CmaCh16G008200 (gene) Cucurbita maxima (Rimu)

Overview
NameCmaCh16G008200
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu))
DescriptionTerpene synthase 4-2
LocationCma_Chr16 : 4561241 .. 4562533 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAATCTTGTCCGGTAAGGAAATAAAAATAAGTAGTGTATTAGACTGGATGTATACTTTGAACTGCAGTTCAATGCCGAAAGAAAAATATTAATCGAAATAATCGTCATTTCACATATGAGGGTGCACGGAGAAGACTCAACCCCAAATTTGTTGCTCAAGTTGGCCGTGCTTTGAAATAGCCACTAAGAAAAGCCCTTCCAAGATTAAAGGCAAGAGAGTACATATCAATGTATTAATAAGGTCCTTTCCATTCTCAAACTTTGCTTACTTTTTCAAAACTGAATTTCAACATAAACTTCATCAAAATGAGGGGAAGGAACTCACCATGTTTATATTTATTTGTGTATGCAATTTCATATTTAACCTATAAAGTTACATTTTTAGGTTCATTCCTACTATTTATTTTAAATTATATGTTATTTCTTCTTATTTACATATTTTATATTTTGTAGGTGGTAGAAAGATTTGAATATTCAAACAAATTTCTCTGATGCAAGAGATAGAATTGTTGAGTGCTAGTTTGTGACATTGAGTGCATACTTTGAACTGCAGTTTAATGTCGAAAGAAAAATATTAACTAAAATAATAGCTATTTCTTCAATTTTAGATGAGACGTATGATGCATATGAAACATTTGAAGAACTCCAATTTTTCACTCGAGCAATTCAAAGGTCATTTGAATTCACTCCTATAGATAACTAAGAAATTTATTGTTTACATATAGCATACCCTTTAAATATACCATACAAATTTCTAAAGTTGAGAAATAGAAGAAAATATTTTTGAAATTTTGTCTTTTTAATATTTCAAATTTGGATAGAATTTTAATACTATTAATTTCAAATTTGGAGAGAAGAGTAATACAAAACACTTTTTTCTTTCAAAATTTATATACGAGAATCATATGAACAATAATGTTTTTGAATTTTCAAATGGAATAGAAGCATAGTTGATATACTCCCGAAGTACATGAAACTTTTATATATAGCAATGTTAAATCTTTATAAAGAAATCAGCAATGAAATAGGTAAGGATGAAAGTTCGTTCACATTCATACCACCAAAGAAGAAGTAAGCTTTCTTTGTCTCCCTCCTCTATCTTCTTTCCTTCTGTTTTATACATATAAATAAGAGTTATCATTTTGGTTTATATTTACAGATAAAAAAGCTAGCTAGATCCTACTTTGAAGAAGCTAAATGGTTAAACAAAAATTACAAACCAAAATTGAAAGAGTACAGAGAATGGGTATTGCATAGCTCAGGATATTCCTTGATTGTAAACATTTCATAG

mRNA sequence

ATGAATCTTGTCCGTTGGCCGTGCTTTGAAATAGCCACTAAGAAAAGCCCTTCCAAGATTAAAGGCAAGAGAGTACATATCAATGTATTAATAAGGTCCTTTCCATTCTCAAACTTTGCTTACTTTTTCAAAACTGAATTTCAACATAAACTTCATCAAAATGAGGGGAAGGAACTCACCATGTTTATATTTATTTGTAAAGATTTGAATATTCAAACAAATTTCTCTGATGCAAGAGATAGAATTTTTAATGTCGAAAGAAAAATATTAACTAAAATAATAGCTATTTCTTCAATTTTAGATGAGACGTATGATGCATATGAAACATTTGAAGAACTCCAATTTTTCACTCGAGCAATTCAAAGAAGCATAGTTGATATACTCCCGAAGTACATGAAACTTTTATATATAGCAATGTTAAATCTTTATAAAGAAATCAGCAATGAAATAGGTAAGGATGAAAGTTCGTTCACATTCATACCACCAAAGAAGAAAGTTATCATTTTGATAAAAAAGCTAGCTAGATCCTACTTTGAAGAAGCTAAATGGTTAAACAAAAATTACAAACCAAAATTGAAAGAGTACAGAGAATGGGTATTGCATAGCTCAGGATATTCCTTGATTGTAAACATTTCATAG

Coding sequence (CDS)

ATGAATCTTGTCCGTTGGCCGTGCTTTGAAATAGCCACTAAGAAAAGCCCTTCCAAGATTAAAGGCAAGAGAGTACATATCAATGTATTAATAAGGTCCTTTCCATTCTCAAACTTTGCTTACTTTTTCAAAACTGAATTTCAACATAAACTTCATCAAAATGAGGGGAAGGAACTCACCATGTTTATATTTATTTGTAAAGATTTGAATATTCAAACAAATTTCTCTGATGCAAGAGATAGAATTTTTAATGTCGAAAGAAAAATATTAACTAAAATAATAGCTATTTCTTCAATTTTAGATGAGACGTATGATGCATATGAAACATTTGAAGAACTCCAATTTTTCACTCGAGCAATTCAAAGAAGCATAGTTGATATACTCCCGAAGTACATGAAACTTTTATATATAGCAATGTTAAATCTTTATAAAGAAATCAGCAATGAAATAGGTAAGGATGAAAGTTCGTTCACATTCATACCACCAAAGAAGAAAGTTATCATTTTGATAAAAAAGCTAGCTAGATCCTACTTTGAAGAAGCTAAATGGTTAAACAAAAATTACAAACCAAAATTGAAAGAGTACAGAGAATGGGTATTGCATAGCTCAGGATATTCCTTGATTGTAAACATTTCATAG

Protein sequence

MNLVRWPCFEIATKKSPSKIKGKRVHINVLIRSFPFSNFAYFFKTEFQHKLHQNEGKELTMFIFICKDLNIQTNFSDARDRIFNVERKILTKIIAISSILDETYDAYETFEELQFFTRAIQRSIVDILPKYMKLLYIAMLNLYKEISNEIGKDESSFTFIPPKKKVIILIKKLARSYFEEAKWLNKNYKPKLKEYREWVLHSSGYSLIVNIS
Homology
[Close]
BLAST of CmaCh16G008200 vs. Swiss-Prot
Match: GCSY1_CUCME ((+)-gamma-cadinene synthase OS=Cucumis melo PE=1 SV=1)

HSP 1 Score: 153.7 bits (387), Expect = 2.3e-36
Identity = 94/191 (49.21%), Postives = 120/191 (62.83%), Query Frame = 1 

Query: 42  FFKTEFQ--HKLHQNEGKELTMFIFICKDLNIQTNFSDARDRI---------------FN 101
           F K +F    KLHQ E  E+  +    KDL++ T F  ARDRI               ++
Sbjct: 250 FSKLDFNILQKLHQKELSEICRW---WKDLDVPTKFPFARDRIVECYFWTLGAYFEPQYS 309

Query: 102 VERKILTKIIAISSILDETYDAYETFEELQFFTRAIQR---SIVDILPKYMKLLYIAMLN 161
           V RK+LTK+IAI+SILD+ YDAY TFEELQ  T AIQR   S+V  LP YMK  Y+AML 
Sbjct: 310 VGRKMLTKVIAIASILDDIYDAYGTFEELQVLTPAIQRWDRSMVHTLPLYMKPFYVAMLE 369

Query: 162 LYKEISNEIGKDESSFTFIPPKKKVIILIKKLARSYFEEAKWLNKNYKPKLKEYREWVLH 213
           LY+EI  EI KD++S       +  I  IK+L+ SYFEEAKWLNK YKP  KEY E  L 
Sbjct: 370 LYEEIGKEIDKDQNSLHL----QVAIGGIKRLSESYFEEAKWLNKEYKPSFKEYMELALK 429

[Close]
BLAST of CmaCh16G008200 vs. Swiss-Prot
Match: TPSGD_VITVI ((-)-germacrene D synthase OS=Vitis vinifera GN=VIT_19s0014g04930 PE=1 SV=1)

HSP 1 Score: 110.2 bits (274), Expect = 2.9e-23
Identity = 67/181 (37.02%), Postives = 100/181 (55.25%), Query Frame = 1 

Query: 50  KLHQNEGKELTMFIFICKDLNIQTNFSDARDRI---------------FNVERKILTKII 109
           KLHQ E  +++ +    KDL+       ARDR+               F   R+ILTK+I
Sbjct: 247 KLHQKELSDISAW---WKDLDFAHKLPFARDRVVECYFWILGVYFEPQFFFARRILTKVI 306

Query: 110 AISSILDETYDAYETFEELQFFTRAIQR---SIVDILPKYMKLLYIAMLNLYKEISNEIG 169
           A++SI+D+ YD Y T EEL+ FT A++R   S +D LP+YM++ Y A+L +Y EI  E+ 
Sbjct: 307 AMTSIIDDIYDVYGTLEELELFTEAVERWDISAIDQLPEYMRVCYQALLYVYSEIEEEMA 366

Query: 170 KDESSFTFIPPKKKVIILIKKLARSYFEEAKWLNKNYKPKLKEYREWVLHSSGYSLIVNI 213
           K+  S+     K+     +K   R+Y+EEAKWL     P ++EY    L +S YS++   
Sbjct: 367 KEGRSYRLYYAKE----AMKNQVRAYYEEAKWLQVQQIPTMEEYMPVALVTSAYSMLATT 420

[Close]
BLAST of CmaCh16G008200 vs. Swiss-Prot
Match: TPS1_PHYDL (Bifunctional sesquiterpene synthase 1 OS=Phyla dulcis PE=1 SV=1)

HSP 1 Score: 110.2 bits (274), Expect = 2.9e-23
Identity = 73/177 (41.24%), Postives = 98/177 (55.37%), Query Frame = 1 

Query: 51  LHQNEGKELTMFIFICKDLNIQTNFSDARDRI---------------FNVERKILTKIIA 110
           LH+ E  E++ +    K ++I  NF  ARDRI               + V RKI TK+IA
Sbjct: 255 LHKVELSEISRW---WKGVDIARNFPYARDRIVELYFWVLGVYFEPQYAVGRKITTKVIA 314

Query: 111 ISSILDETYDAYETFEELQFFTRAIQR---SIVDILPKYMKLLYIAMLNLYKEISNEIGK 170
           I+S+LD+T+DAY TFEEL+ F  A++R   S +D LP+YMKLLY  ML +  EI  E+ K
Sbjct: 315 IASLLDDTFDAYGTFEELRIFAEAVERWSVSCLDQLPEYMKLLYKTMLEVSDEIEEEMTK 374

Query: 171 DESSFTFIPPKKKVIILIKKLARSYFEEAKWLNKNYKPKLKEYREWVLHSSGYSLIV 210
             + F         I  IK  ARSYF EAKW  + YKP  +EY      + GY  ++
Sbjct: 375 LGTPFRI----AYGIEAIKTFARSYFLEAKWREEKYKPTTEEYMGLATKTCGYKSLI 424

[Close]
BLAST of CmaCh16G008200 vs. Swiss-Prot
Match: TPS6_PHYDL (Beta-caryophyllene synthase OS=Phyla dulcis PE=1 SV=1)

HSP 1 Score: 108.6 bits (270), Expect = 8.4e-23
Identity = 67/180 (37.22%), Postives = 103/180 (57.22%), Query Frame = 1 

Query: 47  FQHKLHQNEGKELTMFIFICKDLNIQTNFSDARDRI---------------FNVERKILT 106
           F  KLHQ E  +LT +    K+L+ +T    ARDR+               +N+ R  L+
Sbjct: 247 FSQKLHQKEISDLTRW---WKELDFKTKLPFARDRMVECYCWTLGIHPEPQYNLARNFLS 306

Query: 107 KIIAISSILDETYDAYETFEELQFFTRAIQR---SIVDILPKYMKLLYIAMLNLYKEISN 166
           K+I ++S++D+ YD   T +ELQ FT AIQR   S ++ LP YM++ Y A+LN+Y E+  
Sbjct: 307 KVIMLASVIDDIYDVRGTLDELQLFTDAIQRWDISAMEQLPPYMRVCYEALLNVYAEVE- 366

Query: 167 EIGKDESSFTFIPPKKKVIILIKKLARSYFEEAKWLNKNYKPKLKEYREWVLHSSGYSLI 209
           E+ + +  +     K+++    KKLAR+Y EE++WL K Y P  KEY    + SSGY ++
Sbjct: 367 ELERIDGPYRVHYAKEEM----KKLARAYLEESQWLYKKYIPTFKEYMSVAIPSSGYIMV 418

[Close]
BLAST of CmaCh16G008200 vs. Swiss-Prot
Match: TPSVS_VITVI (Valencene synthase OS=Vitis vinifera GN=ValCS PE=1 SV=1)

HSP 1 Score: 107.8 bits (268), Expect = 1.4e-22
Identity = 69/180 (38.33%), Postives = 104/180 (57.78%), Query Frame = 1 

Query: 51  LHQNEGKELTMFIFICKDLNIQTNFSDARDRI-----------FNVE----RKILTKIIA 110
           LH+ E   L  +    K+L+  T    ARDR+           F  +    R+ILTK+IA
Sbjct: 248 LHKEELSNLARW---WKELDFATKLPFARDRLVEGYFWMHGVYFEPQYLRGRRILTKVIA 307

Query: 111 ISSILDETYDAYETFEELQFFTRAIQR---SIVDILPKYMKLLYIAMLNLYKEISNEIGK 170
           ++SILD+ +DAY T EEL+ F  AI+R   + ++ LP+YMKL Y+A+L++YKEI  E+ K
Sbjct: 308 MTSILDDIHDAYGTPEELKLFIEAIERWDINSINQLPEYMKLCYVALLDVYKEIEEEMEK 367

Query: 171 DESSFTFIPPKKKVIILIKKLARSYFEEAKWLNKNYKPKLKEYREWVLHSSGYSLIVNIS 213
           + + +     K+    ++K   R+YF EAKWL++ + P  +EY    L SSGY L+   S
Sbjct: 368 EGNQYRVHYAKE----VMKNQVRAYFAEAKWLHEEHVPAFEEYMRVALASSGYCLLATTS 420

[Close]
BLAST of CmaCh16G008200 vs. TrEMBL
Match: A0A0A0L2I8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G097540 PE=3 SV=1)

HSP 1 Score: 160.2 bits (404), Expect = 2.7e-36
Identity = 97/191 (50.79%), Postives = 122/191 (63.87%), Query Frame = 1 

Query: 42  FFKTEFQ--HKLHQNEGKELTMFIFICKDLNIQTNFSDARDRI---------------FN 101
           F K +F    KLHQ E  E+  +    KDL++ T F  ARDRI               +N
Sbjct: 237 FSKLDFNILQKLHQKELSEICRW---WKDLDVPTKFPFARDRIVECYFWTLGAYFEPQYN 296

Query: 102 VERKILTKIIAISSILDETYDAYETFEELQFFTRAIQR---SIVDILPKYMKLLYIAMLN 161
           V RK+LTK+IAISSILD+ YDAY TFEELQ    AIQR   S+V  LP+YMK  Y+AM  
Sbjct: 297 VGRKMLTKVIAISSILDDIYDAYGTFEELQVLAPAIQRWDRSMVHTLPEYMKPFYVAMFE 356

Query: 162 LYKEISNEIGKDESSFTFIPPKKKVIILIKKLARSYFEEAKWLNKNYKPKLKEYREWVLH 213
           +Y+EIS EIGKD++S       +  I  IKKL+ SYFEEAKWLNK YKP  KEY E  L+
Sbjct: 357 VYEEISKEIGKDQNSLHL----QVAIGGIKKLSESYFEEAKWLNKKYKPSFKEYMELALN 416

[Close]
BLAST of CmaCh16G008200 vs. TrEMBL
Match: A0A0B4VEV4_CUCME (Sesquiterpene synthase Tps1 OS=Cucumis melo PE=2 SV=1)

HSP 1 Score: 154.8 bits (390), Expect = 1.1e-34
Identity = 93/191 (48.69%), Postives = 122/191 (63.87%), Query Frame = 1 

Query: 42  FFKTEFQ--HKLHQNEGKELTMFIFICKDLNIQTNFSDARDRI---------------FN 101
           F K +F    KLHQ E  E+  +    KDLN+ TNF  ARD+I               F 
Sbjct: 250 FSKLDFNALQKLHQKELAEICRW---WKDLNVSTNFPFARDQIVECYFWILSIYFEPRFK 309

Query: 102 VERKILTKIIAISSILDETYDAYETFEELQFFTRAIQR---SIVDILPKYMKLLYIAMLN 161
             RKILTK+IA++SI+D+ YDAY TFEELQ FT AI+R   S++++LPKYMK+ Y  +L+
Sbjct: 310 FGRKILTKVIAMTSIMDDIYDAYGTFEELQVFTLAIKRWDMSMINLLPKYMKVYYTTLLD 369

Query: 162 LYKEISNEIGKDESSFTFIPPKKKVIILIKKLARSYFEEAKWLNKNYKPKLKEYREWVLH 213
           L++EI  EI  DE+S+ F   K+ +    K+ A SYF+EA+WLNKNYKPK +EY E  L 
Sbjct: 370 LFEEIDKEIVNDETSYRFHFAKEAM----KRQAESYFKEAEWLNKNYKPKYEEYMEVALA 429

[Close]
BLAST of CmaCh16G008200 vs. TrEMBL
Match: A0A0A0L579_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G097040 PE=3 SV=1)

HSP 1 Score: 143.7 bits (361), Expect = 2.6e-31
Identity = 90/191 (47.12%), Postives = 117/191 (61.26%), Query Frame = 1 

Query: 42  FFKTEFQ--HKLHQNEGKELTMFIFICKDLNIQTNFSDARDRI---------------FN 101
           F K +F    KLHQ E  E+  +    KDLN+ TNF  ARDRI               F 
Sbjct: 247 FSKLDFNILQKLHQKEIAEICRW---WKDLNVSTNFPFARDRIVECYFWILSIYFEPYFK 306

Query: 102 VERKILTKIIAISSILDETYDAYETFEELQFFTRAIQR---SIVDILPKYMKLLYIAMLN 161
             RKILTK+IA++SI+D+ YDAY TFEELQ FT AI+R   S+V++LP+YMK+ Y  +L+
Sbjct: 307 FGRKILTKVIAMTSIMDDIYDAYGTFEELQLFTLAIKRWDMSMVNLLPQYMKVHYTTLLD 366

Query: 162 LYKEISNEIGKDESSFTFIPPKKKVIILIKKLARSYFEEAKWLNKNYKPKLKEYREWVLH 213
           L++E+   I  D  S+     K+ +    K+ A SYF+EA+WLNKNYKPK  EY E  L 
Sbjct: 367 LFEEMDKGIVNDGISYRSCFAKEAM----KRQAESYFKEAEWLNKNYKPKYGEYMEVALA 426

[Close]
BLAST of CmaCh16G008200 vs. TrEMBL
Match: Q66PX8_CUCSA (Beta-caryophyllene synthase OS=Cucumis sativus PE=2 SV=1)

HSP 1 Score: 143.3 bits (360), Expect = 3.4e-31
Identity = 90/191 (47.12%), Postives = 117/191 (61.26%), Query Frame = 1 

Query: 42  FFKTEFQ--HKLHQNEGKELTMFIFICKDLNIQTNFSDARDRI---------------FN 101
           F K +F    KLHQ E  E+  +    KDLN+ TNF  ARDRI               F 
Sbjct: 247 FSKLDFNILQKLHQKEIAEICRW---WKDLNVSTNFPFARDRIVECYFWILSIYFEPYFK 306

Query: 102 VERKILTKIIAISSILDETYDAYETFEELQFFTRAIQR---SIVDILPKYMKLLYIAMLN 161
             RKILTK+IA++SI+D+ YDAY TFEELQ FT AI+R   S+V++LP+YMK+ Y  +L+
Sbjct: 307 FGRKILTKVIAMTSIMDDIYDAYGTFEELQLFTLAIKRWDMSMVNLLPQYMKVHYTTLLD 366

Query: 162 LYKEISNEIGKDESSFTFIPPKKKVIILIKKLARSYFEEAKWLNKNYKPKLKEYREWVLH 213
           L++E+   I  D  S+     K+ +    K+ A SYF+EA+WLNKNYKPK  EY E  L 
Sbjct: 367 LFEEMDKGIVNDGISYRSCFGKEAM----KRQAESYFKEAEWLNKNYKPKYGEYMEVALA 426

[Close]
BLAST of CmaCh16G008200 vs. TrEMBL
Match: U3MLM5_COPLA (Terpene synthase 4-2 OS=Copaifera langsdorffii GN=TPS4-2 PE=2 SV=1)

HSP 1 Score: 119.8 bits (299), Expect = 4.1e-24
Identity = 72/191 (37.70%), Postives = 109/191 (57.07%), Query Frame = 1 

Query: 42  FFKTEFQ--HKLHQNEGKELTMFIFICKDLNIQTNFSDARDRI---------------FN 101
           F K++F    KLHQ E   L+ +    KDL+  T    ARDR+               ++
Sbjct: 237 FAKSDFNGVQKLHQREIGNLSKW---WKDLDFATKLPFARDRLVEAYFWILGVYFEPCYS 296

Query: 102 VERKILTKIIAISSILDETYDAYETFEELQFFTRAIQR---SIVDILPKYMKLLYIAMLN 161
           + R+I+TK+I+++SI+D+ YD Y T EELQ FT AI +   S +D LP+YMKL+Y  +L+
Sbjct: 297 LARRIMTKVISLTSIIDDIYDVYGTLEELQLFTEAINKWDISCMDFLPEYMKLIYQPLLD 356

Query: 162 LYKEISNEIGKDESSFTFIPPKKKVIILIKKLARSYFEEAKWLNKNYKPKLKEYREWVLH 213
           +Y EI  E  K+  +F     K++    ++K+ R+Y  EAKW + NY P  +EY E  L 
Sbjct: 357 VYDEIERETAKEGRAFCVNYGKEQ----MRKVVRAYLAEAKWFHNNYTPTFEEYMEVALV 416

[Close]
BLAST of CmaCh16G008200 vs. TAIR10
Match: AT4G16740.1 (AT4G16740.1 terpene synthase 03)

HSP 1 Score: 72.0 bits (175), Expect = 4.9e-13
Identity = 54/204 (26.47%), Postives = 96/204 (47.06%), Query Frame = 1 

