CmaCh16G006680 (gene) Cucurbita maxima (Rimu)

Overview
NameCmaCh16G006680
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu))
DescriptionMitochondrial transcription termination factor family protein, putative
LocationCma_Chr16 : 3485373 .. 3486536 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTACGCGCTGAGATCATCGTTCTCTATTTCCTCTCGCCATAATCCTCCCTCCTTGCTCCGAATTGATCCTCTCTTGTACTGTTTCTTCTCTTCTTCTTCCCACAGCCAAGCCTCTGCTTCATATGGAATCGTCGTTCAATACCTTATTGATACCTTTGAACTCTCCCCCGCCAGAGCGGTGTCGATTATGAGCAGCCGTAGAGGCATTGCATCAACGGAAAAGCCTCAATCCGTTTACAAATATCTTTCAGAGCTCGGATTCTCCGAAGCTCACATTCAATCGACGATTCGCCTTGCGCCGCAGATCGCGTTTTCCAACATCGAAAAGACTCTGAAGCCGAAGATCGAGTTCTTCCAGAATCTTGGCTTGGTCGGCTCCGATTTGGGTAGGTTCATTTCCAAGCATTCTACGCTTTTGACTATTAGTTTGGAAAAGAGATTGATGCCTAGTGTTGAGATTCTTAAGAGTGTTTTCCCCAAGGATGAGTGTAATAGCGATCTCCTACAAGTTTTGCGGCGATGTTCTGATATGCTTATGCGATCTCCGTATACAAGGTTGCCTGTCAATATTAATTACTTACAAAGTTGTGGGATTGTTGGTTCTCAACTCTCTATGTTACTGAAGAGGCAACCTGCACTTTTTGGTATGCGTGAATCTCAAGTTAGAGATCTTGTTTCTATGGTTGTAGAGACGGGTTTTTCTACAAATACTAGAATGTTTGTTCATGGACTTCATGCTATCAGTAGTGTAAGTAATGCGACCTTCAAGAAGAAAGTGGAATTGATTTGCAGCTTTGGAATAACTGAGAAAGAATGTATGAGAATGTTTACTTCTGCTCCTGTTTTGATAAGAACCTCCGTTGGTAAACTTAAACGAGGTCTAGAATTCTTTATGAATGAGGCAGAAGTCAGCAGATCAGATATTGTTCGTAAACCTACTTGTTTGATGCACGCCATGCAGGGGAGGGTGCTCCCTCGGTATAGAGTTCTTCAGGTCGTAAACTCGAAGAGGCTATCGAAGAAACACCTGCAATTGATCGATATATTGGGGATGTCTGATGAGAATTTCTTGGATAAATTCGTGCACAGGTTTCCTGATCAGGTGACAGAATTGTTGGCGGCCTTTAGAGGTCAATGTATGGATGAATTGCAGCCTAAGTAG

mRNA sequence

ATGTACGCGCTGAGATCATCGTTCTCTATTTCCTCTCGCCATAATCCTCCCTCCTTGCTCCGAATTGATCCTCTCTTGTACTGTTTCTTCTCTTCTTCTTCCCACAGCCAAGCCTCTGCTTCATATGGAATCGTCGTTCAATACCTTATTGATACCTTTGAACTCTCCCCCGCCAGAGCGGTGTCGATTATGAGCAGCCGTAGAGGCATTGCATCAACGGAAAAGCCTCAATCCGTTTACAAATATCTTTCAGAGCTCGGATTCTCCGAAGCTCACATTCAATCGACGATTCGCCTTGCGCCGCAGATCGCGTTTTCCAACATCGAAAAGACTCTGAAGCCGAAGATCGAGTTCTTCCAGAATCTTGGCTTGGTCGGCTCCGATTTGGGTAGGTTCATTTCCAAGCATTCTACGCTTTTGACTATTAGTTTGGAAAAGAGATTGATGCCTAGTGTTGAGATTCTTAAGAGTGTTTTCCCCAAGGATGAGTGTAATAGCGATCTCCTACAAGTTTTGCGGCGATGTTCTGATATGCTTATGCGATCTCCGTATACAAGGTTGCCTGTCAATATTAATTACTTACAAAGTTGTGGGATTGTTGGTTCTCAACTCTCTATGTTACTGAAGAGGCAACCTGCACTTTTTGGTATGCGTGAATCTCAAGTTAGAGATCTTGTTTCTATGGTTGTAGAGACGGGTTTTTCTACAAATACTAGAATGTTTGTTCATGGACTTCATGCTATCAGTAGTGTAAGTAATGCGACCTTCAAGAAGAAAGTGGAATTGATTTGCAGCTTTGGAATAACTGAGAAAGAATGTATGAGAATGTTTACTTCTGCTCCTGTTTTGATAAGAACCTCCGTTGGTAAACTTAAACGAGGTCTAGAATTCTTTATGAATGAGGCAGAAGTCAGCAGATCAGATATTGTTCGTAAACCTACTTGTTTGATGCACGCCATGCAGGGGAGGGTGCTCCCTCGGTATAGAGTTCTTCAGGTCGTAAACTCGAAGAGGCTATCGAAGAAACACCTGCAATTGATCGATATATTGGGGATGTCTGATGAGAATTTCTTGGATAAATTCGTGCACAGGTTTCCTGATCAGGTGACAGAATTGTTGGCGGCCTTTAGAGGTCAATGTATGGATGAATTGCAGCCTAAGTAG

Coding sequence (CDS)

ATGTACGCGCTGAGATCATCGTTCTCTATTTCCTCTCGCCATAATCCTCCCTCCTTGCTCCGAATTGATCCTCTCTTGTACTGTTTCTTCTCTTCTTCTTCCCACAGCCAAGCCTCTGCTTCATATGGAATCGTCGTTCAATACCTTATTGATACCTTTGAACTCTCCCCCGCCAGAGCGGTGTCGATTATGAGCAGCCGTAGAGGCATTGCATCAACGGAAAAGCCTCAATCCGTTTACAAATATCTTTCAGAGCTCGGATTCTCCGAAGCTCACATTCAATCGACGATTCGCCTTGCGCCGCAGATCGCGTTTTCCAACATCGAAAAGACTCTGAAGCCGAAGATCGAGTTCTTCCAGAATCTTGGCTTGGTCGGCTCCGATTTGGGTAGGTTCATTTCCAAGCATTCTACGCTTTTGACTATTAGTTTGGAAAAGAGATTGATGCCTAGTGTTGAGATTCTTAAGAGTGTTTTCCCCAAGGATGAGTGTAATAGCGATCTCCTACAAGTTTTGCGGCGATGTTCTGATATGCTTATGCGATCTCCGTATACAAGGTTGCCTGTCAATATTAATTACTTACAAAGTTGTGGGATTGTTGGTTCTCAACTCTCTATGTTACTGAAGAGGCAACCTGCACTTTTTGGTATGCGTGAATCTCAAGTTAGAGATCTTGTTTCTATGGTTGTAGAGACGGGTTTTTCTACAAATACTAGAATGTTTGTTCATGGACTTCATGCTATCAGTAGTGTAAGTAATGCGACCTTCAAGAAGAAAGTGGAATTGATTTGCAGCTTTGGAATAACTGAGAAAGAATGTATGAGAATGTTTACTTCTGCTCCTGTTTTGATAAGAACCTCCGTTGGTAAACTTAAACGAGGTCTAGAATTCTTTATGAATGAGGCAGAAGTCAGCAGATCAGATATTGTTCGTAAACCTACTTGTTTGATGCACGCCATGCAGGGGAGGGTGCTCCCTCGGTATAGAGTTCTTCAGGTCGTAAACTCGAAGAGGCTATCGAAGAAACACCTGCAATTGATCGATATATTGGGGATGTCTGATGAGAATTTCTTGGATAAATTCGTGCACAGGTTTCCTGATCAGGTGACAGAATTGTTGGCGGCCTTTAGAGGTCAATGTATGGATGAATTGCAGCCTAAGTAG

Protein sequence

MYALRSSFSISSRHNPPSLLRIDPLLYCFFSSSSHSQASASYGIVVQYLIDTFELSPARAVSIMSSRRGIASTEKPQSVYKYLSELGFSEAHIQSTIRLAPQIAFSNIEKTLKPKIEFFQNLGLVGSDLGRFISKHSTLLTISLEKRLMPSVEILKSVFPKDECNSDLLQVLRRCSDMLMRSPYTRLPVNINYLQSCGIVGSQLSMLLKRQPALFGMRESQVRDLVSMVVETGFSTNTRMFVHGLHAISSVSNATFKKKVELICSFGITEKECMRMFTSAPVLIRTSVGKLKRGLEFFMNEAEVSRSDIVRKPTCLMHAMQGRVLPRYRVLQVVNSKRLSKKHLQLIDILGMSDENFLDKFVHRFPDQVTELLAAFRGQCMDELQPK
Homology
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BLAST of CmaCh16G006680 vs. Swiss-Prot
Match: MTEF2_ARATH (Transcription termination factor MTERF2, chloroplastic OS=Arabidopsis thaliana GN=MTERF2 PE=3 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 1.4e-07
Identity = 52/210 (24.76%), Postives = 92/210 (43.81%), Query Frame = 1 

Query: 69  GIASTEKPQSVYKYLSELGFSEAHIQSTIRLAPQIAFSNIEKTLKPKIEFFQNLGLVGSD 128
           G +  E+ + + KY   LG  +  ++  + + P +   ++EKT+ PK+ F Q +G+    
Sbjct: 381 GCSIEERWKPLVKYFYYLGIPKEGMKRILVVKPILYCIDLEKTIAPKVRFLQEMGIPNEA 440

Query: 129 LGRFISKHSTLLTISLEKRLMPSVEILKSVFPKDECNSDLLQVLRRCSDMLMRSPYTRLP 188
           +G  + K  +LLT SL K++ P V  L  +        D+ +V+     +L  S  T+L 
Sbjct: 441 IGNMLVKFPSLLTNSLYKKIRPVVIFL--LTRAGVTQKDIGKVIAMDPALLGCSIGTKLE 500

Query: 189 VNINYLQSCGIVGSQLSMLLKRQPALFG------------MRESQVRDLVSMV-VETGFS 248
            N+ Y  S GI   QL  ++   P L              +R + +R L  ++     FS
Sbjct: 501 PNMRYYISLGIRFYQLGEMIADFPMLLRYNVDNLRPKYRYLRRTMIRPLQDLIEFPRFFS 560

Query: 249 TNTRMFVHGLHAISSVSNATFKKKVELICS 266
            +    +   H I   +   FK +  L C+
Sbjct: 561 YSLERRIIPRHTIMVENRVNFKLRYMLACT 588

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BLAST of CmaCh16G006680 vs. Swiss-Prot
Match: MTEF5_ARATH (Transcription termination factor MTERF5, chloroplastic OS=Arabidopsis thaliana GN=MTERF5 PE=2 SV=1)

HSP 1 Score: 57.0 bits (136), Expect = 5.3e-07
Identity = 65/303 (21.45%), Postives = 129/303 (42.57%), Query Frame = 1 

Query: 51  DTFELSPARAVSIMSSRRGIASTEKPQSVYKYLSELGFSEAHIQSTIRLAPQIAFSNIEK 110
           DT +L     VS + +   +    +PQ++Y  L +LG +   I++  R      + +++ 
Sbjct: 177 DTRKLRAVSRVSELDTEGAL----RPQTLY--LLDLGLNLEQIKTITRKFAAFPYYSLDG 236

Query: 111 TLKPKIEFFQNLGLVGSDLGRFISKHSTLLTISLEKRLMPSVEILKSVFPKDECNSDLLQ 170
            +KP +EF  +LG+  SD+   + K   +  ISL   L P++  L+++       +   +
Sbjct: 237 KIKPVVEFLLDLGIPKSDIPTILCKRPQICGISLTDNLKPTMAFLETL---GIDKNQWAK 296

Query: 171 VLRRCSDMLMRSPYTRLPVNINYLQSCGIVGSQLSMLLKRQPALFGMRESQVRDLVSMVV 230
           ++ R   +L  S   +L   + +L   G+   Q+  +L R P +       V D +   +
Sbjct: 297 IISRFPAILTYS-RQKLTSTVEFLSQTGLTEEQIGRILTRCPNIMSY---SVEDKLRPTM 356

Query: 231 ETGFSTNTRMFVHGLHAISSVSNATFKKKVELICSF----GITEKECMRMFTSAPVLIRT 290
           E   S N  + V  LH        + +  ++ +  F    G    E   M +    L   
Sbjct: 357 EYFRSLNVDVAVL-LHRCPQTFGLSIESNLKPVTEFFLEKGFGLDEIGIMISRYGALYTF 416

Query: 291 SVGKLKRGLEFFMNEAEVSRSDIVRKPTCLMHAMQGRVLPRYRVLQVVNSKRLSKKHLQL 350
           S+ +       +    +  +S++V+ P    +++Q R+ PRY ++Q    + L  + L L
Sbjct: 417 SLKENVMPKWDYFQTMDYPKSELVKFPQFFGYSLQERIKPRYELVQRSGVRLLLNQVLSL 465

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BLAST of CmaCh16G006680 vs. TrEMBL
Match: A0A0A0KUB9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G036600 PE=4 SV=1)

HSP 1 Score: 509.6 bits (1311), Expect = 3.3e-141
Identity = 273/402 (67.91%), Postives = 315/402 (78.36%), Query Frame = 1 

Query: 1   MYALRSSFSIS--SRHNPPSLLR-IDPLLYCFFSSSS--------------------HSQ 60
           MYA+  SFS+   S  NPP  LR I P L+ FFSSSS                    HSQ
Sbjct: 1   MYAMYPSFSVCVPSPLNPPFFLRLIHPFLFSFFSSSSSSSSSSSSSSSSSSSSSSSSHSQ 60

Query: 61  A-SASYGIVVQYLIDTFELSPARAVSIMSSRRGIASTEKPQSVYKYLSELGFSEAHIQST 120
             S SYGIV+QYLIDTF+LSPARAVSIM++RRGI STEKP+SVYKYLS+LG S+  I+S 
Sbjct: 61  PPSHSYGIVLQYLIDTFQLSPARAVSIMATRRGIQSTEKPRSVYKYLSDLGLSDTQIKSA 120

Query: 121 IRLAPQIAFSNIEKTLKPKIEFFQNLGLVGSDLGRFISKHSTLLTISLEKRLMPSVEILK 180
           +R+ PQIAFS+IEKTLKPKIEF QNLG VGSDL +FIS+ S   + SLEK LMP+VEILK
Sbjct: 121 VRITPQIAFSSIEKTLKPKIEFLQNLGFVGSDLSKFISRQSKFFSSSLEKTLMPNVEILK 180

Query: 181 SVFPKDECNSDLLQVLRRCSDMLMRSPYTRLPVNINYLQSCGIVGSQLSMLLKRQPALFG 240
           +V PK  CN DL +VLRRCSD+L RSPY  L VNINYL+SCGIV  QLS LLKRQPALF 
Sbjct: 181 NVLPKGTCNDDLPKVLRRCSDVLTRSPYKVLSVNINYLRSCGIVDYQLSTLLKRQPALFI 240

Query: 241 MRESQVRDLVSMVVETGFSTNTRMFVHGLHAISSVSNATFKKKVELICSFGITEKECMRM 300
           M ES+++D VSM V+ GFS N  MF+HGLH+ISS+SNAT+KKKV+LICSFGITEKECMRM
Sbjct: 241 MHESRLKDFVSMAVKAGFSPNGTMFIHGLHSISSISNATYKKKVKLICSFGITEKECMRM 300

Query: 301 FTSAPVLIRTSVGKLKRGLEFFMNEAEVSRSDIVRKPTCLMHAMQGRVLPRYRVLQVVNS 360
           F SAPVL+RTSVGKL+ GLEFFMNEA+VS+SDIVR P CLMHAM GRVLPRYRVL+V+ S
Sbjct: 301 FNSAPVLMRTSVGKLEVGLEFFMNEAKVSKSDIVRNPFCLMHAMHGRVLPRYRVLEVLKS 360

Query: 361 KRLSKKHLQLIDILGMSDENFLDKFVHRFPDQVTELLAAFRG 379
           KRL+KK  +LID L M DE+FLDKFV RFPD + +L  AFRG
Sbjct: 361 KRLTKKLPKLIDSLWMPDEDFLDKFVRRFPDNMNDLFEAFRG 402

[Close]
BLAST of CmaCh16G006680 vs. TrEMBL
Match: D7SW46_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_07s0031g01450 PE=4 SV=1)

HSP 1 Score: 357.1 bits (915), Expect = 2.8e-95
Identity = 188/365 (51.51%), Postives = 257/365 (70.41%), Query Frame = 1 

Query: 23  DPLLYCFFSSSSHSQASASYG---IVVQYLIDTFELSPARAVSIMSSRRGIASTEKPQSV 82
           +P L+   S SS   ++ S     I+V YLI TF  S   A SI +      STE PQSV
Sbjct: 4   NPALFNLLSLSSKRLSTLSSSPNPIIVNYLIQTFGFSQTLANSISNRFWWAKSTENPQSV 63

Query: 83  YKYLSELGFSEAHIQSTIRLAPQIAFSNIEKTLKPKIEFFQNLGLVGSDLGRFISKHSTL 142
             +L +LGFSEAHI++++R+ PQI FS+I+KTLKPK++FF+ LGLVG+DLG+FISK+S +
Sbjct: 64  IHFLRDLGFSEAHIRTSVRVGPQILFSDIDKTLKPKVQFFEQLGLVGADLGKFISKNSKV 123

Query: 143 LTISLEKRLMPSVEILKSVFPKDECNSDLLQVLRRCSDMLMRSPYTRLPVNINYLQSCGI 202
           LTISLEK+L+P +EILK     DE N DL++VLRRC+ +L R+P   L  NI +L+SCGI
Sbjct: 124 LTISLEKKLVPCIEILKKTLSDDENNGDLIRVLRRCTWVLSRNPELLLS-NIAFLESCGI 183

Query: 203 VGSQLSMLLKRQPALFGMRESQVRDLVSMVVETGFSTNTRMFVHGLHAISSVSNATFKKK 262
           VGSQLSMLL RQP LF +++S ++DLVS  V+ GFS  +RM V+ L+ IS + + T +KK
Sbjct: 184 VGSQLSMLLTRQPRLFVIKQSTLKDLVSRAVDMGFSIESRMLVYALYTISCLRDETLRKK 243

Query: 263 VELICSFGITEKECMRMFTSAPVLIRTSVGKLKRGLEFFMNEAEVSRSDIVRKPTCLMHA 322
            EL  S+G TE+EC+ MF   P L+R S  KLK G+EFFMN  +  ++ +V +PT LM +
Sbjct: 244 FELFRSWGFTEQECIEMFRRTPGLLRASEEKLKLGMEFFMNTMKFEKTLLVHRPTILMLS 303

Query: 323 MQGRVLPRYRVLQVVNSKRLSKKHLQLIDILGMSDENFLDKFVHRFPDQVTELLAAFRGQ 382
           M+ RV+PRYRVLQ++ SKRL K+    I++L ++DE FLDKF+ RF D   ELL A++G 
Sbjct: 304 MEDRVIPRYRVLQILKSKRLLKREPSFINVLSLTDEEFLDKFISRFADDAEELLVAYKGH 363

Query: 383 CMDEL 385
            + E+
Sbjct: 364 TLQEV 367

[Close]
BLAST of CmaCh16G006680 vs. TrEMBL
Match: B9T3X3_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0169990 PE=4 SV=1)

HSP 1 Score: 344.4 bits (882), Expect = 1.9e-91
Identity = 172/335 (51.34%), Postives = 241/335 (71.94%), Query Frame = 1 

Query: 48  YLIDTFELSPARAVSIMSSRRGIASTEKPQSVYKYLSELGFSEAHIQSTIRLAPQIAFSN 107
           YL+ + + S  +A +I +    I STEKPQSV+ +L  LG S +HIQS I  APQI F+N
Sbjct: 25  YLLKSLKFSETQAFTISNRFSHIKSTEKPQSVHYFLKNLGLSNSHIQSAIHGAPQILFAN 84

Query: 108 IEKTLKPKIEFFQNLGLVGSDLGRFISKHSTLLTISLEKRLMPSVEILKSVFPKDECNSD 167
           ++K LKPK++ FQ+LGLVG DLG+FISK+STLLT SL+K+L P VEILK +   DE N D
Sbjct: 85  VDKCLKPKVKLFQDLGLVGYDLGKFISKNSTLLTASLDKKLSPRVEILKRLLLNDENNKD 144

Query: 168 LLQVLRRCSDMLMRSPYTRLPVNINYLQSCGIVGSQLSMLLKRQPALFGMRESQVRDLVS 227
           L++VL RC+ ++ ++P +RL  N+ +L+SCGIVGSQLSMLL+RQP LF M+ES +RDLVS
Sbjct: 145 LVKVLTRCNWIISKNPKSRLLSNVAFLESCGIVGSQLSMLLRRQPRLFIMQESALRDLVS 204

Query: 228 MVVETGFSTNTRMFVHGLHAISSVSNATFKKKVELICSFGITEKECMRMFTSAPVLIRTS 287
            V+  GFS N+RM V+ L+ +S +S+ TF KK+E++  FG +E EC  MF   P L+R+S
Sbjct: 205 QVLNMGFSVNSRMLVYALYTVSCMSHETFGKKIEILKKFGFSEYECTEMFRKQPGLLRSS 264

Query: 288 VGKLKRGLEFFMNEAEVSRSDIVRKPTCLMHAMQGRVLPRYRVLQVVNSKRLSKKHLQLI 347
             KLK GL+FF+N  +  R  +V +PTCLM +M+ RV+PRY+VL+++  K+L KK    I
Sbjct: 265 EKKLKLGLDFFINTIKFKREVLVYRPTCLMLSMEERVIPRYKVLEIMKLKKLLKKQPSFI 324

Query: 348 DILGMSDENFLDKFVHRFPDQVTELLAAFRGQCMD 383
           ++L +++E F+ KF+  FPD   ELL A+R   +D
Sbjct: 325 NVLNLTEEEFVQKFIASFPDDAEELLVAYRSHTLD 359

[Close]
BLAST of CmaCh16G006680 vs. TrEMBL
Match: M5W835_PRUPE (Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa015928mg PE=4 SV=1)

HSP 1 Score: 327.0 bits (837), Expect = 3.1e-86
Identity = 165/323 (51.08%), Postives = 229/323 (70.90%), Query Frame = 1 

Query: 45  VVQYLIDTFELSPARAVSIMSSRRGIASTEKPQSVYKYLSELGFSEAHIQSTIRLAPQIA 104
           +  YLI TF+ +  +A SI +    + S EKPQSV  +L ELGFS+ HI+S +R +PQI 
Sbjct: 49  ITDYLISTFKFTKTQASSISNRFSWVTSPEKPQSVRSFLRELGFSDTHIRSAVRGSPQIL 108

Query: 105 FSNIEKTLKPKIEFFQNLGLVGSDLGRFISKHSTLLTISLEKRLMPSVEILKSVFPKDEC 164
           FSNI+KTL+PK+EFFQ LGL  SDL   ISK+STLLT+SLE++L+P +EILK +   DE 
Sbjct: 109 FSNIDKTLRPKLEFFQQLGLSSSDLASLISKNSTLLTVSLERKLVPCIEILKKILGNDEN 168

Query: 165 NSDLLQVLRRCSDMLMRSPYTRLPVNINYLQSCGIVGSQLSMLLKRQPALFGMRESQVRD 224
             DL++VL RC+ ++ + P +RL  NI +++SCGIVGSQL+MLLKRQP LF ++ES +R 
Sbjct: 169 AKDLIRVLCRCNWVVRKDPESRLLGNIAFMESCGIVGSQLTMLLKRQPWLFIVQESVLRS 228

Query: 225 LVSMVVETGFSTNTRMFVHGLHAISSVSNATFKKKVELICSFGITEKECMRMFTSAPVLI 284
           LVS V+E GFS N+RM VH L+ +S + + T  +K++L+C FG +E ECM MF   P L+
Sbjct: 229 LVSRVLEMGFSLNSRMLVHALYTVSCLRSGTISRKLDLLCIFGFSEDECMEMFRRTPGLL 288

Query: 285 RTSVGKLKRGLEFFMNEAEVSRSDIVRKPTCLMHAMQGRVLPRYRVLQVVNSKRLSKKHL 344
           RTS  KLK G++FF+N  +  +S ++  P  LM +M+ RV+ RYRVL+V+ SKRL K+  
Sbjct: 289 RTSEEKLKLGIDFFLNTVKFKKSVLIHTPWILMFSMENRVIARYRVLEVIKSKRLLKRDP 348

Query: 345 QLIDILGMSDENFLDKFVHRFPD 368
                L +++E FLDKF+ RF D
Sbjct: 349 TFYGALVLTEEEFLDKFISRFRD 371

[Close]
BLAST of CmaCh16G006680 vs. TrEMBL
Match: A0A061DJV1_THECC (Mitochondrial transcription termination factor family protein, putative OS=Theobroma cacao GN=TCM_001221 PE=4 SV=1)

HSP 1 Score: 318.5 bits (815), Expect = 1.1e-83
Identity = 176/383 (45.95%), Postives = 251/383 (65.54%), Query Frame = 1 

Query: 1   MYALRSSFSISSRH------NPPSLLRIDPLLYCFFSSSSHSQASASYGIVVQYLIDTFE 60
           M  L+SS   S+ H       P S +    LLYC    SS S  S S   ++ YL+   +
Sbjct: 1   MQILKSSSIFSTSHFLNFPLKPRSFIL---LLYC----SSSSSTSVSNSPLLNYLVKNLD 60

Query: 61  LSPARAVSIMSSRRGIASTEKPQSVYKYLSELGFSEAHIQSTIRLAPQIAFSNIEKTLKP 120
            +  +A+SI +    + S EKPQ+V  +   +GFS A I +++R APQI F+N+E  L+P
Sbjct: 61  FTETQALSIANRYPNVKSFEKPQAVANFFRNVGFSNAEIAASVRNAPQILFANVETKLRP 120

Query: 121 KIEFFQNLGLVGSDLGRFISKHSTLLTISLEKRLMPSVEILKSVFPKDECNSDLLQVLRR 180
           KI+FFQ+LG VG  LG+F+S +S LL  SL+K+L+PS +I+K V   ++ N DL++V  R
Sbjct: 121 KIKFFQDLGFVGPHLGKFLSGNSALLACSLDKKLIPSFQIVKKVLGNND-NKDLIKVFNR 180

Query: 181 CSDMLMRSPYTRLPVNINYLQSCGIVGSQLSMLLKRQPALFGMRESQVRDLVSMVVETGF 240
            S  + R    +L  NI YL+SCGIVGSQLS LLKRQP +F MRES +RDLVS V++ GF
Sbjct: 181 SSGFIARDCILKLSRNIGYLESCGIVGSQLSKLLKRQPRIFRMRESALRDLVSRVLDMGF 240

Query: 241 STNTRMFVHGLHAISSVSNATFKKKVELICSFGITEKECMRMFTSAPVLIRTSVGKLKRG 300
           ST++RM V+ +H ++ +S  TFKKK EL+ SFG +E E + MF  AP L+RTS  K+K G
Sbjct: 241 STDSRMLVYAIHTMNCLSEQTFKKKWELLQSFGFSENERVDMFRKAPGLLRTSEEKMKLG 300

Query: 301 LEFFMNEAEVSRSDIVRKPTCLMHAMQGRVLPRYRVLQVVNSKRLSKKHLQLIDILGMSD 360
           + FF N A+  ++ +V +P  LM++++ RV+PRYRVLQ++ SK+L KK L  ++IL  ++
Sbjct: 301 IAFFTNVAKFDKNVLVSRPRLLMNSLEDRVIPRYRVLQIIKSKKLLKKELSFLNILDYTE 360

Query: 361 ENFLDKFVHRFPDQVTELLAAFR 378
             FL KF+ RF D V ELL A++
Sbjct: 361 NEFL-KFISRFTDNVEELLIAYK 374

[Close]
BLAST of CmaCh16G006680 vs. TAIR10
Match: AT5G64950.1 (AT5G64950.1 Mitochondrial transcription termination factor family protein)

HSP 1 Score: 253.1 bits (645), Expect = 2.8e-67
Identity = 146/368 (39.67%), Postives = 230/368 (62.50%), Query Frame = 1 

Query: 21  RIDPLLYCFFSSSSHSQASASYGIVVQYLIDTFELSPARAVSIMSSRRGIASTEKPQSVY 80
           R D  L     SS+ + AS S    V++L D     P  A++I      + S E+P+SV 
Sbjct: 17  RWDRALSLHHFSSNATPASISNPAFVEFLRDNGFQKPL-AIAIAMRYPNLKSLEQPRSVI 76

Query: 81  KYLSELGFSEAHIQSTIRLAPQIAFSNIEKTLKPKIEFFQNLGLVGSDLGRFISKHSTLL 140
           + L    FS+  IQ +IR+ P++ F N+EK L+PK+ FF+++G  GS LG+F+S++S+++
Sbjct: 77  QMLKSYSFSDTQIQKSIRVHPRMMFYNVEKILEPKLRFFKDIGFTGSGLGKFVSQNSSVV 136

Query: 141 TISLEKRLMPSVEILKSVF-PKDECNSDLLQVLRRCSDMLM-RSPYTRLPVNINYLQSCG 200
            +SL K+L+P+VEILKS+  PK E   DL  +L RC  +L+ R P   L  NI+YL++CG
Sbjct: 137 GVSLVKKLIPTVEILKSIVAPKHE---DLPVILSRCGWLLLSRDPNLFLLPNISYLETCG 196

Query: 201 IVGSQLSMLLKRQPALFGMRESQVRDLVSMVVETGFSTNTRMFVHGLHAISSVSNATFKK 260
           IVGSQL+ LL+RQP +F + E ++R  VS  ++ GF+ N+RM VH + ++SS+S  TF +
Sbjct: 197 IVGSQLASLLRRQPRIFNLSEEKLRGYVSRALDLGFTLNSRMLVHAVISLSSLSEKTFDR 256

Query: 261 KVELICSFGITEKECMRMFTSAPVLIRTSVGKLKRGLEFFMNEAEVSRSDIVRKPTCLMH 320
           KV+L  + G +E E   +   +P LIR S  KL  G EF++    + R  + ++P  L +
Sbjct: 257 KVKLFMANGFSEDEITDIIRRSPGLIRCSEDKLTLGFEFYLKRMGLEREALAKRPCVLSY 316

Query: 321 AMQGRVLPRYRVLQVVNSKRL----SKKHLQLIDILGMSDENFLDKFVHRFPDQVT-ELL 380
            ++ RV+PR +VLQ++  K L     KK   ++ I+ M++E FL+K+V RF D++  ELL
Sbjct: 317 NLEKRVIPRLKVLQILREKGLLLKEEKKKKNMVGIVEMTEEAFLEKYVVRFGDEIAEELL 376

Query: 381 AAFRGQCM 382
            A++  C+
Sbjct: 377 VAYKCVCL 380

[Close]
BLAST of CmaCh16G006680 vs. TAIR10
Match: AT5G07900.1 (AT5G07900.1 Mitochondrial transcription termination factor family protein)

HSP 1 Score: 157.1 bits (396), Expect = 2.1e-38
Identity = 100/334 (29.94%), Postives = 172/334 (51.50%), Query Frame = 1 

Query: 46  VQYLIDTFELSPARAVSIMSSRRGIASTEKPQSVYKYLSELGFSEAHIQSTIRLAPQIAF 105
           + YLID+  LSP  A ++ S +  + S E+P +V   L + GF+ A I S ++  P +  
Sbjct: 72  LNYLIDSCGLSPDSA-TVASRKLLLDSPERPNTVLNLLRDHGFTTAQISSLVKKRPVLLL 131

Query: 106 SNIEKTLKPKIEFFQNLGLVGSDLGRFISKHSTLLTISLEKRLMPSVEILKSVFPKDECN 165
           +N E  L PK+ FF ++G+  S L R ++   T+LT SL  +L+PS   LKSV   DE  
Sbjct: 132 ANAESVLLPKLSFFLSIGVSKSLLARTLASDPTILTRSLVNQLIPSYNFLKSVLDSDE-- 191

Query: 166 SDLLQVLRRCSDMLMRSPYTRLPVNINYLQSCGIVGSQLSMLLKRQPALFGMRESQVRDL 225
             ++  LRR + + +      L  NINY+   G+    + +LL   P     +  + + +
Sbjct: 192 -KIVAALRRTTWVFLEDHTKNLVPNINYMAETGVPEKCIKLLLTHFPEAVMQKNHEFQAI 251

Query: 226 VSMVVETGFSTNTRMFVHGLHAISSVSN-ATFKKKVELICSFGITEKECMRMFTSAPVLI 285
                E GF+     FV  +HA+S   N + + K  E+   +G +E + M  F   P  +
Sbjct: 252 AKQAQEMGFNPQKSTFVLAIHALSGKGNKSIWDKCFEVYQRWGWSEDDIMCAFKKHPHCM 311

Query: 286 RTSVGKLKRGLEFFMNEAEVSRSDIVRKPTCLMHAMQGRVLPRYRVLQVVNSKRLSKKHL 345
             S  K+ R +E+F+NE  ++   I + P  L  +++ R++PR  V +V+ S  L K+  
Sbjct: 312 MLSERKINRTMEYFVNEMNMAPRSIAQCPVVLFFSLEKRIIPRCSVTKVLVSNGLVKEDW 371

Query: 346 QLIDILGMSDENFLDKFVHRFPDQVTELLAAFRG 379
            L  +L   ++ FL+K V ++ +++ EL+  + G
Sbjct: 372 SLTSLLVPVEKVFLEKLVIKYEEELPELMNLYLG 401

[Close]
BLAST of CmaCh16G006680 vs. TAIR10
Match: AT1G21150.1 (AT1G21150.1 Mitochondrial transcription termination factor family protein)

HSP 1 Score: 144.1 bits (362), Expect = 1.9e-34
Identity = 95/347 (27.38%), Postives = 168/347 (48.41%), Query Frame = 1 

Query: 31  SSSSHSQASASYGIVVQYLIDTFELSPARAVSIMSSRRGIASTEKPQSVYKYLSELGFSE 90
           S +   Q        V YL+D+  LS   A S  S    + S++KP SV     + GF+ 
Sbjct: 44  SENLEKQKPCLESFTVSYLVDSCGLSLESAKS-NSRFVKLVSSKKPDSVLALFKDHGFTN 103

Query: 91  AHIQSTIRLAPQIAFSNIEKTLKPKIEFFQNLGLVGSDLGRFISKHSTLLTISLEKRLMP 150
             I S I+  P++   + E  + PK+ FF ++G   SD  + IS    +L+ SL KRL+P
Sbjct: 104 DQITSVIKSFPRVLSLSPEDVISPKLMFFSSIGFSTSDTAKMISSSPKMLSYSLHKRLIP 163

Query: 151 SVEILKSVFPKDECNSDLLQVLRRCSDMLMRSPYTRLPVNINYLQSCGIVGSQLSMLLKR 210
             + LKS+  ++E     L+   RC  + +    +   + ++  +  G+    +  L++ 
Sbjct: 164 CYDSLKSILVEEESVVKCLKRGIRCFSLKITHCVS---LRVSICRELGVPDKSIKWLVQA 223

Query: 211 QPALFGMRESQVRDLVSMVVETGFSTNTRMFVHGLHAISSVSNATFKKKVELICSFGITE 270
            P  F  RE +  ++++ V   GF      FVH + A    S +  ++K +L   FG ++
Sbjct: 224 SPFTFFSRERRFNEVLNRVCSYGFDPKKAGFVHAMVAFDCTSESAMERKFKLFQCFGWSK 283

Query: 271 KECMRMFTSAPVLIRTSVGKLKRGLEFFMNEAEVSRSDIVRKPTCLMHAMQGRVLPRYRV 330
           ++ +      P  +  S  K+   LE+ +N   +   DIV +P  L  +M+ R+ PR +V
Sbjct: 284 EDFVAAIMRFPNCVTVSDEKIMYTLEYLVNNIGLQARDIVARPVVLSLSMEKRIKPRNQV 343

Query: 331 LQVVNSKRLSKKH-LQLIDILGMSDENFLDKFVHRFPDQVTELLAAF 377
           + ++ SK L KK  +    IL +    F+DKFV ++ D++ +L+  F
Sbjct: 344 ISLLLSKGLVKKEDINYFTILKLKSSEFMDKFVLKYQDEMPQLVQPF 386

[Close]
BLAST of CmaCh16G006680 vs. TAIR10
Match: AT1G61970.1 (AT1G61970.1 Mitochondrial transcription termination factor family protein)

HSP 1 Score: 86.3 bits (212), Expect = 4.6e-17
Identity = 72/277 (25.99%), Postives = 124/277 (44.77%), Query Frame = 1 

Query: 29  FFSSSSHSQASASYG-----IVVQYLIDTFELSPARAVSIMSSRRGIASTEKPQSVYKYL 88
           FFSS+S +  S   G       V YL+D+  L+   A SI S +        P SV   L
Sbjct: 33  FFSSASAACLSPRVGRKGNNFTVSYLVDSLGLTTKLAESI-SRKVSFEDKNNPDSVLNLL 92

Query: 89  SELGFSEAHIQSTIRLAPQIAFSNIEKTLKPKIEFFQNLGLVGSDLGRFISKHSTLLTIS 148
           +  GF+ + I + IR  PQ+  ++ EK+L PK++F Q+ G   S++   +S    +L   
Sbjct: 93  TSHGFTGSQISTIIRDYPQLLIADAEKSLGPKLQFLQSRGASSSEITEIVSSVPEILGKK 152

Query: 149 LEKRLMPSVEILKSVFPKDECNSDLLQVLRRCSDMLMRSPYTRLPVNINYLQSCGIVGSQ 208
             K +    + +K    +    ++ L     C  +   +   ++  N++ L+  G+    
Sbjct: 153 GHKTISVYYDFIKDTLLEKSSKNEKL-----CHSLPQGNLENKIR-NVSVLRELGMPHKL 212

Query: 209 L-SMLLKRQPALFGMRESQVRDLVSMVVETGFSTNTRMFVHGLHAISSVSNATFKKKVEL 268
           L S+L+     + G  + +  + +  VVE GF   T  FV  L  I  ++  T ++KV L
Sbjct: 213 LFSLLISDSQPVCG--KEKFEETLKKVVEMGFDPTTSKFVEALQVIYKMNEKTIEEKVHL 272

Query: 269 ICSFGITEKECMRMFTSAPVLIRTSVGKLKRGLEFFM 300
             S G    +    F   P+ +R S  K+   +E F+
Sbjct: 273 YKSLGFDVGDVWSSFKKWPISLRVSEKKMLDSIETFL 300

[Close]
BLAST of CmaCh16G006680 vs. TAIR10
Match: AT1G61980.1 (AT1G61980.1 Mitochondrial transcription termination factor family protein)

HSP 1 Score: 79.3 bits (194), Expect = 5.6e-15
Identity = 92/392 (23.47%), Postives = 164/392 (41.84%), Query Frame = 1 

Query: 30  FSSSSHSQASASYG-----IVVQYLIDTFELSPARAVSIMSSRRGIASTEKPQSVYKYLS 89
           FSS+S ++ S   G       V YL+D+  L P +    +S +      + P SV   L 
Sbjct: 34  FSSASAARLSPRVGRKGKSFTVSYLVDSLGL-PKKLAESVSRKVSFEDKDNPDSVLNLLR 93

Query: 90  ELGFSEAHIQSTIRLAPQIAFSNIEKTLKPKIEFFQNLGLVGSDLGRFISKHSTLLTISL 149
             GF+++ I + +   PQ+  ++ EK+L PK++F Q+ G   S+L   +S    +L    
Sbjct: 94  SHGFTDSQISTIVTDYPQLLVADAEKSLAPKLQFLQSRGASSSELTEIVSTVPKILGKRG 153

Query: 150 EKRLMPSVEILKSVFPKDECNSDLLQVLRRCSDMLMRSPYTRLPVNINYLQSCGIVGSQL 209
            K +    + +K         S+     + C      +   ++  N++ L+  G+    L
Sbjct: 154 HKTISVFYDFIKETLLDKSSKSE-----KSCQPFPQGNLENKIR-NLSVLRELGMPHKLL 213

Query: 210 -SMLLKRQPALFGMRESQVRDLVSMVVETGFSTNTRMFVHGLHAISSVSNATFKKKVELI 269
             +L+     +FG  + +  + +  VVE GF  +T  FV  L  +  +S+   + KV   
Sbjct: 214 FPLLISCDVPVFG--KEKFEESLKKVVEMGFDPSTSKFVEALCVVQRLSDKNIEDKVNAY 273

Query: 270 CSFGITEKECMRMFTSAPVLIRTSVGKLKRGLEFFM----NEAEVS------------RS 329
              G   +    +F   P  +  S  K+   +E F+    +  E S             +
Sbjct: 274 KRLGFDVEYVWTVFKRWPNFLTHSEKKILNTIETFLGLGFSRDEFSVLIKRFPQGIGLSA 333

Query: 330 DIVRKPTCLM--------------HAMQGRVL-----PRYRVLQVVNSKRLSKKHLQLID 378
           ++V+K T  +               A+ G  L     PR  V+Q + SK L    L  I 
Sbjct: 334 EMVKKKTEFLVKKMNWPLKALVSNPAVLGYSLEKRTVPRGNVVQALISKGLIGSELPSIS 393

[Close]
BLAST of CmaCh16G006680 vs. NCBI nr
Match: gi|700198082|gb|KGN53240.1| (hypothetical protein Csa_4G036600 [Cucumis sativus])

HSP 1 Score: 509.6 bits (1311), Expect = 4.8e-141
Identity = 273/402 (67.91%), Postives = 315/402 (78.36%), Query Frame = 1 

Query: 1   MYALRSSFSIS--SRHNPPSLLR-IDPLLYCFFSSSS--------------------HSQ 60
           MYA+  SFS+   S  NPP  LR I P L+ FFSSSS                    HSQ
Sbjct: 1   MYAMYPSFSVCVPSPLNPPFFLRLIHPFLFSFFSSSSSSSSSSSSSSSSSSSSSSSSHSQ 60

Query: 61  A-SASYGIVVQYLIDTFELSPARAVSIMSSRRGIASTEKPQSVYKYLSELGFSEAHIQST 120
             S SYGIV+QYLIDTF+LSPARAVSIM++RRGI STEKP+SVYKYLS+LG S+  I+S 
Sbjct: 61  PPSHSYGIVLQYLIDTFQLSPARAVSIMATRRGIQSTEKPRSVYKYLSDLGLSDTQIKSA 120

Query: 121 IRLAPQIAFSNIEKTLKPKIEFFQNLGLVGSDLGRFISKHSTLLTISLEKRLMPSVEILK 180
           +R+ PQIAFS+IEKTLKPKIEF QNLG VGSDL +FIS+ S   + SLEK LMP+VEILK
Sbjct: 121 VRITPQIAFSSIEKTLKPKIEFLQNLGFVGSDLSKFISRQSKFFSSSLEKTLMPNVEILK 180

Query: 181 SVFPKDECNSDLLQVLRRCSDMLMRSPYTRLPVNINYLQSCGIVGSQLSMLLKRQPALFG 240
           +V PK  CN DL +VLRRCSD+L RSPY  L VNINYL+SCGIV  QLS LLKRQPALF 
Sbjct: 181 NVLPKGTCNDDLPKVLRRCSDVLTRSPYKVLSVNINYLRSCGIVDYQLSTLLKRQPALFI 240

Query: 241 MRESQVRDLVSMVVETGFSTNTRMFVHGLHAISSVSNATFKKKVELICSFGITEKECMRM 300
           M ES+++D VSM V+ GFS N  MF+HGLH+ISS+SNAT+KKKV+LICSFGITEKECMRM
Sbjct: 241 MHESRLKDFVSMAVKAGFSPNGTMFIHGLHSISSISNATYKKKVKLICSFGITEKECMRM 300

Query: 301 FTSAPVLIRTSVGKLKRGLEFFMNEAEVSRSDIVRKPTCLMHAMQGRVLPRYRVLQVVNS 360
           F SAPVL+RTSVGKL+ GLEFFMNEA+VS+SDIVR P CLMHAM GRVLPRYRVL+V+ S
Sbjct: 301 FNSAPVLMRTSVGKLEVGLEFFMNEAKVSKSDIVRNPFCLMHAMHGRVLPRYRVLEVLKS 360

Query: 361 KRLSKKHLQLIDILGMSDENFLDKFVHRFPDQVTELLAAFRG 379
           KRL+KK  +LID L M DE+FLDKFV RFPD + +L  AFRG
Sbjct: 361 KRLTKKLPKLIDSLWMPDEDFLDKFVRRFPDNMNDLFEAFRG 402

[Close]
BLAST of CmaCh16G006680 vs. NCBI nr
Match: gi|659107586|ref|XP_008453750.1| (PREDICTED: uncharacterized protein LOC103494394 [Cucumis melo])

HSP 1 Score: 503.8 bits (1296), Expect = 2.6e-139
Identity = 262/400 (65.50%), Postives = 319/400 (79.75%), Query Frame = 1 

Query: 1   MYALRSSFSISSRHNPPSLLRIDPLLYCFFSSSSHSQASASY-------------GIVVQ 60
           MYA+   FS+SSR NPP  LRI P  + FFSSSS S +S+S              GIV+Q
Sbjct: 1   MYAMTPPFSVSSRLNPPPFLRIHPFFFSFFSSSSSSSSSSSSSSSSHTQPPSDSNGIVLQ 60

Query: 61  YLIDTFELSPARAVSIMSSRRGIASTEKPQSVYKYLSELGFSEAHIQSTIRLAPQIAFSN 120
           YLIDTF+LSPA AVSIM++RRG+ STEKP+SVYKYLSELG S+  I+S IR  PQ+AF++
Sbjct: 61  YLIDTFQLSPASAVSIMANRRGLKSTEKPRSVYKYLSELGLSDTQIKSAIRNTPQLAFTS 120

Query: 121 IEKTLKPKIEFFQNLGLVGSDLGRFISKHSTLLTISLEKRLMPSVEILKSVFPKDECNSD 180
           I+KTLKPKIEFFQNLGLVGS L +FISK+S +L+ SLEK LMP++EILK+V  KD+CN+ 
Sbjct: 121 IDKTLKPKIEFFQNLGLVGSHLSKFISKNSKVLSCSLEKTLMPNIEILKNVLAKDKCNAG 180

Query: 181 LLQVLRRCSDMLMRSPYTRLPVNINYLQSCGIVGSQLSMLLKRQPALFGMRESQVRDLVS 240
           L  VLRRCS +LMRSP   L VNI+YL+SCG+V  QL MLLKRQPAL   RES+++D VS
Sbjct: 181 LPTVLRRCSGILMRSPDKVLSVNISYLRSCGVVDYQLPMLLKRQPALLITRESRLKDFVS 240

Query: 241 MVVETGFSTNTRMFVHGLHAISSVSNATFKKKVELICSFGITEKECMRMFTSAPVLIRTS 300
           M ++ GFS N+RMF+HGL +ISS+SNATFKKKVELICSFGITEKECMRMF SAPVL+RTS
Sbjct: 241 MAIKAGFSINSRMFIHGLLSISSISNATFKKKVELICSFGITEKECMRMFNSAPVLMRTS 300

Query: 301 VGKLKRGLEFFMNEAEVSRSDIVRKPTCLMHAMQGRVLPRYRVLQVVNSKRLSKKHLQLI 360
           + KL+ GLEFFMNEA+VS+S+IVRKP+CLMHAM  RVLPRYRVL+V+ SKRL+KK  +LI
Sbjct: 301 IDKLEVGLEFFMNEAKVSKSEIVRKPSCLMHAMHERVLPRYRVLEVLKSKRLTKKLPKLI 360

Query: 361 DILGMSDENFLDKFVHRFPDQVTELLAAFRGQCMDELQPK 388
           + L  SDE+FLD +V RFPD + +L  AFRG  +  LQP+
Sbjct: 361 NSLWKSDEDFLDIYVRRFPDNMDDLFEAFRGNSVGALQPE 400

[Close]
BLAST of CmaCh16G006680 vs. NCBI nr
Match: gi|449462880|ref|XP_004149163.1| (PREDICTED: uncharacterized protein LOC101214031 [Cucumis sativus])

HSP 1 Score: 450.3 bits (1157), Expect = 3.4e-123
Identity = 227/315 (72.06%), Postives = 264/315 (83.81%), Query Frame = 1 

Query: 64  MSSRRGIASTEKPQSVYKYLSELGFSEAHIQSTIRLAPQIAFSNIEKTLKPKIEFFQNLG 123
           M++RRGI STEKP+SVYKYLS+LG S+  I+S +R+ PQIAFS+IEKTLKPKIEF QNLG
Sbjct: 1   MATRRGIQSTEKPRSVYKYLSDLGLSDTQIKSAVRITPQIAFSSIEKTLKPKIEFLQNLG 60

Query: 124 LVGSDLGRFISKHSTLLTISLEKRLMPSVEILKSVFPKDECNSDLLQVLRRCSDMLMRSP 183
            VGSDL +FIS+ S   + SLEK LMP+VEILK+V PK  CN DL +VLRRCSD+L RSP
Sbjct: 61  FVGSDLSKFISRQSKFFSSSLEKTLMPNVEILKNVLPKGTCNDDLPKVLRRCSDVLTRSP 120

Query: 184 YTRLPVNINYLQSCGIVGSQLSMLLKRQPALFGMRESQVRDLVSMVVETGFSTNTRMFVH 243
           Y  L VNINYL+SCGIV  QLS LLKRQPALF M ES+++D VSM V+ GFS N  MF+H
Sbjct: 121 YKVLSVNINYLRSCGIVDYQLSTLLKRQPALFIMHESRLKDFVSMAVKAGFSPNGTMFIH 180

Query: 244 GLHAISSVSNATFKKKVELICSFGITEKECMRMFTSAPVLIRTSVGKLKRGLEFFMNEAE 303
           GLH+ISS+SNAT+KKKV+LICSFGITEKECMRMF SAPVL+RTSVGKL+ GLEFFMNEA+
Sbjct: 181 GLHSISSISNATYKKKVKLICSFGITEKECMRMFNSAPVLMRTSVGKLEVGLEFFMNEAK 240

Query: 304 VSRSDIVRKPTCLMHAMQGRVLPRYRVLQVVNSKRLSKKHLQLIDILGMSDENFLDKFVH 363
           VS+SDIVR P CLMHAM GRVLPRYRVL+V+ SKRL+KK  +LID L M DE+FLDKFV 
Sbjct: 241 VSKSDIVRNPFCLMHAMHGRVLPRYRVLEVLKSKRLTKKLPKLIDSLWMPDEDFLDKFVR 300

Query: 364 RFPDQVTELLAAFRG 379
           RFPD + +L  AFRG
Sbjct: 301 RFPDNMNDLFEAFRG 315

[Close]
BLAST of CmaCh16G006680 vs. NCBI nr
Match: gi|296082490|emb|CBI21495.3| (unnamed protein product [Vitis vinifera])

HSP 1 Score: 357.1 bits (915), Expect = 4.0e-95
Identity = 188/365 (51.51%), Postives = 257/365 (70.41%), Query Frame = 1 

Query: 23  DPLLYCFFSSSSHSQASASYG---IVVQYLIDTFELSPARAVSIMSSRRGIASTEKPQSV 82
           +P L+   S SS   ++ S     I+V YLI TF  S   A SI +      STE PQSV
Sbjct: 4   NPALFNLLSLSSKRLSTLSSSPNPIIVNYLIQTFGFSQTLANSISNRFWWAKSTENPQSV 63

Query: 83  YKYLSELGFSEAHIQSTIRLAPQIAFSNIEKTLKPKIEFFQNLGLVGSDLGRFISKHSTL 142
             +L +LGFSEAHI++++R+ PQI FS+I+KTLKPK++FF+ LGLVG+DLG+FISK+S +
Sbjct: 64  IHFLRDLGFSEAHIRTSVRVGPQILFSDIDKTLKPKVQFFEQLGLVGADLGKFISKNSKV 123

Query: 143 LTISLEKRLMPSVEILKSVFPKDECNSDLLQVLRRCSDMLMRSPYTRLPVNINYLQSCGI 202
           LTISLEK+L+P +EILK     DE N DL++VLRRC+ +L R+P   L  NI +L+SCGI
Sbjct: 124 LTISLEKKLVPCIEILKKTLSDDENNGDLIRVLRRCTWVLSRNPELLLS-NIAFLESCGI 183

Query: 203 VGSQLSMLLKRQPALFGMRESQVRDLVSMVVETGFSTNTRMFVHGLHAISSVSNATFKKK 262
           VGSQLSMLL RQP LF +++S ++DLVS  V+ GFS  +RM V+ L+ IS + + T +KK
Sbjct: 184 VGSQLSMLLTRQPRLFVIKQSTLKDLVSRAVDMGFSIESRMLVYALYTISCLRDETLRKK 243

Query: 263 VELICSFGITEKECMRMFTSAPVLIRTSVGKLKRGLEFFMNEAEVSRSDIVRKPTCLMHA 322
            EL  S+G TE+EC+ MF   P L+R S  KLK G+EFFMN  +  ++ +V +PT LM +
Sbjct: 244 FELFRSWGFTEQECIEMFRRTPGLLRASEEKLKLGMEFFMNTMKFEKTLLVHRPTILMLS 303

Query: 323 MQGRVLPRYRVLQVVNSKRLSKKHLQLIDILGMSDENFLDKFVHRFPDQVTELLAAFRGQ 382
           M+ RV+PRYRVLQ++ SKRL K+    I++L ++DE FLDKF+ RF D   ELL A++G 
Sbjct: 304 MEDRVIPRYRVLQILKSKRLLKREPSFINVLSLTDEEFLDKFISRFADDAEELLVAYKGH 363

Query: 383 CMDEL 385
            + E+
Sbjct: 364 TLQEV 367

[Close]
BLAST of CmaCh16G006680 vs. NCBI nr
Match: gi|731397370|ref|XP_002276330.2| (PREDICTED: uncharacterized protein LOC100268158 [Vitis vinifera])

HSP 1 Score: 357.1 bits (915), Expect = 4.0e-95
Identity = 188/365 (51.51%), Postives = 257/365 (70.41%), Query Frame = 1 

Query: 23  DPLLYCFFSSSSHSQASASYG---IVVQYLIDTFELSPARAVSIMSSRRGIASTEKPQSV 82
           +P L+   S SS   ++ S     I+V YLI TF  S   A SI +      STE PQSV
Sbjct: 25  NPALFNLLSLSSKRLSTLSSSPNPIIVNYLIQTFGFSQTLANSISNRFWWAKSTENPQSV 84

Query: 83  YKYLSELGFSEAHIQSTIRLAPQIAFSNIEKTLKPKIEFFQNLGLVGSDLGRFISKHSTL 142
             +L +LGFSEAHI++++R+ PQI FS+I+KTLKPK++FF+ LGLVG+DLG+FISK+S +
Sbjct: 85  IHFLRDLGFSEAHIRTSVRVGPQILFSDIDKTLKPKVQFFEQLGLVGADLGKFISKNSKV 144

Query: 143 LTISLEKRLMPSVEILKSVFPKDECNSDLLQVLRRCSDMLMRSPYTRLPVNINYLQSCGI 202
           LTISLEK+L+P +EILK     DE N DL++VLRRC+ +L R+P   L  NI +L+SCGI
Sbjct: 145 LTISLEKKLVPCIEILKKTLSDDENNGDLIRVLRRCTWVLSRNPELLLS-NIAFLESCGI 204

Query: 203 VGSQLSMLLKRQPALFGMRESQVRDLVSMVVETGFSTNTRMFVHGLHAISSVSNATFKKK 262
           VGSQLSMLL RQP LF +++S ++DLVS  V+ GFS  +RM V+ L+ IS + + T +KK
Sbjct: 205 VGSQLSMLLTRQPRLFVIKQSTLKDLVSRAVDMGFSIESRMLVYALYTISCLRDETLRKK 264

Query: 263 VELICSFGITEKECMRMFTSAPVLIRTSVGKLKRGLEFFMNEAEVSRSDIVRKPTCLMHA 322
            EL  S+G TE+EC+ MF   P L+R S  KLK G+EFFMN  +  ++ +V +PT LM +
Sbjct: 265 FELFRSWGFTEQECIEMFRRTPGLLRASEEKLKLGMEFFMNTMKFEKTLLVHRPTILMLS 324

Query: 323 MQGRVLPRYRVLQVVNSKRLSKKHLQLIDILGMSDENFLDKFVHRFPDQVTELLAAFRGQ 382
           M+ RV+PRYRVLQ++ SKRL K+    I++L ++DE FLDKF+ RF D   ELL A++G 
Sbjct: 325 MEDRVIPRYRVLQILKSKRLLKREPSFINVLSLTDEEFLDKFISRFADDAEELLVAYKGH 384

Query: 383 CMDEL 385
            + E+
Sbjct: 385 TLQEV 388

The following BLAST results are available for this feature:
BLAST of CmaCh16G006680 vs. Swiss-Prot
Match NameE-valueIdentityDescription
MTEF2_ARATH1.4e-0724.76Transcription termination factor MTERF2, chloroplastic OS=Arabidopsis thaliana G... [more]
MTEF5_ARATH5.3e-0721.45Transcription termination factor MTERF5, chloroplastic OS=Arabidopsis thaliana G... [more]
BLAST of CmaCh16G006680 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KUB9_CUCSA3.3e-14167.91Uncharacterized protein OS=Cucumis sativus GN=Csa_4G036600 PE=4 SV=1[more]
D7SW46_VITVI2.8e-9551.51Putative uncharacterized protein OS=Vitis vinifera GN=VIT_07s0031g01450 PE=4 SV=... [more]
B9T3X3_RICCO1.9e-9151.34Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0169990 PE=4 SV=1[more]
M5W835_PRUPE3.1e-8651.08Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa015928mg PE=4 S... [more]
A0A061DJV1_THECC1.1e-8345.95Mitochondrial transcription termination factor family protein, putative OS=Theob... [more]
BLAST of CmaCh16G006680 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G64950.12.8e-6739.67 Mitochondrial transcription termination factor family protein[more]
AT5G07900.12.1e-3829.94 Mitochondrial transcription termination factor family protein[more]
AT1G21150.11.9e-3427.38 Mitochondrial transcription termination factor family protein[more]
AT1G61970.14.6e-1725.99 Mitochondrial transcription termination factor family protein[more]
AT1G61980.15.6e-1523.47 Mitochondrial transcription termination factor family protein[more]
BLAST of CmaCh16G006680 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700198082|gb|KGN53240.1|4.8e-14167.91hypothetical protein Csa_4G036600 [Cucumis sativus][more]
gi|659107586|ref|XP_008453750.1|2.6e-13965.50PREDICTED: uncharacterized protein LOC103494394 [Cucumis melo][more]
gi|449462880|ref|XP_004149163.1|3.4e-12372.06PREDICTED: uncharacterized protein LOC101214031 [Cucumis sativus][more]
gi|296082490|emb|CBI21495.3|4.0e-9551.51unnamed protein product [Vitis vinifera][more]
gi|731397370|ref|XP_002276330.2|4.0e-9551.51PREDICTED: uncharacterized protein LOC100268158 [Vitis vinifera][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR003690MTERF
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Vocabulary: Molecular Function
TermDefinition
GO:0003690double-stranded DNA binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006355 regulation of transcription, DNA-templated
cellular_component GO:0005575 cellular_component
molecular_function GO:0003690 double-stranded DNA binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh16G006680.1CmaCh16G006680.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003690Transcription termination factor, mitochondrial/chloroplasticPFAMPF02536mTERFcoord: 250..358
score: 4.6E-15coord: 167..262
score: 2.4E-7coord: 81..237
score: 1.4
IPR003690Transcription termination factor, mitochondrial/chloroplasticSMARTSM00733mt_12coord: 306..337
score: 490.0coord: 205..235
score: 2.2coord: 130..162
score: 4.1coord: 274..305
score: 9.4coord: 94..125
score: 0.12coord: 239..269
score: 750.0coord: 169..200
score: 1
NoneNo IPR availablePANTHERPTHR13068CGI-12 PROTEIN-RELATEDcoord: 7..383
score: 9.0E

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CmaCh16G006680Cucurbita pepo (Zucchini)cmacpeB344
CmaCh16G006680Cucurbita pepo (Zucchini)cmacpeB350
CmaCh16G006680Bottle gourd (USVL1VR-Ls)cmalsiB326
CmaCh16G006680Cucumber (Gy14) v2cgybcmaB498
CmaCh16G006680Melon (DHL92) v3.6.1cmamedB350
CmaCh16G006680Silver-seed gourdcarcmaB1286
CmaCh16G006680Silver-seed gourdcarcmaB1409
CmaCh16G006680Cucumber (Chinese Long) v3cmacucB0393
CmaCh16G006680Cucumber (Chinese Long) v3cmacucB0409
CmaCh16G006680Watermelon (97103) v2cmawmbB351
CmaCh16G006680Watermelon (97103) v2cmawmbB331
CmaCh16G006680Wax gourdcmawgoB0432
CmaCh16G006680Cucurbita maxima (Rimu)cmacmaB350
CmaCh16G006680Cucumber (Gy14) v1cgycmaB0595
CmaCh16G006680Cucurbita moschata (Rifu)cmacmoB322
CmaCh16G006680Cucurbita moschata (Rifu)cmacmoB337
CmaCh16G006680Wild cucumber (PI 183967)cmacpiB342
CmaCh16G006680Cucumber (Chinese Long) v2cmacuB337
CmaCh16G006680Melon (DHL92) v3.5.1cmameB301
CmaCh16G006680Watermelon (Charleston Gray)cmawcgB301
CmaCh16G006680Watermelon (97103) v1cmawmB307
CmaCh16G006680Watermelon (97103) v1cmawmB323