CmaCh16G005300 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh16G005300
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	Cellulose synthase-like protein
Location	Cma_Chr16 : 2711058 .. 2711768 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGCAATACATTGCACGCGCCGCCATACCCAACCCTCCGCCACTCCCACTAAACTCCCAACACCTCTCCGGCCGCACCACCCTCTTCAACCGCCTCTTCGCCGCCGTTTACGCCGGTGCCATTTTATCTCTGTTTTATTACCACTTAACTTCACTTCTCAAATCCCCCACCTCTGTTTCTTCATTTTTCGTCTCTATTTCTCTATTCATCTCCGACGTCGTTTTGGCGTTCTTGTGGGCCACCACTCAATGCAACCGTATGATTCCCCTCCGCCGCCGCGAGTTCCCTAATAACCTCAAGCAGTTACTCAAAAACGATTCGGATTTTCCGGCGTTGGATGTCTTTATTTGCACTGCGGATCCGTACAAGGAGCCACCAATCAACGTCATCAACACAGCATTGTCCGTCTTGGCCTATGACTACCCGACAACTAAGATCTCCGTCTATATCTCCGACGACGGCGGCTCAGCCGTGACTCTCTTTGCTTTCATGGAAGCGGCCAGATTCGCCGCCGAATGGTTGCCGTTTTGCAGGAAAAACCACGTCGTTGAAAGGAATCCCGAGGCGTTCTTTGAGTCCAACAAGGATTTGAACTCTGAATCGGAGAAGATCAAGGTACATAATCTATGTTTTTTTTTTTAATAAAAATAAATAAATAAATTATTCGTTTATTCAATTAGTTTAAATAGTAATTTTTAGAAAATTTAG

mRNA sequence

ATGGAGCAATACATTGCACGCGCCGCCATACCCAACCCTCCGCCACTCCCACTAAACTCCCAACACCTCTCCGGCCGCACCACCCTCTTCAACCGCCTCTTCGCCGCCGTTTACGCCGGTGCCATTTTATCTCTGTTTTATTACCACTTAACTTCACTTCTCAAATCCCCCACCTCTGTTTCTTCATTTTTCGTCTCTATTTCTCTATTCATCTCCGACGTCGTTTTGGCGTTCTTGTGGGCCACCACTCAATGCAACCGTATGATTCCCCTCCGCCGCCGCGAGTTCCCTAATAACCTCAAGCAGTTACTCAAAAACGATTCGGATTTTCCGGCGTTGGATGTCTTTATTTGCACTGCGGATCCGTACAAGGAGCCACCAATCAACGTCATCAACACAGCATTGTCCGTCTTGGCCTATGACTACCCGACAACTAAGATCTCCGTCTATATCTCCGACGACGGCGGCTCAGCCGTGACTCTCTTTGCTTTCATGGAAGCGGCCAGATTCGCCGCCGAATGGTTGCCGTTTTGCAGGAAAAACCACGTCGTTGAAAGGAATCCCGAGGCGTTCTTTGAGTCCAACAAGGATTTGAACTCTGAATCGGAGAAGATCAAGAAAATTTAG

Coding sequence (CDS)

ATGGAGCAATACATTGCACGCGCCGCCATACCCAACCCTCCGCCACTCCCACTAAACTCCCAACACCTCTCCGGCCGCACCACCCTCTTCAACCGCCTCTTCGCCGCCGTTTACGCCGGTGCCATTTTATCTCTGTTTTATTACCACTTAACTTCACTTCTCAAATCCCCCACCTCTGTTTCTTCATTTTTCGTCTCTATTTCTCTATTCATCTCCGACGTCGTTTTGGCGTTCTTGTGGGCCACCACTCAATGCAACCGTATGATTCCCCTCCGCCGCCGCGAGTTCCCTAATAACCTCAAGCAGTTACTCAAAAACGATTCGGATTTTCCGGCGTTGGATGTCTTTATTTGCACTGCGGATCCGTACAAGGAGCCACCAATCAACGTCATCAACACAGCATTGTCCGTCTTGGCCTATGACTACCCGACAACTAAGATCTCCGTCTATATCTCCGACGACGGCGGCTCAGCCGTGACTCTCTTTGCTTTCATGGAAGCGGCCAGATTCGCCGCCGAATGGTTGCCGTTTTGCAGGAAAAACCACGTCGTTGAAAGGAATCCCGAGGCGTTCTTTGAGTCCAACAAGGATTTGAACTCTGAATCGGAGAAGATCAAGAAAATTTAG

Protein sequence

MEQYIARAAIPNPPPLPLNSQHLSGRTTLFNRLFAAVYAGAILSLFYYHLTSLLKSPTSVSSFFVSISLFISDVVLAFLWATTQCNRMIPLRRREFPNNLKQLLKNDSDFPALDVFICTADPYKEPPINVINTALSVLAYDYPTTKISVYISDDGGSAVTLFAFMEAARFAAEWLPFCRKNHVVERNPEAFFESNKDLNSESEKIKKI

Homology

[Close]

BLAST of CmaCh16G005300 vs. Swiss-Prot
Match: CSLG3_ARATH (Cellulose synthase-like protein G3 OS=Arabidopsis thaliana GN=CSLG3 PE=2 SV=2)

HSP 1 Score: 188.0 bits (476), Expect = 1.1e-46
Identity = 95/182 (52.20%), Postives = 133/182 (73.08%), Query Frame = 1


Query: 26  RTTLFNRLFAAVYAGAILSLFYYHLTSLLKSPTSVSSFFVSISLFISDVVLAFLWATTQC 85
           R T+  R++A  +   I++L Y+H+ SLL + T++    ++  L +SD+VLAF+WATT  
Sbjct: 40  RRTIPYRIYAVFHTCGIIALMYHHVHSLLTANTTL----ITSLLLLSDIVLAFMWATTTS 99

Query: 86  NRMIPLRRREFPNNLKQLLKNDSDFPALDVFICTADPYKEPPINVINTALSVLAYDYPTT 145
            R  P+RR E+P   ++      DFP LDVFICTADPYKEPP+ V+NTALSV+AY+YP+ 
Sbjct: 100 LRYKPVRRTEYP---EKYAAEPEDFPKLDVFICTADPYKEPPMMVVNTALSVMAYEYPSD 159

Query: 146 KISVYISDDGGSAVTLFAFMEAARFAAEWLPFCRKNHVVERNPEAFFESN-KDLNSESEK 205
           KISVY+SDDGGS++TLFA MEAA+F+  WLPFC+KN+V +R+PE +F S  +  + E+E 
Sbjct: 160 KISVYVSDDGGSSLTLFALMEAAKFSKHWLPFCKKNNVQDRSPEVYFSSKLRSRSDEAEN 214

Query: 206 IK 207
           IK
Sbjct: 220 IK 214

[Close]

BLAST of CmaCh16G005300 vs. Swiss-Prot
Match: CSLG2_ARATH (Cellulose synthase-like protein G2 OS=Arabidopsis thaliana GN=CSLG2 PE=2 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 7.7e-45
Identity = 90/182 (49.45%), Postives = 131/182 (71.98%), Query Frame = 1


Query: 26  RTTLFNRLFAAVYAGAILSLFYYHLTSLLKSPTSVSSFFVSISLFISDVVLAFLWATTQC 85
           R T+  R++A  +   I++L Y+H+ S++ +  ++    ++  L +SD+VLAF+WATT  
Sbjct: 18  RRTIPYRIYAVFHTCGIIALMYHHVHSIVNANNTL----ITCLLLLSDIVLAFMWATTTS 77

Query: 86  NRMIPLRRREFPNNLKQLLKNDSDFPALDVFICTADPYKEPPINVINTALSVLAYDYPTT 145
            R+ P+ R E+P   ++      DFP LDVFICTADPYKEPP+ V+NTALSV+AY+YP+ 
Sbjct: 78  LRLNPIHRTEYP---EKYAAKPEDFPKLDVFICTADPYKEPPMMVVNTALSVMAYEYPSH 137

Query: 146 KISVYISDDGGSAVTLFAFMEAARFAAEWLPFCRKNHVVERNPEAFFESNKDLNS-ESEK 205
           KISVY+SDDGGS++TLFA MEAA+F+  WLPFC+ N+V +R+PE +F S    +S E+E 
Sbjct: 138 KISVYVSDDGGSSLTLFALMEAAKFSKHWLPFCKNNNVQDRSPEVYFSSKSHSSSDEAEN 192

Query: 206 IK 207
           +K
Sbjct: 198 LK 192

[Close]

BLAST of CmaCh16G005300 vs. Swiss-Prot
Match: CSLG1_ARATH (Cellulose synthase-like protein G1 OS=Arabidopsis thaliana GN=CSLG1 PE=2 SV=1)

HSP 1 Score: 178.3 bits (451), Expect = 8.5e-44
Identity = 90/182 (49.45%), Postives = 130/182 (71.43%), Query Frame = 1


Query: 26  RTTLFNRLFAAVYAGAILSLFYYHLTSLLKSPTSVSSFFVSISLFISDVVLAFLWATTQC 85
           R T+  R++A  +   I++L Y+H+ SL+    + ++  ++  L +SD+VLAF+WATT  
Sbjct: 21  RRTIPYRIYAIFHTCGIIALMYHHVHSLV----TANNTLITCLLLLSDIVLAFMWATTTS 80

Query: 86  NRMIPLRRREFPNNLKQLLKNDSDFPALDVFICTADPYKEPPINVINTALSVLAYDYPTT 145
            R+ P+ R E P   ++      DFP LDVFICTADPYKEPP+ V+NTALSV+AY+YP+ 
Sbjct: 81  LRLNPVHRTECP---EKYAAKPEDFPKLDVFICTADPYKEPPMMVVNTALSVMAYEYPSD 140

Query: 146 KISVYISDDGGSAVTLFAFMEAARFAAEWLPFCRKNHVVERNPEAFFESNKDLNS-ESEK 205
           KISVY+SDDGGS++T FA +EAA+F+ +WLPFC+KN+V +R+PE +F S     S E+E 
Sbjct: 141 KISVYVSDDGGSSLTFFALIEAAKFSKQWLPFCKKNNVQDRSPEVYFSSESHSRSDEAEN 195

Query: 206 IK 207
           +K
Sbjct: 201 LK 195

[Close]

BLAST of CmaCh16G005300 vs. Swiss-Prot
Match: CSLE6_ORYSJ (Cellulose synthase-like protein E6 OS=Oryza sativa subsp. japonica GN=CSLE6 PE=2 SV=1)

HSP 1 Score: 138.7 bits (348), Expect = 7.5e-32
Identity = 73/165 (44.24%), Postives = 103/165 (62.42%), Query Frame = 1


Query: 32  RLFAAVYAGAILSLFYYHLTSLLKSPTSVSSFFVSISLFISDVVLAFLWATTQCNRMIPL 91
           RL AA  A  IL + YY  T +   P +       + +  +++  A  W  TQ  R  P+
Sbjct: 24  RLQAATVAAGILLVLYYRATRV---PAAGEGRAAWLGMAAAELWFAVYWVITQSVRWCPV 83

Query: 92  RRREFPNNLKQLLKNDSDFPALDVFICTADPYKEPPINVINTALSVLAYDYPTTKISVYI 151
           RRR F N L +  K +   P +DVF+CTADP+ EPP  VI+T LSV+AY+YP+ KISVY+
Sbjct: 84  RRRTFKNRLAERYKEN--LPGVDVFVCTADPHAEPPSLVISTILSVMAYNYPSEKISVYL 143

Query: 152 SDDGGSAVTLFAFMEAARFAAEWLPFCRKNHVVERNPEAFFESNK 197
           SDDGGS +T +A  EA+ FA +WLPFCR+ ++  R+P A+F  ++
Sbjct: 144 SDDGGSILTFYALWEASMFAKKWLPFCRRYNIEPRSPAAYFSESE 183

[Close]

BLAST of CmaCh16G005300 vs. Swiss-Prot
Match: CSLE1_ORYSJ (Cellulose synthase-like protein E1 OS=Oryza sativa subsp. japonica GN=CSLE1 PE=2 SV=2)

HSP 1 Score: 134.8 bits (338), Expect = 1.1e-30
Identity = 77/196 (39.29%), Postives = 112/196 (57.14%), Query Frame = 1


Query: 1   MEQYIARAAIPNPPPLPLNSQHLSGRTTLFNRLFAAVYAGAILSLFYYHLTSLLKSPTSV 60
           ME   A  A     PL   ++ L GR     R+ AA  A  IL + YY  T +   P + 
Sbjct: 1   METTAAATAAERRRPL-FTTEELGGRAVY--RVQAATVAAGILLVLYYRATRV---PAAG 60

Query: 61  SSFFVSISLFISDVVLAFLWATTQCNRMIPLRRREFPNNLKQLLKNDSDFPALDVFICTA 120
                 + +  +++  A  W   Q  R  P RRR F + L +  + + + P +D+F+CTA
Sbjct: 61  EGRAAWLGMAAAELWFAVYWVIAQSVRWRPFRRRTFRDRLAE--RYEQNLPGVDIFVCTA 120

Query: 121 DPYKEPPINVINTALSVLAYDYPTTKISVYISDDGGSAVTLFAFMEAARFAAEWLPFCRK 180
           DP  EPP  VI+T LSV+AY+YP+ KISVY+SDDGGS +T +A  EA+ FA +WLPFC++
Sbjct: 121 DPQSEPPSLVISTILSVMAYNYPSEKISVYLSDDGGSILTFYALWEASIFAKKWLPFCKR 180

Query: 181 NHVVERNPEAFFESNK 197
            ++  R+P A+F  +K
Sbjct: 181 YNIEPRSPAAYFSESK 188

[Close]

BLAST of CmaCh16G005300 vs. TrEMBL
Match: A0A0A0KYH1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G054290 PE=3 SV=1)

HSP 1 Score: 293.9 bits (751), Expect = 1.5e-76
Identity = 153/211 (72.51%), Postives = 175/211 (82.94%), Query Frame = 1


Query: 1   MEQY---IARAAIPNPPPLPLNSQHLSGRTTLFNRLFAAVYAGAILSLFYYHLTSLLKSP 60
           ME+Y    A AA  NP PL  ++QH+S R T FNRLFAA+Y+ AI +LFYYH +SLL +P
Sbjct: 26  MEEYRAPAAAAAAANPLPLNSHTQHISPRATTFNRLFAALYSLAIFALFYYHFSSLL-NP 85

Query: 61  TSVSSFFVSISLFISDVVLAFLWATTQCNRMIPLRRREFPNNLKQLLKNDSDFPALDVFI 120
            S +SFF+S+SLFISD+VLAFLW   Q NRM PLRRREF  NLK LLK DSDFPALDVFI
Sbjct: 86  ISFTSFFISLSLFISDLVLAFLWVACQTNRMNPLRRREFLGNLKLLLKKDSDFPALDVFI 145

Query: 121 CTADPYKEPPINVINTALSVLAYDYPTTKISVYISDDGGSAVTLFAFMEAARFAAEWLPF 180
           CTADPYKEPP+NV+NTALSV+AYDYPT+KISVY+SDDGGSA+TLFAFMEAA+FAA WLPF
Sbjct: 146 CTADPYKEPPMNVVNTALSVMAYDYPTSKISVYVSDDGGSALTLFAFMEAAKFAAVWLPF 205

Query: 181 CRKNHVVERNPEAFFESNKD--LNSESEKIK 207
           C+KN VVERNP+AFF SNKD   N E EKIK
Sbjct: 206 CKKNDVVERNPDAFFASNKDYYCNPEMEKIK 235

[Close]

BLAST of CmaCh16G005300 vs. TrEMBL
Match: A0A0A0KYG4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G053260 PE=3 SV=1)

HSP 1 Score: 292.4 bits (747), Expect = 4.5e-76
Identity = 150/206 (72.82%), Postives = 172/206 (83.50%), Query Frame = 1


Query: 1   MEQYIARAAIPNPPPLPLNSQHLSGRTTLFNRLFAAVYAGAILSLFYYHLTSLLKSPTSV 60
           ME   ARAA      L LNS+H+  R T FNRLFA +YA  +L+LFYYH++SLL S TS+
Sbjct: 1   MEDTRARAAAK---ALQLNSKHIPSRATTFNRLFAPIYAVGLLALFYYHISSLLNS-TSL 60

Query: 61  SSFFVSISLFISDVVLAFLWATTQCNRMIPLRRREFPNNLKQLLKNDSDFPALDVFICTA 120
            SFF+SISLFISD +LAF+WAT Q  RM PLRRREFP NLK+LLKNDSDFPALDVFICTA
Sbjct: 61  GSFFISISLFISDAILAFMWATAQSFRMNPLRRREFPANLKELLKNDSDFPALDVFICTA 120

Query: 121 DPYKEPPINVINTALSVLAYDYPTTKISVYISDDGGSAVTLFAFMEAARFAAEWLPFCRK 180
           DPY+EPP+NV+NTALSV+A+DYPT+KISVY+SDDGGSA+TLFAFMEAARFAA WLPFC K
Sbjct: 121 DPYQEPPMNVVNTALSVMAFDYPTSKISVYVSDDGGSAMTLFAFMEAARFAATWLPFCTK 180

Query: 181 NHVVERNPEAFFESNKDLNSESEKIK 207
           N VVERNP+AFF SN D  SE E+IK
Sbjct: 181 NDVVERNPDAFFTSNHDWFSEREEIK 202

[Close]

BLAST of CmaCh16G005300 vs. TrEMBL
Match: A0A0A0KZX5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G054280 PE=3 SV=1)

HSP 1 Score: 290.0 bits (741), Expect = 2.2e-75
Identity = 148/206 (71.84%), Postives = 170/206 (82.52%), Query Frame = 1


Query: 1   MEQYIARAAIPNPPPLPLNSQHLSGRTTLFNRLFAAVYAGAILSLFYYHLTSLLKSPTSV 60
           ME   ARAA        LNSQH+S  T  FNR FAA+Y   +L+LFYYH+TSLL S TS+
Sbjct: 1   MENMRARAAAK---AFLLNSQHISPLTITFNRFFAAIYGAGLLALFYYHITSLLNS-TSL 60

Query: 61  SSFFVSISLFISDVVLAFLWATTQCNRMIPLRRREFPNNLKQLLKNDSDFPALDVFICTA 120
            SF++S+SLFISD VLAF+WAT Q  RM PLRRREFP NLK+LL+ DSDFPALDVFICTA
Sbjct: 61  GSFYLSVSLFISDAVLAFMWATAQAFRMNPLRRREFPANLKELLEKDSDFPALDVFICTA 120

Query: 121 DPYKEPPINVINTALSVLAYDYPTTKISVYISDDGGSAVTLFAFMEAARFAAEWLPFCRK 180
           DPYKEPP+NV+NTALSV+AYDYP +KISVY+SDDGGSA+TLFAFMEAARFAA WLPFCRK
Sbjct: 121 DPYKEPPMNVVNTALSVMAYDYPISKISVYVSDDGGSALTLFAFMEAARFAAAWLPFCRK 180

Query: 181 NHVVERNPEAFFESNKDLNSESEKIK 207
           N VV+RNP+ FF SN  LNSE+E+IK
Sbjct: 181 NDVVDRNPDVFFTSNYHLNSETEEIK 202

[Close]

BLAST of CmaCh16G005300 vs. TrEMBL
Match: A0A0A0KV52_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G053270 PE=4 SV=1)

HSP 1 Score: 286.2 bits (731), Expect = 3.2e-74
Identity = 147/208 (70.67%), Postives = 171/208 (82.21%), Query Frame = 1


Query: 1   MEQYIARAAIPNPPPLPLNSQHLSGRTTLFNRLFAAVYAGAILSLFYYHLTSLLKSPTSV 60
           ME   ARAA  +     LNSQH+  R T FNRLFA +YA  + +LFYYHLTSL+ S TS+
Sbjct: 1   MEDIRARAAAED---FQLNSQHIPSRLTTFNRLFALIYACGLFALFYYHLTSLINS-TSL 60

Query: 61  SSFFVSISLFISDVVLAFLWATTQCNRMIPLRRREFPNNLKQLLKNDSDFPALDVFICTA 120
            SFF+S+SLFISD VLAF+W +TQ  RM PLRRREFP NLK+LLK DSDFPA+DVFICTA
Sbjct: 61  GSFFISVSLFISDAVLAFMWVSTQSFRMNPLRRREFPANLKELLKKDSDFPAIDVFICTA 120

Query: 121 DPYKEPPINVINTALSVLAYDYPTTKISVYISDDGGSAVTLFAFMEAARFAAEWLPFCRK 180
           DPYKEPP+NV+NTALSV+AY YPT+K SVY+SDDGGSA+TLFAFMEAARFAA WLPFCR+
Sbjct: 121 DPYKEPPMNVVNTALSVMAYHYPTSKTSVYVSDDGGSAMTLFAFMEAARFAATWLPFCRE 180

Query: 181 NHVVERNPEAFF--ESNKDLNSESEKIK 207
           N VV+RNP AFF   SN+D NSE+E+IK
Sbjct: 181 NDVVDRNPNAFFTSTSNQDWNSETEEIK 204

[Close]

BLAST of CmaCh16G005300 vs. TrEMBL
Match: A0A0A0KUZ9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G053780 PE=3 SV=1)

HSP 1 Score: 279.3 bits (713), Expect = 3.9e-72
Identity = 144/208 (69.23%), Postives = 171/208 (82.21%), Query Frame = 1


Query: 1   MEQYIARAAIPNPPPLPLNSQHLSGRTTLFNRLFAAVYAGAILSLFYYHLTSLLKSPTSV 60
           ME   ARAA+     L LNSQH+S R T FNR FAA+Y   +L+LFYYH+TSLL S TS 
Sbjct: 1   MEDMRARAAVKG---LLLNSQHIS-RATTFNRFFAAIYGAGLLALFYYHITSLLNS-TSS 60

Query: 61  SSFFVSISLFISDVVLAFLWATTQCNRMIPLRRREFPNNLKQLLKNDSDFPALDVFICTA 120
            SFF+S+SLFISD VLAF+W  +Q  RM  LRRRE+P NLK+LLK DSDFPALDVFICTA
Sbjct: 61  GSFFLSVSLFISDAVLAFMWVNSQALRMYLLRRREYPANLKELLKKDSDFPALDVFICTA 120

Query: 121 DPYKEPPINVINTALSVLAYDYPTTKISVYISDDGGSAVTLFAFMEAARFAAEWLPFCRK 180
           DPYKEPP+N +NTALSV+AYDYPT+K+SVY+SDDGGSA+TLFAFM AA+FAA+WLPFCR+
Sbjct: 121 DPYKEPPMNAVNTALSVMAYDYPTSKVSVYVSDDGGSAMTLFAFMVAAKFAAKWLPFCRE 180

Query: 181 NHVVERNPEAFF--ESNKDLNSESEKIK 207
           N +V+RNP AFF  +SN D NSE+E+IK
Sbjct: 181 NGIVDRNPNAFFRSKSNHDWNSETEEIK 203

[Close]

BLAST of CmaCh16G005300 vs. TAIR10
Match: AT4G23990.1 (AT4G23990.1 cellulose synthase like G3)

HSP 1 Score: 188.0 bits (476), Expect = 6.0e-48
Identity = 95/182 (52.20%), Postives = 133/182 (73.08%), Query Frame = 1


Query: 26  RTTLFNRLFAAVYAGAILSLFYYHLTSLLKSPTSVSSFFVSISLFISDVVLAFLWATTQC 85
           R T+  R++A  +   I++L Y+H+ SLL + T++    ++  L +SD+VLAF+WATT  
Sbjct: 40  RRTIPYRIYAVFHTCGIIALMYHHVHSLLTANTTL----ITSLLLLSDIVLAFMWATTTS 99

Query: 86  NRMIPLRRREFPNNLKQLLKNDSDFPALDVFICTADPYKEPPINVINTALSVLAYDYPTT 145
            R  P+RR E+P   ++      DFP LDVFICTADPYKEPP+ V+NTALSV+AY+YP+ 
Sbjct: 100 LRYKPVRRTEYP---EKYAAEPEDFPKLDVFICTADPYKEPPMMVVNTALSVMAYEYPSD 159

Query: 146 KISVYISDDGGSAVTLFAFMEAARFAAEWLPFCRKNHVVERNPEAFFESN-KDLNSESEK 205
           KISVY+SDDGGS++TLFA MEAA+F+  WLPFC+KN+V +R+PE +F S  +  + E+E 
Sbjct: 160 KISVYVSDDGGSSLTLFALMEAAKFSKHWLPFCKKNNVQDRSPEVYFSSKLRSRSDEAEN 214

Query: 206 IK 207
           IK
Sbjct: 220 IK 214

[Close]

BLAST of CmaCh16G005300 vs. TAIR10
Match: AT4G24000.1 (AT4G24000.1 cellulose synthase like G2)

HSP 1 Score: 181.8 bits (460), Expect = 4.3e-46
Identity = 90/182 (49.45%), Postives = 131/182 (71.98%), Query Frame = 1


Query: 26  RTTLFNRLFAAVYAGAILSLFYYHLTSLLKSPTSVSSFFVSISLFISDVVLAFLWATTQC 85
           R T+  R++A  +   I++L Y+H+ S++ +  ++    ++  L +SD+VLAF+WATT  
Sbjct: 18  RRTIPYRIYAVFHTCGIIALMYHHVHSIVNANNTL----ITCLLLLSDIVLAFMWATTTS 77

Query: 86  NRMIPLRRREFPNNLKQLLKNDSDFPALDVFICTADPYKEPPINVINTALSVLAYDYPTT 145
            R+ P+ R E+P   ++      DFP LDVFICTADPYKEPP+ V+NTALSV+AY+YP+ 
Sbjct: 78  LRLNPIHRTEYP---EKYAAKPEDFPKLDVFICTADPYKEPPMMVVNTALSVMAYEYPSH 137

Query: 146 KISVYISDDGGSAVTLFAFMEAARFAAEWLPFCRKNHVVERNPEAFFESNKDLNS-ESEK 205
           KISVY+SDDGGS++TLFA MEAA+F+  WLPFC+ N+V +R+PE +F S    +S E+E 
Sbjct: 138 KISVYVSDDGGSSLTLFALMEAAKFSKHWLPFCKNNNVQDRSPEVYFSSKSHSSSDEAEN 192

Query: 206 IK 207
           +K
Sbjct: 198 LK 192

[Close]

BLAST of CmaCh16G005300 vs. TAIR10
Match: AT4G24010.1 (AT4G24010.1 cellulose synthase like G1)

HSP 1 Score: 178.3 bits (451), Expect = 4.8e-45
Identity = 90/182 (49.45%), Postives = 130/182 (71.43%), Query Frame = 1


Query: 26  RTTLFNRLFAAVYAGAILSLFYYHLTSLLKSPTSVSSFFVSISLFISDVVLAFLWATTQC 85
           R T+  R++A  +   I++L Y+H+ SL+    + ++  ++  L +SD+VLAF+WATT  
Sbjct: 21  RRTIPYRIYAIFHTCGIIALMYHHVHSLV----TANNTLITCLLLLSDIVLAFMWATTTS 80

Query: 86  NRMIPLRRREFPNNLKQLLKNDSDFPALDVFICTADPYKEPPINVINTALSVLAYDYPTT 145
            R+ P+ R E P   ++      DFP LDVFICTADPYKEPP+ V+NTALSV+AY+YP+ 
Sbjct: 81  LRLNPVHRTECP---EKYAAKPEDFPKLDVFICTADPYKEPPMMVVNTALSVMAYEYPSD 140

Query: 146 KISVYISDDGGSAVTLFAFMEAARFAAEWLPFCRKNHVVERNPEAFFESNKDLNS-ESEK 205
           KISVY+SDDGGS++T FA +EAA+F+ +WLPFC+KN+V +R+PE +F S     S E+E 
Sbjct: 141 KISVYVSDDGGSSLTFFALIEAAKFSKQWLPFCKKNNVQDRSPEVYFSSESHSRSDEAEN 195

Query: 206 IK 207
           +K
Sbjct: 201 LK 195

[Close]

BLAST of CmaCh16G005300 vs. TAIR10
Match: AT1G55850.1 (AT1G55850.1 cellulose synthase like E1)

HSP 1 Score: 127.1 bits (318), Expect = 1.3e-29
Identity = 73/186 (39.25%), Postives = 110/186 (59.14%), Query Frame = 1


Query: 24  SGRTTLFNRLFAAVYAGAILSLFYYHLTSLLKSPTSVSSFFVSISLFISDVVLAFLWATT 83
           +GR   + R F+A     I  +++Y +  +  + T V    +   +FI ++     W  T
Sbjct: 26  TGRVIAY-RFFSASVFVCICLIWFYRIGEIGDNRT-VLDRLIWFVMFIVEIWFGLYWVVT 85

Query: 84  QCNRMIPLRRREFPNNLKQLLKNDSDFPALDVFICTADPYKEPPINVINTALSVLAYDYP 143
           Q +R  P+ R  F + L +  +  SD P LDVF+CTADP  EPP+ V+NT LSV A DYP
Sbjct: 86  QSSRWNPVWRFPFSDRLSR--RYGSDLPRLDVFVCTADPVIEPPLLVVNTVLSVTALDYP 145

Query: 144 TTKISVYISDDGGSAVTLFAFMEAARFAAEWLPFCRKNHVVERNPEAFFESNKD-LNSES 203
             K++VY+SDDGGS +T +A  EAA FA  W+PFC+K +V   +P A+  S  + L+S +
Sbjct: 146 PEKLAVYLSDDGGSELTFYALTEAAEFAKTWVPFCKKFNVEPTSPAAYLSSKANCLDSAA 205

Query: 204 EKIKKI 209
           E++ K+
Sbjct: 206 EEVAKL 207

[Close]

BLAST of CmaCh16G005300 vs. TAIR10
Match: AT3G03050.1 (AT3G03050.1 cellulose synthase-like D3)

HSP 1 Score: 116.3 bits (290), Expect = 2.2e-26
Identity = 59/151 (39.07%), Postives = 90/151 (59.60%), Query Frame = 1


Query: 55  KSPTSVSSFFVSISLFISDVVLAFLWATTQCNRMIPLRRREFPNNLKQLLKND------- 114
           K+P ++  + +S+   + ++  A  W   Q  ++ P+ R    N LK+  +         
Sbjct: 315 KNPDAIWLWGMSV---VCELWFALSWLLDQLPKLCPINRATDLNVLKEKFETPTPSNPTG 374

Query: 115 -SDFPALDVFICTADPYKEPPINVINTALSVLAYDYPTTKISVYISDDGGSAVTLFAFME 174
            SD P LD+F+ TADP KEPP+   NT LS+LA DYP  K++ Y+SDDGG+ +T  A  E
Sbjct: 375 KSDLPGLDMFVSTADPEKEPPLVTSNTILSILAADYPVEKLACYVSDDGGALLTFEAMAE 434

Query: 175 AARFAAEWLPFCRKNHVVERNPEAFFESNKD 198
           AA FA  W+PFCRK+++  RNP+++F   +D
Sbjct: 435 AASFANMWVPFCRKHNIEPRNPDSYFSLKRD 462

[Close]

BLAST of CmaCh16G005300 vs. NCBI nr
Match: gi|659102035|ref|XP_008451918.1| (PREDICTED: cellulose synthase-like protein G3 [Cucumis melo])

HSP 1 Score: 296.6 bits (758), Expect = 3.4e-77
Identity = 146/191 (76.44%), Postives = 168/191 (87.96%), Query Frame = 1


Query: 16  LPLNSQHLSGRTTLFNRLFAAVYAGAILSLFYYHLTSLLKSPTSVSSFFVSISLFISDVV 75
           L LNSQH+    T FNRLFA +YAG +L+LFYYH+TSLL S TS+ SFF+S+SLFISDVV
Sbjct: 13  LQLNSQHIPSLATTFNRLFAPIYAGGLLALFYYHVTSLLNS-TSLGSFFISVSLFISDVV 72

Query: 76  LAFLWATTQCNRMIPLRRREFPNNLKQLLKNDSDFPALDVFICTADPYKEPPINVINTAL 135
           LAF+WAT Q  RM P+RRREFP NLK+LLK DSDFPA+DVFICTADPYKEPP+NV+NTAL
Sbjct: 73  LAFMWATAQSFRMNPVRRREFPANLKELLKKDSDFPAMDVFICTADPYKEPPMNVVNTAL 132

Query: 136 SVLAYDYPTTKISVYISDDGGSAVTLFAFMEAARFAAEWLPFCRKNHVVERNPEAFFESN 195
           SV+AYDYPT+KISVY+SDDGGSA+TLFAFMEAARFAA WLPFCRKN VV+RNP+AFF SN
Sbjct: 133 SVMAYDYPTSKISVYVSDDGGSAMTLFAFMEAARFAATWLPFCRKNDVVDRNPDAFFTSN 192

Query: 196 KDLNSESEKIK 207
              NSE+E+IK
Sbjct: 193 HGSNSETEEIK 202

[Close]

BLAST of CmaCh16G005300 vs. NCBI nr
Match: gi|659102037|ref|XP_008451919.1| (PREDICTED: cellulose synthase-like protein G3 [Cucumis melo])

HSP 1 Score: 295.8 bits (756), Expect = 5.8e-77
Identity = 157/213 (73.71%), Postives = 178/213 (83.57%), Query Frame = 1


Query: 1   MEQYIARAAIPN---PPPLPLNS--QHLSGRTTLFNRLFAAVYAGAILSLFYYHLTSLLK 60
           ME+Y ARAA      P PLPLNS  QH+S R T FNRLFAA+Y+ AIL+LFY+HL+SLL 
Sbjct: 1   MEEYRARAAAAAAAAPKPLPLNSHTQHISPRATTFNRLFAALYSLAILALFYHHLSSLL- 60

Query: 61  SPTSVSSFFVSISLFISDVVLAFLWATTQCNRMIPLRRREFPNNLKQLLKNDSDFPALDV 120
           +P S +SFF+S+SLFISD+VLAF W   Q NRM PLRRREF  NLK LL+ DSDFPALDV
Sbjct: 61  NPISFTSFFISLSLFISDLVLAFSWVACQSNRMNPLRRREFLGNLKLLLEKDSDFPALDV 120

Query: 121 FICTADPYKEPPINVINTALSVLAYDYPTTKISVYISDDGGSAVTLFAFMEAARFAAEWL 180
           FICTADPYKEPP+NV+NTALSV+AYDYPT+KISVY+SDDGGSA+TLFAFMEAA+FAA WL
Sbjct: 121 FICTADPYKEPPMNVVNTALSVMAYDYPTSKISVYVSDDGGSALTLFAFMEAAKFAAVWL 180

Query: 181 PFCRKNHVVERNPEAFFESNKD--LNSESEKIK 207
           PFCRKN VVERNP+AFF SNKD   N E EKIK
Sbjct: 181 PFCRKNEVVERNPDAFFASNKDYYCNPEMEKIK 212

[Close]

BLAST of CmaCh16G005300 vs. NCBI nr
Match: gi|778691128|ref|XP_004149007.2| (PREDICTED: cellulose synthase-like protein G2 [Cucumis sativus])

HSP 1 Score: 293.9 bits (751), Expect = 2.2e-76
Identity = 153/211 (72.51%), Postives = 175/211 (82.94%), Query Frame = 1


Query: 1   MEQY---IARAAIPNPPPLPLNSQHLSGRTTLFNRLFAAVYAGAILSLFYYHLTSLLKSP 60
           ME+Y    A AA  NP PL  ++QH+S R T FNRLFAA+Y+ AI +LFYYH +SLL +P
Sbjct: 26  MEEYRAPAAAAAAANPLPLNSHTQHISPRATTFNRLFAALYSLAIFALFYYHFSSLL-NP 85

Query: 61  TSVSSFFVSISLFISDVVLAFLWATTQCNRMIPLRRREFPNNLKQLLKNDSDFPALDVFI 120
            S +SFF+S+SLFISD+VLAFLW   Q NRM PLRRREF  NLK LLK DSDFPALDVFI
Sbjct: 86  ISFTSFFISLSLFISDLVLAFLWVACQTNRMNPLRRREFLGNLKLLLKKDSDFPALDVFI 145

Query: 121 CTADPYKEPPINVINTALSVLAYDYPTTKISVYISDDGGSAVTLFAFMEAARFAAEWLPF 180
           CTADPYKEPP+NV+NTALSV+AYDYPT+KISVY+SDDGGSA+TLFAFMEAA+FAA WLPF
Sbjct: 146 CTADPYKEPPMNVVNTALSVMAYDYPTSKISVYVSDDGGSALTLFAFMEAAKFAAVWLPF 205

Query: 181 CRKNHVVERNPEAFFESNKD--LNSESEKIK 207
           C+KN VVERNP+AFF SNKD   N E EKIK
Sbjct: 206 CKKNDVVERNPDAFFASNKDYYCNPEMEKIK 235

[Close]

BLAST of CmaCh16G005300 vs. NCBI nr
Match: gi|778697527|ref|XP_004149010.2| (PREDICTED: cellulose synthase-like protein G2 [Cucumis sativus])

HSP 1 Score: 292.4 bits (747), Expect = 6.4e-76
Identity = 150/206 (72.82%), Postives = 172/206 (83.50%), Query Frame = 1


Query: 1   MEQYIARAAIPNPPPLPLNSQHLSGRTTLFNRLFAAVYAGAILSLFYYHLTSLLKSPTSV 60
           ME   ARAA      L LNS+H+  R T FNRLFA +YA  +L+LFYYH++SLL S TS+
Sbjct: 1   MEDTRARAAAK---ALQLNSKHIPSRATTFNRLFAPIYAVGLLALFYYHISSLLNS-TSL 60

Query: 61  SSFFVSISLFISDVVLAFLWATTQCNRMIPLRRREFPNNLKQLLKNDSDFPALDVFICTA 120
            SFF+SISLFISD +LAF+WAT Q  RM PLRRREFP NLK+LLKNDSDFPALDVFICTA
Sbjct: 61  GSFFISISLFISDAILAFMWATAQSFRMNPLRRREFPANLKELLKNDSDFPALDVFICTA 120

Query: 121 DPYKEPPINVINTALSVLAYDYPTTKISVYISDDGGSAVTLFAFMEAARFAAEWLPFCRK 180
           DPY+EPP+NV+NTALSV+A+DYPT+KISVY+SDDGGSA+TLFAFMEAARFAA WLPFC K
Sbjct: 121 DPYQEPPMNVVNTALSVMAFDYPTSKISVYVSDDGGSAMTLFAFMEAARFAATWLPFCTK 180

Query: 181 NHVVERNPEAFFESNKDLNSESEKIK 207
           N VVERNP+AFF SN D  SE E+IK
Sbjct: 181 NDVVERNPDAFFTSNHDWFSEREEIK 202

[Close]

BLAST of CmaCh16G005300 vs. NCBI nr
Match: gi|449462559|ref|XP_004149008.1| (PREDICTED: cellulose synthase-like protein G2 [Cucumis sativus])

HSP 1 Score: 290.0 bits (741), Expect = 3.2e-75
Identity = 148/206 (71.84%), Postives = 170/206 (82.52%), Query Frame = 1


Query: 1   MEQYIARAAIPNPPPLPLNSQHLSGRTTLFNRLFAAVYAGAILSLFYYHLTSLLKSPTSV 60
           ME   ARAA        LNSQH+S  T  FNR FAA+Y   +L+LFYYH+TSLL S TS+
Sbjct: 1   MENMRARAAAK---AFLLNSQHISPLTITFNRFFAAIYGAGLLALFYYHITSLLNS-TSL 60

Query: 61  SSFFVSISLFISDVVLAFLWATTQCNRMIPLRRREFPNNLKQLLKNDSDFPALDVFICTA 120
            SF++S+SLFISD VLAF+WAT Q  RM PLRRREFP NLK+LL+ DSDFPALDVFICTA
Sbjct: 61  GSFYLSVSLFISDAVLAFMWATAQAFRMNPLRRREFPANLKELLEKDSDFPALDVFICTA 120

Query: 121 DPYKEPPINVINTALSVLAYDYPTTKISVYISDDGGSAVTLFAFMEAARFAAEWLPFCRK 180
           DPYKEPP+NV+NTALSV+AYDYP +KISVY+SDDGGSA+TLFAFMEAARFAA WLPFCRK
Sbjct: 121 DPYKEPPMNVVNTALSVMAYDYPISKISVYVSDDGGSALTLFAFMEAARFAAAWLPFCRK 180

Query: 181 NHVVERNPEAFFESNKDLNSESEKIK 207
           N VV+RNP+ FF SN  LNSE+E+IK
Sbjct: 181 NDVVDRNPDVFFTSNYHLNSETEEIK 202

The following BLAST results are available for this feature:

