CmaCh16G007880 (gene) Cucurbita maxima (Rimu)

NameCmaCh16G007880
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu))
DescriptionUnknown protein
LocationCma_Chr16 : 4326598 .. 4328391 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAGAGAATGATGGCCCAAGCCCTCGAACCGTCCGGACTCAGAGGCTTACCGCAGCAAAAGCAGCGGCTAGCCACCATTATGAGGATCTGGCTAGCCATCAGGAAGAGAAATGCTCCAACTCCCAAGCCAGTTGAAATGTCTGAGTCATATACACAATAGTTTTTTTTGGCATCAGTGTCTTCAACTATCTTTGCCTGTGAAATCATTTCAAATCAAATGGAATTAAAATAATTATGAACTCTTTAGAACATTCAAAGTTTTTTTAGAGATAAATATCTTGTCCTTCGTAGAACAGATAAGAATGCAAAGTACTTCAACTAAATCTTTTACAAAAAGAAGACAATTATTGACCTTTCAAACAGTTCCCCACTGAGTTATGAGTTTGGCTGTTCTTGTTGGGAGCAGGTAAAGAAAGTGAGGGGAAAGTAATGGCTTGTGGATCAAAAACAAACAATGTGGGGCTTAAGAAGATCAGATCTGCCTTTGAAGAAGAATTCATCTTTAGATTTGTCTTTGAGATCCCACGTTAGTTGGGAAGAGAACGAAACATTCTTTAAAAGGGCGTAGAAACCTCTCTCTATCATATGCATTTTAAAACCTTGAAGGGGAGCTTAGAAGGGAAAGCTTAAAGAGGACAATATTAACTAACAGTGGGCTTGGGCGGTTACAAATGATATTAGAGCCAGACAACGAGCGATGTGCCAACGAGGAGGCTGAACCCCGAAGGGGGGTGGACACAAAGTGTGCTAGCAAGAACGCTGGGCTCAAAGAGGTGAGTGGAATGGGAGTCCCACATCGATTAGAGAAGGGAACAAGTGCCGACGAAGATGCTGGGCCCTAAAGGGGGTAGATAGTGAGATCCCATATTGGTTGGAGAGGAAAACGAAATATTCTTTATAAGGGTCGAAACCTCTCCCTAGCATACGCATTTTAAAACATTGAGTGGAAGCTAAAAGGGAAAGTCCAAAAAGAACAATATTTGTTACCAGCGGGCTTAGACTTTTACAAGATCTCTCCTTAAAGCAATCTCAACCTAGTGATTAAGTATCCTTAAACGAAAGAGTAGTCTTTCAAGATTTGCAAATCTCACATCGAAGAAGGTTCGTAGAAGCTCGTTCTCCGCCCCGAATAATATCGGTACCACGGTTAAGCATCGTTACATGAAAAGAGTAGTTTTTCGAGATTTGTTATGGTATATCACAACCTCCCATCTTATCTTACACAATCAATCCCAATAACAAAACACTATCAGAATCACACAACAACACACACTCGATCTAGAAGAACCTGAAGAACACAAAGAACTCAAAAAGTGCATTGAAATTATGTGTTATCATTCACAATTAGTTTCTGTACGAGCAGGACAATTGGCGTTTAAGAAAAACAATAAAAGTAGATCTGAGCGCTTTTCCAGCTGAGAAAAGTAGCGGGAAAGTTCTAAATCCCTTAAACCTAAAAACCCAATGGTGAAGGGAAAGGCTGTAGCCTCATATTCCGTCTCTGCATTCAGAACCCATATTAAGAGCCAAATGAACTAAGCAAACCCAGAAGAGAAAGGCCATAGATCACCAAGATTTGAAGTAAAGCCACAAATTTTCACTAAAATATGCAACAATAAAGCGAAGTAAAGAGAGAGGGGAAAAGAGTAAGAGCTTTACAGTGCTTCTCCTTTGCTCAGCTGCAATGGCTAACCCAAAAGCGATGACATCAAACACAAAGACTGAGAGAAGGAGTAGCTTTGACGCCATTGTTGAGCAGTTTAAGAGCTTCGCAGATCTGTTTCTTCCTTGA

mRNA sequence

ATGAAGAGAATGATGGCCCAAGCCCTCGAACCGTCCGGACTCAGAGGCTTACCGCAGCAAAAGCAGCGGCTAGCCACCATTATGAGGATCTGGCTAGCCATCAGGAAGAGAAATGCTCCAACTCCCAAGCCACGAAGTAAAGAGAGAGGGGAAAAGAGTAAGAGCTTTACAGTGCTTCTCCTTTGCTCAGCTGCAATGGCTAACCCAAAAGCGATGACATCAAACACAAAGACTGAGAGAAGGAGTAGCTTTGACGCCATTGTTGAGCAGTTTAAGAGCTTCGCAGATCTGTTTCTTCCTTGA

Coding sequence (CDS)

ATGAAGAGAATGATGGCCCAAGCCCTCGAACCGTCCGGACTCAGAGGCTTACCGCAGCAAAAGCAGCGGCTAGCCACCATTATGAGGATCTGGCTAGCCATCAGGAAGAGAAATGCTCCAACTCCCAAGCCACGAAGTAAAGAGAGAGGGGAAAAGAGTAAGAGCTTTACAGTGCTTCTCCTTTGCTCAGCTGCAATGGCTAACCCAAAAGCGATGACATCAAACACAAAGACTGAGAGAAGGAGTAGCTTTGACGCCATTGTTGAGCAGTTTAAGAGCTTCGCAGATCTGTTTCTTCCTTGA

Protein sequence

MKRMMAQALEPSGLRGLPQQKQRLATIMRIWLAIRKRNAPTPKPRSKERGEKSKSFTVLLLCSAAMANPKAMTSNTKTERRSSFDAIVEQFKSFADLFLP
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh16G007880.1CmaCh16G007880.1mRNA


The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmaCh16G007880Lsi05G007080Bottle gourd (USVL1VR-Ls)cmalsiB315
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CmaCh16G007880Cucumber (Chinese Long) v3cmacucB0371
CmaCh16G007880Cucumber (Chinese Long) v3cmacucB0382
CmaCh16G007880Watermelon (97103) v2cmawmbB336
CmaCh16G007880Watermelon (97103) v2cmawmbB343
CmaCh16G007880Wax gourdcmawgoB0423
CmaCh16G007880Wax gourdcmawgoB0414
CmaCh16G007880Cucurbita maxima (Rimu)cmacmaB041
CmaCh16G007880Cucurbita maxima (Rimu)cmacmaB350
CmaCh16G007880Cucumber (Gy14) v1cgycmaB0121
CmaCh16G007880Cucumber (Gy14) v1cgycmaB0337
CmaCh16G007880Cucurbita moschata (Rifu)cmacmoB317
CmaCh16G007880Cucurbita moschata (Rifu)cmacmoB322
CmaCh16G007880Cucurbita moschata (Rifu)cmacmoB337
CmaCh16G007880Wild cucumber (PI 183967)cmacpiB324
CmaCh16G007880Wild cucumber (PI 183967)cmacpiB334
CmaCh16G007880Cucumber (Chinese Long) v2cmacuB318
CmaCh16G007880Cucumber (Chinese Long) v2cmacuB328
CmaCh16G007880Melon (DHL92) v3.5.1cmameB292
CmaCh16G007880Watermelon (Charleston Gray)cmawcgB283
CmaCh16G007880Watermelon (Charleston Gray)cmawcgB294
CmaCh16G007880Watermelon (97103) v1cmawmB306
CmaCh16G007880Watermelon (97103) v1cmawmB309
CmaCh16G007880Cucurbita pepo (Zucchini)cmacpeB344
CmaCh16G007880Cucurbita pepo (Zucchini)cmacpeB350
CmaCh16G007880Cucurbita pepo (Zucchini)cmacpeB362
CmaCh16G007880Cucumber (Gy14) v2cgybcmaB084
CmaCh16G007880Cucumber (Gy14) v2cgybcmaB341
CmaCh16G007880Melon (DHL92) v3.6.1cmamedB330
CmaCh16G007880Melon (DHL92) v3.6.1cmamedB345
CmaCh16G007880Silver-seed gourdcarcmaB0660
CmaCh16G007880Silver-seed gourdcarcmaB0946
CmaCh16G007880Silver-seed gourdcarcmaB1243