CmaCh16G004710 (gene) Cucurbita maxima (Rimu)
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDS Hold the cursor over a type above to highlight its positions in the sequence below.GATTGCATAAATCCCAACTCGAAGAAAATGAAAATTATTGTAACCCCACAATAAAATTTGAAAGAAAAGTAATACCCAAAAGGAGAGAACCCATTTTTGTTTGGGGCCTTGGGCGTTTTGGGTTCAGCGGCGAGCACCGATGATATGTGCGCGCAGTTGAGGTATAAATTGGGGTTTCTTTGCAGGTCTTTGGTGGGGTTTCTTGATCGATCGGTTTCAAGAGCAATGGGCTGCTTCTTCGATTGCTTCAAAGTCAGAGACGATCGCCATCGACCTAGAGCGCACCTTGTTTCCGATCCTTCTTGTTCGAAGTACAGGGTACGTTTTCGATCCTCGTTTCACCTTCTTGTTTATATTTCGTAATTCCTCCGTTTTGCTCAAGAGTAATTTAGGGAAGTGAAATCTAATGGGAAATTTGCTCCCCTGTTTCTTGGGAAGAATCTGTCCTGTTTTTTGTATCATGGGTGTCGTCCTCTTCCATTCTGCTGCTGTTCTTGCGACTTATGTTGTTTAGCTCAGCTGGATTGCCTGAATTATGTAGCTGATTTGGCTTTGATTGGAGTTAAATTAGATGCTCCAAGTGCTAGATTCTACTCTTCTTTGTATGTCTCTTTGATTGGTGTTTGCCAGTTTTTTACTTCACTTTCTATTTCATGCTTCAGGCACCTGTGGTTGCTCGAAATAAGTTATCATCTCTTTTCCTGTCTGAAGGTAGATGTTCGACTCCTCCATGCTTGTTCCTTGCATTTGAATCTGCAGATTCTTACTTCCTTTTGTGTTTTTTTGTTTTATTAAAGAAAATGAAGATTTCTCGAGGAATGATTCAGGTTCCAAGTCTTTTGGGTCTCCACGGTACACCAAGGAGTTGAAGGATGAGGTATGCAACCTTCCCAATAGTGTTCAGCTCCAAGTATAGTGTGTGCTGGTTTTTATGATTGCTGGTATGTGCATGACTTCAGTTTGATGGTTGGAATATAATTAGTTAGGGAAATGAAAGGCATGAGCTAGAATGAGCTTCTCTGTGTTCAAGTTGCAATGGAACATAATGTTTCAAAGCTCTAGTCTGTTGAAGGTTCCTTAGTTCTACTTCCTTTTCTTGTAAATGCTAAGACTGTTATGATCAGATCCCACAGTAGCACGAAACATTCTTTACAAGGGTTGGAAACTTCTCCCTAGCAGACACGTTTTAAAAATCTTGAGGCAAAATCCAAATTTGCTAGCGGTGGACTTGGTCCGTTACAAATAGCATCAGAGATAGATACCGTGCGATATGCTAGCGAGGAGGCTGAGCTCCGAAGGGGGGTGGAGGACACGAGGTGGTGTGTTAGCAAGGATGTTGGGACTCGAAGGGGTGGATTGGGGGGTCCCATATCGATTGGAGAAGGGAACGAGTGTCAACATCCACACTGGACCCCAAAAGGGGTGGATTGTGAGATCCCACATCAGCTAGAGAGGAAAATGAAACATTTTTTTATGAGCGTGTAGAAACCTCCCCTCAAAGGAAAGTGCTGGTAAAGCCCAAAGAGGACAATATCTACCGGCAGTCGGCTTGGGCTGTTACAGTTCTTCTATTCCTCTTGGGCCTTAATCTTGTCTCTAACTAGGATTATACATGTTAATAAACATCTTTACTACACTTAAACATTAATCCGTTGATATGGGCATTAATTTGCAGGCCAAATTCCTCAAGGCGTGTGGGACTATAGTGGAGACCCCAGCTGAAATCCGGAAAGCATCAAGAAAGCTCTTGGGTTCTCCTCATGATGACAGAGATTTGGAGCCTCATAATTACCCATCACTTCCAAATGCATCCCTTGAAACACCTCCGGATCCTCCCCGCACACCTGCCAAACATTTGGAAGAGGGGAGAAGCGAGCCAGGTTCTGCTGAACGTACACCTAGCAGGTTGTAGTATATATGTGAAACACCCTATACTTGAACATTCAAATTCCTTAGCATTGTCATCTCATAACTGTTATGGAGCTTGTTGATACTGCAGTTGTACTACCAGTGAACAGAATACTCAAATTGTCTCTGCTCTTAATAGTCCTGATCATGTGATGACAACATGTCAGAATAAAGTAAACCAATCTCCCAGCCGAAGTTCATCTGAAAGCGGAAGAGAAGAACTTGATTCATCGGGTAAGTCATCACCTAATCCAACCCCACGACAGCTATCTGACAAAATTCAAACACCTGGAACTGTTTTTCCAGCAAACTTGGATCATGGAACAGCAAGAATCAGGTGTCAGTATGTTTATTCAGGTATGAACCCAGTTGAGAGTGAATCTAATCTGGAAGGACTTTCAAGAGAAGTGAAAGAGTCTGTTCAAGAGCTTGAAATGATGACACCTATACCAGAAAGGACTGTGAGAGCTAATACTCATGAGAAGGAGTTGGTGGTGGAAGCAAGCTTGTCTGCTTGGTTGAAACCAGTAGCTACTCATGATGATGATGGTCTGAAATTTGGAGGTGCACATAGGGCGATTCGTGTTGGAAGGAGTGCAGGGGACAGGCCAATTATAGGGATGGTTGCTGCTCACTGGAGCGAGGATGAACCTGTTCAAATCTCACCCAAGGAATGGGATGGAAATGGAATCCCAAATTCAACCAATAAGTACAAGGAGGTAATTTTATGTCTGTTTTTTGAGATTTTCCTTTTTGTATGAACTTGAATGGTCTGTTACAGATTGGTATCCTGTTTGCAGGATCAGAAAGTGAGTTGGCATGCGACACCATTTGAGGAGAGGCTCGAGAAGGCACTGTCAGAAGAAAGCATAGTTACAAGGTAATGCCTACTCTGTCTTGCTGTCTTCCATGTCTTTTTCTCAAATAGAGTCTAACAAGGTCAGGTAACGGTTCAAGCCCATCGCTAGTAGATATAGTCCTTTTGGGGCTTTTCTTTTTGGGCTTCCCCTCAAGGTTTTTAAAACACATCTGCCAATGAGAGGTTTCCACACCCTTATAAATAACGTTTCATTCTCCTCCACAACCGAGGTGGGATCTCACAATCCACCCCCTTCGAGACCCAGCGTCCTCGTTGGCATTCGTTCCCTTCTCCAATCGATGTGGGACCCTCCAATCCCCCCCCCCCCCCCCCCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCCCCCCCCCCCCCCCCTTGTGGTCGCTGGCACACGTTTTGTGTCCACTCCCTTTCGTGGCTCAGCCCATCGTTAGCAGATACTGTTCTCTTCGGGTTTTTCTCTTCAGGCTTCCCCTCAAGGTTCTTAAAACACGTCTGATAGGGAGAGGTTTCTACACCCTTATAAAAAATATTTCGTTCTCCCCCAACCGATATGGGATCTCACATTCCCCCATCTTATGCAGGAAGAATTTCCAAGGAAAGCTAGTAGCTTTTGATGAGGAAGATGATACAGCAGTTTCGAGGGTTCAACCTGCAATCCAACCCAGTTCAGTGGTATCGTACTGATAAAACTAGTACCTTCTGTTGCGACGGTGTGA GATTGCATAAATCCCAACTCGAAGAAAATGAAAATTATTGTAACCCCACAATAAAATTTGAAAGAAAAGTAATACCCAAAAGGAGAGAACCCATTTTTGTTTGGGGCCTTGGGCGTTTTGGGTTCAGCGGCGAGCACCGATGATATGTGCGCGCAGTTGAGGTATAAATTGGGGTTTCTTTGCAGGTCTTTGGTGGGGTTTCTTGATCGATCGGTTTCAAGAGCAATGGGCTGCTTCTTCGATTGCTTCAAAGTCAGAGACGATCGCCATCGACCTAGAGCGCACCTTGTTTCCGATCCTTCTTGTTCGAAGTACAGGGCACCTGTGGTTGCTCGAAATAAGTTATCATCTCTTTTCCTGTCTGAAGAAAATGAAGATTTCTCGAGGAATGATTCAGGTTCCAAGTCTTTTGGGTCTCCACGGTACACCAAGGAGTTGAAGGATGAGGCCAAATTCCTCAAGGCGTGTGGGACTATAGTGGAGACCCCAGCTGAAATCCGGAAAGCATCAAGAAAGCTCTTGGGTTCTCCTCATGATGACAGAGATTTGGAGCCTCATAATTACCCATCACTTCCAAATGCATCCCTTGAAACACCTCCGGATCCTCCCCGCACACCTGCCAAACATTTGGAAGAGGGGAGAAGCGAGCCAGGTTCTGCTGAACGTACACCTAGCAGTTGTACTACCAGTGAACAGAATACTCAAATTGTCTCTGCTCTTAATAGTCCTGATCATGTGATGACAACATGTCAGAATAAAGTAAACCAATCTCCCAGCCGAAGTTCATCTGAAAGCGGAAGAGAAGAACTTGATTCATCGGGTAAGTCATCACCTAATCCAACCCCACGACAGCTATCTGACAAAATTCAAACACCTGGAACTGTTTTTCCAGCAAACTTGGATCATGGAACAGCAAGAATCAGGTGTCAGTATGTTTATTCAGGTATGAACCCAGTTGAGAGTGAATCTAATCTGGAAGGACTTTCAAGAGAAGTGAAAGAGTCTGTTCAAGAGCTTGAAATGATGACACCTATACCAGAAAGGACTGTGAGAGCTAATACTCATGAGAAGGAGTTGGTGGTGGAAGCAAGCTTGTCTGCTTGGTTGAAACCAGTAGCTACTCATGATGATGATGGTCTGAAATTTGGAGGTGCACATAGGGCGATTCGTGTTGGAAGGAGTGCAGGGGACAGGCCAATTATAGGGATGGTTGCTGCTCACTGGAGCGAGGATGAACCTGTTCAAATCTCACCCAAGGAATGGGATGGAAATGGAATCCCAAATTCAACCAATAAGTACAAGGAGGATCAGAAAGTGAGTTGGCATGCGACACCATTTGAGGAGAGGCTCGAGAAGGCACTGTCAGAAGAAAGCATAGTTACAAGCAGTTTCGAGGGTTCAACCTGCAATCCAACCCAGTTCAGTGGTATCGTACTGATAAAACTAGTACCTTCTGTTGCGACGGTGTGA ATGTGCGCGCAGTTGAGGTATAAATTGGGGTTTCTTTGCAGGTCTTTGGTGGGGTTTCTTGATCGATCGGTTTCAAGAGCAATGGGCTGCTTCTTCGATTGCTTCAAAGTCAGAGACGATCGCCATCGACCTAGAGCGCACCTTGTTTCCGATCCTTCTTGTTCGAAGTACAGGGCACCTGTGGTTGCTCGAAATAAGTTATCATCTCTTTTCCTGTCTGAAGAAAATGAAGATTTCTCGAGGAATGATTCAGGTTCCAAGTCTTTTGGGTCTCCACGGTACACCAAGGAGTTGAAGGATGAGGCCAAATTCCTCAAGGCGTGTGGGACTATAGTGGAGACCCCAGCTGAAATCCGGAAAGCATCAAGAAAGCTCTTGGGTTCTCCTCATGATGACAGAGATTTGGAGCCTCATAATTACCCATCACTTCCAAATGCATCCCTTGAAACACCTCCGGATCCTCCCCGCACACCTGCCAAACATTTGGAAGAGGGGAGAAGCGAGCCAGGTTCTGCTGAACGTACACCTAGCAGTTGTACTACCAGTGAACAGAATACTCAAATTGTCTCTGCTCTTAATAGTCCTGATCATGTGATGACAACATGTCAGAATAAAGTAAACCAATCTCCCAGCCGAAGTTCATCTGAAAGCGGAAGAGAAGAACTTGATTCATCGGGTAAGTCATCACCTAATCCAACCCCACGACAGCTATCTGACAAAATTCAAACACCTGGAACTGTTTTTCCAGCAAACTTGGATCATGGAACAGCAAGAATCAGGTGTCAGTATGTTTATTCAGGTATGAACCCAGTTGAGAGTGAATCTAATCTGGAAGGACTTTCAAGAGAAGTGAAAGAGTCTGTTCAAGAGCTTGAAATGATGACACCTATACCAGAAAGGACTGTGAGAGCTAATACTCATGAGAAGGAGTTGGTGGTGGAAGCAAGCTTGTCTGCTTGGTTGAAACCAGTAGCTACTCATGATGATGATGGTCTGAAATTTGGAGGTGCACATAGGGCGATTCGTGTTGGAAGGAGTGCAGGGGACAGGCCAATTATAGGGATGGTTGCTGCTCACTGGAGCGAGGATGAACCTGTTCAAATCTCACCCAAGGAATGGGATGGAAATGGAATCCCAAATTCAACCAATAAGTACAAGGAGGATCAGAAAGTGAGTTGGCATGCGACACCATTTGAGGAGAGGCTCGAGAAGGCACTGTCAGAAGAAAGCATAGTTACAAGCAGTTTCGAGGGTTCAACCTGCAATCCAACCCAGTTCAGTGGTATCGTACTGATAAAACTAGTACCTTCTGTTGCGACGGTGTGA MCAQLRYKLGFLCRSLVGFLDRSVSRAMGCFFDCFKVRDDRHRPRAHLVSDPSCSKYRAPVVARNKLSSLFLSEENEDFSRNDSGSKSFGSPRYTKELKDEAKFLKACGTIVETPAEIRKASRKLLGSPHDDRDLEPHNYPSLPNASLETPPDPPRTPAKHLEEGRSEPGSAERTPSSCTTSEQNTQIVSALNSPDHVMTTCQNKVNQSPSRSSSESGREELDSSGKSSPNPTPRQLSDKIQTPGTVFPANLDHGTARIRCQYVYSGMNPVESESNLEGLSREVKESVQELEMMTPIPERTVRANTHEKELVVEASLSAWLKPVATHDDDGLKFGGAHRAIRVGRSAGDRPIIGMVAAHWSEDEPVQISPKEWDGNGIPNSTNKYKEDQKVSWHATPFEERLEKALSEESIVTSSFEGSTCNPTQFSGIVLIKLVPSVATV
BLAST of CmaCh16G004710 vs. Swiss-Prot
Match: JASON_ARATH (Protein JASON OS=Arabidopsis thaliana GN=JASON PE=2 SV=1) HSP 1 Score: 247.3 bits (630), Expect = 3.2e-64 Identity = 190/440 (43.18%), Postives = 244/440 (55.45%), Query Frame = 1
BLAST of CmaCh16G004710 vs. TrEMBL
Match: A0A0A0L089_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G063990 PE=4 SV=1) HSP 1 Score: 552.4 bits (1422), Expect = 5.1e-154 Identity = 303/444 (68.24%), Postives = 341/444 (76.80%), Query Frame = 1
BLAST of CmaCh16G004710 vs. TrEMBL
Match: V4VD94_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10031282mg PE=4 SV=1) HSP 1 Score: 345.9 bits (886), Expect = 7.3e-92 Identity = 227/471 (48.20%), Postives = 278/471 (59.02%), Query Frame = 1
BLAST of CmaCh16G004710 vs. TrEMBL
Match: W9R0Q8_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_013298 PE=4 SV=1) HSP 1 Score: 342.0 bits (876), Expect = 1.0e-90 Identity = 231/464 (49.78%), Postives = 281/464 (60.56%), Query Frame = 1
BLAST of CmaCh16G004710 vs. TrEMBL
Match: A0A061DKZ1_THECC (Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, putative isoform 1 OS=Theobroma cacao GN=TCM_001947 PE=4 SV=1) HSP 1 Score: 331.6 bits (849), Expect = 1.4e-87 Identity = 217/455 (47.69%), Postives = 267/455 (58.68%), Query Frame = 1
BLAST of CmaCh16G004710 vs. TrEMBL
Match: A0A061DSZ7_THECC (Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, putative isoform 2 (Fragment) OS=Theobroma cacao GN=TCM_001947 PE=4 SV=1) HSP 1 Score: 330.5 bits (846), Expect = 3.2e-87 Identity = 216/453 (47.68%), Postives = 266/453 (58.72%), Query Frame = 1
BLAST of CmaCh16G004710 vs. TAIR10
Match: AT1G06660.1 (AT1G06660.1 unknown protein) HSP 1 Score: 247.3 bits (630), Expect = 1.8e-65 Identity = 190/440 (43.18%), Postives = 244/440 (55.45%), Query Frame = 1
BLAST of CmaCh16G004710 vs. TAIR10
Match: AT2G30820.1 (AT2G30820.1 unknown protein) HSP 1 Score: 211.1 bits (536), Expect = 1.4e-54 Identity = 160/420 (38.10%), Postives = 220/420 (52.38%), Query Frame = 1
BLAST of CmaCh16G004710 vs. TAIR10
Match: AT1G04030.1 (AT1G04030.1 unknown protein) HSP 1 Score: 61.6 bits (148), Expect = 1.4e-09 Identity = 28/63 (44.44%), Postives = 39/63 (61.90%), Query Frame = 1
BLAST of CmaCh16G004710 vs. NCBI nr
Match: gi|659101859|ref|XP_008451829.1| (PREDICTED: uncharacterized protein LOC103492999 [Cucumis melo]) HSP 1 Score: 566.6 bits (1459), Expect = 3.8e-158 Identity = 311/456 (68.20%), Postives = 350/456 (76.75%), Query Frame = 1
BLAST of CmaCh16G004710 vs. NCBI nr
Match: gi|449460030|ref|XP_004147749.1| (PREDICTED: uncharacterized protein LOC101215061 [Cucumis sativus]) HSP 1 Score: 552.4 bits (1422), Expect = 7.3e-154 Identity = 303/444 (68.24%), Postives = 341/444 (76.80%), Query Frame = 1
BLAST of CmaCh16G004710 vs. NCBI nr
Match: gi|645246917|ref|XP_008229580.1| (PREDICTED: uncharacterized protein LOC103328936 [Prunus mume]) HSP 1 Score: 367.1 bits (941), Expect = 4.4e-98 Identity = 232/465 (49.89%), Postives = 285/465 (61.29%), Query Frame = 1
BLAST of CmaCh16G004710 vs. NCBI nr
Match: gi|657976582|ref|XP_008380178.1| (PREDICTED: uncharacterized protein LOC103443161 isoform X1 [Malus domestica]) HSP 1 Score: 361.3 bits (926), Expect = 2.4e-96 Identity = 226/471 (47.98%), Postives = 279/471 (59.24%), Query Frame = 1
BLAST of CmaCh16G004710 vs. NCBI nr
Match: gi|694331867|ref|XP_009356595.1| (PREDICTED: uncharacterized protein LOC103947410 isoform X1 [Pyrus x bretschneideri]) HSP 1 Score: 358.6 bits (919), Expect = 1.6e-95 Identity = 224/471 (47.56%), Postives = 285/471 (60.51%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene: None |