CmaCh16G004380 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh16G004380
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	Pathogen-related protein
Location	Cma_Chr16 : 2183610 .. 2185242 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TAAAACCTCATAAGTGGCCACTATGAATCTCCACCATTGACTCCTAGTTTGGTGGAAGAAGGAAACTAAACAATGGAAGGCATTAACAACATCACTAAGGGAACCTCCATAGGAACCCATGGTGTTCTTCCCGACAAGTTCAGAGCTAACCTGCATTTGGAGGCTCCCACTGTTCAATGGAGGTATGGGAAGCCTCCTACTTATGAATCTGCCAACAAGCTCTTTGAAGAGGGCCAATCCAAGGTTTTTTTTCCTTTTCTCTTTTGTAAAAAAAAAAAAAAAGAGTTATCTTTCAAATCTCGTGTGTAATTTAAGTTGTTTTTGTTTATGATTAGGTGTGGCCAAAAGGATCTCTGGAAGAAACAGTGCAAAATGCTGTGAAATCATGGCAAGTGGAGATTAACAACAAGGCTAGATTACAAGATTTCAAGACCATAAACACTGAAAAATTCAAGTTTTTTGTCAATGGTAAACAGTGTTTTTTGATGAAGGATTTGCCCACTGGAACGATTAGGTCAAAACTGACTACTAATAACAAAGTTTATCCTAAATTGATACCACAAAATTTACCCTTTTGATATGCAGGAAGAGAGGGGCTGTCAGGAGAAGAAGTGCTGGGGGACGGAAGCTTCAATGCATTGCTGAAGAGTTCTCTACCAGATGAGCATAAGTTTTACAAAGCAGAGGAAGAGACTCATGAATCTGCTCATAATGACTTCAAAACATGTTTTCCAAGAGGGTTTGCATGGGAAGTCATAGAGGTTTATTCTCCTCCTCCTTTGATTGCCTACAAGTTTAGGCATTGGGGTTTCTTTGAAGGTCCTTACAAATCCTATTCCCCTACTGGTGAAATGGTTCAATTCTATGGCATGGGAGTTCTCAAGGTAAAGTCGACATTTATTGAAGTTTTTGTATCAAACATATCTCTATACATGTTTAATGTTAGGCTCACGAGTATTCGTGAATCATCAAATAATTGTTGGGTTATGGAATTTACTATATGGGTAAAAGGTTATTATATCCGATAAAACGGTTGAATAAACAAGAGTCTTTGTAGATGAAAGGCACAAAGTTGTTGTTATAGGGAATAGTGACGTTTTTATTAGCTTTTATTATTTCAGTTTTAGAATCACGTGAATGCTTTAGTCAATATTTCTCTTTGCATTTTCTCTCTCTTGTTCCCGTCTAGATCGAATGTGTGCGATGTTGTGCGATCCTAACAACAGTGACGTGATTCTCTTCCTTTTTATTTTTTTACCCGCCTCATTACTTTGCCAATGATATGATATTTGGACAGGTAGATTCATCAATGAAGGTTGAAGAAGCTCATTTTTACTTTGATCCAGCTGAGCTATTTGGAAGTCTTTTAAAGGGCAAAAAAACTGCTGCTTCATTTATTATCTCTGGCTGCCCATTCTCTGATGCCCAGAAGTAGTTCAAAAGAACACAAAAATGATGGTCGTTTTATCTTTATATTAAGAATAAAGAACTTTGCAACAATATCCATTTGCTTAGCTCAGCTGTTTCTTAGCAGTTCTTACGTTGTTATGTTTGTTAATTGTACCCTTTTCTGTCGGTTGGTTGGTTCTTATTAAATATGAATAATAGTAAGTTGTTTATTAACGGGAAATCA

mRNA sequence

TAAAACCTCATAAGTGGCCACTATGAATCTCCACCATTGACTCCTAGTTTGGTGGAAGAAGGAAACTAAACAATGGAAGGCATTAACAACATCACTAAGGGAACCTCCATAGGAACCCATGGTGTTCTTCCCGACAAGTTCAGAGCTAACCTGCATTTGGAGGCTCCCACTGTTCAATGGAGGTATGGGAAGCCTCCTACTTATGAATCTGCCAACAAGCTCTTTGAAGAGGGCCAATCCAAGGTGTGGCCAAAAGGATCTCTGGAAGAAACAGTGCAAAATGCTGTGAAATCATGGCAAGTGGAGATTAACAACAAGGCTAGATTACAAGATTTCAAGACCATAAACACTGAAAAATTCAAGTTTTTTGTCAATGGAAGAGAGGGGCTGTCAGGAGAAGAAGTGCTGGGGGACGGAAGCTTCAATGCATTGCTGAAGAGTTCTCTACCAGATGAGCATAAGTTTTACAAAGCAGAGGAAGAGACTCATGAATCTGCTCATAATGACTTCAAAACATGTTTTCCAAGAGGGTTTGCATGGGAAGTCATAGAGGTTTATTCTCCTCCTCCTTTGATTGCCTACAAGTTTAGGCATTGGGGTTTCTTTGAAGGTCCTTACAAATCCTATTCCCCTACTGGTGAAATGGTTCAATTCTATGGCATGGGAGTTCTCAAGGTAGATTCATCAATGAAGGTTGAAGAAGCTCATTTTTACTTTGATCCAGCTGAGCTATTTGGAAGTCTTTTAAAGGGCAAAAAAACTGCTGCTTCATTTATTATCTCTGGCTGCCCATTCTCTGATGCCCAGAAGTAGTTCAAAAGAACACAAAAATGATGGTCGTTTTATCTTTATATTAAGAATAAAGAACTTTGCAACAATATCCATTTGCTTAGCTCAGCTGTTTCTTAGCAGTTCTTACGTTGTTATGTTTGTTAATTGTACCCTTTTCTGTCGGTTGGTTGGTTCTTATTAAATATGAATAATAGTAAGTTGTTTATTAACGGGAAATCA

Coding sequence (CDS)

ATGGAAGGCATTAACAACATCACTAAGGGAACCTCCATAGGAACCCATGGTGTTCTTCCCGACAAGTTCAGAGCTAACCTGCATTTGGAGGCTCCCACTGTTCAATGGAGGTATGGGAAGCCTCCTACTTATGAATCTGCCAACAAGCTCTTTGAAGAGGGCCAATCCAAGGTGTGGCCAAAAGGATCTCTGGAAGAAACAGTGCAAAATGCTGTGAAATCATGGCAAGTGGAGATTAACAACAAGGCTAGATTACAAGATTTCAAGACCATAAACACTGAAAAATTCAAGTTTTTTGTCAATGGAAGAGAGGGGCTGTCAGGAGAAGAAGTGCTGGGGGACGGAAGCTTCAATGCATTGCTGAAGAGTTCTCTACCAGATGAGCATAAGTTTTACAAAGCAGAGGAAGAGACTCATGAATCTGCTCATAATGACTTCAAAACATGTTTTCCAAGAGGGTTTGCATGGGAAGTCATAGAGGTTTATTCTCCTCCTCCTTTGATTGCCTACAAGTTTAGGCATTGGGGTTTCTTTGAAGGTCCTTACAAATCCTATTCCCCTACTGGTGAAATGGTTCAATTCTATGGCATGGGAGTTCTCAAGGTAGATTCATCAATGAAGGTTGAAGAAGCTCATTTTTACTTTGATCCAGCTGAGCTATTTGGAAGTCTTTTAAAGGGCAAAAAAACTGCTGCTTCATTTATTATCTCTGGCTGCCCATTCTCTGATGCCCAGAAGTAG

Protein sequence

MEGINNITKGTSIGTHGVLPDKFRANLHLEAPTVQWRYGKPPTYESANKLFEEGQSKVWPKGSLEETVQNAVKSWQVEINNKARLQDFKTINTEKFKFFVNGREGLSGEEVLGDGSFNALLKSSLPDEHKFYKAEEETHESAHNDFKTCFPRGFAWEVIEVYSPPPLIAYKFRHWGFFEGPYKSYSPTGEMVQFYGMGVLKVDSSMKVEEAHFYFDPAELFGSLLKGKKTAASFIISGCPFSDAQK

Homology

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BLAST of CmaCh16G004380 vs. Swiss-Prot
Match: PRPX_HORVU (Pathogen-related protein OS=Hordeum vulgare PE=2 SV=2)

HSP 1 Score: 206.8 bits (525), Expect = 2.6e-52
Identity = 105/224 (46.88%), Postives = 146/224 (65.18%), Query Frame = 1


Query: 21  DKFRANLHL--EAPTVQWRYGKPPTYESANKLFEEGQSKVWPKGSLEETVQNAVKSWQVE 80
           DK+R+ LH   E  TV WR+G PP Y+  NKLFEE ++K W +GS+EE VQ  +K+W++E
Sbjct: 9   DKYRSFLHGDGEKKTV-WRHGAPPNYDLVNKLFEEERTKEWAEGSVEEKVQRLLKTWEME 68

Query: 81  INNKARLQDFKTINTEKFKFFVNGREGLSGEEVLGDGSFNALLKSSLPDEHKFYKAEEET 140
           + +K R +D K++N + +    NG + L+ EEV+  G +NA L ++LP EH+ Y  E E+
Sbjct: 69  MVHKVRPEDQKSVNLKNYSASTNGLKPLTREEVMAMGGYNAFLATTLPPEHRIYDPEAES 128

Query: 141 HESAHNDFKTCFPRGFAWEVIEVYSPP--PLIAYKFRHWGFFEGPYKSYSPTGEMVQFYG 200
            ESA + F T FPRGFA EV++VYS P  P IA+KFRHWG+ EGP+K + P G  V+F+G
Sbjct: 129 VESATSTFLTAFPRGFAIEVLDVYSSPSAPRIAFKFRHWGYMEGPFKGHPPHGGRVEFFG 188

Query: 201 MGVLKVDSSMKVEEAHFYFDPAELFGSLLKGKKTAASFIISGCP 241
           + V  VD   KVE+A F+++      S L     AAS   SGCP
Sbjct: 189 VCVFHVDEDTKVEKAEFFYERGNFLASFLTA--PAASASASGCP 229

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BLAST of CmaCh16G004380 vs. TrEMBL
Match: A0A0A0KYW6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G082440 PE=4 SV=1)

HSP 1 Score: 378.6 bits (971), Expect = 5.6e-102
Identity = 178/235 (75.74%), Postives = 200/235 (85.11%), Query Frame = 1


Query: 21  DKFRANLHLEAPTVQWRYGKPPTYESANKLFEEGQSKVWPKGSLEETVQNAVKSWQVEIN 80
           D+FR +LHLE P+V+WRYGKPPTY SAN+LFE+G++K WP+GSLEETVQNAVKSWQ+EIN
Sbjct: 20  DRFRKSLHLEHPSVEWRYGKPPTYASANQLFEQGRTKEWPEGSLEETVQNAVKSWQMEIN 79

Query: 81  NKARLQDFKTINTEKFKFFVNGREGLSGEEVLGDGSFNALLKSSLPDEHKFYKAEEETHE 140
           NKARLQDF TIN  KFK FVNGREGL+GEEVL  GSFNA+LKSSLP E +FYKAEEETHE
Sbjct: 80  NKARLQDFNTINPHKFKLFVNGREGLAGEEVLRIGSFNAMLKSSLPKEFQFYKAEEETHE 139

Query: 141 SAHNDFKTCFPRGFAWEVIEVYSPPPLIAYKFRHWGFFEGPYKSYSPTGEMVQFYGMGVL 200
           SAHNDFKTCFPRGFAWEVIEVYSPPPLIA+KFRHWGFFEGPYKSYSPTGE+VQFYGM  L
Sbjct: 140 SAHNDFKTCFPRGFAWEVIEVYSPPPLIAFKFRHWGFFEGPYKSYSPTGELVQFYGMATL 199

Query: 201 KVDSSMKVEEAHFYFDPAELFGSLLKGKKT---------AASFIISGCPFSDAQK 247
           KVDSSMKVEE H ++DP ELFG +LKGKK+         + S   S CP  + +K
Sbjct: 200 KVDSSMKVEEVHIFYDPTELFGGILKGKKSIMDSELSKISDSSSASACPLFNTKK 254

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BLAST of CmaCh16G004380 vs. TrEMBL
Match: K7NBX2_SIRGR (Pathogen-related protein OS=Siraitia grosvenorii PE=2 SV=1)

HSP 1 Score: 352.4 bits (903), Expect = 4.3e-94
Identity = 169/257 (65.76%), Postives = 200/257 (77.82%), Query Frame = 1


Query: 2   EGINNITKGTSIGTHGVLPDKFRANLHLEAPTVQWRYGKPPTYESANKLFEEGQSKVWPK 61
           E I   T+G S GT  +LPDK+R++LHLE PTV WR+GKPPTY S N+LFEEG++K W K
Sbjct: 30  ESIKMSTEGGSRGT--ILPDKYRSSLHLEHPTVHWRHGKPPTYHSVNQLFEEGRTKEWAK 89

Query: 62  GSLEETVQNAVKSWQVEINNKARLQDFKTINTEKFKFFVNGREGLSGEEVLGDGSFNALL 121
           GSLEETVQNAVK WQ+E NNKARLQDFKTIN EKFK  VNGREGLSGEE +  GSFNALL
Sbjct: 90  GSLEETVQNAVKLWQMEFNNKARLQDFKTINHEKFKIHVNGREGLSGEETVKLGSFNALL 149

Query: 122 KSSLPDEHKFYKAEEETHESAHNDFKTCFPRGFAWEVIEVYSPPPLIAYKFRHWGFFEGP 181
           KSSLP+E +F+KAE+ET ES+H DF +CFPRGF WEVI+VYS PPLI +KFRHWGFFEGP
Sbjct: 150 KSSLPEEFQFFKAEKETFESSHADFGSCFPRGFPWEVIQVYSGPPLIIFKFRHWGFFEGP 209

Query: 182 YKSYSPTGEMVQFYGMGVLKVDSSMKVEEAHFYFDPAELFGSLLKGKKTAASFIIS---- 241
           YK + PTGE++QF+G+ +LKVD S++VEE   Y+DPAELFG LLKGKKT +         
Sbjct: 210 YKGHQPTGELIQFFGLVILKVDESLRVEEVEIYYDPAELFGKLLKGKKTDSESKTKTKDN 269

Query: 242 --------GCPFSDAQK 247
                   GCPF++  K
Sbjct: 270 EKDEAPSVGCPFTEHNK 284

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BLAST of CmaCh16G004380 vs. TrEMBL
Match: A0A0A0KVJ6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G082450 PE=4 SV=1)

HSP 1 Score: 342.8 bits (878), Expect = 3.4e-91
Identity = 158/225 (70.22%), Postives = 189/225 (84.00%), Query Frame = 1


Query: 8   TKGTSIGTHGVLPDKFRANLHLEAPTVQWRYGKPPTYESANKLFEEGQSKVWPKGSLEET 67
           T+GTS      LPDK+R  LHLE P++ WR+GKPPTY   N+LFEEG++K WPKGSLEE 
Sbjct: 3   TEGTSTTILPDLPDKYRVFLHLEPPSISWRHGKPPTYGIVNQLFEEGRTKEWPKGSLEEI 62

Query: 68  VQNAVKSWQVEINNKARLQDFKTINTEKFKFFVNGREGLSGEEVLGDGSFNALLKSSLPD 127
           VQNAVKSW++E+++K +LQDF TIN  KFK FVNGREGLSGEE L  GS+NA LKS LP+
Sbjct: 63  VQNAVKSWEMELSHKIKLQDFNTINPHKFKLFVNGREGLSGEETLRIGSYNAFLKSPLPE 122

Query: 128 EHKFYKAEEETHESAHNDFKTCFPRGFAWEVIEVYSPPPLIAYKFRHWGFFEGPYKSYSP 187
           E ++YKAEEET ES+H+ F++CFPRGFAWEVIEVYSPPPLIA+KFRHWGFFEGP+KS+SP
Sbjct: 123 EFQYYKAEEETFESSHDAFRSCFPRGFAWEVIEVYSPPPLIAFKFRHWGFFEGPFKSHSP 182

Query: 188 TGEMVQFYGMGVLKVDSSMKVEEAHFYFDPAELFGSLLKGKKTAA 233
           TGE+VQF G+  LKVD S++VEEA  Y+DPAELFG LLKGK TA+
Sbjct: 183 TGELVQFSGLATLKVDESLRVEEAEVYYDPAELFGGLLKGKITAS 227

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BLAST of CmaCh16G004380 vs. TrEMBL
Match: V4T653_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10021966mg PE=4 SV=1)

HSP 1 Score: 325.1 bits (832), Expect = 7.4e-86
Identity = 146/222 (65.77%), Postives = 180/222 (81.08%), Query Frame = 1


Query: 21  DKFRANLHLEAPTVQWRYGKPPTYESANKLFEEGQSKVWPKGSLEETVQNAVKSWQVEIN 80
           DK+R+ LH EA  +QWR+GKPPTY++ N+LFEEG++K WPKGSLEETVQNA+KSW++E+ 
Sbjct: 16  DKYRSFLHDEAEKIQWRHGKPPTYDTVNQLFEEGRTKEWPKGSLEETVQNAIKSWEMELT 75

Query: 81  NKARLQDFKTINTEKFKFFVNGREGLSGEEVLGDGSFNALLKSSLPDEHKFYKAEEETHE 140
           +K RLQD K+IN +KFK  VNGREGLS EE L  GS+NALLK+SLP+E KFYKAEEE+ E
Sbjct: 76  HKTRLQDVKSINPDKFKLIVNGREGLSAEETLKAGSYNALLKNSLPEEFKFYKAEEESFE 135

Query: 141 SAHNDFKTCFPRGFAWEVIEVYSPPPLIAYKFRHWGFFEGPYKSYSPTGEMVQFYGMGVL 200
           S+H  F++ FPRGFAWEV+ VYS PPLIA+KFRHWGFFEGP+K ++PTGE V+F G+G L
Sbjct: 136 SSHEAFRSAFPRGFAWEVLSVYSGPPLIAFKFRHWGFFEGPFKGHAPTGEKVEFCGLGTL 195

Query: 201 KVDSSMKVEEAHFYFDPAELFGSLLKGKKTAASFIISGCPFS 243
           KVD S++ E+   Y+DPAELFG LLKG     S    GCPFS
Sbjct: 196 KVDESLRAEDVEIYYDPAELFGGLLKGSSIEDSTAAQGCPFS 237

[Close]

BLAST of CmaCh16G004380 vs. TrEMBL
Match: I3S1A8_LOTJA (Uncharacterized protein OS=Lotus japonicus PE=2 SV=1)

HSP 1 Score: 319.3 bits (817), Expect = 4.1e-84
Identity = 146/227 (64.32%), Postives = 180/227 (79.30%), Query Frame = 1


Query: 18  VLPDKFRANLHLEAPTVQWRYGKPPTYESANKLFEEGQSKVWPKGSLEETVQNAVKSWQV 77
           V  DK+R+ +H E+ T  WR+G PPTY+  N LFE+G++K WPKGSLEETVQNA+KSW++
Sbjct: 11  VAGDKYRSFIHEESDTTHWRHGGPPTYDVVNHLFEQGRTKEWPKGSLEETVQNAIKSWEM 70

Query: 78  EINNKARLQDFKTINTEKFKFFVNGREGLSGEEVLGDGSFNALLKSSLPDEHKFYKAEEE 137
           E+++K RLQDF+TIN EKFK FVNGREGLS EE L  GS+NALLKSSLP+E K+YK+EEE
Sbjct: 71  EVSHKTRLQDFRTINPEKFKLFVNGREGLSAEETLSIGSYNALLKSSLPEEFKYYKSEEE 130

Query: 138 THESAHNDFKTCFPRGFAWEVIEVYSPPPLIAYKFRHWGFFEGPYKSYSPTGEMVQFYGM 197
           T ES+H  F++ FPRGFAWEVI+VY+ PP IAYKFRHWGFFEGP+K ++PTG+MV+FYG+
Sbjct: 131 TFESSHEAFRSAFPRGFAWEVIKVYTGPPEIAYKFRHWGFFEGPFKGHAPTGKMVEFYGL 190

Query: 198 GVLKVDSSMKVEEAHFYFDPAELFGSLLKGKKTAASFIISGCPFSDA 245
           G LKVD+S+KVEE   Y+DPAEL G LL    TA        P S A
Sbjct: 191 GTLKVDNSLKVEEVEIYYDPAELLGDLLPASGTATEDPTKTTPTSQA 237

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BLAST of CmaCh16G004380 vs. TAIR10
Match: AT1G78780.2 (AT1G78780.2 pathogenesis-related family protein)

HSP 1 Score: 301.2 bits (770), Expect = 5.8e-82
Identity = 137/207 (66.18%), Postives = 171/207 (82.61%), Query Frame = 1


Query: 21  DKFRANLHLEAPTVQWRYGKPPTYESANKLFEEGQSKVWPKGSLEETVQNAVKSWQVEIN 80
           DK+R+ L  +A  VQWRY  PP + S N+LFEEGQ+KVWP+GSLEETVQNA+KSW++E +
Sbjct: 8   DKYRSVLE-DAGQVQWRYDNPPDFNSVNQLFEEGQTKVWPEGSLEETVQNAIKSWEMEFS 67

Query: 81  NKARLQDFKTINTEKFKFFVNGREGLSGEEVLGDGSFNALLKSSLPDEHKFYKAEEETHE 140
           +K RLQDFKTIN EKFK FVNGREGLS EE L  GS+NALLK+SLP+E ++YK EEE+ E
Sbjct: 68  HKIRLQDFKTINPEKFKLFVNGREGLSAEETLRLGSYNALLKNSLPEEFQYYKPEEESFE 127

Query: 141 SAHNDFKTCFPRGFAWEVIEVYSPPPLIAYKFRHWGFFEGPYKSYSPTGEMVQFYGMGVL 200
           S+H+ F++  PRGFAWE++ VYS PP+IA+KFRHWG+FEG +K ++PTGEMVQF G+GVL
Sbjct: 128 SSHDAFRSALPRGFAWEILSVYSGPPVIAFKFRHWGYFEGTFKGHAPTGEMVQFLGLGVL 187

Query: 201 KVDSSMKVEEAHFYFDPAELFGSLLKG 228
           KVD S++ EE   Y+DP ELFG LLKG
Sbjct: 188 KVDESLRAEEIEIYYDPGELFGGLLKG 213

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BLAST of CmaCh16G004380 vs. NCBI nr
Match: gi|449438919|ref|XP_004137235.1| (PREDICTED: pathogen-related protein-like [Cucumis sativus])

HSP 1 Score: 378.6 bits (971), Expect = 8.1e-102
Identity = 178/235 (75.74%), Postives = 200/235 (85.11%), Query Frame = 1


Query: 21  DKFRANLHLEAPTVQWRYGKPPTYESANKLFEEGQSKVWPKGSLEETVQNAVKSWQVEIN 80
           D+FR +LHLE P+V+WRYGKPPTY SAN+LFE+G++K WP+GSLEETVQNAVKSWQ+EIN
Sbjct: 20  DRFRKSLHLEHPSVEWRYGKPPTYASANQLFEQGRTKEWPEGSLEETVQNAVKSWQMEIN 79

Query: 81  NKARLQDFKTINTEKFKFFVNGREGLSGEEVLGDGSFNALLKSSLPDEHKFYKAEEETHE 140
           NKARLQDF TIN  KFK FVNGREGL+GEEVL  GSFNA+LKSSLP E +FYKAEEETHE
Sbjct: 80  NKARLQDFNTINPHKFKLFVNGREGLAGEEVLRIGSFNAMLKSSLPKEFQFYKAEEETHE 139

Query: 141 SAHNDFKTCFPRGFAWEVIEVYSPPPLIAYKFRHWGFFEGPYKSYSPTGEMVQFYGMGVL 200
           SAHNDFKTCFPRGFAWEVIEVYSPPPLIA+KFRHWGFFEGPYKSYSPTGE+VQFYGM  L
Sbjct: 140 SAHNDFKTCFPRGFAWEVIEVYSPPPLIAFKFRHWGFFEGPYKSYSPTGELVQFYGMATL 199

Query: 201 KVDSSMKVEEAHFYFDPAELFGSLLKGKKT---------AASFIISGCPFSDAQK 247
           KVDSSMKVEE H ++DP ELFG +LKGKK+         + S   S CP  + +K
Sbjct: 200 KVDSSMKVEEVHIFYDPTELFGGILKGKKSIMDSELSKISDSSSASACPLFNTKK 254

[Close]

BLAST of CmaCh16G004380 vs. NCBI nr
Match: gi|659101725|ref|XP_008451759.1| (PREDICTED: pathogen-related protein-like [Cucumis melo])

HSP 1 Score: 378.3 bits (970), Expect = 1.1e-101
Identity = 180/235 (76.60%), Postives = 197/235 (83.83%), Query Frame = 1


Query: 21  DKFRANLHLEAPTVQWRYGKPPTYESANKLFEEGQSKVWPKGSLEETVQNAVKSWQVEIN 80
           DKFR +LHLE PTV+WRYGKPP YESAN+LFE+G++K WP+GSLEETVQNAVKSWQ+EIN
Sbjct: 20  DKFRKSLHLEHPTVEWRYGKPPIYESANQLFEQGRTKEWPEGSLEETVQNAVKSWQMEIN 79

Query: 81  NKARLQDFKTINTEKFKFFVNGREGLSGEEVLGDGSFNALLKSSLPDEHKFYKAEEETHE 140
           NKARLQDF TI+  KFK FVNGREGLSGEEVL  GSFN+LLKS+LP E +FYKAEEETHE
Sbjct: 80  NKARLQDFNTIDPHKFKLFVNGREGLSGEEVLRIGSFNSLLKSALPKEFQFYKAEEETHE 139

Query: 141 SAHNDFKTCFPRGFAWEVIEVYSPPPLIAYKFRHWGFFEGPYKSYSPTGEMVQFYGMGVL 200
           SAHNDFKTCFPRGFAWEVIEVYSPPPLIA KFRHWGFFEGPYKSYSPTGE+VQFYGM  L
Sbjct: 140 SAHNDFKTCFPRGFAWEVIEVYSPPPLIALKFRHWGFFEGPYKSYSPTGELVQFYGMATL 199

Query: 201 KVDSSMKVEEAHFYFDPAELFGSLLKGKKT---------AASFIISGCPFSDAQK 247
           KVDS MK EE H Y+DP ELFGS+LKGKK          + S   S CP  D +K
Sbjct: 200 KVDSLMKAEEVHIYYDPTELFGSILKGKKNIMDSELSKISDSSSASACPLFDTKK 254

[Close]

BLAST of CmaCh16G004380 vs. NCBI nr
Match: gi|343466193|gb|AEM42990.1| (pathogen-related protein [Siraitia grosvenorii])

HSP 1 Score: 352.4 bits (903), Expect = 6.2e-94
Identity = 169/257 (65.76%), Postives = 200/257 (77.82%), Query Frame = 1


Query: 2   EGINNITKGTSIGTHGVLPDKFRANLHLEAPTVQWRYGKPPTYESANKLFEEGQSKVWPK 61
           E I   T+G S GT  +LPDK+R++LHLE PTV WR+GKPPTY S N+LFEEG++K W K
Sbjct: 30  ESIKMSTEGGSRGT--ILPDKYRSSLHLEHPTVHWRHGKPPTYHSVNQLFEEGRTKEWAK 89

Query: 62  GSLEETVQNAVKSWQVEINNKARLQDFKTINTEKFKFFVNGREGLSGEEVLGDGSFNALL 121
           GSLEETVQNAVK WQ+E NNKARLQDFKTIN EKFK  VNGREGLSGEE +  GSFNALL
Sbjct: 90  GSLEETVQNAVKLWQMEFNNKARLQDFKTINHEKFKIHVNGREGLSGEETVKLGSFNALL 149

Query: 122 KSSLPDEHKFYKAEEETHESAHNDFKTCFPRGFAWEVIEVYSPPPLIAYKFRHWGFFEGP 181
           KSSLP+E +F+KAE+ET ES+H DF +CFPRGF WEVI+VYS PPLI +KFRHWGFFEGP
Sbjct: 150 KSSLPEEFQFFKAEKETFESSHADFGSCFPRGFPWEVIQVYSGPPLIIFKFRHWGFFEGP 209

Query: 182 YKSYSPTGEMVQFYGMGVLKVDSSMKVEEAHFYFDPAELFGSLLKGKKTAASFIIS---- 241
           YK + PTGE++QF+G+ +LKVD S++VEE   Y+DPAELFG LLKGKKT +         
Sbjct: 210 YKGHQPTGELIQFFGLVILKVDESLRVEEVEIYYDPAELFGKLLKGKKTDSESKTKTKDN 269

Query: 242 --------GCPFSDAQK 247
                   GCPF++  K
Sbjct: 270 EKDEAPSVGCPFTEHNK 284

[Close]

BLAST of CmaCh16G004380 vs. NCBI nr
Match: gi|659101719|ref|XP_008451756.1| (PREDICTED: pathogen-related protein isoform X1 [Cucumis melo])

HSP 1 Score: 346.7 bits (888), Expect = 3.4e-92
Identity = 159/224 (70.98%), Postives = 190/224 (84.82%), Query Frame = 1


Query: 9   KGTSIGTHGVLPDKFRANLHLEAPTVQWRYGKPPTYESANKLFEEGQSKVWPKGSLEETV 68
           +GTS  T   LPDK+R  LHLE P++ WR+GKPPTY   N+LFEEG++K WPKGSLEETV
Sbjct: 4   EGTSTTTLLDLPDKYRVFLHLEPPSISWRHGKPPTYGIVNQLFEEGRTKEWPKGSLEETV 63

Query: 69  QNAVKSWQVEINNKARLQDFKTINTEKFKFFVNGREGLSGEEVLGDGSFNALLKSSLPDE 128
           QNAVKSW++E+++K +LQDF TIN  KFK FVNGREGLSGEE L  GS+NA LKS LP+E
Sbjct: 64  QNAVKSWEMELSHKIKLQDFNTINPRKFKLFVNGREGLSGEETLRIGSYNAFLKSPLPEE 123

Query: 129 HKFYKAEEETHESAHNDFKTCFPRGFAWEVIEVYSPPPLIAYKFRHWGFFEGPYKSYSPT 188
            ++YKAEEET ES+H  F++CFPRGFAWEVIEVYSPPPLIA+KFRHWGFFEGP+KS+SPT
Sbjct: 124 FQYYKAEEETFESSHEAFRSCFPRGFAWEVIEVYSPPPLIAFKFRHWGFFEGPFKSHSPT 183

Query: 189 GEMVQFYGMGVLKVDSSMKVEEAHFYFDPAELFGSLLKGKKTAA 233
           GE+V+FYG+  LKVD ++KVEEA  Y+DPAELFG LLKGK TA+
Sbjct: 184 GELVEFYGLATLKVDEALKVEEAEVYYDPAELFGGLLKGKITAS 227

[Close]

BLAST of CmaCh16G004380 vs. NCBI nr
Match: gi|778691498|ref|XP_011653288.1| (PREDICTED: pathogen-related protein isoform X1 [Cucumis sativus])

HSP 1 Score: 342.8 bits (878), Expect = 4.9e-91
Identity = 158/225 (70.22%), Postives = 189/225 (84.00%), Query Frame = 1


Query: 8   TKGTSIGTHGVLPDKFRANLHLEAPTVQWRYGKPPTYESANKLFEEGQSKVWPKGSLEET 67
           T+GTS      LPDK+R  LHLE P++ WR+GKPPTY   N+LFEEG++K WPKGSLEE 
Sbjct: 3   TEGTSTTILPDLPDKYRVFLHLEPPSISWRHGKPPTYGIVNQLFEEGRTKEWPKGSLEEI 62

Query: 68  VQNAVKSWQVEINNKARLQDFKTINTEKFKFFVNGREGLSGEEVLGDGSFNALLKSSLPD 127
           VQNAVKSW++E+++K +LQDF TIN  KFK FVNGREGLSGEE L  GS+NA LKS LP+
Sbjct: 63  VQNAVKSWEMELSHKIKLQDFNTINPHKFKLFVNGREGLSGEETLRIGSYNAFLKSPLPE 122

Query: 128 EHKFYKAEEETHESAHNDFKTCFPRGFAWEVIEVYSPPPLIAYKFRHWGFFEGPYKSYSP 187
           E ++YKAEEET ES+H+ F++CFPRGFAWEVIEVYSPPPLIA+KFRHWGFFEGP+KS+SP
Sbjct: 123 EFQYYKAEEETFESSHDAFRSCFPRGFAWEVIEVYSPPPLIAFKFRHWGFFEGPFKSHSP 182

Query: 188 TGEMVQFYGMGVLKVDSSMKVEEAHFYFDPAELFGSLLKGKKTAA 233
           TGE+VQF G+  LKVD S++VEEA  Y+DPAELFG LLKGK TA+
Sbjct: 183 TGELVQFSGLATLKVDESLRVEEAEVYYDPAELFGGLLKGKITAS 227

The following BLAST results are available for this feature:

BLAST of CmaCh16G004380 vs. Swiss-Prot


Match Name	E-value	Identity	Description
PRPX_HORVU	2.6e-52	46.88	Pathogen-related protein OS=Hordeum vulgare PE=2 SV=2	[more]

BLAST of CmaCh16G004380 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KYW6_CUCSA	5.6e-102	75.74	Uncharacterized protein OS=Cucumis sativus GN=Csa_4G082440 PE=4 SV=1	[more]
K7NBX2_SIRGR	4.3e-94	65.76	Pathogen-related protein OS=Siraitia grosvenorii PE=2 SV=1	[more]
A0A0A0KVJ6_CUCSA	3.4e-91	70.22	Uncharacterized protein OS=Cucumis sativus GN=Csa_4G082450 PE=4 SV=1	[more]
V4T653_9ROSI	7.4e-86	65.77	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10021966mg PE=4 SV=1	[more]
I3S1A8_LOTJA	4.1e-84	64.32	Uncharacterized protein OS=Lotus japonicus PE=2 SV=1	[more]

BLAST of CmaCh16G004380 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G78780.2	5.8e-82	66.18	pathogenesis-related family protein	[more]

BLAST of CmaCh16G004380 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449438919\|ref\|XP_004137235.1\|	8.1e-102	75.74	PREDICTED: pathogen-related protein-like [Cucumis sativus]	[more]
gi\|659101725\|ref\|XP_008451759.1\|	1.1e-101	76.60	PREDICTED: pathogen-related protein-like [Cucumis melo]	[more]
gi\|343466193\|gb\|AEM42990.1\|	6.2e-94	65.76	pathogen-related protein [Siraitia grosvenorii]	[more]
gi\|659101719\|ref\|XP_008451756.1\|	3.4e-92	70.98	PREDICTED: pathogen-related protein isoform X1 [Cucumis melo]	[more]
gi\|778691498\|ref\|XP_011653288.1\|	4.9e-91	70.22	PREDICTED: pathogen-related protein isoform X1 [Cucumis sativus]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh16G004380.1	CmaCh16G004380.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR31723	FAMILY NOT NAMED	coord: 18..238 score: 8.1E

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh16G004380	Cucurbita pepo (Zucchini)	cmacpeB344
CmaCh16G004380	Cucurbita pepo (Zucchini)	cmacpeB351
CmaCh16G004380	Cucurbita pepo (Zucchini)	cmacpeB353
CmaCh16G004380	Bottle gourd (USVL1VR-Ls)	cmalsiB325
CmaCh16G004380	Bottle gourd (USVL1VR-Ls)	cmalsiB329
CmaCh16G004380	Cucumber (Gy14) v2	cgybcmaB498
CmaCh16G004380	Melon (DHL92) v3.6.1	cmamedB351
CmaCh16G004380	Silver-seed gourd	carcmaB0052
CmaCh16G004380	Silver-seed gourd	carcmaB0053
CmaCh16G004380	Silver-seed gourd	carcmaB0924
CmaCh16G004380	Cucumber (Chinese Long) v3	cmacucB0393
CmaCh16G004380	Watermelon (97103) v2	cmawmbB350
CmaCh16G004380	Wax gourd	cmawgoB0437
CmaCh16G004380	Cucurbita maxima (Rimu)	cmacmaB351
CmaCh16G004380	Cucurbita maxima (Rimu)	cmacmaB353
CmaCh16G004380	Cucumber (Gy14) v1	cgycmaB0759
CmaCh16G004380	Cucurbita moschata (Rifu)	cmacmoB322
CmaCh16G004380	Cucurbita moschata (Rifu)	cmacmoB338
CmaCh16G004380	Cucurbita moschata (Rifu)	cmacmoB340
CmaCh16G004380	Wild cucumber (PI 183967)	cmacpiB342
CmaCh16G004380	Cucumber (Chinese Long) v2	cmacuB337
CmaCh16G004380	Melon (DHL92) v3.5.1	cmameB301
CmaCh16G004380	Watermelon (Charleston Gray)	cmawcgB300
CmaCh16G004380	Watermelon (97103) v1	cmawmB308