Query: 19  KIKGKRVHINVLIRSFPFSNFAYFFKTEFQHKLHQNEGKELTMFIFICKDLNIQTNFSDA 78
           ++ G+R  +N ++      +F       F   +HQ+E K L+ +        +  +    
Sbjct: 232 EVYGERHDMNPILLELAKLDF------NFVQAIHQDELKSLSSW---WSKTGLTKHLDFV 291

Query: 79  RDRI---------------FNVERKILTKIIAISSILDETYDAYETFEELQFFTRAIQR- 138
           RDRI               F   R++LTK+  + + +D+ YD Y T EELQ FT  +++ 
Sbjct: 292 RDRITEGYFSSVGVMYEPEFAYHRQMLTKVFMLITTIDDIYDIYGTLEELQLFTTIVEKW 351

Query: 139 --SIVDILPKYMKLLYIAMLNLYKEISNEIGKDESSFTFIPPKKKVIILIKKLARSYFEE 198
             + ++ LP YMKL ++ ++N   +I   + +D+  F  IP  K+       +  ++ +E
Sbjct: 352 DVNRLEELPNYMKLCFLCLVNEINQIGYFVLRDK-GFNVIPYLKE---SWADMCTTFLKE 411

Query: 199 AKWLNKNYKPKLKEYRE--WVLHS 203
           AKW    YKP  +EY +  W+  S
Sbjct: 412 AKWYKSGYKPNFEEYMQNGWISSS 422

[Close]
BLAST of CmaCh16G008200 vs. TAIR10
Match: AT5G23960.1 (AT5G23960.1 terpene synthase 21)

HSP 1 Score: 71.6 bits (174), Expect = 6.4e-13
Identity = 43/132 (32.58%), Postives = 68/132 (51.52%), Query Frame = 1 

Query: 83  FNVERKILTKIIAISSILDETYDAYETFEELQFFTRAIQRSIVDI-----LPKYMKLLYI 142
           ++  R I T  + + + LD+ YDAY T EEL+ FT A+   +  +     +P  MK +Y 
Sbjct: 281 YSQARVITTMALILFTALDDMYDAYGTMEELELFTDAMDEWLPVVPDEIPIPDSMKFIYN 340

Query: 143 AMLNLYKEISNEIGKDESSFTFIPPKKKVIILIKKLARSYFEEAKWLNKNYKPKLKEYRE 202
             +  Y ++  E+ K+  S      KK     ++K A  Y +EAKWL K+Y     EY+E
Sbjct: 341 VTVEFYDKLDEELEKEGRSGCGFHLKKS----LQKTANGYMQEAKWLKKDYIATFDEYKE 400

Query: 203 WVLHSSGYSLIV 210
             + SSGY  ++
Sbjct: 401 NAILSSGYYALI 408

[Close]
BLAST of CmaCh16G008200 vs. TAIR10
Match: AT4G16730.1 (AT4G16730.1 terpene synthase 02)

HSP 1 Score: 70.9 bits (172), Expect = 1.1e-12
Identity = 61/210 (29.05%), Postives = 97/210 (46.19%), Query Frame = 1 

Query: 24  RVHINVLIRSFPFSNFAYFFKTEFQHKLHQNEGKELTMFIFICKDLNIQTNFSDARDRI- 83
           R +INV  +    +     F     + L  N  +EL +         +       RDRI 
Sbjct: 197 RWYINVYEKKHEMNPLLLEFAAIDFNMLQANHQEELKLISSWWNSTGLMKQLDFVRDRIT 256

Query: 84  --------------FNVERKILTKIIAISSILDETYDAYETFEELQFFTRAIQR---SIV 143
                         F   RKILTKI  +  I+D+ YD Y T EEL+ FT  +++   + V
Sbjct: 257 ESYFWTIGIFYEPEFKYCRKILTKIFMLIVIMDDIYDIYGTLEELELFTNVVEKWDVNHV 316

Query: 144 DILPKYMKLLYIAMLNLYKEISNEIGKD---ESSFTFIPPKKKVIILIKKLARSYFEEAK 203
           + LP YM++ +   L LY EI N+IG D   +     IP  K+V      L +++  E+K
Sbjct: 317 ERLPNYMRMCF---LFLYNEI-NQIGYDVLRDKGLNVIPYLKQV---WTDLFKTFLTESK 376

Query: 204 WLNKNYKPKLKEY-REWVLHSSGYSLIVNI 212
           W    +KP  +EY +  V+ SS  ++++++
Sbjct: 377 WYKTGHKPSFEEYMQNGVISSSVPTILLHL 399

[Close]
BLAST of CmaCh16G008200 vs. TAIR10
Match: AT1G70080.1 (AT1G70080.1 Terpenoid cyclases/Protein prenyltransferases superfamily protein)

HSP 1 Score: 70.9 bits (172), Expect = 1.1e-12
Identity = 38/118 (32.20%), Postives = 68/118 (57.63%), Query Frame = 1 

Query: 83  FNVERKILTKIIAISSILDETYDAYETFEELQFFTRAIQR---SIVDILPKYMKLLYIAM 142
           ++  R +L K I +  I+D T+D Y T +E++   +AI+R     VD+LP Y+K+++   
Sbjct: 345 YSAARIMLAKSIILVDIVDNTFDVYGTIDEVKSLVQAIERWDSDAVDVLPDYLKVVFRTT 404

Query: 143 LNLYKEISNEIGKDESSFTFIPPKKKVIILIKKLARSYFEEAKWLNKNYKPKLKEYRE 198
            +L+KE+   +  +  SFT     +++ IL+K     Y +EA+W N+ + P  +EY E
Sbjct: 405 FDLFKELEEYVSSEARSFTMQYAYEQLRILMK----GYLQEAEWSNRGHLPSHEEYIE 458

[Close]
BLAST of CmaCh16G008200 vs. TAIR10
Match: AT3G25830.1 (AT3G25830.1 terpene synthase-like sequence-1,8-cineole)

HSP 1 Score: 68.9 bits (167), Expect = 4.2e-12
Identity = 51/135 (37.78%), Postives = 74/135 (54.81%), Query Frame = 1 

Query: 83  FNVERKILTKIIAISSILDETYDAYETFEELQFFTRAIQRSIVDIL---PKYMKLLYIAM 142
           F   R+I+T + A+ + +D+ YD Y T EEL+ FT  ++   V+ L   P+YM+L ++  
Sbjct: 324 FGYIRRIMTIVNALVTTIDDIYDIYGTLEELELFTSMVENWDVNRLGELPEYMRLCFLI- 383

Query: 143 LNLYKEISNEIGKDESSFTFIPPKKKVIILIKK----LARSYFEEAKWLNKNYKPKLKEY 202
             LY EI N IG D   +     K  VI  +KK    L R+Y  EAKW  + YKP L+EY
Sbjct: 384 --LYNEI-NGIGCDILKYK----KIDVIPYLKKSWADLCRTYLVEAKWYKRGYKPSLEEY 443

Query: 203 RE--WVLHSSGYSLI 209
            +  W+  S+   LI
Sbjct: 444 MQNAWISISAPTILI 450

[Close]
BLAST of CmaCh16G008200 vs. NCBI nr
Match: gi|778676208|ref|XP_011650545.1| (PREDICTED: (+)-gamma-cadinene synthase [Cucumis sativus])

HSP 1 Score: 160.2 bits (404), Expect = 3.9e-36
Identity = 97/191 (50.79%), Postives = 122/191 (63.87%), Query Frame = 1 

Query: 42  FFKTEFQ--HKLHQNEGKELTMFIFICKDLNIQTNFSDARDRI---------------FN 101
           F K +F    KLHQ E  E+  +    KDL++ T F  ARDRI               +N
Sbjct: 237 FSKLDFNILQKLHQKELSEICRW---WKDLDVPTKFPFARDRIVECYFWTLGAYFEPQYN 296

Query: 102 VERKILTKIIAISSILDETYDAYETFEELQFFTRAIQR---SIVDILPKYMKLLYIAMLN 161
           V RK+LTK+IAISSILD+ YDAY TFEELQ    AIQR   S+V  LP+YMK  Y+AM  
Sbjct: 297 VGRKMLTKVIAISSILDDIYDAYGTFEELQVLAPAIQRWDRSMVHTLPEYMKPFYVAMFE 356

Query: 162 LYKEISNEIGKDESSFTFIPPKKKVIILIKKLARSYFEEAKWLNKNYKPKLKEYREWVLH 213
           +Y+EIS EIGKD++S       +  I  IKKL+ SYFEEAKWLNK YKP  KEY E  L+
Sbjct: 357 VYEEISKEIGKDQNSLHL----QVAIGGIKKLSESYFEEAKWLNKKYKPSFKEYMELALN 416

[Close]
BLAST of CmaCh16G008200 vs. NCBI nr
Match: gi|745672488|gb|AJD19682.1| (sesquiterpene synthase Tps1 [Cucumis melo])

HSP 1 Score: 154.8 bits (390), Expect = 1.6e-34
Identity = 93/191 (48.69%), Postives = 122/191 (63.87%), Query Frame = 1 

Query: 42  FFKTEFQ--HKLHQNEGKELTMFIFICKDLNIQTNFSDARDRI---------------FN 101
           F K +F    KLHQ E  E+  +    KDLN+ TNF  ARD+I               F 
Sbjct: 250 FSKLDFNALQKLHQKELAEICRW---WKDLNVSTNFPFARDQIVECYFWILSIYFEPRFK 309

Query: 102 VERKILTKIIAISSILDETYDAYETFEELQFFTRAIQR---SIVDILPKYMKLLYIAMLN 161
             RKILTK+IA++SI+D+ YDAY TFEELQ FT AI+R   S++++LPKYMK+ Y  +L+
Sbjct: 310 FGRKILTKVIAMTSIMDDIYDAYGTFEELQVFTLAIKRWDMSMINLLPKYMKVYYTTLLD 369

Query: 162 LYKEISNEIGKDESSFTFIPPKKKVIILIKKLARSYFEEAKWLNKNYKPKLKEYREWVLH 213
           L++EI  EI  DE+S+ F   K+ +    K+ A SYF+EA+WLNKNYKPK +EY E  L 
Sbjct: 370 LFEEIDKEIVNDETSYRFHFAKEAM----KRQAESYFKEAEWLNKNYKPKYEEYMEVALA 429

[Close]
BLAST of CmaCh16G008200 vs. NCBI nr
Match: gi|661902982|ref|NP_001284382.1| ((+)-gamma-cadinene synthase [Cucumis melo])

HSP 1 Score: 153.7 bits (387), Expect = 3.6e-34
Identity = 94/191 (49.21%), Postives = 120/191 (62.83%), Query Frame = 1 

Query: 42  FFKTEFQ--HKLHQNEGKELTMFIFICKDLNIQTNFSDARDRI---------------FN 101
           F K +F    KLHQ E  E+  +    KDL++ T F  ARDRI               ++
Sbjct: 250 FSKLDFNILQKLHQKELSEICRW---WKDLDVPTKFPFARDRIVECYFWTLGAYFEPQYS 309

Query: 102 VERKILTKIIAISSILDETYDAYETFEELQFFTRAIQR---SIVDILPKYMKLLYIAMLN 161
           V RK+LTK+IAI+SILD+ YDAY TFEELQ  T AIQR   S+V  LP YMK  Y+AML 
Sbjct: 310 VGRKMLTKVIAIASILDDIYDAYGTFEELQVLTPAIQRWDRSMVHTLPLYMKPFYVAMLE 369

Query: 162 LYKEISNEIGKDESSFTFIPPKKKVIILIKKLARSYFEEAKWLNKNYKPKLKEYREWVLH 213
           LY+EI  EI KD++S       +  I  IK+L+ SYFEEAKWLNK YKP  KEY E  L 
Sbjct: 370 LYEEIGKEIDKDQNSLHL----QVAIGGIKRLSESYFEEAKWLNKEYKPSFKEYMELALK 429

[Close]
BLAST of CmaCh16G008200 vs. NCBI nr
Match: gi|659102820|ref|XP_008452330.1| (PREDICTED: (+)-gamma-cadinene synthase-like [Cucumis melo])

HSP 1 Score: 153.3 bits (386), Expect = 4.8e-34
Identity = 93/191 (48.69%), Postives = 121/191 (63.35%), Query Frame = 1 

Query: 42  FFKTEFQ--HKLHQNEGKELTMFIFICKDLNIQTNFSDARDRI---------------FN 101
           F K +F    KLHQ E  E+  +    KDLN+ TNF  ARDRI               F 
Sbjct: 250 FSKLDFNTLQKLHQKELAEICRW---WKDLNVSTNFPFARDRIVECYFWILSIYFEPHFK 309

Query: 102 VERKILTKIIAISSILDETYDAYETFEELQFFTRAIQR---SIVDILPKYMKLLYIAMLN 161
             RKILTK+IA++SI+D+ YDAY TFEELQ FT AI+R   S++++LPKYMK+ Y  +L+
Sbjct: 310 FGRKILTKVIAMTSIMDDIYDAYGTFEELQVFTLAIKRWDMSMINLLPKYMKVYYTTLLD 369

Query: 162 LYKEISNEIGKDESSFTFIPPKKKVIILIKKLARSYFEEAKWLNKNYKPKLKEYREWVLH 213
           L++EI  EI  DE+S+     K+ +    K+ A SYF+EA+WLNKNYKPK +EY E  L 
Sbjct: 370 LFEEIDKEIVNDETSYRSHFAKEAM----KRQAESYFKEAEWLNKNYKPKYEEYMEVALA 429

[Close]
BLAST of CmaCh16G008200 vs. NCBI nr
Match: gi|659102883|ref|XP_008452366.1| (PREDICTED: LOW QUALITY PROTEIN: (+)-gamma-cadinene synthase-like [Cucumis melo])

HSP 1 Score: 144.4 bits (363), Expect = 2.2e-31
Identity = 89/191 (46.60%), Postives = 119/191 (62.30%), Query Frame = 1 

Query: 42  FFKTEFQ--HKLHQNEGKELTMFIFICKDLNIQTNFSDARDRI---------------FN 101
           F K +F    KLHQ E  E+  +    +DLN+ TNFS ARDRI               F 
Sbjct: 101 FSKLDFNVLQKLHQTELAEICRW---WEDLNVPTNFSFARDRIVECYFWILSIYFEPHFK 160

Query: 102 VERKILTKIIAISSILDETYDAYETFEELQFFTRAIQR---SIVDILPKYMKLLYIAMLN 161
             RKI TK++A++SI+D+ YDAY  FEELQ FT AI+R   S+V+ILP+ MK+ Y  +L+
Sbjct: 161 FGRKIFTKVVAMTSIMDDIYDAYGIFEELQVFTLAIKRWDMSMVNILPECMKVYYTTLLD 220

Query: 162 LYKEISNEIGKDESSFTFIPPKKKVIILIKKLARSYFEEAKWLNKNYKPKLKEYREWVLH 213
           L++EI  E  KD +S+    P +    ++K+ A SYF+EA+WLNKNYKPK +EY E  L 
Sbjct: 221 LFEEIDKERVKDGTSYRSYFPNE----VMKRQAESYFKEAEWLNKNYKPKYEEYMEVALA 280

