect = 1.3e-22 Identity = 54/132 (40.91%), Postives = 86/132 (65.15%), Query Frame = 1
BLAST of CmaCh16G008270 vs. TAIR10
Match: AT3G29410.1 (AT3G29410.1 Terpenoid cyclases/Protein prenyltransferases superfamily protein) HSP 1 Score: 103.6 bits (257), Expect = 2.3e-22 Identity = 53/139 (38.13%), Postives = 82/139 (58.99%), Query Frame = 1
BLAST of CmaCh16G008270 vs. TAIR10
Match: AT3G14490.1 (AT3G14490.1 Terpenoid cyclases/Protein prenyltransferases superfamily protein) HSP 1 Score: 99.8 bits (247), Expect = 3.3e-21 Identity = 68/215 (31.63%), Postives = 109/215 (50.70%), Query Frame = 1
BLAST of CmaCh16G008270 vs. TAIR10
Match: AT4G13300.1 (AT4G13300.1 terpenoid synthase 13) HSP 1 Score: 98.6 bits (244), Expect = 7.3e-21 Identity = 46/116 (39.66%), Postives = 77/116 (66.38%), Query Frame = 1
BLAST of CmaCh16G008270 vs. TAIR10
Match: AT3G29110.1 (AT3G29110.1 Terpenoid cyclases/Protein prenyltransferases superfamily protein) HSP 1 Score: 98.6 bits (244), Expect = 7.3e-21 Identity = 57/139 (41.01%), Postives = 86/139 (61.87%), Query Frame = 1
BLAST of CmaCh16G008270 vs. NCBI nr
Match: gi|566233714|ref|XP_006371218.1| (hypothetical protein POPTR_0019s06210g, partial [Populus trichocarpa]) HSP 1 Score: 168.3 bits (425), Expect = 2.1e-38 Identity = 96/245 (39.18%), Postives = 146/245 (59.59%), Query Frame = 1
BLAST of CmaCh16G008270 vs. NCBI nr
Match: gi|764594642|ref|XP_011465672.1| (PREDICTED: (-)-germacrene D synthase-like [Fragaria vesca subsp. vesca]) HSP 1 Score: 166.8 bits (421), Expect = 6.2e-38 Identity = 116/338 (34.32%), Postives = 173/338 (51.18%), Query Frame = 1
BLAST of CmaCh16G008270 vs. NCBI nr
Match: gi|793420197|ref|NP_001292628.1| ((+)-gamma-cadinene synthase [Cucumis sativus]) HSP 1 Score: 164.1 bits (414), Expect = 4.0e-37 Identity = 86/143 (60.14%), Postives = 110/143 (76.92%), Query Frame = 1
BLAST of CmaCh16G008270 vs. NCBI nr
Match: gi|778676208|ref|XP_011650545.1| (PREDICTED: (+)-gamma-cadinene synthase [Cucumis sativus]) HSP 1 Score: 162.5 bits (410), Expect = 1.2e-36 Identity = 105/235 (44.68%), Postives = 138/235 (58.72%), Query Frame = 1
BLAST of CmaCh16G008270 vs. NCBI nr
Match: gi|700201056|gb|KGN56189.1| (hypothetical protein Csa_3G097040 [Cucumis sativus]) HSP 1 Score: 161.4 bits (407), Expect = 2.6e-36 Identity = 85/143 (59.44%), Postives = 109/143 (76.22%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |