CmaCh16G002230 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh16G002230
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	Polycomb group protein embryonic flower 2
Location	Cma_Chr16 : 1013170 .. 1022747 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

TAGCTTATTTCTATCTTCTCTGTCGCTCTTTCTTTTTGCTCGAACAGACACAGGAACAATAGTGACAACTCTGAGCTACTGCAGGTAGGCTTTTACTATCAATGAAACCACGTCGATGTTAAACTTTGAAAAATTCCACTTGTTCTACCCATTTATGCACCTCCATTTATACCTTCAGCTTAATTTTTTATCTGTAAGTTTGATTTTGCTGTTAAAGCGCTTTCTGCCGTGGATTATGAGCTTGTGGAATTGTTTGAGAACTGGGCGTTTCCCCGTATTGTAAAATTGAAGTTCCTACGCCCAAAATGCTTTAGATTCTCCTGTTTTAGTTCTGCACATATTTTTCATCTGAGCTCAAATTTGTGGTCATTATTGGAGAAACAACTATCGGGCTTCGCTTGTTGTTATTGCGCGGCGATACTTTGAATTGGTGTTGAGGCTCTGTCTTTCTTTTTTTTTTTTGTTCGTTTAAAAGGTTGCGGTGTTCTGTTGCTGATGCGTAAAGGGCATGTGTTGGGGCGTCAAGCCTTGTAAGTCCATAGTTGCCATGAGATTGTAATTAGAATTGCTGGAGAAGAATGCCTGGCATACCTCTTGTGGCTCGTGAAACTTCGTATGTGCTATTTATTTCCGCCAGTCTTTTCAACTTGAGCACACTAACCAAACGAAAATGAAGAAAGATTTGTTTGTAGCTTTGATTTTTTTTTTTTTGAAGGATATTATGTCGAGGGATTGTTGGGAGGGAGTCCCACGTTGGCTAATTAATGGGATGATCATGAGTTTATAAGTAAGGAATACTTCTCCATTGGTACGAGGCTTTTTGGGGAAACCAAAAGTAAAGCCATGAGAGCTTATGCTCAAAGTGGACAACATCATACCATTGTGGAGGTCTGTAGTTTCTAACATGGTATTAGAGCCATACCCTTAACTTAGCTGTGTCAATAGAATCCTCGTGTCTAACAAAGAAGTTGTGAACCTCGAAAGTATAGTTAAAAGTGACTAAAGTGTCGAACAAATGGTGTACTTTGTTCGATGGCTCCATAAGGAATTAAGCCTTGATTAAGGGGAGGTTGTTCGAGGGCTCCATATGCCTCCCCATATGCCTCAGGGGAGGCTCTATGGTGTACTTTGTTTGAGGGAAGGATTGTTGAGTATTGTTGGGAGGGAGGTTCCACATTGACTAATTAAAGGGATGATCATGAGTTTATAAGTAGGTTTATAAGTAAGGAATACGTCTCCATTGATATGAGGGCTTTTGAGGAAACCAAAAGCAAAGCCATGAGAGCTTATGCTTAAAACCATCGTGGAAGTCCGTGGTGTCTAACATAATACCATCTTAGAAATATTTCGACTTCTTTGAATCATAAGAGTTGTAAAAGTTAGGAACTTCTTATGGCCGGATGTAACCACGTAGCTTCATAGTTCCTTGCTGGTAGAAACACTAACACATATGGGAGAGCTAGCGTAAGAAGTTATTATGACGTGATTTTGGGAAAATAACTTCAGTGCCTAAGCTTATATGCCTTGGAGAGAAGTGTAAATTTCGTTTTGCATTCCTCCATGATTTCTGATTCTCTACTTTTTAGGTGGCTGCTCTTGTTCTTCTTTCTTCTTGTACCATCTTTTTCACTGATAGCCTATTGGTAATCTTAGTTTCTCTCCCAGCTGTTCCAGAAACGCAGATCAAATGTGTCGTGTAGACTCTCGTGTTCATCTATCTGAAGAAGAGGAAATTGCTGCAGAAGAGAGCCTCTCACTTTACTGCAAGCCAGTTGAACTCTACAACATTCTTCAGCGGCGTGCTATTAAAAATGTAATGCAATGGCTTAGCTATTTTTTTCCTCTCCAAATGGAGTTAATACATGATGAATATAATGAGGCAATACTCATATGAACAACTTGTGATCAATATGAAAAGTTTGGATAGTTTTAAATGGTGATTCCATCTGTCTCATGTTCATTTATCCAGACTAAACTTTTGACTGAAAATAATGTTTAATTGTCATACTTGCTTTGTTTGGCCTATATTGTACTGATCTTTATTTTTTTGTTCATATGTAGCCTTTATTTCTTCACAGATGTTTAAGGTACAAAATAGAGACGAAACACAAGAGAAGGTAATTGGTTTTAATTTTGCTTCTATTTGTCTACAACAACCATCGAAAGAATTAGCACTCATATCAGAAATGGTTAGACTAATATCATTTAGATATCATTTTCGCTATTTTCATGTTTACTGATATTTTTTTTGGTTAAGAGACCTTTCATTACTATGTGAAAATTATAATATAGAGATTGAAAAAAGGAGTTGGATCTTATATCAATGCTTTTTTAAGTGCATGGTGGAGCAGCCCAAGCCTACCGCTAGTAGATATTGTCTGCTTTAGTCCGTTACGTATCGTCGTCAGCCGCAAGATTTTAAAACGCGTCTACCAGGGAGAGGTTTCACACCCTTATAAAGAATGCTTTGTTCCCCTCTCCAACCGATGTGGGATCTCACAATCCCATCCCCCTTGATTGCCTAGCGTCCTCACTGGCACACTGCTCGGTGTCTGGCTCTAATACCATTTGTAGCAGCCCAAGCCTACTGCTAGTAGATATTGTCCGCTTTAGCCCATTAAGTATTGTCGTCAGCATCACGATTTTGAAACACGTCTACTAGGGAGAGGTTTCCACCCCTTATAAGAAATGTTTCATTCCTCACTCCAACTGATGTGGGATCTCACATATAGGAACATTGAGGCACCATTGTCTTTTGAAGTGCATGCACGTGGTGCACAAAAAAAAAAAAGACACGTGTCGTAGTTTGCTGAGGTGCACAACATGTCAAAGAATTGGTGTACTAAAGATTTAATATTATTGTTAGTGAAAGAGGGATTGATTGAATGATTGATAAGATTGATTAAATTTTGAAGAGCAAGAATGCTCTATATATATATATACAAAGAATACAAAGAGATATCTAGAAAATCTACCTAGAAATCAGGAAATCTGGTAACGAACCAGTAAACAAATTAAATCAAAACAAAATCTAATCAAATCAAGAGTAAATCAAATAAAAACAAATCGACTCCTAACTATCAGAAGATTTGACCAAATACAGCAATCTAAACAAACACTAATATTTAACACTCCTCCAGGTTTAGATGCTGCAAACTCCAAGTTTTTTTCTGAAATTTTCAAACTTGCTAAGTGGCAGAGGTTTGGTAAGGACATCTGCAATTTGATCTTCAAATTTGCAATTGCAAAGAGTCACATCACCACTCTTTTGAACTTCTCGAACAAAGAATAACTTGATGTTGAAATGCTTAGTTTTTCCATGAAAAACTGGATTATTAGAGATTGCAATAGCAGCTTGGTTATCAACTAGTATCTCAGTGCTGTGTTTTTGCTCCAAGTTTAGATCCACAAGAATTTTCCTTAACCAGAGAGCTTGATTAACTGCGGCTCTTGCAGCTATCAATTCTGCCTCAGCAGTGGATTGAGCTACAGTTTCTTGCTTTCTTGAGCACCAAGAGAACATGCCTGATCCGAGGCAAACAGTAACCAGATGTACTCTTCATGTCATCGATTGAGCCACCTCAATCACCGTAAGAGAAACCAATTAGCTTCATTTCCTTGTGCTTTAAGAACTTCACTCCATAATTCCAGGTCCCTTGATGTATCTGATAACTCTCTTTGCAGTTTTCATGTGAGTCTCATTGGGACAATGCATAAATCTGGAGAGAATACTTACAACATTTACGATATCAGGTCTGGTTGTTGTTAAGTACATCAGGCACCCTACCAAGCTTCGGAACTCAGCTTCAATAACTTTGGCAGAACCATCATCTTTGACCAGCTTCTCCTTTTAATTCATAGGAGTATTCATTGCTTTGCAATCCTCCATCTGAAACTTTTTAAGTATCTCCTTTGCATACTTTCTTTGACAAATGAACACTTCATCTTGGGTTTGCTTGACCTCAATGCCAAGGAAATATGACATCAGACCAAGGTCTGTCATTTCGAAGATCTTTTTCATTTCCAGTTTGAACTTGTTAATTTGCTTAGGATTGCTTCCTGTAATTAATAAGTCATCTACATAAAGAGAAATGACTAAAGTATTTGTACCTTCATGCTTGACATACAGTGTGAGTTCAGATTGACTTTTCTGAAAGCCAAGACCAACCAAATGATCATTAATTTTACTATACCATGCTCGCGGAGCCTGTTTAGGGTCGTATAAAGCCCTTCTCAGCAAGTAGACTTTATCTTCATTGCCTTTGCTCACAAAACCTTCAGGTTGCTCGACAAAAAATTCTTCTTGCAAGACTCCATTTAAGAACGTAGATTTAACATCTAACTGGAATACTTTCCAACTCTTTTGAGCAGCAATAGCAAGCAACAATCTTACTGTATCAAGTCTAGCAACAGGTGCAAATGTTTCTGAATAGTCAACTCCAAAAACTTGCGCATATCCCTTCACAACAAGTCTTGCTTTGTATTTGTTAACTGAACCATCAGGATTTAGCTTTGTTCTGAATACCTATCTTACTCCAATTATCTTTCTGTTTAGAGGTCGATCAACTAACTTCCATGTTTTGTTTTTCTCGATCATCGAAAGCTCCTCCTGCATTGCAGCCATCCAATGTTGGCTGTTTTTTGCATCATGGAACCCTGCAGGCTCACAAATAGCTACATTACACCTTTGATAAATATTAGACAGTAACCTTGTACCTCTCACAAGTGCATCATCAACCAAATCATCTTGTTGTTCATCTTCAGACTCTTCTTGTCGTTCATCTTCAGATTCTTCTAACATGCTACCAAAGGTTAAATTGTTTGGTGCATTAGAAATCTGATTCACCTTTGTCAGTTCTTCCCAATTCCATTGCTCATTTTTCAGCAAAATGAACTTCTCGGCTCACAATAACCTGACTAGTGTGCGGTTGAAAAACTCTATAAGCTTTGGATATAGTGCTATACCCAACAAATATGCCAGCTTCTGCCTTTTTGTCAAGCTTATCACGCTTGACTTGTGGAATGTAAGTGAAGCAAAGACACCTAAATACTTTAAGGAACTTTAAAGAAGGTATGTAACCATACCAAGCTTCAAATGGTGTCAGGTCCTTCACAGCTTTTGTTGAAATTCGATTTTGCAAGTACACAGCAGTGTTTGCTGCTTCTCCCCAAAAACATTTTGGAAGATCCTTCTCATGAAGCATGCATCTCGTCATCTCCATTATGAATCTATTCCTCCTTTCACTGACGCATTCTGTTGAGGAGTGTATGGTGCTGTCAACTGATGTTCAATTTCAGCCTCTTCACAAAACCTGTTAAAAGTTTCTGAAGTGTACTCCTTGCCATTATCTGATCTTACTGTCTGAATCAAGCATGCACTTTCATTCTCAACTCTGGCCTTGAATTTTCAAAATACACCTCAACTTCTGACTTTTGCTAAGATCCAACACATTCTTGTTAGATCATCAATAAAAATAATGTAATAAAGATTACCATTTAATGATGGTGTTCGTTGAGGACCACAAAGATCAGTATGGACCAGTTGCAGTTTTTTTGAGGCTTTCCATGCCTATTTAGGAAAGGGTTGTCTATGTTGCTTCCCAAAATTACAAGCACGGCAAGGAAGCATGTCATCATTAATGTCAGCGAGTTCTTCTACCAGCTTCTTTGACTGCATCTGAAGTAAACCTCGATGATGAAAGTGCCCAAGTCTTTTGTGCCAAATCTCAGTGGCACTAGCTTTCTCCATCGGATTTAGAGCAAAACTTTTTCCTTTCATTTTGACATTGAACAAGTCTTTGCCACTAGCATCTTTGATCAAACACTGCTTATTCTCAGACAACACTTTATAGCCTTTATCAAGTAACTGACCAACACTTAAAGAGATTTTGATCAATTTTAGGTACAAATAAAACATATGGAATAAATTTTGTACCTTCGTAACTTGTTATAGCTACTGTGCCTTTTCCTTTGACTTCCAAGTGTTCACCATTGCCCATCCTCACTCTCTTGACTTCATTGTCTCTTAATTCCTCAAAAAACTCCTTGTCATATGTCATATGATTTGTGCACCCACTGTCAATCAACCAGCTCTCGCTTGATTCTTTGCCTGAGAAACAAGTGGCCACAAACAATTGATCTTCTTCTTCCTCTTCTTGATCAACTACCTGTGCATCTACTTCTTTCACTTGATCTTTGGCTTTACAAATCACAGCTTCATGTCCAAGTTGATTGCATTTGGAGCAGAAGGCGTCAGGTCTTCTCCAACACTTGTATGGTGGATGACCTTTCTTCTCACAATGACGGCAAGGTGGATAGGATTTTTTGAAATCTCCTCCTTTTGTCTTCTGATAATTTGCAGATGGATCTCTATACGTCGATTGGTTTTTGAAAATTTTCTTGTTTTTATAACTGCTGTTGTCTTGATGCTTAACAGGTAAGGCATCTTCAATCACCCTTTCTTGCCTCATAGATCTCCTTTGCTCTTGTGCTTGTAAAGCATTCAAGAGCTCTGTAAGAGAAATCTTTGACAAGTCTTTGGTGTTCTCCAGAGTAGTAATGGTGGCTTCAAACTTCTCTGGAATAGTGACTAGCAGCTTTTCAACGATCCTGGAATCATTTGTAATCTCACCTTATTGGCAATGCTGAGAAGTCTGTCAGAGTATTCTTTCACCGATTCAGACTCCTTCATCTTCTGCAACTCGAAATCCCTAATCAAATTCAGAACTTTCATTCCACGAATCCTCTCATCTCCTTCATATTTAGCTTTGAGATAATCCCAGATTTCCTTTGCTGTTTCGAGGGACATTATTCGCATGAAGATCATTTGAGATACAACAGCAAATAGGCAAGCTTTCGCCTTTGATTTCCTTGTCTTTTTTTCCTTCTGTAATTTGATTTGTGCTACAGTAGGATTTGCTGGAAGCGGAGGGACCTCGTAATCCTCTTCTATTGCTTCCCAAAGATCCAAGGTCTCCAAATAAGTCTCCATACGAACTGCCCACATTTGATAATTGTCTCCATCGAAGATCGGTGGTGCAACAGCAGAAAAACTGGATTCTCCTTCCATCTTGATCTCACAGATCCCTTAAGAAGATAGCTCTGATACCAATTGTTAGTGAAGGAGGGATTGATTGAATGATTGATAAGATTGATTAAATTTTGAAGAGCAAGAATGCTCTATATATATACAGAGAATACAAAGAGATATCTAGAAAATCTACCTAGAAATCAGGAAATCTGGTAACAAACCAGTAAACAAATTAAATCAAAACAAAATCTAATCAAATCAAGAGTAAATCAAATAAAAACAAATCGACTCCTAACTATCAGAAGATTTAACCAAATACAGCAATCTAAACAAACTAATCTTTAACAATTATGAAGCACGAGACTAAGATAAATTAAAGGAACCAGGAACTTTTTAAGGACTTGTTTAAGTTTTGGCCTTGGTGAGGGGAGGCAATCGTCTGAGCGAGGGTCACAGAAAACGTCTCAAAAAAAAAAAAAAGTCCAAGTATATTGAACTTTTTTGTATGACTAGTTAAAATTTATGTAGCTTATGACATTTCTTTATTTTTTAGAAGAAAATTTCATCGAAGAACCTTGTTGAAATTTCATTTTAGTATGAAGTCTTTCTTGCTACCCTCATTAAATGGTTGTGCTGGTTTTCCATTTGAAGTTCTATGCCTCCATTCTTGGTATTTCTTTCTTGTCGATTACATTTTTTCTCTTTCTTTAATGGTGATCATTTCTATAATTGGATTCTGGAATTTATTATGTACTGAATTTTGAATCTGTTATCTGTAGGATCCAGATGGCAATTTCAATCTCTAGGACAACGAGCGCAGGTGGTCAGACACAGAATTTGTTTCCTATGCATGTCATCTTGGGAAGATTAGTCTCTGACATTTCAGTTGCCGAGGTAAGAATGATTTTGGTTGGTTTCAGCTCTGGTTGATCTTGAATGCAAATTGACTATTAGGGGGTATTCTGCATTTTAAAGAAGGGCTTATTGTGCATCCTAATGTATGTTTTGATATCTAATTATAAGTTTTCTTCATTCCTTTTTTAAACCAATAGTTCTCTGGTGTATATCGCTTCAGTCACGCTTGCCTCTTAAATGGCATCAACAGAGTGGAATGCAATTCTCAAGTTATAGCTAATTTCATCCTCCCTGAAATTAACAAGCTAGCTGCAGAGGCAAAATCTGGGTCACTTGCTATATTATTTGTTAGCTGTGGTAGGCCTTCACACTTAACTTTTACTGGTGGCCGAATTTAGACAACAAAATATGTTATATTTGGTCTATATGCTGTTTCTTGCAGTTGGATTTGCAAATACTTCGTCCGGAGTAGATTCAGTTGATGGGCGTTCATACATGGCATCTGTTCCTGGTACCTTATCCTCCATCGAGCTGGTTCTACTGTGGATTTTTTTTGTCTAATATGATTCGACGTCTTTATTTTGATTTGGCATGTCAAAATATAGTCCATTGTTTGTTGGTAGAGATAAAATTTGGCTTCTTATTGGACTCAAAGTTAAAGTAATTTGGTAATGAGTTATACCAAAAAGAGTATGAGAAAAATGGGATGCTACACTTACGTTTTGAAACTTGTATATTTGACGAGTCTGGTTTTGTTCTAGCTAGATAACGTGACATCAGATAGATGATCGAAGAGTTCTTTCTTCACCCTTCTTTTAGCGAGAAAGGAAAGTTGAAGTAAATAAAAAGTCTTAAAATACATTAATGAAATATCATAATTCTAAATTATTATCCACCCAAAATTTGTAACCATCTAAGAATAAATGAAGCTTGATTCTTCTTTGATGTGACATGAATTGCAACATCTTGTGATAATTTGAACAACATTTTTTCGCATGTTCATTAAAATTTATATGGCTGATTGATGCTGTGGTTCATATCATGTGTTCTGTATAAGGGTTAGGAATGGTTACAATTGCTTATCTTGGAGGTAGCGATTGCAGGTTACTGCTTATGGGGCAAGATACCTCTGGACTTTACATTTAGTGGCAGAATTCTTCAAATTTTGGTCTTGGACAGAGGGCTGAGATAATGTCAACTGTGGATATGCGCTCCTGTGTTGTGAAGGTTTCGGTCAAATGCTTTTTTTTTTCTTTTTTTTTTTCACTAAAAACTATTCTGATGTCATTTCATTACTTTCTTCCTATTTATATTTAGCTGGTGATGAATGTCGAATCTCTTATTTATGATCTCGCCATGATATTAGTTTTTATTTTTGCAGACAAGTTGCTTGGATGGAGAGAAGTGTGTAGGATTTCAAATTCCATATAATTCTGATTCTATGGTCCGTTTTGATGATCTATTTTATTATTTTCTACTTGTGGTATCAAGTATCATTTTTTTCCATCCCCCAGAGTTTCACTTACCTTTGCCTTTCTTGTTCTTTATTTGTTTTTTAATTTTTGGGTCTCAAAAGCATACAGCCAGCAAGTACAGGTCACAATTTCTGCAGAAGAGTTCGGTGCTAGGGGCAAATCTCCATATGATTCATACACGTTCAGTGAAATACCTTCCTCGTCACTATATCATATGA

mRNA sequence

TAGCTTATTTCTATCTTCTCTGTCGCTCTTTCTTTTTGCTCGAACAGACACAGGAACAATAGTGACAACTCTGAGCTACTGCAGGTTGCGGTGTTCTGTTGCTGATGCGTAAAGGGCATGTGTTGGGGCGTCAAGCCTTGTAAGTCCATAGTTGCCATGAGATTGTAATTAGAATTGCTGGAGAAGAATGCCTGGCATACCTCTTGTGGCTCGTGAAACTTCTTTCTCTCCCAGCTGTTCCAGAAACGCAGATCAAATGTGTCGTGTAGACTCTCGTGTTCATCTATCTGAAGAAGAGGAAATTGCTGCAGAAGAGAGCCTCTCACTTTACTGCAAGCCAGTTGAACTCTACAACATTCTTCAGCGGCGTGCTATTAAAAATCCTTTATTTCTTCACAGATGTTTAAGGTACAAAATAGAGACGAAACACAAGAGAAGGATCCAGATGGCAATTTCAATCTCTAGGACAACGAGCGCAGGTGGTCAGACACAGAATTTGTTTCCTATGCATGTCATCTTGGGAAGATTAGTCTCTGACATTTCAGTTGCCGAGTTCTCTGGTGTATATCGCTTCAGTCACGCTTGCCTCTTAAATGGCATCAACAGAGTGGAATGCAATTCTCAAGTTATAGCTAATTTCATCCTCCCTGAAATTAACAAGCTAGCTGCAGAGGCAAAATCTGGGTCACTTGCTATATTATTTGTTAGCTGTGTTGGATTTGCAAATACTTCGTCCGGAGTAGATTCAGTTGATGGGCGTTCATACATGGCATCTGTTCCTGGTACCTTATCCTCCATCGAGCTGTGGCAGAATTCTTCAAATTTTGGTCTTGGACAGAGGGCTGAGATAATGTCAACTGTGGATATGCGCTCCTGTGTTGTGAAGACAAGTTGCTTGGATGGAGAGAAGTGTGTAGGATTTCAAATTCCATATAATTCTGATTCTATGCATACAGCCAGCAAGTACAGGTCACAATTTCTGCAGAAGAGTTCGGTGCTAGGGGCAAATCTCCATATGATTCATACACGTTCAGTGAAATACCTTCCTCGTCACTATATCATATGA

Coding sequence (CDS)

ATGCCTGGCATACCTCTTGTGGCTCGTGAAACTTCTTTCTCTCCCAGCTGTTCCAGAAACGCAGATCAAATGTGTCGTGTAGACTCTCGTGTTCATCTATCTGAAGAAGAGGAAATTGCTGCAGAAGAGAGCCTCTCACTTTACTGCAAGCCAGTTGAACTCTACAACATTCTTCAGCGGCGTGCTATTAAAAATCCTTTATTTCTTCACAGATGTTTAAGGTACAAAATAGAGACGAAACACAAGAGAAGGATCCAGATGGCAATTTCAATCTCTAGGACAACGAGCGCAGGTGGTCAGACACAGAATTTGTTTCCTATGCATGTCATCTTGGGAAGATTAGTCTCTGACATTTCAGTTGCCGAGTTCTCTGGTGTATATCGCTTCAGTCACGCTTGCCTCTTAAATGGCATCAACAGAGTGGAATGCAATTCTCAAGTTATAGCTAATTTCATCCTCCCTGAAATTAACAAGCTAGCTGCAGAGGCAAAATCTGGGTCACTTGCTATATTATTTGTTAGCTGTGTTGGATTTGCAAATACTTCGTCCGGAGTAGATTCAGTTGATGGGCGTTCATACATGGCATCTGTTCCTGGTACCTTATCCTCCATCGAGCTGTGGCAGAATTCTTCAAATTTTGGTCTTGGACAGAGGGCTGAGATAATGTCAACTGTGGATATGCGCTCCTGTGTTGTGAAGACAAGTTGCTTGGATGGAGAGAAGTGTGTAGGATTTCAAATTCCATATAATTCTGATTCTATGCATACAGCCAGCAAGTACAGGTCACAATTTCTGCAGAAGAGTTCGGTGCTAGGGGCAAATCTCCATATGATTCATACACGTTCAGTGAAATACCTTCCTCGTCACTATATCATATGA

Protein sequence

MPGIPLVARETSFSPSCSRNADQMCRVDSRVHLSEEEEIAAEESLSLYCKPVELYNILQRRAIKNPLFLHRCLRYKIETKHKRRIQMAISISRTTSAGGQTQNLFPMHVILGRLVSDISVAEFSGVYRFSHACLLNGINRVECNSQVIANFILPEINKLAAEAKSGSLAILFVSCVGFANTSSGVDSVDGRSYMASVPGTLSSIELWQNSSNFGLGQRAEIMSTVDMRSCVVKTSCLDGEKCVGFQIPYNSDSMHTASKYRSQFLQKSSVLGANLHMIHTRSVKYLPRHYII

Homology

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BLAST of CmaCh16G002230 vs. Swiss-Prot
Match: EMF2_ARATH (Polycomb group protein EMBRYONIC FLOWER 2 OS=Arabidopsis thaliana GN=EMF2 PE=1 SV=2)

HSP 1 Score: 276.6 bits (706), Expect = 3.2e-73
Identity = 146/257 (56.81%), Postives = 180/257 (70.04%), Query Frame = 1


Query: 1   MPGIPLVARETSFSPSCSRNADQMCRVDSRVHLSEEEEIAAEESLSLYCKPVELYNILQR 60
           MPGIPLV+RETS   SCSR+ +QMC  DSR+ +SEEEEIAAEESL+ YCKPVELYNI+QR
Sbjct: 1   MPGIPLVSRETS---SCSRSTEQMCHEDSRLRISEEEEIAAEESLAAYCKPVELYNIIQR 60

Query: 61  RAIKNPLFLHRCLRYKIETKHKRRIQMAISISRTTSAGGQTQNLFPMHVILGRLVSDISV 120
           RAI+NPLFL RCL YKIE KHKRRIQM + +S    AG QTQ LFP++++L RLVS   V
Sbjct: 61  RAIRNPLFLQRCLHYKIEAKHKRRIQMTVFLSGAIDAGVQTQKLFPLYILLARLVSPKPV 120

Query: 121 AEFSGVYRFSHACLLNGINRVECNSQVIANFILPEINKLAAEAKSGSLAILFVSCVGFAN 180
           AE+S VYRFS AC+L G   V+  SQ  ANF+LP++N+LA EAKSGSLAILF+S  G  N
Sbjct: 121 AEYSAVYRFSRACILTGGLGVDGVSQAQANFLLPDMNRLALEAKSGSLAILFISFAGAQN 180

Query: 181 TSSGVDS-------VDGRSYMASVPGTLSSIELWQNSSNFGLGQRAEIMSTVDMRSCVVK 240
           +  G+DS       + G    + +P   S    WQ S N  LGQR + +S V+M+ C +K
Sbjct: 181 SQFGIDSGKIHSGNIGGHCLWSKIP-LQSLYASWQKSPNMDLGQRVDTVSLVEMQPCFIK 240

Query: 241 TSCLDGEKCVGFQIPYN 251
              +  EKCV  Q+P N
Sbjct: 241 LKSMSEEKCVSIQVPSN 253

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BLAST of CmaCh16G002230 vs. Swiss-Prot
Match: VRN2_ARATH (Polycomb group protein VERNALIZATION 2 OS=Arabidopsis thaliana GN=VRN2 PE=1 SV=2)

HSP 1 Score: 68.6 bits (166), Expect = 1.3e-10
Identity = 33/61 (54.10%), Postives = 41/61 (67.21%), Query Frame = 1


Query: 24 MCRVDSRVHLSEEEEIAAEESLSLYCKPVELYNILQRRAIKNPLFLHRCLRYKIETKHKR 83
          MCR + R   S EE I+ +E+L +YCKPV LYNI   R++ NP FL RCL YKI  K KR
Sbjct: 1  MCRQNCRAKSSPEEVISTDENLLIYCKPVRLYNIFHLRSLGNPSFLPRCLNYKIGAKRKR 60

Query: 84 R 85
          +
Sbjct: 61 K 61

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BLAST of CmaCh16G002230 vs. TrEMBL
Match: A0A0A0KZ77_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G024050 PE=4 SV=1)

HSP 1 Score: 431.0 bits (1107), Expect = 1.1e-117
Identity = 226/268 (84.33%), Postives = 237/268 (88.43%), Query Frame = 1


Query: 1   MPGIPLVARETSFSPSCSRNADQMCRVDSRVHLSEEEEIAAEESLSLYCKPVELYNILQR 60
           MPGIPLVARETS    CSRNADQMCRV+SRVHLSEEEEIAAEESL LYCKPVELYNILQR
Sbjct: 1   MPGIPLVARETS----CSRNADQMCRVESRVHLSEEEEIAAEESLLLYCKPVELYNILQR 60

Query: 61  RAIKNPLFLHRCLRYKIETKHKRRIQMAISISRTTSAGGQTQNLFPMHVILGRLVSDISV 120
           RAI+NPLFL RCLRYKIETKHKRRIQM ISISRT+S GGQTQNLFPM+VILGRLVSDI+V
Sbjct: 61  RAIRNPLFLQRCLRYKIETKHKRRIQMTISISRTSSVGGQTQNLFPMYVILGRLVSDIAV 120

Query: 121 AEFSGVYRFSHACLLNGINRVECNSQVIANFILPEINKLAAEAKSGSLAILFVSCVGFAN 180
           AEFSGVYRF+ ACLL GINRVEC+SQVIANFILPEINKLA EAKSGSLAILFVSCVG AN
Sbjct: 121 AEFSGVYRFNRACLLTGINRVECSSQVIANFILPEINKLAVEAKSGSLAILFVSCVGSAN 180

Query: 181 TSSGVDSVDGRSYMASVPGT----------LSSIEL-WQNSSNFGLGQRAEIMSTVDMRS 240
           T SGVDSVDG  YM SVP            L S+ + WQNSSNFGLGQRAEIMS+VDMRS
Sbjct: 181 TLSGVDSVDGPLYMRSVPAVAGYCLWGKIPLESLYISWQNSSNFGLGQRAEIMSSVDMRS 240

Query: 241 CVVKTSCLDGEKCVGFQIPYNSDSMHTA 258
           CVVKTSC+DGEKCVGFQIPYNSDSMHTA
Sbjct: 241 CVVKTSCVDGEKCVGFQIPYNSDSMHTA 264

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BLAST of CmaCh16G002230 vs. TrEMBL
Match: F6I2N5_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_16s0013g00860 PE=4 SV=1)

HSP 1 Score: 286.2 bits (731), Expect = 4.5e-74
Identity = 153/273 (56.04%), Postives = 194/273 (71.06%), Query Frame = 1


Query: 1   MPGIPLVARETSFSPSCSRNADQMCRVDSRVHLSEEEEIAAEESLSLYCKPVELYNILQR 60
           MPGIPLVARET +S    R+ADQMCR DSRVHLS EEEIAAEESLS+YCKPVELYNILQR
Sbjct: 1   MPGIPLVARETIYS----RSADQMCRQDSRVHLSAEEEIAAEESLSIYCKPVELYNILQR 60

Query: 61  RAIKNPLFLHRCLRYKIETKHKRRIQMAISISRTTSAGGQTQNLFPMHVILGRLVSDISV 120
           RA+ NP FL RCLRYKI+ KHKRRIQM IS+  +T  G Q Q+ FP++++L R +SDI++
Sbjct: 61  RAVGNPSFLQRCLRYKIQAKHKRRIQMTISLPGSTYDGVQAQSPFPLYILLARPISDIAL 120

Query: 121 AEFSGVYRFSHACLLNGINRVECNSQVIANFILPEINKLAAEAKSGSLAILFVSCVGFAN 180
           AE+  VYRF+ AC+L    RV+ + Q  ANFILP+I+KLA E+KSGSL IL V C     
Sbjct: 121 AEYPAVYRFNRACILTSSTRVDGSHQAQANFILPDISKLAMESKSGSLTILIVKCAESKE 180

Query: 181 TSSGV----DSVDGRSYMASVPG-------TLSSIEL-WQNSSNFGLGQRAEIMSTVDMR 240
           + SG     D +D   +  +V G        + S+ L W+ S N  LGQRAEI+STVD+ 
Sbjct: 181 SISGFGLPKDIMDMAPFSTNVGGHCLWGKVPMESLYLSWKMSPNLSLGQRAEIISTVDLH 240

Query: 241 SCVVKTSCLDGEKCVGFQIPYNSDSMHTASKYR 262
            C +K+SCLD +KC+ FQ PYNS ++  A +++
Sbjct: 241 PCFMKSSCLDDDKCISFQNPYNSGTLSKAQQFQ 269

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BLAST of CmaCh16G002230 vs. TrEMBL
Match: A0A078ECY9_BRANA (BnaC09g27450D protein OS=Brassica napus GN=BnaC09g27450D PE=4 SV=1)

HSP 1 Score: 277.7 bits (709), Expect = 1.6e-71
Identity = 149/258 (57.75%), Postives = 184/258 (71.32%), Query Frame = 1


Query: 1   MPGIPLVARETSFSPSCSRNADQMCRVDSRVHLSEEEEIAAEESLSLYCKPVELYNILQR 60
           MPGIPLV+ E S   SCSR+ D MC  DSRV +SEEEEIAAEESL  YCKPVELYNILQR
Sbjct: 1   MPGIPLVSPEAS---SCSRSTDSMCHEDSRVLMSEEEEIAAEESLVAYCKPVELYNILQR 60

Query: 61  RAIKNPLFLHRCLRYKIETKHKRRIQMAISISRTTSAGGQTQNLFPMHVILGRLVSDISV 120
           RAI+NPLFL RCL YKIE KHKRRIQM + +S T  AG QTQ LFP++++L RLVS   V
Sbjct: 61  RAIRNPLFLQRCLHYKIEAKHKRRIQMTVFLSGTIDAGVQTQKLFPLYILLARLVSPKPV 120

Query: 121 AEFSGVYRFSHACLLNGINRVECNSQVIANFILPEINKLAAEAKSGSLAILFVSCVGFAN 180
           AE+S VY+FS AC+L G+  V+  SQ  ANF+LP++NKLA EAKSGSLAILF+S  G  N
Sbjct: 121 AEYSAVYKFSRACILTGVVGVDGVSQAQANFLLPDMNKLALEAKSGSLAILFISFAGAQN 180

Query: 181 TSSGVDSVDGRSYMASVPG-------TLSSI-ELWQNSSNFGLGQRAEIMSTVDMRSCVV 240
           +  G+DS  G+ +  +V G       +L S+  LWQ S N  LGQ+ + +S V+M+ C +
Sbjct: 181 SQFGIDS--GKIHSGNVGGHCLWSKVSLQSLYSLWQKSPNMDLGQKVDTVSLVEMQPCFI 240

Query: 241 KTSCLDGEKCVGFQIPYN 251
           K   ++ EKCV  Q+P N
Sbjct: 241 KLKSMNEEKCVSIQVPSN 253

[Close]

BLAST of CmaCh16G002230 vs. TrEMBL
Match: A0A0D2ZR71_BRAOL (Uncharacterized protein OS=Brassica oleracea var. oleracea PE=4 SV=1)

HSP 1 Score: 277.7 bits (709), Expect = 1.6e-71
Identity = 149/258 (57.75%), Postives = 184/258 (71.32%), Query Frame = 1


Query: 1   MPGIPLVARETSFSPSCSRNADQMCRVDSRVHLSEEEEIAAEESLSLYCKPVELYNILQR 60
           MPGIPLV+ E S   SCSR+ D MC  DSRV +SEEEEIAAEESL  YCKPVELYNILQR
Sbjct: 1   MPGIPLVSPEAS---SCSRSTDSMCHEDSRVLMSEEEEIAAEESLVAYCKPVELYNILQR 60

Query: 61  RAIKNPLFLHRCLRYKIETKHKRRIQMAISISRTTSAGGQTQNLFPMHVILGRLVSDISV 120
           RAI+NPLFL RCL YKIE KHKRRIQM + +S T  AG QTQ LFP++++L RLVS   V
Sbjct: 61  RAIRNPLFLQRCLHYKIEAKHKRRIQMTVFLSGTIDAGVQTQKLFPLYILLARLVSPKPV 120

Query: 121 AEFSGVYRFSHACLLNGINRVECNSQVIANFILPEINKLAAEAKSGSLAILFVSCVGFAN 180
           AE+S VY+FS AC+L G+  V+  SQ  ANF+LP++NKLA EAKSGSLAILF+S  G  N
Sbjct: 121 AEYSAVYKFSRACILTGVVGVDGVSQAQANFLLPDMNKLALEAKSGSLAILFISFAGAQN 180

Query: 181 TSSGVDSVDGRSYMASVPG-------TLSSI-ELWQNSSNFGLGQRAEIMSTVDMRSCVV 240
           +  G+DS  G+ +  +V G       +L S+  LWQ S N  LGQ+ + +S V+M+ C +
Sbjct: 181 SQFGIDS--GKIHSGNVGGHCLWSKVSLQSLYSLWQKSPNMDLGQKVDTVSLVEMQPCFI 240

Query: 241 KTSCLDGEKCVGFQIPYN 251
           K   ++ EKCV  Q+P N
Sbjct: 241 KLKSMNEEKCVSIQVPSN 253

[Close]

BLAST of CmaCh16G002230 vs. TrEMBL
Match: I1UYF9_BRAOT (Embryonic flower 2_1 OS=Brassica oleracea var. italica GN=EMF2_1 PE=2 SV=1)

HSP 1 Score: 277.7 bits (709), Expect = 1.6e-71
Identity = 149/258 (57.75%), Postives = 184/258 (71.32%), Query Frame = 1


Query: 1   MPGIPLVARETSFSPSCSRNADQMCRVDSRVHLSEEEEIAAEESLSLYCKPVELYNILQR 60
           MPGIPLV+ E S   SCSR+ D MC  DSRV +SEEEEIAAEESL  YCKPVELYNILQR
Sbjct: 1   MPGIPLVSPEAS---SCSRSTDSMCHEDSRVLMSEEEEIAAEESLVAYCKPVELYNILQR 60

Query: 61  RAIKNPLFLHRCLRYKIETKHKRRIQMAISISRTTSAGGQTQNLFPMHVILGRLVSDISV 120
           RAI+NPLFL RCL YKIE KHKRRIQM + +S T  AG QTQ LFP++++L RLVS   V
Sbjct: 61  RAIRNPLFLQRCLHYKIEAKHKRRIQMTVFLSGTIDAGVQTQKLFPLYILLARLVSPKPV 120

Query: 121 AEFSGVYRFSHACLLNGINRVECNSQVIANFILPEINKLAAEAKSGSLAILFVSCVGFAN 180
           AE+S VY+FS AC+L G+  V+  SQ  ANF+LP++NKLA EAKSGSLAILF+S  G  N
Sbjct: 121 AEYSAVYKFSRACILTGVVGVDGVSQAQANFLLPDMNKLALEAKSGSLAILFISFAGAQN 180

Query: 181 TSSGVDSVDGRSYMASVPG-------TLSSI-ELWQNSSNFGLGQRAEIMSTVDMRSCVV 240
           +  G+DS  G+ +  +V G       +L S+  LWQ S N  LGQ+ + +S V+M+ C +
Sbjct: 181 SQFGIDS--GKIHSGNVGGHCLWSKVSLQSLYSLWQKSPNMDLGQKVDTVSLVEMQPCFI 240

Query: 241 KTSCLDGEKCVGFQIPYN 251
           K   ++ EKCV  Q+P N
Sbjct: 241 KLKSMNEEKCVSIQVPSN 253

[Close]

BLAST of CmaCh16G002230 vs. TAIR10
Match: AT5G51230.1 (AT5G51230.1 VEFS-Box of polycomb protein)

HSP 1 Score: 276.6 bits (706), Expect = 1.8e-74
Identity = 146/257 (56.81%), Postives = 180/257 (70.04%), Query Frame = 1


Query: 1   MPGIPLVARETSFSPSCSRNADQMCRVDSRVHLSEEEEIAAEESLSLYCKPVELYNILQR 60
           MPGIPLV+RETS   SCSR+ +QMC  DSR+ +SEEEEIAAEESL+ YCKPVELYNI+QR
Sbjct: 1   MPGIPLVSRETS---SCSRSTEQMCHEDSRLRISEEEEIAAEESLAAYCKPVELYNIIQR 60

Query: 61  RAIKNPLFLHRCLRYKIETKHKRRIQMAISISRTTSAGGQTQNLFPMHVILGRLVSDISV 120
           RAI+NPLFL RCL YKIE KHKRRIQM + +S    AG QTQ LFP++++L RLVS   V
Sbjct: 61  RAIRNPLFLQRCLHYKIEAKHKRRIQMTVFLSGAIDAGVQTQKLFPLYILLARLVSPKPV 120

Query: 121 AEFSGVYRFSHACLLNGINRVECNSQVIANFILPEINKLAAEAKSGSLAILFVSCVGFAN 180
           AE+S VYRFS AC+L G   V+  SQ  ANF+LP++N+LA EAKSGSLAILF+S  G  N
Sbjct: 121 AEYSAVYRFSRACILTGGLGVDGVSQAQANFLLPDMNRLALEAKSGSLAILFISFAGAQN 180

Query: 181 TSSGVDS-------VDGRSYMASVPGTLSSIELWQNSSNFGLGQRAEIMSTVDMRSCVVK 240
           +  G+DS       + G    + +P   S    WQ S N  LGQR + +S V+M+ C +K
Sbjct: 181 SQFGIDSGKIHSGNIGGHCLWSKIP-LQSLYASWQKSPNMDLGQRVDTVSLVEMQPCFIK 240

Query: 241 TSCLDGEKCVGFQIPYN 251
              +  EKCV  Q+P N
Sbjct: 241 LKSMSEEKCVSIQVPSN 253

[Close]

BLAST of CmaCh16G002230 vs. TAIR10
Match: AT4G16845.1 (AT4G16845.1 VEFS-Box of polycomb protein)

HSP 1 Score: 68.6 bits (166), Expect = 7.5e-12
Identity = 33/61 (54.10%), Postives = 41/61 (67.21%), Query Frame = 1


Query: 24 MCRVDSRVHLSEEEEIAAEESLSLYCKPVELYNILQRRAIKNPLFLHRCLRYKIETKHKR 83
          MCR + R   S EE I+ +E+L +YCKPV LYNI   R++ NP FL RCL YKI  K KR
Sbjct: 1  MCRQNCRAKSSPEEVISTDENLLIYCKPVRLYNIFHLRSLGNPSFLPRCLNYKIGAKRKR 60

Query: 84 R 85
          +
Sbjct: 61 K 61

[Close]

BLAST of CmaCh16G002230 vs. NCBI nr
Match: gi|778690276|ref|XP_011653092.1| (PREDICTED: polycomb group protein EMBRYONIC FLOWER 2 isoform X5 [Cucumis sativus])

HSP 1 Score: 435.6 bits (1119), Expect = 6.6e-119
Identity = 227/269 (84.39%), Postives = 238/269 (88.48%), Query Frame = 1


Query: 1   MPGIPLVARETSFSPSCSRNADQMCRVDSRVHLSEEEEIAAEESLSLYCKPVELYNILQR 60
           MPGIPLVARETS    CSRNADQMCRV+SRVHLSEEEEIAAEESL LYCKPVELYNILQR
Sbjct: 1   MPGIPLVARETS----CSRNADQMCRVESRVHLSEEEEIAAEESLLLYCKPVELYNILQR 60

Query: 61  RAIKNPLFLHRCLRYKIETKHKRRIQMAISISRTTSAGGQTQNLFPMHVILGRLVSDISV 120
           RAI+NPLFL RCLRYKIETKHKRRIQM ISISRT+S GGQTQNLFPM+VILGRLVSDI+V
Sbjct: 61  RAIRNPLFLQRCLRYKIETKHKRRIQMTISISRTSSVGGQTQNLFPMYVILGRLVSDIAV 120

Query: 121 AEFSGVYRFSHACLLNGINRVECNSQVIANFILPEINKLAAEAKSGSLAILFVSCVGFAN 180
           AEFSGVYRF+ ACLL GINRVEC+SQVIANFILPEINKLA EAKSGSLAILFVSCVG AN
Sbjct: 121 AEFSGVYRFNRACLLTGINRVECSSQVIANFILPEINKLAVEAKSGSLAILFVSCVGSAN 180

Query: 181 TSSGVDSVDGRSYMASVPGTLSSIEL------------WQNSSNFGLGQRAEIMSTVDMR 240
           T SGVDSVDG  YM SVPGT++   L            WQNSSNFGLGQRAEIMS+VDMR
Sbjct: 181 TLSGVDSVDGPLYMRSVPGTVAGYCLWGKIPLESLYISWQNSSNFGLGQRAEIMSSVDMR 240

Query: 241 SCVVKTSCLDGEKCVGFQIPYNSDSMHTA 258
           SCVVKTSC+DGEKCVGFQIPYNSDSMHTA
Sbjct: 241 SCVVKTSCVDGEKCVGFQIPYNSDSMHTA 265

[Close]

BLAST of CmaCh16G002230 vs. NCBI nr
Match: gi|659107794|ref|XP_008453862.1| (PREDICTED: polycomb group protein EMBRYONIC FLOWER 2 isoform X5 [Cucumis melo])

HSP 1 Score: 432.2 bits (1110), Expect = 7.3e-118
Identity = 226/269 (84.01%), Postives = 237/269 (88.10%), Query Frame = 1


Query: 1   MPGIPLVARETSFSPSCSRNADQMCRVDSRVHLSEEEEIAAEESLSLYCKPVELYNILQR 60
           MPGIPLVARETS    CSRNADQMCRV+SRVHLSEEEEIAAEESL LYCKPVELYNILQ 
Sbjct: 1   MPGIPLVARETS----CSRNADQMCRVESRVHLSEEEEIAAEESLLLYCKPVELYNILQC 60

Query: 61  RAIKNPLFLHRCLRYKIETKHKRRIQMAISISRTTSAGGQTQNLFPMHVILGRLVSDISV 120
           RAI+NPLFL RCLRYKIETKHKRRIQM ISISRT+S GGQTQ+LFPM+VILGRLVSDI+V
Sbjct: 61  RAIRNPLFLQRCLRYKIETKHKRRIQMTISISRTSSVGGQTQSLFPMYVILGRLVSDIAV 120

Query: 121 AEFSGVYRFSHACLLNGINRVECNSQVIANFILPEINKLAAEAKSGSLAILFVSCVGFAN 180
           AEFSGVYRF+ ACLL GINRVEC+SQVIANFILPEINKLA EAKSGSLAILFVSCVG AN
Sbjct: 121 AEFSGVYRFNRACLLTGINRVECSSQVIANFILPEINKLAVEAKSGSLAILFVSCVGSAN 180

Query: 181 TSSGVDSVDGRSYMASVPGTLSSIEL------------WQNSSNFGLGQRAEIMSTVDMR 240
           T SGVDSVDG  YM SVPGT++   L            WQNSSNFGLGQRAEIMSTVDMR
Sbjct: 181 TLSGVDSVDGPLYMRSVPGTVAGYCLWGKIPLESLYISWQNSSNFGLGQRAEIMSTVDMR 240

Query: 241 SCVVKTSCLDGEKCVGFQIPYNSDSMHTA 258
           SCVVKTSC+DGEKCVGFQIPYNSDSMHTA
Sbjct: 241 SCVVKTSCVDGEKCVGFQIPYNSDSMHTA 265

[Close]

BLAST of CmaCh16G002230 vs. NCBI nr
Match: gi|700198013|gb|KGN53171.1| (hypothetical protein Csa_4G024050 [Cucumis sativus])

HSP 1 Score: 431.0 bits (1107), Expect = 1.6e-117
Identity = 226/268 (84.33%), Postives = 237/268 (88.43%), Query Frame = 1


Query: 1   MPGIPLVARETSFSPSCSRNADQMCRVDSRVHLSEEEEIAAEESLSLYCKPVELYNILQR 60
           MPGIPLVARETS    CSRNADQMCRV+SRVHLSEEEEIAAEESL LYCKPVELYNILQR
Sbjct: 1   MPGIPLVARETS----CSRNADQMCRVESRVHLSEEEEIAAEESLLLYCKPVELYNILQR 60

Query: 61  RAIKNPLFLHRCLRYKIETKHKRRIQMAISISRTTSAGGQTQNLFPMHVILGRLVSDISV 120
           RAI+NPLFL RCLRYKIETKHKRRIQM ISISRT+S GGQTQNLFPM+VILGRLVSDI+V
Sbjct: 61  RAIRNPLFLQRCLRYKIETKHKRRIQMTISISRTSSVGGQTQNLFPMYVILGRLVSDIAV 120

Query: 121 AEFSGVYRFSHACLLNGINRVECNSQVIANFILPEINKLAAEAKSGSLAILFVSCVGFAN 180
           AEFSGVYRF+ ACLL GINRVEC+SQVIANFILPEINKLA EAKSGSLAILFVSCVG AN
Sbjct: 121 AEFSGVYRFNRACLLTGINRVECSSQVIANFILPEINKLAVEAKSGSLAILFVSCVGSAN 180

Query: 181 TSSGVDSVDGRSYMASVPGT----------LSSIEL-WQNSSNFGLGQRAEIMSTVDMRS 240
           T SGVDSVDG  YM SVP            L S+ + WQNSSNFGLGQRAEIMS+VDMRS
Sbjct: 181 TLSGVDSVDGPLYMRSVPAVAGYCLWGKIPLESLYISWQNSSNFGLGQRAEIMSSVDMRS 240

Query: 241 CVVKTSCLDGEKCVGFQIPYNSDSMHTA 258
           CVVKTSC+DGEKCVGFQIPYNSDSMHTA
Sbjct: 241 CVVKTSCVDGEKCVGFQIPYNSDSMHTA 264

[Close]

BLAST of CmaCh16G002230 vs. NCBI nr
Match: gi|778690282|ref|XP_011653093.1| (PREDICTED: polycomb group protein EMBRYONIC FLOWER 2 isoform X6 [Cucumis sativus])

HSP 1 Score: 427.9 bits (1099), Expect = 1.4e-116
Identity = 224/269 (83.27%), Postives = 235/269 (87.36%), Query Frame = 1


Query: 1   MPGIPLVARETSFSPSCSRNADQMCRVDSRVHLSEEEEIAAEESLSLYCKPVELYNILQR 60
           MPGIPLVARETS       NADQMCRV+SRVHLSEEEEIAAEESL LYCKPVELYNILQR
Sbjct: 1   MPGIPLVARETS-------NADQMCRVESRVHLSEEEEIAAEESLLLYCKPVELYNILQR 60

Query: 61  RAIKNPLFLHRCLRYKIETKHKRRIQMAISISRTTSAGGQTQNLFPMHVILGRLVSDISV 120
           RAI+NPLFL RCLRYKIETKHKRRIQM ISISRT+S GGQTQNLFPM+VILGRLVSDI+V
Sbjct: 61  RAIRNPLFLQRCLRYKIETKHKRRIQMTISISRTSSVGGQTQNLFPMYVILGRLVSDIAV 120

Query: 121 AEFSGVYRFSHACLLNGINRVECNSQVIANFILPEINKLAAEAKSGSLAILFVSCVGFAN 180
           AEFSGVYRF+ ACLL GINRVEC+SQVIANFILPEINKLA EAKSGSLAILFVSCVG AN
Sbjct: 121 AEFSGVYRFNRACLLTGINRVECSSQVIANFILPEINKLAVEAKSGSLAILFVSCVGSAN 180

Query: 181 TSSGVDSVDGRSYMASVPGTLSSIEL------------WQNSSNFGLGQRAEIMSTVDMR 240
           T SGVDSVDG  YM SVPGT++   L            WQNSSNFGLGQRAEIMS+VDMR
Sbjct: 181 TLSGVDSVDGPLYMRSVPGTVAGYCLWGKIPLESLYISWQNSSNFGLGQRAEIMSSVDMR 240

Query: 241 SCVVKTSCLDGEKCVGFQIPYNSDSMHTA 258
           SCVVKTSC+DGEKCVGFQIPYNSDSMHTA
Sbjct: 241 SCVVKTSCVDGEKCVGFQIPYNSDSMHTA 262

[Close]

BLAST of CmaCh16G002230 vs. NCBI nr
Match: gi|778690288|ref|XP_011653094.1| (PREDICTED: polycomb group protein EMBRYONIC FLOWER 2 isoform X7 [Cucumis sativus])

HSP 1 Score: 426.4 bits (1095), Expect = 4.0e-116
Identity = 224/265 (84.53%), Postives = 235/265 (88.68%), Query Frame = 1


Query: 1   MPGIPLVARETSFSPSCSRNADQMCRVDSRVHLSEEEEIAAEESLSLYCKPVELYNILQR 60
           MPGIPLVARETS       NADQMCRV+SRVHLSEEEEIAAEESL LYCKPVELYNILQR
Sbjct: 1   MPGIPLVARETS-------NADQMCRVESRVHLSEEEEIAAEESLLLYCKPVELYNILQR 60

Query: 61  RAIKNPLFLHRCLRYKIETKHKRRIQMAISISRTTSAGGQTQNLFPMHVILGRLVSDISV 120
           RAI+NPLFL RCLRYKIETKHKRRIQM ISISRT+S GGQTQNLFPM+VILGRLVSDI+V
Sbjct: 61  RAIRNPLFLQRCLRYKIETKHKRRIQMTISISRTSSVGGQTQNLFPMYVILGRLVSDIAV 120

Query: 121 AEFSGVYRFSHACLLNGINRVECNSQVIANFILPEINKLAAEAKSGSLAILFVSCVGFAN 180
           AEFSGVYRF+ ACLL GINRVEC+SQVIANFILPEINKLA EAKSGSLAILFVSCVG AN
Sbjct: 121 AEFSGVYRFNRACLLTGINRVECSSQVIANFILPEINKLAVEAKSGSLAILFVSCVGSAN 180

Query: 181 TSSGVDSVDGRSYMASVPG-------TLSSIEL-WQNSSNFGLGQRAEIMSTVDMRSCVV 240
           T SGVDSVDG  YM SVPG        L S+ + WQNSSNFGLGQRAEIMS+VDMRSCVV
Sbjct: 181 TLSGVDSVDGPLYMRSVPGYCLWGKIPLESLYISWQNSSNFGLGQRAEIMSSVDMRSCVV 240

Query: 241 KTSCLDGEKCVGFQIPYNSDSMHTA 258
           KTSC+DGEKCVGFQIPYNSDSMHTA
Sbjct: 241 KTSCVDGEKCVGFQIPYNSDSMHTA 258

The following BLAST results are available for this feature:

BLAST of CmaCh16G002230 vs. Swiss-Prot


Match Name	E-value	Identity	Description
EMF2_ARATH	3.2e-73	56.81	Polycomb group protein EMBRYONIC FLOWER 2 OS=Arabidopsis thaliana GN=EMF2 PE=1 S...	[more]
VRN2_ARATH	1.3e-10	54.10	Polycomb group protein VERNALIZATION 2 OS=Arabidopsis thaliana GN=VRN2 PE=1 SV=2	[more]

BLAST of CmaCh16G002230 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KZ77_CUCSA	1.1e-117	84.33	Uncharacterized protein OS=Cucumis sativus GN=Csa_4G024050 PE=4 SV=1	[more]
F6I2N5_VITVI	4.5e-74	56.04	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_16s0013g00860 PE=4 SV=...	[more]
A0A078ECY9_BRANA	1.6e-71	57.75	BnaC09g27450D protein OS=Brassica napus GN=BnaC09g27450D PE=4 SV=1	[more]
A0A0D2ZR71_BRAOL	1.6e-71	57.75	Uncharacterized protein OS=Brassica oleracea var. oleracea PE=4 SV=1	[more]
I1UYF9_BRAOT	1.6e-71	57.75	Embryonic flower 2_1 OS=Brassica oleracea var. italica GN=EMF2_1 PE=2 SV=1	[more]

BLAST of CmaCh16G002230 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G51230.1	1.8e-74	56.81	VEFS-Box of polycomb protein	[more]
AT4G16845.1	7.5e-12	54.10	VEFS-Box of polycomb protein	[more]

BLAST of CmaCh16G002230 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778690276\|ref\|XP_011653092.1\|	6.6e-119	84.39	PREDICTED: polycomb group protein EMBRYONIC FLOWER 2 isoform X5 [Cucumis sativus...	[more]
gi\|659107794\|ref\|XP_008453862.1\|	7.3e-118	84.01	PREDICTED: polycomb group protein EMBRYONIC FLOWER 2 isoform X5 [Cucumis melo]	[more]
gi\|700198013\|gb\|KGN53171.1\|	1.6e-117	84.33	hypothetical protein Csa_4G024050 [Cucumis sativus]	[more]
gi\|778690282\|ref\|XP_011653093.1\|	1.4e-116	83.27	PREDICTED: polycomb group protein EMBRYONIC FLOWER 2 isoform X6 [Cucumis sativus...	[more]
gi\|778690288\|ref\|XP_011653094.1\|	4.0e-116	84.53	PREDICTED: polycomb group protein EMBRYONIC FLOWER 2 isoform X7 [Cucumis sativus...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh16G002230.1	CmaCh16G002230.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR22597	POLYCOMB GROUP PROTEIN	coord: 16..251 score: 1.4
None	No IPR available	PANTHER	PTHR22597:SF0	POLYCOMB PROTEIN SUZ12	coord: 16..251 score: 1.4

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh16G002230	CmoCh04G003830	Cucurbita moschata (Rifu)	cmacmoB338

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh16G002230	Cucumber (Chinese Long) v3	cmacucB0387
CmaCh16G002230	Cucumber (Chinese Long) v3	cmacucB0405
CmaCh16G002230	Watermelon (97103) v2	cmawmbB329
CmaCh16G002230	Watermelon (97103) v2	cmawmbB352
CmaCh16G002230	Wax gourd	cmawgoB0410
CmaCh16G002230	Wax gourd	cmawgoB0440
CmaCh16G002230	Cucurbita maxima (Rimu)	cmacmaB351
CmaCh16G002230	Cucumber (Gy14) v1	cgycmaB0196
CmaCh16G002230	Cucurbita moschata (Rifu)	cmacmoB322
CmaCh16G002230	Wild cucumber (PI 183967)	cmacpiB337
CmaCh16G002230	Cucumber (Chinese Long) v2	cmacuB332
CmaCh16G002230	Melon (DHL92) v3.5.1	cmameB304
CmaCh16G002230	Watermelon (Charleston Gray)	cmawcgB302
CmaCh16G002230	Watermelon (97103) v1	cmawmB313
CmaCh16G002230	Cucurbita pepo (Zucchini)	cmacpeB344
CmaCh16G002230	Cucurbita pepo (Zucchini)	cmacpeB351
CmaCh16G002230	Bottle gourd (USVL1VR-Ls)	cmalsiB301
CmaCh16G002230	Bottle gourd (USVL1VR-Ls)	cmalsiB323
CmaCh16G002230	Cucumber (Gy14) v2	cgybcmaB493
CmaCh16G002230	Melon (DHL92) v3.6.1	cmamedB355
CmaCh16G002230	Silver-seed gourd	carcmaB0526
CmaCh16G002230	Silver-seed gourd	carcmaB0995
CmaCh16G002230	Silver-seed gourd	carcmaB1206