BLAST of CmaCh16G005300 vs. Swiss-Prot


Match Name	E-value	Identity	Description
CSLG3_ARATH	1.1e-46	52.20	Cellulose synthase-like protein G3 OS=Arabidopsis thaliana GN=CSLG3 PE=2 SV=2	[more]
CSLG2_ARATH	7.7e-45	49.45	Cellulose synthase-like protein G2 OS=Arabidopsis thaliana GN=CSLG2 PE=2 SV=1	[more]
CSLG1_ARATH	8.5e-44	49.45	Cellulose synthase-like protein G1 OS=Arabidopsis thaliana GN=CSLG1 PE=2 SV=1	[more]
CSLE6_ORYSJ	7.5e-32	44.24	Cellulose synthase-like protein E6 OS=Oryza sativa subsp. japonica GN=CSLE6 PE=2...	[more]
CSLE1_ORYSJ	1.1e-30	39.29	Cellulose synthase-like protein E1 OS=Oryza sativa subsp. japonica GN=CSLE1 PE=2...	[more]

BLAST of CmaCh16G005300 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KYH1_CUCSA	1.5e-76	72.51	Uncharacterized protein OS=Cucumis sativus GN=Csa_4G054290 PE=3 SV=1	[more]
A0A0A0KYG4_CUCSA	4.5e-76	72.82	Uncharacterized protein OS=Cucumis sativus GN=Csa_4G053260 PE=3 SV=1	[more]
A0A0A0KZX5_CUCSA	2.2e-75	71.84	Uncharacterized protein OS=Cucumis sativus GN=Csa_4G054280 PE=3 SV=1	[more]
A0A0A0KV52_CUCSA	3.2e-74	70.67	Uncharacterized protein OS=Cucumis sativus GN=Csa_4G053270 PE=4 SV=1	[more]
A0A0A0KUZ9_CUCSA	3.9e-72	69.23	Uncharacterized protein OS=Cucumis sativus GN=Csa_4G053780 PE=3 SV=1	[more]

BLAST of CmaCh16G005300 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G23990.1	6.0e-48	52.20	cellulose synthase like G3	[more]
AT4G24000.1	4.3e-46	49.45	cellulose synthase like G2	[more]
AT4G24010.1	4.8e-45	49.45	cellulose synthase like G1	[more]
AT1G55850.1	1.3e-29	39.25	cellulose synthase like E1	[more]
AT3G03050.1	2.2e-26	39.07	cellulose synthase-like D3	[more]

BLAST of CmaCh16G005300 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659102035\|ref\|XP_008451918.1\|	3.4e-77	76.44	PREDICTED: cellulose synthase-like protein G3 [Cucumis melo]	[more]
gi\|659102037\|ref\|XP_008451919.1\|	5.8e-77	73.71	PREDICTED: cellulose synthase-like protein G3 [Cucumis melo]	[more]
gi\|778691128\|ref\|XP_004149007.2\|	2.2e-76	72.51	PREDICTED: cellulose synthase-like protein G2 [Cucumis sativus]	[more]
gi\|778697527\|ref\|XP_004149010.2\|	6.4e-76	72.82	PREDICTED: cellulose synthase-like protein G2 [Cucumis sativus]	[more]
gi\|449462559\|ref\|XP_004149008.1\|	3.2e-75	71.84	PREDICTED: cellulose synthase-like protein G2 [Cucumis sativus]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR005150	Cellulose_synth

Vocabulary: **Cellular Component**
Term	Definition
GO:0016020	membrane

Vocabulary: **Molecular Function**
Term	Definition
GO:0016760	cellulose synthase (UDP-forming) activity

Vocabulary: **Biological Process**
Term	Definition
GO:0030244	cellulose biosynthetic process

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0030244	cellulose biosynthetic process
biological_process	GO:0005982	starch metabolic process
biological_process	GO:0005985	sucrose metabolic process
biological_process	GO:0006011	UDP-glucose metabolic process
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0016020	membrane
molecular_function	GO:0016760	cellulose synthase (UDP-forming) activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh16G005300.1	CmaCh16G005300.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005150	Cellulose synthase	PFAM	PF03552	Cellulose_synt	coord: 113..201 score: 1.7
None	No IPR available	PANTHER	PTHR13301	X-BOX TRANSCRIPTION FACTOR-RELATED	coord: 16..206 score: 2.3E
None	No IPR available	PANTHER	PTHR13301:SF51	CELLULOSE SYNTHASE-LIKE PROTEIN G1-RELATED	coord: 16..206 score: 2.3E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh16G005300	Cucsa.114790	Cucumber (Gy14) v1	cgycmaB0278
CmaCh16G005300	Cla012821	Watermelon (97103) v1	cmawmB314
CmaCh16G005300	Csa4G053270	Cucumber (Chinese Long) v2	cmacuB337
CmaCh16G005300	MELO3C016267	Melon (DHL92) v3.5.1	cmameB301
CmaCh16G005300	CmoCh16G005790	Cucurbita moschata (Rifu)	cmacmoB322
CmaCh16G005300	Lsi07G007360	Bottle gourd (USVL1VR-Ls)	cmalsiB325
CmaCh16G005300	MELO3C016263.2	Melon (DHL92) v3.6.1	cmamedB350
CmaCh16G005300	Cla97C07G138160	Watermelon (97103) v2	cmawmbB350

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh16G005300	Cucumber (Chinese Long) v3	cmacucB0393
CmaCh16G005300	Wax gourd	cmawgoB0437
CmaCh16G005300	Cucurbita maxima (Rimu)	cmacmaB350
CmaCh16G005300	Cucurbita moschata (Rifu)	cmacmoB337
CmaCh16G005300	Wild cucumber (PI 183967)	cmacpiB342
CmaCh16G005300	Watermelon (Charleston Gray)	cmawcgB300
CmaCh16G005300	Cucurbita pepo (Zucchini)	cmacpeB344
CmaCh16G005300	Cucumber (Gy14) v2	cgybcmaB498
CmaCh16G005300	Silver-seed gourd	carcmaB0924