The following BLAST results are available for this feature:
BLAST of CmaCh16G008200 vs. Swiss-Prot
Match NameE-valueIdentityDescription
GCSY1_CUCME2.3e-3649.21(+)-gamma-cadinene synthase OS=Cucumis melo PE=1 SV=1[more]
TPSGD_VITVI2.9e-2337.02(-)-germacrene D synthase OS=Vitis vinifera GN=VIT_19s0014g04930 PE=1 SV=1[more]
TPS1_PHYDL2.9e-2341.24Bifunctional sesquiterpene synthase 1 OS=Phyla dulcis PE=1 SV=1[more]
TPS6_PHYDL8.4e-2337.22Beta-caryophyllene synthase OS=Phyla dulcis PE=1 SV=1[more]
TPSVS_VITVI1.4e-2238.33Valencene synthase OS=Vitis vinifera GN=ValCS PE=1 SV=1[more]
BLAST of CmaCh16G008200 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L2I8_CUCSA2.7e-3650.79Uncharacterized protein OS=Cucumis sativus GN=Csa_3G097540 PE=3 SV=1[more]
A0A0B4VEV4_CUCME1.1e-3448.69Sesquiterpene synthase Tps1 OS=Cucumis melo PE=2 SV=1[more]
A0A0A0L579_CUCSA2.6e-3147.12Uncharacterized protein OS=Cucumis sativus GN=Csa_3G097040 PE=3 SV=1[more]
Q66PX8_CUCSA3.4e-3147.12Beta-caryophyllene synthase OS=Cucumis sativus PE=2 SV=1[more]
U3MLM5_COPLA4.1e-2437.70Terpene synthase 4-2 OS=Copaifera langsdorffii GN=TPS4-2 PE=2 SV=1[more]
BLAST of CmaCh16G008200 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G16740.14.9e-1326.47 terpene synthase 03[more]
AT5G23960.16.4e-1332.58 terpene synthase 21[more]
AT4G16730.11.1e-1229.05 terpene synthase 02[more]
AT1G70080.11.1e-1232.20 Terpenoid cyclases/Protein prenyltransferases superfamily protein[more]
AT3G25830.14.2e-1237.78 terpene synthase-like sequence-1,8-cineole[more]
BLAST of CmaCh16G008200 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|778676208|ref|XP_011650545.1|3.9e-3650.79PREDICTED: (+)-gamma-cadinene synthase [Cucumis sativus][more]
gi|745672488|gb|AJD19682.1|1.6e-3448.69sesquiterpene synthase Tps1 [Cucumis melo][more]
gi|661902982|ref|NP_001284382.1|3.6e-3449.21(+)-gamma-cadinene synthase [Cucumis melo][more]
gi|659102820|ref|XP_008452330.1|4.8e-3448.69PREDICTED: (+)-gamma-cadinene synthase-like [Cucumis melo][more]
gi|659102883|ref|XP_008452366.1|2.2e-3146.60PREDICTED: LOW QUALITY PROTEIN: (+)-gamma-cadinene synthase-like [Cucumis melo][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR005630Terpene_synthase_metal-bd
IPR008949Isoprenoid_synthase_dom_sf
Vocabulary: Molecular Function
TermDefinition
GO:0000287magnesium ion binding
GO:0010333terpene synthase activity
GO:0016829lyase activity
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0045338 farnesyl diphosphate metabolic process
biological_process GO:0051762 sesquiterpene biosynthetic process
cellular_component GO:0005575 cellular_component
molecular_function GO:0000287 magnesium ion binding
molecular_function GO:0010334 sesquiterpene synthase activity
molecular_function GO:0016829 lyase activity
molecular_function GO:0010333 terpene synthase activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh16G008200.1CmaCh16G008200.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005630Terpene synthase, metal-binding domainPFAMPF03936Terpene_synth_Ccoord: 86..210
score: 2.6
IPR008949Isoprenoid synthase domainGENE3DG3DSA:1.10.600.10coord: 50..211
score: 9.1
IPR008949Isoprenoid synthase domainunknownSSF48576Terpenoid synthasescoord: 49..209
score: 9.21
NoneNo IPR availablePANTHERPTHR31225FAMILY NOT NAMEDcoord: 50..212
score: 4.3
NoneNo IPR availablePANTHERPTHR31225:SF15ALPHA-HUMULENE/(-)-(E)-BETA-CARYOPHYLLENE SYNTHASEcoord: 50..212
score: 4.3

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmaCh16G008200CmoCh16G008770Cucurbita moschata (Rifu)cmacmoB322
CmaCh16G008200CmoCh16G009300Cucurbita moschata (Rifu)cmacmoB324
CmaCh16G008200Lsi05G006560Bottle gourd (USVL1VR-Ls)cmalsiB315
CmaCh16G008200Cp4.1LG14g00090Cucurbita pepo (Zucchini)cmacpeB344
CmaCh16G008200MELO3C016588.2Melon (DHL92) v3.6.1cmamedB345
CmaCh16G008200Cla97C10G190250Watermelon (97103) v2cmawmbB336
CmaCh16G008200Bhi11G000561Wax gourdcmawgoB0421
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CmaCh16G008200Wax gourdcmawgoB0417
CmaCh16G008200Cucurbita maxima (Rimu)cmacmaB041
CmaCh16G008200Cucurbita maxima (Rimu)cmacmaB339
CmaCh16G008200Cucurbita maxima (Rimu)cmacmaB350
CmaCh16G008200Cucumber (Gy14) v1cgycmaB0121
CmaCh16G008200Cucumber (Gy14) v1cgycmaB0337
CmaCh16G008200Cucurbita moschata (Rifu)cmacmoB317
CmaCh16G008200Cucurbita moschata (Rifu)cmacmoB328
CmaCh16G008200Cucurbita moschata (Rifu)cmacmoB337
CmaCh16G008200Wild cucumber (PI 183967)cmacpiB324
CmaCh16G008200Wild cucumber (PI 183967)cmacpiB334
CmaCh16G008200Cucumber (Chinese Long) v2cmacuB318
CmaCh16G008200Cucumber (Chinese Long) v2cmacuB328
CmaCh16G008200Melon (DHL92) v3.5.1cmameB292
CmaCh16G008200Watermelon (Charleston Gray)cmawcgB283
CmaCh16G008200Watermelon (Charleston Gray)cmawcgB294
CmaCh16G008200Watermelon (Charleston Gray)cmawcgB298
CmaCh16G008200Watermelon (97103) v1cmawmB306
CmaCh16G008200Cucurbita pepo (Zucchini)cmacpeB350
CmaCh16G008200Cucurbita pepo (Zucchini)cmacpeB356
CmaCh16G008200Cucurbita pepo (Zucchini)cmacpeB362
CmaCh16G008200Cucumber (Gy14) v2cgybcmaB084
CmaCh16G008200Cucumber (Gy14) v2cgybcmaB341
CmaCh16G008200Melon (DHL92) v3.6.1cmamedB330
CmaCh16G008200Silver-seed gourdcarcmaB0946
CmaCh16G008200Silver-seed gourdcarcmaB1243
CmaCh16G008200Cucumber (Chinese Long) v3cmacucB0371
CmaCh16G008200Cucumber (Chinese Long) v3cmacucB0382
CmaCh16G008200Watermelon (97103) v2cmawmbB343