CmaCh16G005480 (gene) Cucurbita maxima (Rimu)
The following sequences are available for this feature:
Legend: exonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGCTTCAAGAGAAACCAAATGATCGTAATGAACTTAGTACCTGGAAGGAGCTGATTGTAGCCACTATGTCCACCACTGAGTCTGGCCAAAATGCCAAGAATTGGAGCATTGTTATAAGTAGCAGGCTCAGTCTGCTCATAATTGTCCCTTTCATCAGCAAAGTTGTCGTAGGCATCAGGCCCACCCACAAGAGCACCGGTGAGAAGGTTGGGGTCGCTTGCCTTTCTGCCATACCATGTGGCATAGCCACCCCTGCAGCTGACAAAGGCAGAATTGACCTTGATGGAAACAATGGAAGATCCCCTGTGGTGGACTTGTCGTGGGTAATTGTTTCCATACCCCACCATGTAACTCGTAGCCCTCGGATTGTCCCCAAGGATGTAATCCACCTGTTTCAATTAGAATTTTAAATTAAACAGACATTCCATCTGATTTAATAATGATAACCCTTTTCTCATTTGATGAATAATAGGTACCTGAGATTGTGCAAAGCGAAGAAGCTCGGAAGGCTGGACACTACCGGCGGCGCACCTCAAGTTAGCGCCGGCAGAAGAAAGATAGTCGGAGTAGACGGTGGCGAGGAAGGCAGCACTAGTAACAAACTGCATATTGTTCCATCTCTGTCGGAAAATAAGACCGGCGGGCGTGGTCTGAACATTGCGAGTACCTTTCTTCATGCAAGAGCACAAGAAATTTTCAGCCTTGTCCTTGTACCTCTGGAACACCGGCCCGTGGTGAGCTGCTTTTCCTTGCAACAAAAACTGCCATCACAAACACCCAAATCACTCTTATAATTTTGTGTTTTGTTGACAATCATTGAGAGGTCACAATTAAGGGAATTATGGGTTTATTAGTAAATACTATCTTTAGGTCTTTGGAAAAGCCCAAAGTAAACTCCACACATCATTGTAGAGCGGAGTAATTCTTAACATGGTATCAAAGTCATGTCCTTAACTTGTGAGTCTCGAAAGTATAATCAAAAGTGACTCAAGAAGTGTCAAACAAATTGTGTACTTTGTTTGAGGGCTCTAGAGAATGAGTTGAGCTTTGATTAAGGAGAGGATCAAAGGCTCCATAGGCCTCGGAAGAAGCTCTATAGTGTACTTTGTTCGAGGAAGATTGTTGAGAATTGTTGGGAGAGGAGTCACACGTCGGCTAATTAAGGAAACCATGGGTTCATTAGGAATACTATCTTCATTTGTATGAAACTTTTCGGTAAAACCAAAATGAAAGTCACGAAAGTTCATGCTGAAAAGGGACAATATCATATGATTCCTAACACTATTCCGGCCATCTTTAGATAATCTTTAAAGAGAAAGAACAAACCTTGGCAACAAGGGTTTGGACACCAGCATATTTGACATCCCAGCCAAATTCAGTCATGCTCCAACCAGTTCCTCCCATGGAGTCCCCATTTTCTCCGAGGTAATTCAAGTAATATTGGTTGTTTGTTGCCTCATACAGCCATGCAGCTGCCCACAGTAA ATGCTTCAAGAGAAACCAAATGATCGTAATGAACTTAGTACCTGGAAGGAGCTGATTGTAGCCACTATGTCCACCACTGAGTCTGGCCAAAATGCCAAGAATTGGAGCATTGTTATAAGTAGCAGGCTCAGTCTGCTCATAATTGTCCCTTTCATCAGCAAAGTTGTCGTAGGCATCAGGCCCACCCACAAGAGCACCGGTGAGAAGGTTGGGGTCGCTTGCCTTTCTGCCATACCATGTGGCATAGCCACCCCTGCAGCTGACAAAGGCAGAATTGACCTTGATGGAAACAATGGAAGATCCCCTGTGGTGGACTTGTCGTGGGTAATTGTTTCCATACCCCACCATGTAACTCGTAGCCCTCGGATTGTCCCCAAGGATGTAATCCACCTGTACCTGAGATTGTGCAAAGCGAAGAAGCTCGGAAGGCTGGACACTACCGGCGGCGCACCTCAAGTTAGCGCCGGCAGAAGAAAGATAGTCGGAGTAGACGGTGGCGAGGAAGGCAGCACTAGTAACAAACTGCATATTGTTCCATCTCTGTCGGAAAATAAGACCGGCGGGCGTGGTCTGAACATTGCGAGTACCTTTCTTCATGCAAGAGCACAAGAAATTTTCAGCCTTGTCCTTGTACCTCTGGAACACCGGCCCGTGCCATGCAGCTGCCCACAGTAA