CmaCh16G008220 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh16G008220
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	Terpene synthase
Location	Cma_Chr16 : 4576944 .. 4577432 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGAGCCCAAACACTCCTAAAGTCAAACGTCCTGTTGCAAAATATCATCCAAGCATATGGAAGGACCACTTCCTTTCACTAACATCTGATGCATCGGTAAATTAATCTTTAGTGTTCATGAATTATACCATAATCATAATTATTTCAAAATTTGTTTATTTTTTTGGACTTCCTTTTCAATTTTAGAATATAGATGTTGAGATGGAGGAACAAGCTAAAGAGTTGAAAGTAGGAGTGAAAAAGATGCTAATGATTTCTAATAGAAATCTTTTTGGGAAGTTACGTTTGGTTGATTCAATACAACGGTTAGGCGTATATTATCATTTCGAAAATGAGATTGATCAAGTCTTAGAAAAAATATATACAAACTATAGAGACTTCACAAGTATTGATGGTGACGAGGATCTTCACACTGTCTCTCTTCTATTTCGATTGCATAGACAACAAGGTTATAAAATTCCATGTGGTAAGTTTATTCATATATAA

mRNA sequence

ATGAAGAGCCCAAACACTCCTAAAGTCAAACGTCCTGTTGCAAAATATCATCCAAGCATATGGAAGGACCACTTCCTTTCACTAACATCTGATGCATCGAATATAGATGTTGAGATGGAGGAACAAGCTAAAGAGTTGAAAGTAGGAGTGAAAAAGATGCTAATGATTTCTAATAGAAATCTTTTTGGGAAGTTACGTTTGGTTGATTCAATACAACGGTTAGGCGTATATTATCATTTCGAAAATGAGATTGATCAAGTCTTAGAAAAAATATATACAAACTATAGAGACTTCACAAGTATTGATGGTGACGAGGATCTTCACACTGTCTCTCTTCTATTTCGATTGCATAGACAACAAGGTTATAAAATTCCATGTGGTAAGTTTATTCATATATAA

Coding sequence (CDS)

ATGAAGAGCCCAAACACTCCTAAAGTCAAACGTCCTGTTGCAAAATATCATCCAAGCATATGGAAGGACCACTTCCTTTCACTAACATCTGATGCATCGAATATAGATGTTGAGATGGAGGAACAAGCTAAAGAGTTGAAAGTAGGAGTGAAAAAGATGCTAATGATTTCTAATAGAAATCTTTTTGGGAAGTTACGTTTGGTTGATTCAATACAACGGTTAGGCGTATATTATCATTTCGAAAATGAGATTGATCAAGTCTTAGAAAAAATATATACAAACTATAGAGACTTCACAAGTATTGATGGTGACGAGGATCTTCACACTGTCTCTCTTCTATTTCGATTGCATAGACAACAAGGTTATAAAATTCCATGTGGTAAGTTTATTCATATATAA

Protein sequence

MKSPNTPKVKRPVAKYHPSIWKDHFLSLTSDASNIDVEMEEQAKELKVGVKKMLMISNRNLFGKLRLVDSIQRLGVYYHFENEIDQVLEKIYTNYRDFTSIDGDEDLHTVSLLFRLHRQQGYKIPCGKFIHI

Homology

[Close]

BLAST of CmaCh16G008220 vs. Swiss-Prot
Match: GCSY1_CUCME ((+)-gamma-cadinene synthase OS=Cucumis melo PE=1 SV=1)

HSP 1 Score: 127.9 bits (320), Expect = 8.4e-29
Identity = 67/135 (49.63%), Postives = 90/135 (66.67%), Query Frame = 1


Query: 1   MKSPNTPKVKRPVAKYHPSIWKDHFLSLT-SDASNIDVEMEEQAKELKVGVKKMLMISNR 60
           MK+ + P VKR +A +HP+IWK+HFLS T  DA  ID  M+E+ ++LK  ++ M++    
Sbjct: 13  MKTNDIPDVKRSLANFHPNIWKEHFLSFTFDDALKIDEGMKERTEKLKEEIRMMMIAYVE 72

Query: 61  NLFGKLRLVDSIQRLGVYYHFENEIDQVLEKIYTNYRDFTSI----DGDEDLHTVSLLFR 120
           N   KL LVDSIQRLGV YHFE+E+D+ LE IY +Y +   +       EDLH  +LLFR
Sbjct: 73  NQLIKLNLVDSIQRLGVSYHFEDEVDEFLEHIYVSYNNSLLLSNKNSNGEDLHITALLFR 132

Query: 121 LHRQQGYKIPCGKFI 131
           L RQQGY+I C  F+
Sbjct: 133 LLRQQGYRISCDIFL 147

[Close]

BLAST of CmaCh16G008220 vs. Swiss-Prot
Match: TPSGD_VITVI ((-)-germacrene D synthase OS=Vitis vinifera GN=VIT_19s0014g04930 PE=1 SV=1)

HSP 1 Score: 119.0 bits (297), Expect = 3.9e-26
Identity = 59/124 (47.58%), Postives = 86/124 (69.35%), Query Frame = 1


Query: 6   TPKVKRPVAKYHPSIWKDHFLSLTSDASNIDVEMEEQAKELKVGVKKMLMISNRNLFGKL 65
           +P+V R  A +HPSIW DHFLS  S+ +N D  +++  ++LK  V+KMLM ++ +   KL
Sbjct: 17  SPEVGRRCANFHPSIWGDHFLSYASEFTNTDDHLKQHVQQLKEEVRKMLMAADDDSAQKL 76

Query: 66  RLVDSIQRLGVYYHFENEIDQVLEKIYTNYRDFTSIDGDEDLHTVSLLFRLHRQQGYKIP 125
            L+D+IQRLGV YHFE+EID+VL+ ++    D + +  +ED++T SL FRL RQQGY + 
Sbjct: 77  LLIDAIQRLGVAYHFESEIDEVLKHMF----DGSVVSAEEDVYTASLRFRLLRQQGYHVS 136

Query: 126 CGKF 130
           C  F
Sbjct: 137 CDLF 136

[Close]

BLAST of CmaCh16G008220 vs. Swiss-Prot
Match: TPS1_RICCO (Alpha-copaene synthase OS=Ricinus communis GN=TPS1 PE=1 SV=1)

HSP 1 Score: 111.3 bits (277), Expect = 8.1e-24
Identity = 58/124 (46.77%), Postives = 82/124 (66.13%), Query Frame = 1


Query: 6   TPKVKRPVAKYHPSIWKDHFLSLTSDASNIDVEMEEQAKELKVGVKKMLMISNRNLFGKL 65
           T  VKR  + YHP+IW DHFL+  S +  ID  +E+Q + LK  V+KM++  N     KL
Sbjct: 18  TSAVKRHSSTYHPTIWGDHFLANLSHSKIIDGSIEQQFEGLKQKVRKMIIDLNNEPCKKL 77

Query: 66  RLVDSIQRLGVYYHFENEIDQVLEKIYTNYRDFTSIDGDEDLHTVSLLFRLHRQQGYKIP 125
            L+D++QRLGV YHF++EI+ VL+K+Y +Y      D ++DL+TV+L FRL RQ G K+ 
Sbjct: 78  GLIDAVQRLGVGYHFKSEIEDVLQKVYHDYS-----DDEDDLNTVALRFRLLRQHGIKVS 136

Query: 126 CGKF 130
           C  F
Sbjct: 138 CAIF 136

[Close]

BLAST of CmaCh16G008220 vs. Swiss-Prot
Match: TPS3_RICCO (Probable terpene synthase 3 OS=Ricinus communis GN=TPS3 PE=3 SV=1)

HSP 1 Score: 107.1 bits (266), Expect = 1.5e-22
Identity = 54/127 (42.52%), Postives = 83/127 (65.35%), Query Frame = 1


Query: 3   SPNTPKVKRPVAKYHPSIWKDHFLSLTSDASNIDVEMEEQAKELKVGVKKMLMISNRNLF 62
           +P   +V+R  A++HPS+W D+F+    D   + +  +EQAK L+  V++M++   +   
Sbjct: 8   APQRAQVRR-TAQFHPSVWGDYFIKNAPDNKMVSI-WKEQAKVLEEEVRRMIISETQKPS 67

Query: 63  GKLRLVDSIQRLGVYYHFENEIDQVLEKIYTNYRDFTSIDGDEDLHTVSLLFRLHRQQGY 122
           GKL+L+D IQRLG+ YHFE EI +V+E++Y+NY      D DEDL+ ++L FRL RQQGY
Sbjct: 68  GKLKLIDVIQRLGIAYHFEEEIGEVIEQVYSNY------DDDEDLYDIALRFRLLRQQGY 126

Query: 123 KIPCGKF 130
            +    F
Sbjct: 128 NVSSDVF 126

[Close]

BLAST of CmaCh16G008220 vs. Swiss-Prot
Match: SAUSS_SANAS (Sesquiterpene synthase OS=Santalum austrocaledonicum PE=2 SV=1)

HSP 1 Score: 106.7 bits (265), Expect = 2.0e-22
Identity = 53/127 (41.73%), Postives = 77/127 (60.63%), Query Frame = 1


Query: 4   PNTPKVKRPVAKYHPSIWKDHFLSLTSDASNIDVEMEEQAKELKVGVKKMLMISNRNLFG 63
           PN  ++ RP+A + PSIW D F++ T +  N   + E Q +ELK  V++ L  +      
Sbjct: 12  PNLKELSRPIANFPPSIWGDRFINYTCEDENEQAQKERQVEELKEQVRRELAATVDKPLQ 71

Query: 64  KLRLVDSIQRLGVYYHFENEIDQVLEKIYTN-YRDFTSIDGDEDLHTVSLLFRLHRQQGY 123
           +L ++D+ QRLG+ YHFENEI++ LE IY + Y       G  DL++V+L FRL RQ GY
Sbjct: 72  QLNIIDATQRLGIAYHFENEIEESLEHIYLHTYVKNNCFQGSHDLYSVALWFRLLRQDGY 131

Query: 124 KIPCGKF 130
           K+ C  F
Sbjct: 132 KVSCDVF 138

[Close]

BLAST of CmaCh16G008220 vs. TrEMBL
Match: A0A0B4VEV4_CUCME (Sesquiterpene synthase Tps1 OS=Cucumis melo PE=2 SV=1)

HSP 1 Score: 125.6 bits (314), Expect = 4.6e-26
Identity = 66/135 (48.89%), Postives = 90/135 (66.67%), Query Frame = 1


Query: 1   MKSPNTPKVKRPVAKYHPSIWKDHFLSLT-SDASNIDVEMEEQAKELKVGVKKMLMISNR 60
           MK+ + P VKR +A +HP+IWK+HFLS T  DA  +D  M+E+ ++LK  ++ M++    
Sbjct: 13  MKTNDIPDVKRSLAIFHPNIWKEHFLSFTFDDALKVDEGMKERTEKLKEEIRMMMIAYVE 72

Query: 61  NLFGKLRLVDSIQRLGVYYHFENEIDQVLEKIYTNYRDFTSIDG----DEDLHTVSLLFR 120
           N   KL LVDSIQRLGV YHFE+EID+ L+ IY +Y +   +       EDLH  +LLFR
Sbjct: 73  NQLVKLNLVDSIQRLGVSYHFEDEIDEFLKHIYVSYNNSLLLSNKDIEGEDLHITALLFR 132

Query: 121 LHRQQGYKIPCGKFI 131
           L RQQGY+I C  F+
Sbjct: 133 LLRQQGYRISCDIFL 147

[Close]

BLAST of CmaCh16G008220 vs. TrEMBL
Match: Q66PX8_CUCSA (Beta-caryophyllene synthase OS=Cucumis sativus PE=2 SV=1)

HSP 1 Score: 125.2 bits (313), Expect = 6.0e-26
Identity = 68/135 (50.37%), Postives = 93/135 (68.89%), Query Frame = 1


Query: 1   MKSPNTPKVKRPVAKYHPSIWKDHFLSLT-SDASNIDVEMEEQAKELKVGVKKMLMISNR 60
           MK+ +    KR +A +HP+IWK+HFLS T  DA  +D  M+E+ ++LK  ++ M++ S +
Sbjct: 10  MKTNDIYDTKRSLANFHPTIWKEHFLSFTFDDALKVDGGMKERIEKLKEEIRMMVIASVQ 69

Query: 61  NLFGKLRLVDSIQRLGVYYHFENEIDQVLEKIYTNYRD---FTSIDG-DEDLHTVSLLFR 120
           N   KL LVDSIQRLGV YHFE+EIDQ LE +Y +Y +   F+S D  D+DLH  +LLFR
Sbjct: 70  NPLVKLNLVDSIQRLGVSYHFEDEIDQFLEHMYVSYNNSLLFSSNDSQDDDLHISALLFR 129

Query: 121 LHRQQGYKIPCGKFI 131
           L RQ GY+I C  F+
Sbjct: 130 LLRQHGYRISCDIFL 144

[Close]

BLAST of CmaCh16G008220 vs. TrEMBL
Match: A0A0A0L579_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G097040 PE=3 SV=1)

HSP 1 Score: 122.5 bits (306), Expect = 3.9e-25
Identity = 67/135 (49.63%), Postives = 92/135 (68.15%), Query Frame = 1


Query: 1   MKSPNTPKVKRPVAKYHPSIWKDHFLSLT-SDASNIDVEMEEQAKELKVGVKKMLMISNR 60
           MK+ +    KR +A +HP+IWK+HFLS T  DA  +D  M+E+ ++LK  ++ M++ S +
Sbjct: 10  MKTNDIYDTKRSLANFHPTIWKEHFLSFTFDDALKVDGGMKERIEKLKEEIRMMVIASVQ 69

Query: 61  NLFGKLRLVDSIQRLGVYYHFENEIDQVLEKIYTNYRD---FTSIDG-DEDLHTVSLLFR 120
           N   KL LVDSIQRLGV YHFE+EI+Q  E IY +Y +   F+S D  D+DLH  +LLFR
Sbjct: 70  NPLVKLNLVDSIQRLGVSYHFEDEIEQFSEHIYVSYNNSLLFSSNDSQDDDLHISALLFR 129

Query: 121 LHRQQGYKIPCGKFI 131
           L RQ GY+I C  F+
Sbjct: 130 LLRQHGYRISCDIFL 144

[Close]

BLAST of CmaCh16G008220 vs. TrEMBL
Match: A0A067DU63_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g024780mg PE=3 SV=1)

HSP 1 Score: 119.8 bits (299), Expect = 2.5e-24
Identity = 63/127 (49.61%), Postives = 84/127 (66.14%), Query Frame = 1


Query: 3   SPNTPKVKRPVAKYHPSIWKDHFLSLTSDASNIDVEMEEQAKELKVGVKKMLMISNRNLF 62
           S +T K  RP+  +HPS+W DHFL+L SD    D   +E+ + LK  V+ M+  +     
Sbjct: 23  SSSTEKTGRPIEGFHPSLWGDHFLTLASDCETNDTTHQEEYEALKQEVRSMITATADTPA 82

Query: 63  GKLRLVDSIQRLGVYYHFENEIDQVLEKIYTNYRDFTSIDGDEDLHTVSLLFRLHRQQGY 122
            KL+LVD++QRLGV YHFE EI+  LEKIY  + DF + D D DL++VSL FRL RQQG+
Sbjct: 83  QKLQLVDAVQRLGVAYHFEQEIEDALEKIY--HDDFDNND-DVDLYSVSLRFRLLRQQGF 142

Query: 123 KIPCGKF 130
           K+PC  F
Sbjct: 143 KVPCDVF 146

[Close]

BLAST of CmaCh16G008220 vs. TrEMBL
Match: Q9FYU6_CITJU (Terpene synthase OS=Citrus junos PE=2 SV=1)

HSP 1 Score: 119.0 bits (297), Expect = 4.3e-24
Identity = 62/127 (48.82%), Postives = 85/127 (66.93%), Query Frame = 1


Query: 3   SPNTPKVKRPVAKYHPSIWKDHFLSLTSDASNIDVEMEEQAKELKVGVKKMLMISNRNLF 62
           S +T K  RP+A +HP++W D+FL+L SD    D   +E+ + LK  V+ M+  +     
Sbjct: 10  SSSTEKTVRPIAGFHPNLWGDYFLTLASDCKTDDTTHQEEYEALKQEVRSMITATADTPA 69

Query: 63  GKLRLVDSIQRLGVYYHFENEIDQVLEKIYTNYRDFTSIDGDEDLHTVSLLFRLHRQQGY 122
            KL+LVD++QRLGV YHFE EI+  +EKIY  + DF + D D DL+TVSL FRL RQQG+
Sbjct: 70  QKLQLVDAVQRLGVAYHFEQEIEDAMEKIY--HDDFDNND-DVDLYTVSLRFRLLRQQGF 129

Query: 123 KIPCGKF 130
           K+PC  F
Sbjct: 130 KVPCDVF 133

[Close]

BLAST of CmaCh16G008220 vs. TAIR10
Match: AT3G14520.1 (AT3G14520.1 Terpenoid cyclases/Protein prenyltransferases superfamily protein)

HSP 1 Score: 88.2 bits (217), Expect = 4.1e-18
Identity = 48/128 (37.50%), Postives = 74/128 (57.81%), Query Frame = 1


Query: 2   KSPNTPKVKRPVAKYHPSIWKDHFLSLTSDASNIDVEMEEQAKELKVGVKKMLMISNRNL 61
           KS +  +  RP   + PS+W DHFLS++ D    D E+E + + +K  VK MLM S  + 
Sbjct: 54  KSSDDLEGSRPSTYFSPSLWGDHFLSVSLDRGEFD-ELEREIETMKPLVKDMLMSSQSSD 113

Query: 62  FGKLRLVDSIQRLGVYYHFENEIDQVLEKIYTNYRDFTSIDGDEDLHTVSLLFRLHRQQG 121
             K+RL+  +  LG  YHF+ EI  +L+  +T   D   I G++DL T+S++F + R  G
Sbjct: 114 KEKIRLIHLLVSLGSSYHFDKEIQDILKHSFTKLDDI--IVGEDDLETISIMFEVFRLYG 173

Query: 122 YKIPCGKF 130
           +K+ C  F
Sbjct: 174 HKMSCDAF 178

[Close]

BLAST of CmaCh16G008220 vs. TAIR10
Match: AT3G14540.1 (AT3G14540.1 Terpenoid cyclases/Protein prenyltransferases superfamily protein)

HSP 1 Score: 85.5 bits (210), Expect = 2.7e-17
Identity = 48/132 (36.36%), Postives = 75/132 (56.82%), Query Frame = 1


Query: 2   KSPNTPKVKRPVAKYHPSIWKDHFLSLTSDASNIDVEMEEQAKELKVGVKKMLMISNRNL 61
           KS +  +  RP   + PS+W DHFLS++ D +   VE+E + + +K  VK MLM S  + 
Sbjct: 51  KSSDDLETSRPSTYFSPSLWGDHFLSVSLDHAEF-VELEREIETMKPLVKDMLMSSQSSD 110

Query: 62  FGKLRLVDSIQRLGVYYHFENEIDQVLEKIYTNYRDFTSIDG----DEDLHTVSLLFRLH 121
             K+RL+  +  LG  YHF+ EI  +L+        FT +DG    ++DL T+S++F + 
Sbjct: 111 KEKIRLIHLLVSLGSSYHFDKEIQDILK------HSFTKLDGIIVEEDDLETISIMFEVF 170

Query: 122 RQQGYKIPCGKF 130
           R  G+K+ C  F
Sbjct: 171 RLYGHKMSCDAF 175

[Close]

BLAST of CmaCh16G008220 vs. TAIR10
Match: AT3G14490.1 (AT3G14490.1 Terpenoid cyclases/Protein prenyltransferases superfamily protein)

HSP 1 Score: 82.8 bits (203), Expect = 1.7e-16
Identity = 43/119 (36.13%), Postives = 67/119 (56.30%), Query Frame = 1


Query: 11  RPVAKYHPSIWKDHFLSLTSDASNIDVEMEEQAKELKVGVKKMLMISNRNLFGKLRLVDS 70
           RP+A + P++W DHFLS+    +  D    E    +K  V+ ML  S  +   ++RL+  
Sbjct: 60  RPLAHFSPTLWGDHFLSVPLHVAEFDDFSREIEVTMKPKVRDMLKSSKNSDNERIRLIHL 119

Query: 71  IQRLGVYYHFENEIDQVLEKIYTNYRDFTSIDGDEDLHTVSLLFRLHRQQGYKIPCGKF 130
           +  LG+ YHFE EID++L + + N  D   I  + DL T+S +F + R +GY +PC  F
Sbjct: 120 LMNLGIAYHFEIEIDEILGQAFGNLDDI--IAKENDLETISTMFEVFRLRGYYMPCYAF 176

[Close]

BLAST of CmaCh16G008220 vs. TAIR10
Match: AT3G29410.1 (AT3G29410.1 Terpenoid cyclases/Protein prenyltransferases superfamily protein)

HSP 1 Score: 82.0 bits (201), Expect = 3.0e-16
Identity = 41/119 (34.45%), Postives = 69/119 (57.98%), Query Frame = 1


Query: 11  RPVAKYHPSIWKDHFLSLTSDASNIDVEMEEQAKELKVGVKKMLMISNRNLFGKLRLVDS 70
           RP+  + PS W DHFLS++ D S  +   +E     K  V+ MLM  + +   ++RL+  
Sbjct: 64  RPLTYFSPSYWGDHFLSVSIDDSEFEALEKEIETVFKPKVRDMLMSPHSSDKERIRLIHL 123

Query: 71  IQRLGVYYHFENEIDQVLEKIYTNYRDFTSIDGDEDLHTVSLLFRLHRQQGYKIPCGKF 130
           +  LG+ Y++ENEI+++L K Y        I  ++DL T++++F + R  G+K+PC  F
Sbjct: 124 LISLGIAYYYENEIEEILHKAYGKLA--CLISDEDDLETIAIMFEVFRLYGHKMPCDVF 180

[Close]

BLAST of CmaCh16G008220 vs. TAIR10
Match: AT2G24210.1 (AT2G24210.1 terpene synthase 10)

HSP 1 Score: 78.6 bits (192), Expect = 3.3e-15
Identity = 50/134 (37.31%), Postives = 68/134 (50.75%), Query Frame = 1


Query: 6   TPKVKRPVAKYHPSIWKDHFLSLTSDASNIDVEMEEQAKELKVGVKKMLMISNRNLFGKL 65
           +P V+R  A Y PS W  H L    +    D  + E+   LK  V+KML    +    +L
Sbjct: 41  SPTVQRRSANYQPSRWDHHHLLSVENKFAKDKRVRERDL-LKEKVRKMLNDEQKTYLDQL 100

Query: 66  RLVDSIQRLGVYYHFENEIDQVLEKIYTNYRDFTSIDGDEDLHTVSLLFRLHRQQGYKIP 125
             +D +Q+LGV YHFE EID +L   Y   +D T+I  + DLH  +L FRL RQ G+ + 
Sbjct: 101 EFIDDLQKLGVSYHFEAEIDNILTSSYK--KDRTNIQ-ESDLHATALEFRLFRQHGFNVS 160

Query: 126 ----------CGKF 130
                     CGKF
Sbjct: 161 EDVFDVFMENCGKF 170

[Close]

BLAST of CmaCh16G008220 vs. NCBI nr
Match: gi|659102820|ref|XP_008452330.1| (PREDICTED: (+)-gamma-cadinene synthase-like [Cucumis melo])

HSP 1 Score: 128.3 bits (321), Expect = 1.0e-26
Identity = 67/135 (49.63%), Postives = 90/135 (66.67%), Query Frame = 1


Query: 1   MKSPNTPKVKRPVAKYHPSIWKDHFLSLT-SDASNIDVEMEEQAKELKVGVKKMLMISNR 60
           MK+ + P VKR +A +HP+IWK+HFLS T  DA  +D  M+E+ ++LK  ++ M++    
Sbjct: 13  MKTNDIPDVKRSLANFHPNIWKEHFLSFTFDDALKVDEGMKERTEKLKEEIRMMMIAYVE 72

Query: 61  NLFGKLRLVDSIQRLGVYYHFENEIDQVLEKIYTNYRDFTSIDG----DEDLHTVSLLFR 120
           N   KL LVDSIQRLGV YHFE+EID+ LE IY +Y +   +       EDLH  +LLFR
Sbjct: 73  NQLVKLNLVDSIQRLGVSYHFEDEIDEFLEHIYVSYNNSLLLSNKDSEGEDLHITALLFR 132

Query: 121 LHRQQGYKIPCGKFI 131
           L RQQGY+I C  F+
Sbjct: 133 LLRQQGYRISCDIFL 147

[Close]

BLAST of CmaCh16G008220 vs. NCBI nr
Match: gi|661902982|ref|NP_001284382.1| ((+)-gamma-cadinene synthase [Cucumis melo])

HSP 1 Score: 127.9 bits (320), Expect = 1.3e-26
Identity = 67/135 (49.63%), Postives = 90/135 (66.67%), Query Frame = 1


Query: 1   MKSPNTPKVKRPVAKYHPSIWKDHFLSLT-SDASNIDVEMEEQAKELKVGVKKMLMISNR 60
           MK+ + P VKR +A +HP+IWK+HFLS T  DA  ID  M+E+ ++LK  ++ M++    
Sbjct: 13  MKTNDIPDVKRSLANFHPNIWKEHFLSFTFDDALKIDEGMKERTEKLKEEIRMMMIAYVE 72

Query: 61  NLFGKLRLVDSIQRLGVYYHFENEIDQVLEKIYTNYRDFTSI----DGDEDLHTVSLLFR 120
           N   KL LVDSIQRLGV YHFE+E+D+ LE IY +Y +   +       EDLH  +LLFR
Sbjct: 73  NQLIKLNLVDSIQRLGVSYHFEDEVDEFLEHIYVSYNNSLLLSNKNSNGEDLHITALLFR 132

Query: 121 LHRQQGYKIPCGKFI 131
           L RQQGY+I C  F+
Sbjct: 133 LLRQQGYRISCDIFL 147

[Close]

BLAST of CmaCh16G008220 vs. NCBI nr
Match: gi|745672488|gb|AJD19682.1| (sesquiterpene synthase Tps1 [Cucumis melo])

HSP 1 Score: 125.6 bits (314), Expect = 6.6e-26
Identity = 66/135 (48.89%), Postives = 90/135 (66.67%), Query Frame = 1


Query: 1   MKSPNTPKVKRPVAKYHPSIWKDHFLSLT-SDASNIDVEMEEQAKELKVGVKKMLMISNR 60
           MK+ + P VKR +A +HP+IWK+HFLS T  DA  +D  M+E+ ++LK  ++ M++    
Sbjct: 13  MKTNDIPDVKRSLAIFHPNIWKEHFLSFTFDDALKVDEGMKERTEKLKEEIRMMMIAYVE 72

Query: 61  NLFGKLRLVDSIQRLGVYYHFENEIDQVLEKIYTNYRDFTSIDG----DEDLHTVSLLFR 120
           N   KL LVDSIQRLGV YHFE+EID+ L+ IY +Y +   +       EDLH  +LLFR
Sbjct: 73  NQLVKLNLVDSIQRLGVSYHFEDEIDEFLKHIYVSYNNSLLLSNKDIEGEDLHITALLFR 132

Query: 121 LHRQQGYKIPCGKFI 131
           L RQQGY+I C  F+
Sbjct: 133 LLRQQGYRISCDIFL 147

[Close]

BLAST of CmaCh16G008220 vs. NCBI nr
Match: gi|793420197|ref|NP_001292628.1| ((+)-gamma-cadinene synthase [Cucumis sativus])

HSP 1 Score: 125.2 bits (313), Expect = 8.7e-26
Identity = 68/135 (50.37%), Postives = 93/135 (68.89%), Query Frame = 1


Query: 1   MKSPNTPKVKRPVAKYHPSIWKDHFLSLT-SDASNIDVEMEEQAKELKVGVKKMLMISNR 60
           MK+ +    KR +A +HP+IWK+HFLS T  DA  +D  M+E+ ++LK  ++ M++ S +
Sbjct: 10  MKTNDIYDTKRSLANFHPTIWKEHFLSFTFDDALKVDGGMKERIEKLKEEIRMMVIASVQ 69

Query: 61  NLFGKLRLVDSIQRLGVYYHFENEIDQVLEKIYTNYRD---FTSIDG-DEDLHTVSLLFR 120
           N   KL LVDSIQRLGV YHFE+EIDQ LE +Y +Y +   F+S D  D+DLH  +LLFR
Sbjct: 70  NPLVKLNLVDSIQRLGVSYHFEDEIDQFLEHMYVSYNNSLLFSSNDSQDDDLHISALLFR 129

Query: 121 LHRQQGYKIPCGKFI 131
           L RQ GY+I C  F+
Sbjct: 130 LLRQHGYRISCDIFL 144

[Close]

BLAST of CmaCh16G008220 vs. NCBI nr
Match: gi|700201056|gb|KGN56189.1| (hypothetical protein Csa_3G097040 [Cucumis sativus])

HSP 1 Score: 122.5 bits (306), Expect = 5.6e-25
Identity = 67/135 (49.63%), Postives = 92/135 (68.15%), Query Frame = 1


Query: 1   MKSPNTPKVKRPVAKYHPSIWKDHFLSLT-SDASNIDVEMEEQAKELKVGVKKMLMISNR 60
           MK+ +    KR +A +HP+IWK+HFLS T  DA  +D  M+E+ ++LK  ++ M++ S +
Sbjct: 10  MKTNDIYDTKRSLANFHPTIWKEHFLSFTFDDALKVDGGMKERIEKLKEEIRMMVIASVQ 69

Query: 61  NLFGKLRLVDSIQRLGVYYHFENEIDQVLEKIYTNYRD---FTSIDG-DEDLHTVSLLFR 120
           N   KL LVDSIQRLGV YHFE+EI+Q  E IY +Y +   F+S D  D+DLH  +LLFR
Sbjct: 70  NPLVKLNLVDSIQRLGVSYHFEDEIEQFSEHIYVSYNNSLLFSSNDSQDDDLHISALLFR 129

Query: 121 LHRQQGYKIPCGKFI 131
           L RQ GY+I C  F+
Sbjct: 130 LLRQHGYRISCDIFL 144

The following BLAST results are available for this feature:

BLAST of CmaCh16G008220 vs. Swiss-Prot


Match Name	E-value	Identity	Description
GCSY1_CUCME	8.4e-29	49.63	(+)-gamma-cadinene synthase OS=Cucumis melo PE=1 SV=1	[more]
TPSGD_VITVI	3.9e-26	47.58	(-)-germacrene D synthase OS=Vitis vinifera GN=VIT_19s0014g04930 PE=1 SV=1	[more]
TPS1_RICCO	8.1e-24	46.77	Alpha-copaene synthase OS=Ricinus communis GN=TPS1 PE=1 SV=1	[more]
TPS3_RICCO	1.5e-22	42.52	Probable terpene synthase 3 OS=Ricinus communis GN=TPS3 PE=3 SV=1	[more]
SAUSS_SANAS	2.0e-22	41.73	Sesquiterpene synthase OS=Santalum austrocaledonicum PE=2 SV=1	[more]

BLAST of CmaCh16G008220 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0B4VEV4_CUCME	4.6e-26	48.89	Sesquiterpene synthase Tps1 OS=Cucumis melo PE=2 SV=1	[more]
Q66PX8_CUCSA	6.0e-26	50.37	Beta-caryophyllene synthase OS=Cucumis sativus PE=2 SV=1	[more]
A0A0A0L579_CUCSA	3.9e-25	49.63	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G097040 PE=3 SV=1	[more]
A0A067DU63_CITSI	2.5e-24	49.61	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g024780mg PE=3 SV=1	[more]
Q9FYU6_CITJU	4.3e-24	48.82	Terpene synthase OS=Citrus junos PE=2 SV=1	[more]

BLAST of CmaCh16G008220 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G14520.1	4.1e-18	37.50	Terpenoid cyclases/Protein prenyltransferases superfamily protein	[more]
AT3G14540.1	2.7e-17	36.36	Terpenoid cyclases/Protein prenyltransferases superfamily protein	[more]
AT3G14490.1	1.7e-16	36.13	Terpenoid cyclases/Protein prenyltransferases superfamily protein	[more]
AT3G29410.1	3.0e-16	34.45	Terpenoid cyclases/Protein prenyltransferases superfamily protein	[more]
AT2G24210.1	3.3e-15	37.31	terpene synthase 10	[more]

BLAST of CmaCh16G008220 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659102820\|ref\|XP_008452330.1\|	1.0e-26	49.63	PREDICTED: (+)-gamma-cadinene synthase-like [Cucumis melo]	[more]
gi\|661902982\|ref\|NP_001284382.1\|	1.3e-26	49.63	(+)-gamma-cadinene synthase [Cucumis melo]	[more]
gi\|745672488\|gb\|AJD19682.1\|	6.6e-26	48.89	sesquiterpene synthase Tps1 [Cucumis melo]	[more]
gi\|793420197\|ref\|NP_001292628.1\|	8.7e-26	50.37	(+)-gamma-cadinene synthase [Cucumis sativus]	[more]
gi\|700201056\|gb\|KGN56189.1\|	5.6e-25	49.63	hypothetical protein Csa_3G097040 [Cucumis sativus]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR001906	Terpene_synth_N
IPR008930	Terpenoid_cyclase/PrenylTrfase

Vocabulary: **Biological Process**
Term	Definition
GO:0008152	metabolic process

Vocabulary: **Molecular Function**
Term	Definition
GO:0010333	terpene synthase activity
GO:0016829	lyase activity

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045338	farnesyl diphosphate metabolic process
biological_process	GO:0051762	sesquiterpene biosynthetic process
biological_process	GO:0008152	metabolic process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0010334	sesquiterpene synthase activity
molecular_function	GO:0016829	lyase activity
molecular_function	GO:0010333	terpene synthase activity
molecular_function	GO:0047461	(+)-delta-cadinene synthase activity
molecular_function	GO:0000287	magnesium ion binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh16G008220.1	CmaCh16G008220.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001906	Terpene synthase, N-terminal domain	GENE3D	G3DSA:1.50.30.10		coord: 39..129 score: 2.8
IPR001906	Terpene synthase, N-terminal domain	PFAM	PF01397	Terpene_synth	coord: 20..130 score: 2.5
IPR008930	Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid	unknown	SSF48239	Terpenoid cyclases/Protein prenyltransferases	coord: 17..129 score: 2.2
None	No IPR available	PANTHER	PTHR31225	FAMILY NOT NAMED	coord: 6..127 score: 3.8
None	No IPR available	PANTHER	PTHR31225:SF15	ALPHA-HUMULENE/(-)-(E)-BETA-CARYOPHYLLENE SYNTHASE	coord: 6..127 score: 3.8

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh16G008220	CmoCh16G008800	Cucurbita moschata (Rifu)	cmacmoB322
CmaCh16G008220	Cp4.1LG14g00010	Cucurbita pepo (Zucchini)	cmacpeB344
CmaCh16G008220	Cla97C10G190240	Watermelon (97103) v2	cmawmbB336
CmaCh16G008220	Bhi11G000558	Wax gourd	cmawgoB0421
CmaCh16G008220	CsGy3G005780	Cucumber (Gy14) v2	cgybcmaB341

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh16G008220	Cucumber (Chinese Long) v3	cmacucB0371
CmaCh16G008220	Cucumber (Chinese Long) v3	cmacucB0382
CmaCh16G008220	Watermelon (97103) v2	cmawmbB343
CmaCh16G008220	Wax gourd	cmawgoB0417
CmaCh16G008220	Cucurbita maxima (Rimu)	cmacmaB041
CmaCh16G008220	Cucurbita maxima (Rimu)	cmacmaB339
CmaCh16G008220	Cucurbita maxima (Rimu)	cmacmaB350
CmaCh16G008220	Cucumber (Gy14) v1	cgycmaB0121
CmaCh16G008220	Cucumber (Gy14) v1	cgycmaB0337
CmaCh16G008220	Cucurbita moschata (Rifu)	cmacmoB317
CmaCh16G008220	Cucurbita moschata (Rifu)	cmacmoB324
CmaCh16G008220	Cucurbita moschata (Rifu)	cmacmoB328
CmaCh16G008220	Cucurbita moschata (Rifu)	cmacmoB337
CmaCh16G008220	Wild cucumber (PI 183967)	cmacpiB324
CmaCh16G008220	Wild cucumber (PI 183967)	cmacpiB334
CmaCh16G008220	Cucumber (Chinese Long) v2	cmacuB318
CmaCh16G008220	Cucumber (Chinese Long) v2	cmacuB328
CmaCh16G008220	Melon (DHL92) v3.5.1	cmameB292
CmaCh16G008220	Watermelon (Charleston Gray)	cmawcgB283
CmaCh16G008220	Watermelon (Charleston Gray)	cmawcgB294
CmaCh16G008220	Watermelon (Charleston Gray)	cmawcgB298
CmaCh16G008220	Watermelon (97103) v1	cmawmB306
CmaCh16G008220	Cucurbita pepo (Zucchini)	cmacpeB350
CmaCh16G008220	Cucurbita pepo (Zucchini)	cmacpeB356
CmaCh16G008220	Cucurbita pepo (Zucchini)	cmacpeB362
CmaCh16G008220	Bottle gourd (USVL1VR-Ls)	cmalsiB315
CmaCh16G008220	Cucumber (Gy14) v2	cgybcmaB084
CmaCh16G008220	Melon (DHL92) v3.6.1	cmamedB330
CmaCh16G008220	Melon (DHL92) v3.6.1	cmamedB345
CmaCh16G008220	Silver-seed gourd	carcmaB0946
CmaCh16G008220	Silver-seed gourd	carcmaB1243