ATGCTTCAAGAGAAACCAAATGATCGTAATGAACTTAGTACCTGGAAGGAGCTGATTGTAGCCACTATGTCCACCACTGAGTCTGGCCAAAATGCCAAGAATTGGAGCATTGTTATAAGTAGCAGGCTCAGTCTGCTCATAATTGTCCCTTTCATCAGCAAAGTTGTCGTAGGCATCAGGCCCACCCACAAGAGCACCGGTGAGAAGGTTGGGGTCGCTTGCCTTTCTGCCATACCATGTGGCATAGCCACCCCTGCAGCTGACAAAGGCAGAATTGACCTTGATGGAAACAATGGAAGATCCCCTGTGGTGGACTTGTCGTGGGTAATTGTTTCCATACCCCACCATGTAACTCGTAGCCCTCGGATTGTCCCCAAGGATGTAATCCACCTGTACCTGAGATTGTGCAAAGCGAAGAAGCTCGGAAGGCTGGACACTACCGGCGGCGCACCTCAAGTTAGCGCCGGCAGAAGAAAGATAGTCGGAGTAGACGGTGGCGAGGAAGGCAGCACTAGTAACAAACTGCATATTGTTCCATCTCTGTCGGAAAATAAGACCGGCGGGCGTGGTCTGAACATTGCGAGTACCTTTCTTCATGCAAGAGCACAAGAAATTTTCAGCCTTGTCCTTGTACCTCTGGAACACCGGCCCGTGCCATGCAGCTGCCCACAGTAA MLQEKPNDRNELSTWKELIVATMSTTESGQNAKNWSIVISSRLSLLIIVPFISKVVVGIRPTHKSTGEKVGVACLSAIPCGIATPAADKGRIDLDGNNGRSPVVDLSWVIVSIPHHVTRSPRIVPKDVIHLYLRLCKAKKLGRLDTTGGAPQVSAGRRKIVGVDGGEEGSTSNKLHIVPSLSENKTGGRGLNIASTFLHARAQEIFSLVLVPLEHRPVPCSCPQ
BLAST of CmaCh16G005480 vs. TrEMBL
Match: A0A0N7KCK4_ORYSJ (Os01g0220150 protein OS=Oryza sativa subsp. japonica GN=Os01g0220150 PE=4 SV=1) HSP 1 Score: 106.7 bits (265), Expect = 3.8e-20 Identity = 70/194 (36.08%), Postives = 105/194 (54.12%), Query Frame = 1
BLAST of CmaCh16G005480 vs. TrEMBL
Match: A0A0P0V1P6_ORYSJ (Os01g0313050 protein (Fragment) OS=Oryza sativa subsp. japonica GN=Os01g0313050 PE=4 SV=1) HSP 1 Score: 67.8 bits (164), Expect = 1.9e-08 Identity = 50/189 (26.46%), Postives = 84/189 (44.44%), Query Frame = 1
BLAST of CmaCh16G005480 vs. NCBI nr
Match: gi|937895085|dbj|BAS71065.1| (Os01g0220150 [Oryza sativa Japonica Group]) HSP 1 Score: 106.7 bits (265), Expect = 5.4e-20 Identity = 70/194 (36.08%), Postives = 105/194 (54.12%), Query Frame = 1
BLAST of CmaCh16G005480 vs. NCBI nr
Match: gi|937895814|dbj|BAS71794.1| (Os01g0313050, partial [Oryza sativa Japonica Group]) HSP 1 Score: 67.8 bits (164), Expect = 2.8e-08 Identity = 50/189 (26.46%), Postives = 84/189 (44.44%), Query Frame = 1
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |